AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0387260

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0387260 MtrunA17_Chr3g0139891 93.966 696 13 4 1 695 1 668 0.0 1310
Msa0387260 MtrunA17_Chr1g0157701 67.131 718 162 12 1 693 1 669 0.0 905
Msa0387260 MtrunA17_Chr3g0125541 54.167 288 104 2 7 294 10 269 7.98e-95 302
Msa0387260 MtrunA17_Chr7g0244381 42.903 310 143 3 7 311 15 295 1.00e-81 274
Msa0387260 MtrunA17_Chr3g0131021 36.667 300 155 4 1 296 1 269 2.75e-51 185
Msa0387260 MtrunA17_Chr8g0385261 35.082 305 163 4 1 300 1 275 5.58e-48 174
Msa0387260 MtrunA17_Chr5g0395341 30.241 291 171 9 2 289 48 309 2.20e-29 120
Msa0387260 MtrunA17_Chr7g0261361 26.706 337 188 13 5 319 41 340 6.72e-18 86.7
Msa0387260 MtrunA17_Chr4g0039841 32.000 300 161 12 5 289 78 349 7.82e-18 86.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0387260 AT4G32760.1 55.810 568 170 13 1 545 1 510 0.0 558
Msa0387260 AT4G32760.2 55.712 569 170 14 1 545 1 511 0.0 553
Msa0387260 AT4G32760.3 58.039 510 144 10 1 497 1 453 0.0 532
Msa0387260 AT3G08790.1 43.978 714 256 24 1 687 1 597 2.55e-161 478
Msa0387260 AT1G21380.1 45.918 392 148 9 7 388 10 347 1.78e-97 310
Msa0387260 AT1G76970.2 53.103 290 100 4 7 295 10 264 4.42e-94 299
Msa0387260 AT1G76970.3 53.103 290 100 4 7 295 10 264 4.42e-94 299
Msa0387260 AT1G76970.6 53.103 290 100 4 7 295 10 264 4.42e-94 299
Msa0387260 AT1G76970.1 53.103 290 100 4 7 295 10 264 4.42e-94 299
Msa0387260 AT1G76970.7 56.327 245 94 3 52 295 6 238 1.23e-82 268
Msa0387260 AT1G76970.4 56.327 245 94 3 52 295 6 238 1.23e-82 268
Msa0387260 AT2G38410.1 41.212 330 128 5 7 293 13 319 2.29e-70 242
Msa0387260 AT5G01760.1 39.731 297 151 4 2 295 22 293 6.35e-66 227
Msa0387260 AT1G76970.5 56.915 188 68 3 109 295 1 176 8.07e-61 208
Msa0387260 AT5G63640.1 36.986 292 159 3 1 292 1 267 2.37e-54 193
Msa0387260 AT5G63640.2 36.986 292 159 3 1 292 1 267 2.37e-54 193
Msa0387260 AT5G16880.4 30.519 308 162 11 2 294 48 318 2.43e-31 127
Msa0387260 AT5G16880.1 30.519 308 162 11 2 294 48 318 2.43e-31 127
Msa0387260 AT5G16880.2 30.519 308 162 11 2 294 48 318 2.43e-31 127
Msa0387260 AT5G16880.3 30.496 282 148 10 3 272 49 294 1.11e-27 114
Msa0387260 AT1G06210.1 28.146 302 160 13 5 286 41 305 1.36e-18 89.0

Find 233 sgRNAs with CRISPR-Local

Find 568 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAACCAGAGGATAAGTTATT+TGG 0.124259 3_1:-91159903 Msa0387260:CDS
CAGCCACTTTCACCTGTTTA+TGG 0.126297 3_1:-91160697 Msa0387260:intron
GAATTCCGTTGAGGTAAATT+TGG 0.149170 3_1:+91167230 None:intergenic
TGATAGTTTGTTGTTGAAAT+TGG 0.154844 3_1:+91160848 None:intergenic
CTCGGGCCTGGAGTGGATTT+TGG 0.162976 3_1:+91159852 None:intergenic
CAAGCAAAGCATATTGTTAA+AGG 0.195069 3_1:-91165922 Msa0387260:CDS
TGGTTTGGAAGGCGGCTTTC+CGG 0.226834 3_1:+91159920 None:intergenic
TCAGAATGCACGTGGTATTA+TGG 0.256558 3_1:-91162603 Msa0387260:CDS
GCAAGTGAATTATCTGCTTT+TGG 0.287886 3_1:+91160994 None:intergenic
TTTGCAGCCTCCGTATATTC+AGG 0.289691 3_1:-91160183 Msa0387260:CDS
AACACGTGGAGTGTTATTAT+TGG 0.291754 3_1:-91167285 Msa0387260:five_prime_UTR
GAATGCTCTAATGGTCCTTT+TGG 0.294158 3_1:+91166248 None:intergenic
CATAGCCATATCCCATAAAT+TGG 0.296109 3_1:+91160072 None:intergenic
GGGTGTTGCAGGTCCTTATA+TGG 0.299157 3_1:-91160162 Msa0387260:CDS
AAATGGCAAACAAGTGAAAA+AGG 0.308784 3_1:+91159794 None:intergenic
TTTATTTAATAAGCAAATAA+TGG 0.315248 3_1:+91167329 None:intergenic
GATGTATGGTAACCAATTTA+TGG 0.321411 3_1:-91160084 Msa0387260:CDS
GATACTTGGCAAGAAGCTTT+TGG 0.325571 3_1:-91165210 Msa0387260:CDS
CCGTATATTCAGGGTGTTGC+AGG 0.327653 3_1:-91160173 Msa0387260:CDS
ACTTCCTCATTGGTCCTGAT+TGG 0.330988 3_1:-91167017 Msa0387260:CDS
AAAATGTAGGTATATATTAC+AGG 0.332938 3_1:+91159629 None:intergenic
ACCACTGAGCAGATCCCATT+TGG 0.333883 3_1:+91161032 None:intergenic
GATAGTTTGTTGTTGAAATT+GGG 0.336251 3_1:+91160849 None:intergenic
TGCGGAACCATGCCCATATA+AGG 0.336698 3_1:+91160149 None:intergenic
GCAGGAAGTTATTGTTGATT+TGG 0.338111 3_1:-91162361 Msa0387260:CDS
GGTAACCAATTTATGGGATA+TGG 0.339100 3_1:-91160077 Msa0387260:CDS
CTTCCTCATTGGTCCTGATT+GGG 0.345721 3_1:-91167016 Msa0387260:CDS
AACCAGAGGATAAGTTATTT+GGG 0.347303 3_1:-91159902 Msa0387260:CDS
ACCACGTGCATTCTGAATTT+CGG 0.354749 3_1:+91162610 None:intergenic
GCTCCACTAGGTTCAGGATT+TGG 0.354891 3_1:+91161987 None:intergenic
TCCACTGAGGACTCAGCTTC+CGG 0.363196 3_1:+91163570 None:intergenic
CTTCTCTCGGACATGATAAT+CGG 0.364013 3_1:+91165248 None:intergenic
GATGGTCCTTTGATTGATAC+TGG 0.364838 3_1:-91161951 Msa0387260:CDS
CTGCACAACCTGACCATTCC+AGG 0.370652 3_1:+91160732 None:intergenic
ATAAACTTGGTCGGCATAGC+TGG 0.376456 3_1:-91167311 Msa0387260:five_prime_UTR
AAATAACTTATCCTCTGGTT+TGG 0.380511 3_1:+91159905 None:intergenic
GGCAGAGAAACAAAACAATA+TGG 0.381652 3_1:+91159696 None:intergenic
CCAGGTTCAAAGTAACCAAT+TGG 0.383361 3_1:-91160207 Msa0387260:CDS
AACAGCAGCTCCCGAAGAAA+TGG 0.383599 3_1:+91162028 None:intergenic
AACAGCAGCTCCCGATGAAA+TGG 0.383599 3_1:+91162070 None:intergenic
AATTCCGTTGAGGTAAATTT+GGG 0.386793 3_1:+91167231 None:intergenic
CCTGCAACACCCTGAATATA+CGG 0.393117 3_1:+91160173 None:intergenic
CAAGCATGAATCCATTTCTT+CGG 0.406373 3_1:-91162039 Msa0387260:CDS
TACTGGCTCTTATTGATACT+TGG 0.408389 3_1:-91165224 Msa0387260:CDS
CAGTGAAGGTTGATCCCAAA+TGG 0.409314 3_1:-91161047 Msa0387260:CDS
TGTTGAAATTGGGGAGCTAT+TGG 0.413408 3_1:+91160859 None:intergenic
CCTCAAGGACCTCAAGCAAC+CGG 0.414607 3_1:-91160293 Msa0387260:CDS
GACCATTAGAGCATTCGTTC+AGG 0.417416 3_1:-91166241 Msa0387260:intron
CATTAGGCATACTTCCATTC+GGG 0.418856 3_1:+91160806 None:intergenic
ATGTATGGTAACCAATTTAT+GGG 0.419270 3_1:-91160083 Msa0387260:CDS
GCTATTGGCTGGGTATTAAC+AGG 0.423010 3_1:+91160874 None:intergenic
CATCTTACTTCTTTGTTACC+AGG 0.423970 3_1:+91162548 None:intergenic
TGCCAACCGGCGATAGATTT+AGG 0.424955 3_1:-91159677 Msa0387260:three_prime_UTR
CCCAATGGTTGTGTTTGTAC+TGG 0.428187 3_1:+91163633 None:intergenic
GGTTATTGATTGAAGAGAAA+TGG 0.429629 3_1:+91160228 None:intergenic
AGACAATCATAAAGAATTGC+GGG 0.431453 3_1:-91165438 Msa0387260:CDS
GAAGAGAAATGGCTAGCATT+TGG 0.431656 3_1:+91160239 None:intergenic
TACCTGAACGAATGCTCTAA+TGG 0.434363 3_1:+91166239 None:intergenic
CATTTGGGATCAACCTTCAC+TGG 0.435486 3_1:+91161048 None:intergenic
CCAATTGGTTACTTTGAACC+TGG 0.436130 3_1:+91160207 None:intergenic
ATAAGTGCTCCACTAGGTTC+AGG 0.438996 3_1:+91161981 None:intergenic
ACATTAGGCATACTTCCATT+CGG 0.446912 3_1:+91160805 None:intergenic
GTTTGTACTGGTGTGAATAC+AGG 0.449494 3_1:+91163645 None:intergenic
TCCCCAAATAACTTATCCTC+TGG 0.451046 3_1:+91159900 None:intergenic
CCACTGAGCAGATCCCATTT+GGG 0.453424 3_1:+91161033 None:intergenic
AAGGGCTATCAGCTCGGGCC+TGG 0.454477 3_1:+91159840 None:intergenic
GTTCCGCATCAAATGCAAAA+TGG 0.454661 3_1:-91160134 Msa0387260:CDS
ATATACGTGATTCTGATTCT+CGG 0.454848 3_1:-91163596 Msa0387260:CDS
CCATTATTAGAGTTGCTTTG+AGG 0.458524 3_1:-91166298 Msa0387260:intron
CAGCAACAGCAACAGCAACA+AGG 0.460459 3_1:-91160041 Msa0387260:CDS
ATTTGCTTATTAAATAAACT+TGG 0.462242 3_1:-91167324 Msa0387260:five_prime_UTR
GCATTAAGCACACCATAAAC+AGG 0.464450 3_1:+91160685 None:intergenic
GGAAGTTATTGTTGATTTGG+TGG 0.464730 3_1:-91162358 Msa0387260:CDS
TCGAGATTCAAAGCCCAATC+AGG 0.464752 3_1:+91167003 None:intergenic
CTCAAAACACAGGTCCTGCC+TGG 0.465691 3_1:-91160750 Msa0387260:CDS
AAGCATGAATCCATTTCTTC+GGG 0.465734 3_1:-91162038 Msa0387260:CDS
TGATTCTGATTCTCGGCAAC+CGG 0.466193 3_1:-91163589 Msa0387260:CDS
CTGGCAGGCTGTTGTTCTAC+AGG 0.466956 3_1:+91160964 None:intergenic
TTGAATTTCCCAAGGAGGAG+GGG 0.471155 3_1:+91160400 None:intergenic
CATCATTAAGCGCTAGTCCT+TGG 0.472343 3_1:+91162123 None:intergenic
TTCTCTCGGACATGATAATC+GGG 0.474507 3_1:+91165249 None:intergenic
ACCGGGTATGACCAGGCTGC+TGG 0.476987 3_1:-91160275 Msa0387260:CDS
TCATCTTCTAGTGCTGAAGC+AGG 0.477288 3_1:-91161132 Msa0387260:CDS
CAGGTTCAAAGTAACCAATT+GGG 0.478110 3_1:-91160206 Msa0387260:CDS
ACCAGTACAAACACAACCAT+TGG 0.480297 3_1:-91163634 Msa0387260:CDS
TTTGTAAGGGCTATCAGCTC+GGG 0.481803 3_1:+91159835 None:intergenic
AAGCATGAATCCATTTCATC+GGG 0.482786 3_1:-91162080 Msa0387260:CDS
GCAGATTGCTCAGATCTTGA+AGG 0.482916 3_1:+91163669 None:intergenic
CCTGCACCCTCTACATCAAA+TGG 0.483843 3_1:-91161081 Msa0387260:CDS
CAAGCATGAATCCATTTCAT+CGG 0.483907 3_1:-91162081 Msa0387260:CDS
CTGTGACTTGCACTGGCTGC+GGG 0.488265 3_1:+91160339 None:intergenic
GATGTACTCAATCGTGATCC+CGG 0.488695 3_1:-91166973 Msa0387260:CDS
ACGGAGGCTGCAAACCCAAT+TGG 0.489405 3_1:+91160192 None:intergenic
CGATGAAATGGATTCATGCT+TGG 0.493261 3_1:+91162082 None:intergenic
AAAGGTTTAAAGAAGCGGAT+TGG 0.493279 3_1:-91165904 Msa0387260:CDS
TACCGAGGTGACCCCACATT+AGG 0.493533 3_1:+91160790 None:intergenic
CATAAGATGCAGCAGAAACC+TGG 0.494461 3_1:+91159949 None:intergenic
ATGCTCACTGCTTTAGAGCC+TGG 0.495603 3_1:-91162566 Msa0387260:CDS
AACTGCGATGGTGAATCCTT+TGG 0.495929 3_1:-91167058 Msa0387260:exon
GCCACCAGCGACTTCCTCAT+TGG 0.496410 3_1:-91167027 Msa0387260:CDS
AGCAACAGCAACAGCAACAA+GGG 0.497781 3_1:-91160040 Msa0387260:CDS
GGTTGAATTTCCCAAGGAGG+AGG 0.498498 3_1:+91160398 None:intergenic
TGCAGGTCCTTATATGGGCA+TGG 0.498686 3_1:-91160156 Msa0387260:CDS
TGAATTTCCCAAGGAGGAGG+GGG 0.499455 3_1:+91160401 None:intergenic
GCTGCATCTTATGCGCCATC+CGG 0.500035 3_1:-91159939 Msa0387260:CDS
TGCTGCCTACCAGGAACTGC+TGG 0.500884 3_1:-91165157 Msa0387260:intron
TCATGTCCGAGAGAAGATAC+TGG 0.501529 3_1:-91165241 Msa0387260:CDS
GAAATTGGGGAGCTATTGGC+TGG 0.502387 3_1:+91160863 None:intergenic
TATATCGAGCAGCAAATGTA+TGG 0.503614 3_1:-91160011 Msa0387260:CDS
GGCTGGGTATTAACAGGAGT+TGG 0.506116 3_1:+91160880 None:intergenic
ATGTATCCTCAACAGATGTA+TGG 0.507691 3_1:-91160098 Msa0387260:CDS
TTGCAGCCTCCGTATATTCA+GGG 0.508667 3_1:-91160182 Msa0387260:CDS
AGGTCCTGCCTGGAATGGTC+AGG 0.512257 3_1:-91160740 Msa0387260:CDS
CTATCAGCTCGGGCCTGGAG+TGG 0.512288 3_1:+91159845 None:intergenic
CCATTAGAAAACAAATCAAA+AGG 0.512332 3_1:+91160913 None:intergenic
GGAGCACTTATAGATGTTGA+TGG 0.512452 3_1:-91161969 Msa0387260:CDS
AACTTATCCTCTGGTTTGGA+AGG 0.514136 3_1:+91159909 None:intergenic
TGTTGAGACACAGGACTGGC+AGG 0.516466 3_1:+91160949 None:intergenic
GGGTATTGACTGCCAGCTAC+TGG 0.517236 3_1:+91160359 None:intergenic
ACTTCTATGTTTAGGGGCTC+CGG 0.517634 3_1:-91162383 Msa0387260:intron
GGTGAAAATAGTAAAGAAGA+AGG 0.518455 3_1:-91165368 Msa0387260:intron
CCATTTGATGTAGAGGGTGC+AGG 0.521544 3_1:+91161081 None:intergenic
ATACATCTGTTGAGGATACA+TGG 0.521773 3_1:+91160100 None:intergenic
AGGTAAATTTGGGACAAGGG+TGG 0.522456 3_1:+91167241 None:intergenic
ACAGTATTATGCTGCCTACC+AGG 0.523127 3_1:-91165166 Msa0387260:CDS
GCTTATTAAATAAACTTGGT+CGG 0.523425 3_1:-91167320 Msa0387260:five_prime_UTR
AGGCTGAGTTTCCAACCCTT+AGG 0.523596 3_1:-91163548 Msa0387260:intron
CAATTTATGGGATATGGCTA+TGG 0.527206 3_1:-91160071 Msa0387260:CDS
TTGGAAGGCGGCTTTCCGGA+TGG 0.527600 3_1:+91159924 None:intergenic
ATTTGCTGCTCGATATATTG+AGG 0.531229 3_1:+91160017 None:intergenic
TTATCCTCTGGTTTGGAAGG+CGG 0.532994 3_1:+91159912 None:intergenic
ACATGTACTGTGACTTGCAC+TGG 0.533492 3_1:+91160332 None:intergenic
TGAGAGATAGATAGAAAGAG+AGG 0.533595 3_1:-91167167 Msa0387260:five_prime_UTR
GCATATACATTCCAGCAGCC+TGG 0.534083 3_1:+91160264 None:intergenic
GAGGCAGACGCCGTTCCAAA+AGG 0.537307 3_1:-91166263 Msa0387260:CDS
AGCTGAACCATTTGATGTAG+AGG 0.537424 3_1:+91161074 None:intergenic
GGTGTTGCAGGTCCTTATAT+GGG 0.537499 3_1:-91160161 Msa0387260:CDS
GACAATGGTAGTCCAGTAGC+TGG 0.538228 3_1:-91160371 Msa0387260:CDS
GTTGAATTTCCCAAGGAGGA+GGG 0.538979 3_1:+91160399 None:intergenic
GATAACGTACCAGCAGTTCC+TGG 0.540934 3_1:+91165148 None:intergenic
ACTGTGACTTGCACTGGCTG+CGG 0.541717 3_1:+91160338 None:intergenic
CCAGTACAAACACAACCATT+GGG 0.547497 3_1:-91163633 Msa0387260:CDS
TGCTCAGATCTTGAAGGGAA+CGG 0.547545 3_1:+91163675 None:intergenic
ACACCATAAACAGGTGAAAG+TGG 0.547806 3_1:+91160694 None:intergenic
TGGTCATACCCGGTTGCTTG+AGG 0.547959 3_1:+91160284 None:intergenic
TTGTTAAAGGTTTAAAGAAG+CGG 0.548851 3_1:-91165909 Msa0387260:CDS
AAGTGTTTGATCGATTCTCT+TGG 0.552619 3_1:-91167084 Msa0387260:five_prime_UTR
CTCAAGGACCTCAAGCAACC+GGG 0.558195 3_1:-91160292 Msa0387260:CDS
TGCTTGAGGTCCTTGAGGAA+AGG 0.559727 3_1:+91160298 None:intergenic
GAATGGAAGTATGCCTAATG+TGG 0.560091 3_1:-91160803 Msa0387260:CDS
CTATGTTTAGGGGCTCCGGC+AGG 0.560292 3_1:-91162379 Msa0387260:intron
AGTGAAGGTTGATCCCAAAT+GGG 0.560648 3_1:-91161046 Msa0387260:CDS
TCCAGCAGCCTGGTCATACC+CGG 0.565437 3_1:+91160274 None:intergenic
AGAGAGATGTACCTAAGGGT+TGG 0.566635 3_1:+91163537 None:intergenic
TATAGTGATTGCTCGTACCG+AGG 0.568798 3_1:+91160775 None:intergenic
AACACAGGTCCTGCCTGGAA+TGG 0.569316 3_1:-91160745 Msa0387260:CDS
TGGTTACCATACATCTGTTG+AGG 0.570071 3_1:+91160092 None:intergenic
CTTACGAAGTTGAATTAACA+AGG 0.570283 3_1:+91162301 None:intergenic
TTATAGCCTAAATCTATCGC+CGG 0.570429 3_1:+91159671 None:intergenic
CTCATGAAGAACCTCTCTCT+CGG 0.570668 3_1:+91165393 None:intergenic
TTTCTCTTCAATCAATAACC+AGG 0.571915 3_1:-91160225 Msa0387260:CDS
CTGGTGGCACGTTCAACCAA+AGG 0.573807 3_1:+91167042 None:intergenic
TCAAGCAACCGGGTATGACC+AGG 0.575154 3_1:-91160282 Msa0387260:CDS
CATGCATGTTGCCGAGAGAG+AGG 0.577057 3_1:-91165404 Msa0387260:CDS
TAAGAGCCAGTATCTTCTCT+CGG 0.577061 3_1:+91165235 None:intergenic
GAGAGAGGTTCTTCATGAGA+TGG 0.577200 3_1:-91165389 Msa0387260:CDS
GTGAAACCAAAATCCACTCC+AGG 0.579035 3_1:-91159858 Msa0387260:CDS
TGCTTCAAGAAATCCTTACC+AGG 0.579404 3_1:-91159967 Msa0387260:CDS
AGCCTAAATCTATCGCCGGT+TGG 0.580579 3_1:+91159675 None:intergenic
ACGCACACACACAAAGAAGA+TGG 0.581081 3_1:+91167196 None:intergenic
CAAACTGCTGCCTTTCCTCA+AGG 0.584269 3_1:-91160308 Msa0387260:CDS
GATGCAGCAGAAACCTGGTA+AGG 0.584332 3_1:+91159954 None:intergenic
CAACAAACTATCATATCTCA+AGG 0.585121 3_1:-91160838 Msa0387260:CDS
TTCTCTTGGTGAAACTGCGA+TGG 0.585740 3_1:-91167070 Msa0387260:exon
GTTGAGGTAAATTTGGGACA+AGG 0.587884 3_1:+91167237 None:intergenic
AATGGAAGTATGCCTAATGT+GGG 0.588245 3_1:-91160802 Msa0387260:CDS
ATGTACTCAATCGTGATCCC+GGG 0.588474 3_1:-91166972 Msa0387260:intron
CAGATTGCTCAGATCTTGAA+GGG 0.590037 3_1:+91163670 None:intergenic
CTCTCTCGGCAACATGCATG+TGG 0.593244 3_1:+91165407 None:intergenic
TGGTTCAGCTCCTCCAGTGA+AGG 0.594973 3_1:-91161061 Msa0387260:CDS
AAACAAATCAAAAGGAACAA+GGG 0.598241 3_1:+91160921 None:intergenic
TCTGCAGGTTGAATTTCCCA+AGG 0.598478 3_1:+91160392 None:intergenic
ACTGGACTACCATTGTCTGC+AGG 0.600277 3_1:+91160377 None:intergenic
ATAGTTTGTTGTTGAAATTG+GGG 0.600673 3_1:+91160850 None:intergenic
AGGACCAATGAGGAAGTCGC+TGG 0.600810 3_1:+91167023 None:intergenic
GCTGAACCATTTGATGTAGA+GGG 0.603821 3_1:+91161075 None:intergenic
AGGGCATTCTGTTGAGACAC+AGG 0.605690 3_1:+91160940 None:intergenic
TTGTCCCAAATTTACCTCAA+CGG 0.609893 3_1:-91167235 Msa0387260:five_prime_UTR
GAGACAATCATAAAGAATTG+CGG 0.612215 3_1:-91165439 Msa0387260:CDS
AATCAACAATAACTTCCTGC+CGG 0.613189 3_1:+91162364 None:intergenic
GCTGTTGTTCTACAGGAACA+AGG 0.614193 3_1:+91160971 None:intergenic
GTATCTCCAGTATCAATCAA+AGG 0.615345 3_1:+91161945 None:intergenic
TGCCTAATGTGGGGTCACCT+CGG 0.615879 3_1:-91160792 Msa0387260:CDS
TTGAGGTAAATTTGGGACAA+GGG 0.618213 3_1:+91167238 None:intergenic
TGAGGATACATGGAAGCCAC+AGG 0.621883 3_1:+91160110 None:intergenic
AAAACAAATCAAAAGGAACA+AGG 0.622707 3_1:+91160920 None:intergenic
TTGGGATCAACCTTCACTGG+AGG 0.627110 3_1:+91161051 None:intergenic
TTGCATACAGGTACACAAAG+TGG 0.629394 3_1:-91160434 Msa0387260:intron
ATTCTGTTGAGACACAGGAC+TGG 0.630325 3_1:+91160945 None:intergenic
ACCAGAGGATAAGTTATTTG+GGG 0.632546 3_1:-91159901 Msa0387260:CDS
AAATGTAGGTATATATTACA+GGG 0.632752 3_1:+91159630 None:intergenic
ACAACCTGACCATTCCAGGC+AGG 0.633653 3_1:+91160736 None:intergenic
AAATTGGGGAGCTATTGGCT+GGG 0.637244 3_1:+91160864 None:intergenic
ACATCTATAAGTGCTCCACT+AGG 0.638431 3_1:+91161975 None:intergenic
TCACTATATACTCAAAACAC+AGG 0.644749 3_1:-91160760 Msa0387260:CDS
ACCAATGAGGAAGTCGCTGG+TGG 0.647201 3_1:+91167026 None:intergenic
TCAAATGCAAAATGGTCCTG+TGG 0.648758 3_1:-91160126 Msa0387260:CDS
AACTCAACTGAATTCCGTTG+AGG 0.648784 3_1:+91167221 None:intergenic
GAAATTCAACCTGCAGACAA+TGG 0.649172 3_1:-91160386 Msa0387260:CDS
GGAAGCTGAGTCCTCAGTGG+AGG 0.650591 3_1:-91163568 Msa0387260:CDS
ACGTACCAGCAGTTCCTGGT+AGG 0.657323 3_1:+91165152 None:intergenic
CATCTTCTAGTGCTGAAGCA+GGG 0.658549 3_1:-91161131 Msa0387260:CDS
CTGTTGTTCTACAGGAACAA+GGG 0.660835 3_1:+91160972 None:intergenic
GATGAGTCACTTCTATGCCA+AGG 0.664596 3_1:-91162140 Msa0387260:CDS
ACCGGAAGCTGAGTCCTCAG+TGG 0.665226 3_1:-91163571 Msa0387260:CDS
AAGCCCAATCAGGACCAATG+AGG 0.665741 3_1:+91167013 None:intergenic
CCGGTTGCTTGAGGTCCTTG+AGG 0.666770 3_1:+91160293 None:intergenic
TTTCTTTGATCGTTGCAACG+TGG 0.669742 3_1:-91167109 Msa0387260:five_prime_UTR
AAACCAAATCCTGAACCTAG+TGG 0.679490 3_1:-91161990 Msa0387260:CDS
GGCATAGCTGGACAAACACG+TGG 0.681772 3_1:-91167299 Msa0387260:five_prime_UTR
TTTGAGGCGCGATAAATGTG+AGG 0.682676 3_1:-91166282 Msa0387260:CDS
CTAGTAAACAAACTGATGCG+AGG 0.685460 3_1:-91161923 Msa0387260:intron
TCGCACATACAAGCAAAGAG+TGG 0.688157 3_1:-91162328 Msa0387260:CDS
ACCGAAATTCAGAATGCACG+TGG 0.690965 3_1:-91162611 Msa0387260:CDS
GACAATCATAAAGAATTGCG+GGG 0.693473 3_1:-91165437 Msa0387260:CDS
GCAGGTTGAATTTCCCAAGG+AGG 0.701517 3_1:+91160395 None:intergenic
GCAACACCCTGAATATACGG+AGG 0.711843 3_1:+91160176 None:intergenic
TGGTAGGCAGCATAATACTG+TGG 0.712731 3_1:+91165168 None:intergenic
ATGGAAGTATGCCTAATGTG+GGG 0.715188 3_1:-91160801 Msa0387260:CDS
CATACAGGTACACAAAGTGG+CGG 0.720999 3_1:-91160431 Msa0387260:intron
AAAGCCGCCTTCCAAACCAG+AGG 0.725364 3_1:-91159916 Msa0387260:CDS
CCCAAATGGGATCTGCTCAG+TGG 0.742827 3_1:-91161033 Msa0387260:CDS
TGGAAACTCAGCCTCCACTG+AGG 0.759711 3_1:+91163557 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTTATTTAATAAGCAAATAA+TGG + chr3_1:91159662-91159681 None:intergenic 10.0%
!!! AATTAGAATACTTTTTTTAT+TGG - chr3_1:91161499-91161518 Msa0387260:intron 10.0%
!! ACATATTCAAAAAAAAAAAA+CGG + chr3_1:91164556-91164575 None:intergenic 10.0%
!! AAAAAACTAGTTATTATTTA+TGG - chr3_1:91164809-91164828 Msa0387260:intron 10.0%
!! ATTTGCTTATTAAATAAACT+TGG - chr3_1:91159664-91159683 Msa0387260:three_prime_UTR 15.0%
!! ATAAGATTAATTTCAATCTT+GGG + chr3_1:91162054-91162073 None:intergenic 15.0%
!! ATCTTCATATCTTTATTATA+TGG - chr3_1:91163574-91163593 Msa0387260:CDS 15.0%
!! ACAAACAATAAATATGAAAA+TGG + chr3_1:91163824-91163843 None:intergenic 15.0%
!! TCAAAACATTCAATATTATT+CGG + chr3_1:91164232-91164251 None:intergenic 15.0%
!!! ATAATAACTAGTTTTTTCTT+TGG + chr3_1:91164806-91164825 None:intergenic 15.0%
!! GAATTACTTGAATTATAATT+GGG + chr3_1:91165169-91165188 None:intergenic 15.0%
!! TGAATTACTTGAATTATAAT+TGG + chr3_1:91165170-91165189 None:intergenic 15.0%
!!! TAATTTATTTTGGATTGTTA+GGG - chr3_1:91165401-91165420 Msa0387260:CDS 15.0%
!!! TGAAAAATGAATTTTAGTAA+GGG - chr3_1:91165576-91165595 Msa0387260:intron 15.0%
!! AGAATAATGAAGAAAAAAAA+TGG + chr3_1:91167214-91167233 None:intergenic 15.0%
!!! TTAATTCTAAGAGATAATCT+AGG - chr3_1:91162024-91162043 Msa0387260:CDS 20.0%
!! TAAGATTAATTTCAATCTTG+GGG + chr3_1:91162053-91162072 None:intergenic 20.0%
!! CATAAGATTAATTTCAATCT+TGG + chr3_1:91162055-91162074 None:intergenic 20.0%
!!! GATATTTTTTAGAATGTCTT+CGG + chr3_1:91162084-91162103 None:intergenic 20.0%
!!! CATCTTTTAAAAGACAAAAA+TGG - chr3_1:91162183-91162202 Msa0387260:intron 20.0%
!!! TTGTAAGATTTTAGATTAAC+AGG - chr3_1:91162817-91162836 Msa0387260:intron 20.0%
!!! TGTAAGATTTTAGATTAACA+GGG - chr3_1:91162818-91162837 Msa0387260:intron 20.0%
!! TCTTGTATCTGAATAAATAA+AGG + chr3_1:91162915-91162934 None:intergenic 20.0%
!!! AAGTTTTATGCAAATATTCT+GGG + chr3_1:91163224-91163243 None:intergenic 20.0%
!!! AAAGTTTTATGCAAATATTC+TGG + chr3_1:91163225-91163244 None:intergenic 20.0%
!! CATCTCTTTAATTCTATAAA+TGG - chr3_1:91163265-91163284 Msa0387260:intron 20.0%
!! AACTGAAAAAATAATATGCA+AGG + chr3_1:91163730-91163749 None:intergenic 20.0%
!! CTTGTTCAAAAAATGATTTA+GGG + chr3_1:91164005-91164024 None:intergenic 20.0%
!!! AGGTTAAGTTATTAGATTTT+GGG + chr3_1:91164035-91164054 None:intergenic 20.0%
!!! AAGGTTAAGTTATTAGATTT+TGG + chr3_1:91164036-91164055 None:intergenic 20.0%
!! AAATCTAATAACTTAACCTT+TGG - chr3_1:91164036-91164055 Msa0387260:intron 20.0%
!! AATCTAATAACTTAACCTTT+GGG - chr3_1:91164037-91164056 Msa0387260:intron 20.0%
!! TTATCAGTAATAACTATTAG+AGG - chr3_1:91164111-91164130 Msa0387260:intron 20.0%
!!! TTTTTACAACACACTATTAT+TGG - chr3_1:91164146-91164165 Msa0387260:intron 20.0%
!! ATGATAAACATTATTCTTTG+TGG - chr3_1:91164291-91164310 Msa0387260:intron 20.0%
!!! AGTTCTGTTCTAATTTATTT+TGG - chr3_1:91165391-91165410 Msa0387260:CDS 20.0%
!!! CTAATTTATTTTGGATTGTT+AGG - chr3_1:91165400-91165419 Msa0387260:CDS 20.0%
!! TAAAACTTGAAAATCAAAAC+AGG + chr3_1:91165472-91165491 None:intergenic 20.0%
!!! CTGAAAAATGAATTTTAGTA+AGG - chr3_1:91165575-91165594 Msa0387260:intron 20.0%
!! AATAGAACATAATTGTGAAA+GGG + chr3_1:91166362-91166381 None:intergenic 20.0%
!! ATGAAAAATTTGCAAATCTT+TGG - chr3_1:91166430-91166449 Msa0387260:intron 20.0%
!!! TTTTTTTTATTCTTGCATAC+AGG - chr3_1:91166542-91166561 Msa0387260:intron 20.0%
!!! AACAAATCATAGTTTTGTAA+GGG + chr3_1:91167169-91167188 None:intergenic 20.0%
!!! AAACAAATCATAGTTTTGTA+AGG + chr3_1:91167170-91167189 None:intergenic 20.0%
! GCTTATTAAATAAACTTGGT+CGG - chr3_1:91159668-91159687 Msa0387260:three_prime_UTR 25.0%
! AAGAAGAAGAAGATTTGAAA+TGG + chr3_1:91160070-91160089 None:intergenic 25.0%
!!! ATTCCTTTGATTTTCTTGTA+TGG - chr3_1:91160169-91160188 Msa0387260:CDS 25.0%
! TTTAGATTGTTTGATCAATC+AGG - chr3_1:91160318-91160337 Msa0387260:CDS 25.0%
! TTAGATTGTTTGATCAATCA+GGG - chr3_1:91160319-91160338 Msa0387260:CDS 25.0%
! TCAAGTTATGTATCAAAGTT+TGG - chr3_1:91160796-91160815 Msa0387260:CDS 25.0%
! CAAGTTATGTATCAAAGTTT+GGG - chr3_1:91160797-91160816 Msa0387260:CDS 25.0%
! GAAATACTACATTCATACAT+GGG + chr3_1:91160826-91160845 None:intergenic 25.0%
! AGAAATACTACATTCATACA+TGG + chr3_1:91160827-91160846 None:intergenic 25.0%
!! TGTTTTATGTCTTCTACTAT+TGG - chr3_1:91160849-91160868 Msa0387260:CDS 25.0%
!! GTTTTATGTCTTCTACTATT+GGG - chr3_1:91160850-91160869 Msa0387260:CDS 25.0%
! AACGTGAACATGTAAAAATT+GGG + chr3_1:91160893-91160912 None:intergenic 25.0%
! AAACGTGAACATGTAAAAAT+TGG + chr3_1:91160894-91160913 None:intergenic 25.0%
!!! AGCTGAATGTTTATTTTCTT+TGG - chr3_1:91160941-91160960 Msa0387260:CDS 25.0%
! TTGTTAAAGGTTTAAAGAAG+CGG - chr3_1:91161079-91161098 Msa0387260:CDS 25.0%
! ATTGAACAATGTTAAGATCT+GGG + chr3_1:91161181-91161200 None:intergenic 25.0%
! TATTCATCTTGTATTCTTTG+TGG - chr3_1:91161416-91161435 Msa0387260:intron 25.0%
! CTAATTGTTAAAGATGATAG+AGG + chr3_1:91161485-91161504 None:intergenic 25.0%
! AAGACTTAAACTCTTGAATA+TGG - chr3_1:91161959-91161978 Msa0387260:CDS 25.0%
! TAAACTCTTGAATATGGTTT+AGG - chr3_1:91161965-91161984 Msa0387260:CDS 25.0%
! TGATATGATGTGATACAAAA+AGG - chr3_1:91161993-91162012 Msa0387260:CDS 25.0%
!!! TGTAATAAGCTTTAACTTGA+GGG + chr3_1:91162145-91162164 None:intergenic 25.0%
!!! TTGTAATAAGCTTTAACTTG+AGG + chr3_1:91162146-91162165 None:intergenic 25.0%
!!! AAAGAAACACGTCTTATTTT+AGG - chr3_1:91162327-91162346 Msa0387260:CDS 25.0%
! TTGTATTCAAAAACCTTTCT+TGG + chr3_1:91162738-91162757 None:intergenic 25.0%
! GTATCTGAATAAATAAAGGT+CGG + chr3_1:91162911-91162930 None:intergenic 25.0%
! TACAAATCCTAATTTAAGAG+AGG - chr3_1:91162936-91162955 Msa0387260:intron 25.0%
! ACAAATCCTAATTTAAGAGA+GGG - chr3_1:91162937-91162956 Msa0387260:intron 25.0%
!! GTTATTTCATTTCATCTTAG+AGG + chr3_1:91163032-91163051 None:intergenic 25.0%
! CTTAGATTATCTAATCTCAT+AGG + chr3_1:91163059-91163078 None:intergenic 25.0%
!! GAAAATATCTTTTAGTACCT+TGG + chr3_1:91163098-91163117 None:intergenic 25.0%
!! CATCCTTTTATATGATAACA+CGG + chr3_1:91163477-91163496 None:intergenic 25.0%
! ATCTACACAGATAATGAATA+TGG + chr3_1:91163644-91163663 None:intergenic 25.0%
!! GTTCTGTTTCATTTTGTATT+TGG - chr3_1:91163699-91163718 Msa0387260:intron 25.0%
! TTGGAAGATCAATATGTAAT+TGG - chr3_1:91163870-91163889 Msa0387260:intron 25.0%
! CTTAAGAAATGCTTGTATAT+GGG - chr3_1:91163932-91163951 Msa0387260:intron 25.0%
! GCTTGTTCAAAAAATGATTT+AGG + chr3_1:91164006-91164025 None:intergenic 25.0%
!! TTAAGTTATTAGATTTTGGG+CGG + chr3_1:91164032-91164051 None:intergenic 25.0%
!! TTAACCTTTGGGAATTTAAA+TGG - chr3_1:91164048-91164067 Msa0387260:intron 25.0%
! ATTATTGGTCAATTTCATGT+TGG - chr3_1:91164161-91164180 Msa0387260:intron 25.0%
! AAAATATCATGTGAAACTTG+AGG - chr3_1:91164509-91164528 Msa0387260:intron 25.0%
! AAATATCATGTGAAACTTGA+GGG - chr3_1:91164510-91164529 Msa0387260:intron 25.0%
!! ATGTAAAGAATATGATGATG+TGG + chr3_1:91164737-91164756 None:intergenic 25.0%
!!! TTTATGGTTTAATTTTCTCC+AGG - chr3_1:91164825-91164844 Msa0387260:intron 25.0%
!!! TTATGGTTTAATTTTCTCCA+GGG - chr3_1:91164826-91164845 Msa0387260:intron 25.0%
! GAATCATGTGTATTATAACA+GGG + chr3_1:91165200-91165219 None:intergenic 25.0%
! AGAATCATGTGTATTATAAC+AGG + chr3_1:91165201-91165220 None:intergenic 25.0%
! TTATATTTGCCAATGATACT+GGG - chr3_1:91165279-91165298 Msa0387260:intron 25.0%
! AAAATCAAAACAGGTAATAC+TGG + chr3_1:91165463-91165482 None:intergenic 25.0%
! ACTAAAAAGTTAATCAGACA+AGG - chr3_1:91165531-91165550 Msa0387260:intron 25.0%
! CATATAGTAGAACACATAAA+TGG + chr3_1:91165673-91165692 None:intergenic 25.0%
! TTATGTGTTCTACTATATGT+CGG - chr3_1:91165674-91165693 Msa0387260:intron 25.0%
! ATAAACATGCAGAAATAGAT+TGG - chr3_1:91165747-91165766 Msa0387260:intron 25.0%
!!! TGCCTTTTGGTTATATTATA+TGG - chr3_1:91165807-91165826 Msa0387260:intron 25.0%
! AGCCATATAATATAACCAAA+AGG + chr3_1:91165812-91165831 None:intergenic 25.0%
! AAACAAATCAAAAGGAACAA+GGG + chr3_1:91166070-91166089 None:intergenic 25.0%
! AAAACAAATCAAAAGGAACA+AGG + chr3_1:91166071-91166090 None:intergenic 25.0%
! CCATTAGAAAACAAATCAAA+AGG + chr3_1:91166078-91166097 None:intergenic 25.0%
!!! CCTTTTGATTTGTTTTCTAA+TGG - chr3_1:91166075-91166094 Msa0387260:intron 25.0%
!!! ATAGTTTGTTGTTGAAATTG+GGG + chr3_1:91166141-91166160 None:intergenic 25.0%
!!! GATAGTTTGTTGTTGAAATT+GGG + chr3_1:91166142-91166161 None:intergenic 25.0%
!!! TGATAGTTTGTTGTTGAAAT+TGG + chr3_1:91166143-91166162 None:intergenic 25.0%
! GAATAGAACATAATTGTGAA+AGG + chr3_1:91166363-91166382 None:intergenic 25.0%
! ATGTATGGTAACCAATTTAT+GGG - chr3_1:91166905-91166924 Msa0387260:intron 25.0%
!!! TCACTTTTGAAAAGTCAATA+AGG + chr3_1:91167114-91167133 None:intergenic 25.0%
AATTCCGTTGAGGTAAATTT+GGG + chr3_1:91159760-91159779 None:intergenic 30.0%
GCAGAGATAAAAAAACGTAA+CGG + chr3_1:91159849-91159868 None:intergenic 30.0%
CATCCATACAAGAAAATCAA+AGG + chr3_1:91160175-91160194 None:intergenic 30.0%
ATGACAGTTAAGTTATTGAC+TGG - chr3_1:91160199-91160218 Msa0387260:CDS 30.0%
ACTCTTCTGTATATACAGTT+TGG - chr3_1:91160918-91160937 Msa0387260:CDS 30.0%
!! AATTAGCAAGAGTGTTTAAG+TGG - chr3_1:91160971-91160990 Msa0387260:CDS 30.0%
! CATTGTGGTTATGATTTTTC+AGG - chr3_1:91161043-91161062 Msa0387260:CDS 30.0%
CAAGCAAAGCATATTGTTAA+AGG - chr3_1:91161066-91161085 Msa0387260:CDS 30.0%
GATTGAACAATGTTAAGATC+TGG + chr3_1:91161182-91161201 None:intergenic 30.0%
TGCTTATTTCAGAAAGTAAC+AGG + chr3_1:91161268-91161287 None:intergenic 30.0%
TTTGTGATTGACATTCTGTT+AGG - chr3_1:91161358-91161377 Msa0387260:intron 30.0%
AGATGAATACAATCTCACTA+AGG + chr3_1:91161405-91161424 None:intergenic 30.0%
ATCTTGTATTCTTTGTGGAT+GGG - chr3_1:91161421-91161440 Msa0387260:intron 30.0%
! CATCATTTCTTTTGAATCAC+CGG - chr3_1:91161451-91161470 Msa0387260:intron 30.0%
!! TTTTGTTATATTCTAGCTGC+TGG - chr3_1:91161527-91161546 Msa0387260:intron 30.0%
GAGACAATCATAAAGAATTG+CGG - chr3_1:91161549-91161568 Msa0387260:intron 30.0%
AGACAATCATAAAGAATTGC+GGG - chr3_1:91161550-91161569 Msa0387260:intron 30.0%
GGTGAAAATAGTAAAGAAGA+AGG - chr3_1:91161620-91161639 Msa0387260:intron 30.0%
! ATATTTTGCATGATGAAAGC+AGG + chr3_1:91161690-91161709 None:intergenic 30.0%
! GTACGATTTTATCCCAAATT+TGG + chr3_1:91162231-91162250 None:intergenic 30.0%
!!! AAACACGTCTTATTTTAGGA+TGG - chr3_1:91162331-91162350 Msa0387260:CDS 30.0%
!!! CTTATTTTAGGATGGATTGA+AGG - chr3_1:91162339-91162358 Msa0387260:CDS 30.0%
TTGTTTCCCTCTCTTAAATT+AGG + chr3_1:91162946-91162965 None:intergenic 30.0%
TATTACAGTTGAGATGCATT+TGG - chr3_1:91163124-91163143 Msa0387260:intron 30.0%
! TGCTTGCTTATATAGGTTTT+GGG - chr3_1:91163184-91163203 Msa0387260:intron 30.0%
!!! ATATAGGTTTTGGGAATGAA+TGG - chr3_1:91163193-91163212 Msa0387260:intron 30.0%
!!! TGGATTTTTTTGTTAGCATG+CGG - chr3_1:91163285-91163304 Msa0387260:intron 30.0%
!! CAGAATCACGTATATTTTGA+GGG + chr3_1:91163387-91163406 None:intergenic 30.0%
! TCAGAATCACGTATATTTTG+AGG + chr3_1:91163388-91163407 None:intergenic 30.0%
ATATACGTGATTCTGATTCT+CGG - chr3_1:91163392-91163411 Msa0387260:intron 30.0%
TCTCCGTGTTATCATATAAA+AGG - chr3_1:91163471-91163490 Msa0387260:intron 30.0%
GAAATATGAAGATAGCTTGA+GGG + chr3_1:91163533-91163552 None:intergenic 30.0%
AAGATATGAAGATAGCTTGA+GGG + chr3_1:91163567-91163586 None:intergenic 30.0%
AAAGATATGAAGATAGCTTG+AGG + chr3_1:91163568-91163587 None:intergenic 30.0%
GAAACAGAACATGTCTTAAA+AGG + chr3_1:91163689-91163708 None:intergenic 30.0%
TTGATCTATGTAAGATAGCT+TGG - chr3_1:91163851-91163870 Msa0387260:intron 30.0%
GCTTAAGAAATGCTTGTATA+TGG - chr3_1:91163931-91163950 Msa0387260:intron 30.0%
! TTCAAAAAATGATTTAGGGC+GGG + chr3_1:91164001-91164020 None:intergenic 30.0%
GTTCAAAAAATGATTTAGGG+CGG + chr3_1:91164002-91164021 None:intergenic 30.0%
! TAAGTTATTAGATTTTGGGC+GGG + chr3_1:91164031-91164050 None:intergenic 30.0%
CAATCCATTTAAATTCCCAA+AGG + chr3_1:91164055-91164074 None:intergenic 30.0%
TGACATTATGAACTACGATA+AGG - chr3_1:91164073-91164092 Msa0387260:intron 30.0%
!! TTTTGAGAAAAGTGTGTTGT+TGG - chr3_1:91164246-91164265 Msa0387260:intron 30.0%
!! AAACTTGAGGGTTTTATCAA+TGG - chr3_1:91164522-91164541 Msa0387260:intron 30.0%
!! AACTTGAGGGTTTTATCAAT+GGG - chr3_1:91164523-91164542 Msa0387260:intron 30.0%
TGACCATTACTTCTATGTTT+AGG - chr3_1:91164597-91164616 Msa0387260:intron 30.0%
GACCATTACTTCTATGTTTA+GGG - chr3_1:91164598-91164617 Msa0387260:intron 30.0%
ACCATTACTTCTATGTTTAG+GGG - chr3_1:91164599-91164618 Msa0387260:intron 30.0%
CTTACGAAGTTGAATTAACA+AGG + chr3_1:91164690-91164709 None:intergenic 30.0%
CTTGTTAATTCAACTTCGTA+AGG - chr3_1:91164688-91164707 Msa0387260:intron 30.0%
GTTATATTTGCCAATGATAC+TGG - chr3_1:91165278-91165297 Msa0387260:intron 30.0%
ATAAAGTTTCCCAGTATCAT+TGG + chr3_1:91165291-91165310 None:intergenic 30.0%
! TTCATTCTTCTTATTTGACC+TGG - chr3_1:91165622-91165641 Msa0387260:intron 30.0%
! TCATTCTTCTTATTTGACCT+GGG - chr3_1:91165623-91165642 Msa0387260:intron 30.0%
CAACAAACTATCATATCTCA+AGG - chr3_1:91166150-91166169 Msa0387260:intron 30.0%
TCACTATATACTCAAAACAC+AGG - chr3_1:91166228-91166247 Msa0387260:intron 30.0%
TTGAGGAGATGTCATTATTT+AGG - chr3_1:91166493-91166512 Msa0387260:intron 30.0%
ATTTCTGCTCTCATTTATGT+TGG - chr3_1:91166516-91166535 Msa0387260:intron 30.0%
! GGTTATTGATTGAAGAGAAA+TGG + chr3_1:91166763-91166782 None:intergenic 30.0%
TTTCTCTTCAATCAATAACC+AGG - chr3_1:91166763-91166782 Msa0387260:intron 30.0%
GATGTATGGTAACCAATTTA+TGG - chr3_1:91166904-91166923 Msa0387260:intron 30.0%
AAATAACTTATCCTCTGGTT+TGG + chr3_1:91167086-91167105 None:intergenic 30.0%
AAACCAGAGGATAAGTTATT+TGG - chr3_1:91167085-91167104 Msa0387260:five_prime_UTR 30.0%
AACCAGAGGATAAGTTATTT+GGG - chr3_1:91167086-91167105 Msa0387260:five_prime_UTR 30.0%
AAATGGCAAACAAGTGAAAA+AGG + chr3_1:91167197-91167216 None:intergenic 30.0%
! AACACGTGGAGTGTTATTAT+TGG - chr3_1:91159703-91159722 Msa0387260:three_prime_UTR 35.0%
! TTGAGGTAAATTTGGGACAA+GGG + chr3_1:91159753-91159772 None:intergenic 35.0%
TTGTCCCAAATTTACCTCAA+CGG - chr3_1:91159753-91159772 Msa0387260:three_prime_UTR 35.0%
GAATTCCGTTGAGGTAAATT+TGG + chr3_1:91159761-91159780 None:intergenic 35.0%
TGAGAGATAGATAGAAAGAG+AGG - chr3_1:91159821-91159840 Msa0387260:three_prime_UTR 35.0%
! AAGTGTTTGATCGATTCTCT+TGG - chr3_1:91159904-91159923 Msa0387260:CDS 35.0%
TGTTTGATCAATCAGGGAAT+AGG - chr3_1:91160325-91160344 Msa0387260:CDS 35.0%
GTTTGATCAATCAGGGAATA+GGG - chr3_1:91160326-91160345 Msa0387260:CDS 35.0%
!!! GACACCATGTCTTTTGTTTT+TGG - chr3_1:91160475-91160494 Msa0387260:intron 35.0%
CGTTAAACATTCATAACTGC+TGG - chr3_1:91160556-91160575 Msa0387260:intron 35.0%
CCTCAAAGCAACTCTAATAA+TGG + chr3_1:91160693-91160712 None:intergenic 35.0%
! CCATTATTAGAGTTGCTTTG+AGG - chr3_1:91160690-91160709 Msa0387260:intron 35.0%
ATACACAAACCCGAAACTAT+TGG + chr3_1:91160775-91160794 None:intergenic 35.0%
TCTTCTACTATTGGGAGAAA+CGG - chr3_1:91160858-91160877 Msa0387260:CDS 35.0%
CATAGTTTGAGAACTCATTG+TGG - chr3_1:91161028-91161047 Msa0387260:CDS 35.0%
AAAGGTTTAAAGAAGCGGAT+TGG - chr3_1:91161084-91161103 Msa0387260:CDS 35.0%
ACATTCTGTTAGGAGAGAAA+AGG - chr3_1:91161368-91161387 Msa0387260:intron 35.0%
CATCTTGTATTCTTTGTGGA+TGG - chr3_1:91161420-91161439 Msa0387260:intron 35.0%
GACAATCATAAAGAATTGCG+GGG - chr3_1:91161551-91161570 Msa0387260:intron 35.0%
ATGAAAGCAGGTAACGAAAT+AGG + chr3_1:91161678-91161697 None:intergenic 35.0%
!! TACTGGCTCTTATTGATACT+TGG - chr3_1:91161764-91161783 Msa0387260:intron 35.0%
GATAAAATCGTACCAAAGTG+CGG - chr3_1:91162238-91162257 Msa0387260:intron 35.0%
! TTTTGTCTTTAACCGCACTT+TGG + chr3_1:91162253-91162272 None:intergenic 35.0%
! CGTGTTTCTTTAAAGACACT+CGG + chr3_1:91162318-91162337 None:intergenic 35.0%
!! TTAGGATGGATTGAAGGAAT+AGG - chr3_1:91162345-91162364 Msa0387260:CDS 35.0%
! GAAGGAATAGGAGTATATCT+TGG - chr3_1:91162357-91162376 Msa0387260:CDS 35.0%
TATCTTGGAAGATCATGTTG+AGG - chr3_1:91162372-91162391 Msa0387260:CDS 35.0%
ATCTTGGAAGATCATGTTGA+GGG - chr3_1:91162373-91162392 Msa0387260:intron 35.0%
!!! TAAGACCACTTTTAGCTTGT+GGG + chr3_1:91162448-91162467 None:intergenic 35.0%
ACAATGAGTAGACCACATAA+AGG - chr3_1:91162515-91162534 Msa0387260:intron 35.0%
ATATGTCCAAGGAAATGACA+TGG + chr3_1:91162667-91162686 None:intergenic 35.0%
ATTTGGTTGTCATATGTCCA+AGG + chr3_1:91162678-91162697 None:intergenic 35.0%
GATACTTCAAGACAATACCA+AGG - chr3_1:91163078-91163097 Msa0387260:intron 35.0%
!!! TGCATTTGGCACTTTTTTTG+AGG - chr3_1:91163138-91163157 Msa0387260:intron 35.0%
TCTCATCTGCTTGCTTATAT+AGG - chr3_1:91163177-91163196 Msa0387260:intron 35.0%
! CTGCTTGCTTATATAGGTTT+TGG - chr3_1:91163183-91163202 Msa0387260:intron 35.0%
!!! GGATTTTTTTGTTAGCATGC+GGG - chr3_1:91163286-91163305 Msa0387260:intron 35.0%
!!! GATTTTTTTGTTAGCATGCG+GGG - chr3_1:91163287-91163306 Msa0387260:intron 35.0%
!!! ATTTTTTTGTTAGCATGCGG+GGG - chr3_1:91163288-91163307 Msa0387260:intron 35.0%
TAGCTTGAGGGTTAGAAAAT+AGG + chr3_1:91163521-91163540 None:intergenic 35.0%
GGAAATATGAAGATAGCTTG+AGG + chr3_1:91163534-91163553 None:intergenic 35.0%
TAGCTTGAGGGTTAGAAAAT+AGG + chr3_1:91163521-91163540 None:intergenic 35.0%
ACAGAACATGTCTTAAAAGG+TGG + chr3_1:91163686-91163705 None:intergenic 35.0%
GAGTGACAAAGTGATTTAAG+GGG + chr3_1:91163802-91163821 None:intergenic 35.0%
GGAGTGACAAAGTGATTTAA+GGG + chr3_1:91163803-91163822 None:intergenic 35.0%
TGGAGTGACAAAGTGATTTA+AGG + chr3_1:91163804-91163823 None:intergenic 35.0%
! TCAAAAAATGATTTAGGGCG+GGG + chr3_1:91164000-91164019 None:intergenic 35.0%
! AAGTTATTAGATTTTGGGCG+GGG + chr3_1:91164030-91164049 None:intergenic 35.0%
! GTTTTCCCTCTTAAAAACCT+AGG + chr3_1:91164206-91164225 None:intergenic 35.0%
AATCAATGCACAGTCAGATA+TGG + chr3_1:91164326-91164345 None:intergenic 35.0%
CATCTTACTTCTTTGTTACC+AGG + chr3_1:91164443-91164462 None:intergenic 35.0%
!! ACTTGAGGGTTTTATCAATG+GGG - chr3_1:91164524-91164543 Msa0387260:intron 35.0%
TCATCATGAAAAAGAACAGC+AGG + chr3_1:91164714-91164733 None:intergenic 35.0%
CAAGCATGAATCCATTTCAT+CGG - chr3_1:91164907-91164926 Msa0387260:intron 35.0%
AAGCATGAATCCATTTCATC+GGG - chr3_1:91164908-91164927 Msa0387260:intron 35.0%
CAAGCATGAATCCATTTCTT+CGG - chr3_1:91164949-91164968 Msa0387260:intron 35.0%
AAGCATGAATCCATTTCTTC+GGG - chr3_1:91164950-91164969 Msa0387260:intron 35.0%
GTATCTCCAGTATCAATCAA+AGG + chr3_1:91165046-91165065 None:intergenic 35.0%
ATGAATGCAGAGAGTAGAAA+TGG + chr3_1:91165115-91165134 None:intergenic 35.0%
CTCTCTGCATTCATTAACAT+AGG - chr3_1:91165121-91165140 Msa0387260:intron 35.0%
TGTCTGATCTCTTTGCTTTA+TGG - chr3_1:91165325-91165344 Msa0387260:intron 35.0%
GTCTGATCTCTTTGCTTTAT+GGG - chr3_1:91165326-91165345 Msa0387260:intron 35.0%
TCTGATCTCTTTGCTTTATG+GGG - chr3_1:91165327-91165346 Msa0387260:intron 35.0%
!!! TGAGTTTTGGCTTTAAAGCT+AGG - chr3_1:91165359-91165378 Msa0387260:intron 35.0%
!!! GAGTTTTGGCTTTAAAGCTA+GGG - chr3_1:91165360-91165379 Msa0387260:intron 35.0%
!! GGGCTTGTTTGATTGTATTT+TGG - chr3_1:91165421-91165440 Msa0387260:CDS 35.0%
! ATGGATCATAGGCTTAGTTT+TGG - chr3_1:91165701-91165720 Msa0387260:intron 35.0%
! GCAAGTGAATTATCTGCTTT+TGG + chr3_1:91165997-91166016 None:intergenic 35.0%
ACATTAGGCATACTTCCATT+CGG + chr3_1:91166186-91166205 None:intergenic 35.0%
! AATGGAAGTATGCCTAATGT+GGG - chr3_1:91166186-91166205 Msa0387260:intron 35.0%
!! TCTGATCTCTGCTTTTAAGT+TGG - chr3_1:91166404-91166423 Msa0387260:intron 35.0%
! CAGTAACCTGTTGAATTTTG+AGG - chr3_1:91166476-91166495 Msa0387260:intron 35.0%
ACATCTCCTCAAAATTCAAC+AGG + chr3_1:91166485-91166504 None:intergenic 35.0%
CAGGTTCAAAGTAACCAATT+GGG - chr3_1:91166782-91166801 Msa0387260:intron 35.0%
ATACATCTGTTGAGGATACA+TGG + chr3_1:91166891-91166910 None:intergenic 35.0%
ATGTATCCTCAACAGATGTA+TGG - chr3_1:91166890-91166909 Msa0387260:intron 35.0%
GGTAACCAATTTATGGGATA+TGG - chr3_1:91166911-91166930 Msa0387260:intron 35.0%
CATAGCCATATCCCATAAAT+TGG + chr3_1:91166919-91166938 None:intergenic 35.0%
CAATTTATGGGATATGGCTA+TGG - chr3_1:91166917-91166936 Msa0387260:intron 35.0%
! ATTTGCTGCTCGATATATTG+AGG + chr3_1:91166974-91166993 None:intergenic 35.0%
TATATCGAGCAGCAAATGTA+TGG - chr3_1:91166977-91166996 Msa0387260:CDS 35.0%
ACCAGAGGATAAGTTATTTG+GGG - chr3_1:91167087-91167106 Msa0387260:five_prime_UTR 35.0%
GGCAGAGAAACAAAACAATA+TGG + chr3_1:91167295-91167314 None:intergenic 35.0%
TTATAGCCTAAATCTATCGC+CGG + chr3_1:91167320-91167339 None:intergenic 35.0%
! GTTGAGGTAAATTTGGGACA+AGG + chr3_1:91159754-91159773 None:intergenic 40.0%
AACTCAACTGAATTCCGTTG+AGG + chr3_1:91159770-91159789 None:intergenic 40.0%
TTTCTTTGATCGTTGCAACG+TGG - chr3_1:91159879-91159898 Msa0387260:CDS 40.0%
TACGAAACTACCAATTGCGT+TGG - chr3_1:91160039-91160058 Msa0387260:CDS 40.0%
AATGGAAATGCCAACGCAAT+TGG + chr3_1:91160052-91160071 None:intergenic 40.0%
CGCTGTGATAAACATTGCAA+TGG - chr3_1:91160235-91160254 Msa0387260:CDS 40.0%
! GGGATAGTACATGGCTATTT+TGG - chr3_1:91160346-91160365 Msa0387260:CDS 40.0%
GCGACCAAAAACAAAAGACA+TGG + chr3_1:91160482-91160501 None:intergenic 40.0%
!!! GTTTTTGGTCGCTGTATGAT+AGG - chr3_1:91160490-91160509 Msa0387260:intron 40.0%
!! CTCTAATGGTCCTTTTGGAA+CGG + chr3_1:91160738-91160757 None:intergenic 40.0%
! GAATGCTCTAATGGTCCTTT+TGG + chr3_1:91160743-91160762 None:intergenic 40.0%
TACCTGAACGAATGCTCTAA+TGG + chr3_1:91160752-91160771 None:intergenic 40.0%
CGTTCAGGTACCAATAGTTT+CGG - chr3_1:91160762-91160781 Msa0387260:CDS 40.0%
GTTCAGGTACCAATAGTTTC+GGG - chr3_1:91160763-91160782 Msa0387260:CDS 40.0%
CTTCTACTATTGGGAGAAAC+GGG - chr3_1:91160859-91160878 Msa0387260:CDS 40.0%
! TTGACCTTCTTTTCACACTG+CGG - chr3_1:91161224-91161243 Msa0387260:intron 40.0%
ATGCTTGGGGTTGTTTAAAG+TGG + chr3_1:91161293-91161312 None:intergenic 40.0%
! ATCTCACTAAGGCATTTGAG+AGG + chr3_1:91161394-91161413 None:intergenic 40.0%
AAGCAGGTAACGAAATAGGA+AGG + chr3_1:91161674-91161693 None:intergenic 40.0%
CATGATAATCGGGCTACAAT+TGG + chr3_1:91161732-91161751 None:intergenic 40.0%
TTCTCTCGGACATGATAATC+GGG + chr3_1:91161742-91161761 None:intergenic 40.0%
CTTCTCTCGGACATGATAAT+CGG + chr3_1:91161743-91161762 None:intergenic 40.0%
TAAGAGCCAGTATCTTCTCT+CGG + chr3_1:91161756-91161775 None:intergenic 40.0%
! GATACTTGGCAAGAAGCTTT+TGG - chr3_1:91161778-91161797 Msa0387260:intron 40.0%
! ACTGTGGATATTTTGCCCTT+GGG + chr3_1:91161807-91161826 None:intergenic 40.0%
! TACTGTGGATATTTTGCCCT+TGG + chr3_1:91161808-91161827 None:intergenic 40.0%
CCATTATGAGTAGGTAGGAA+GGG - chr3_1:91161878-91161897 Msa0387260:intron 40.0%
!!! CTGCAGGGTTTTAGATAAAG+AGG - chr3_1:91161922-91161941 Msa0387260:intron 40.0%
TGATGTGATACAAAAAGGCG+TGG - chr3_1:91161998-91162017 Msa0387260:CDS 40.0%
AACCAACACCAAATTGTGAC+TGG - chr3_1:91162272-91162291 Msa0387260:intron 40.0%
ACCAACACCAAATTGTGACT+GGG - chr3_1:91162273-91162292 Msa0387260:intron 40.0%
ATCTTGTCCCAGTCACAATT+TGG + chr3_1:91162283-91162302 None:intergenic 40.0%
! CTTTAAAGACACTCGGTCTT+TGG + chr3_1:91162311-91162330 None:intergenic 40.0%
TCTTGGAAGATCATGTTGAG+GGG - chr3_1:91162374-91162393 Msa0387260:intron 40.0%
!!! GTAAGACCACTTTTAGCTTG+TGG + chr3_1:91162449-91162468 None:intergenic 40.0%
GTCTTACTCTCAACATAACC+AGG - chr3_1:91162462-91162481 Msa0387260:intron 40.0%
!! AACATAACCAGGAAGCACTT+TGG - chr3_1:91162473-91162492 Msa0387260:intron 40.0%
! ATTGTATCGCTGGTTACCTT+TGG + chr3_1:91162500-91162519 None:intergenic 40.0%
!! TAGACCACATAAAGGTACTC+TGG - chr3_1:91162523-91162542 Msa0387260:intron 40.0%
! GACTCCAAAGCTTTTCTTGT+CGG + chr3_1:91162559-91162578 None:intergenic 40.0%
! ACCAAACCATGTCATTTCCT+TGG - chr3_1:91162658-91162677 Msa0387260:intron 40.0%
TCCAAGGAAATGACATGGTT+TGG + chr3_1:91162662-91162681 None:intergenic 40.0%
GGAGGCTGATCTTTCTAATT+TGG + chr3_1:91162695-91162714 None:intergenic 40.0%
CAGATTGCTCAGATCTTGAA+GGG + chr3_1:91163321-91163340 None:intergenic 40.0%
! GTTTGTACTGGTGTGAATAC+AGG + chr3_1:91163346-91163365 None:intergenic 40.0%
ACCAGTACAAACACAACCAT+TGG - chr3_1:91163354-91163373 Msa0387260:intron 40.0%
CCAGTACAAACACAACCATT+GGG - chr3_1:91163355-91163374 Msa0387260:intron 40.0%
!! TTTTGAGGGTATGATCCCAA+TGG + chr3_1:91163373-91163392 None:intergenic 40.0%
TGACAAAGTGATTTAAGGGG+AGG + chr3_1:91163799-91163818 None:intergenic 40.0%
! CAAAAAATGATTTAGGGCGG+GGG + chr3_1:91163999-91164018 None:intergenic 40.0%
! AGTTATTAGATTTTGGGCGG+GGG + chr3_1:91164029-91164048 None:intergenic 40.0%
!! AGAGGACCTAGGTTTTTAAG+AGG - chr3_1:91164197-91164216 Msa0387260:intron 40.0%
!! GAGGACCTAGGTTTTTAAGA+GGG - chr3_1:91164198-91164217 Msa0387260:intron 40.0%
ACCACGTGCATTCTGAATTT+CGG + chr3_1:91164381-91164400 None:intergenic 40.0%
TCAGAATGCACGTGGTATTA+TGG - chr3_1:91164385-91164404 Msa0387260:intron 40.0%
!! CTTGAGGGTTTTATCAATGG+GGG - chr3_1:91164525-91164544 Msa0387260:intron 40.0%
GCCCCTAAACATAGAAGTAA+TGG + chr3_1:91164603-91164622 None:intergenic 40.0%
! CGATGAAATGGATTCATGCT+TGG + chr3_1:91164909-91164928 None:intergenic 40.0%
AAACCAAATCCTGAACCTAG+TGG - chr3_1:91164998-91165017 Msa0387260:intron 40.0%
ACATCTATAAGTGCTCCACT+AGG + chr3_1:91165016-91165035 None:intergenic 40.0%
! GGAGCACTTATAGATGTTGA+TGG - chr3_1:91165019-91165038 Msa0387260:intron 40.0%
GATGGTCCTTTGATTGATAC+TGG - chr3_1:91165037-91165056 Msa0387260:intron 40.0%
CTAGTAAACAAACTGATGCG+AGG - chr3_1:91165065-91165084 Msa0387260:intron 40.0%
! GGGGAATTGAAGATGAGTTT+TGG - chr3_1:91165346-91165365 Msa0387260:intron 40.0%
TCTACTATATGTCGGAGCAA+TGG - chr3_1:91165682-91165701 Msa0387260:intron 40.0%
!! TCAAGTTGACTAAACCTGTC+TGG - chr3_1:91165784-91165803 Msa0387260:intron 40.0%
GCTGAACCATTTGATGTAGA+GGG + chr3_1:91165916-91165935 None:intergenic 40.0%
AGCTGAACCATTTGATGTAG+AGG + chr3_1:91165917-91165936 None:intergenic 40.0%
! AGTGAAGGTTGATCCCAAAT+GGG - chr3_1:91165942-91165961 Msa0387260:intron 40.0%
CTGTTGTTCTACAGGAACAA+GGG + chr3_1:91166019-91166038 None:intergenic 40.0%
TGTTGAAATTGGGGAGCTAT+TGG + chr3_1:91166132-91166151 None:intergenic 40.0%
! CAAGGTGTATTTTACCCGAA+TGG - chr3_1:91166168-91166187 Msa0387260:intron 40.0%
CATTAGGCATACTTCCATTC+GGG + chr3_1:91166185-91166204 None:intergenic 40.0%
! GAATGGAAGTATGCCTAATG+TGG - chr3_1:91166185-91166204 Msa0387260:intron 40.0%
! ATGGAAGTATGCCTAATGTG+GGG - chr3_1:91166187-91166206 Msa0387260:intron 40.0%
ACACCATAAACAGGTGAAAG+TGG + chr3_1:91166297-91166316 None:intergenic 40.0%
GCATTAAGCACACCATAAAC+AGG + chr3_1:91166306-91166325 None:intergenic 40.0%
TTGCATACAGGTACACAAAG+TGG - chr3_1:91166554-91166573 Msa0387260:intron 40.0%
GAAATTCAACCTGCAGACAA+TGG - chr3_1:91166602-91166621 Msa0387260:intron 40.0%
GAAGAGAAATGGCTAGCATT+TGG + chr3_1:91166752-91166771 None:intergenic 40.0%
! CCAATTGGTTACTTTGAACC+TGG + chr3_1:91166784-91166803 None:intergenic 40.0%
CCAGGTTCAAAGTAACCAAT+TGG - chr3_1:91166781-91166800 Msa0387260:intron 40.0%
GTTCCGCATCAAATGCAAAA+TGG - chr3_1:91166854-91166873 Msa0387260:intron 40.0%
! GGACCATTTTGCATTTGATG+CGG + chr3_1:91166860-91166879 None:intergenic 40.0%
TCAAATGCAAAATGGTCCTG+TGG - chr3_1:91166862-91166881 Msa0387260:intron 40.0%
TGGTTACCATACATCTGTTG+AGG + chr3_1:91166899-91166918 None:intergenic 40.0%
TGCTTCAAGAAATCCTTACC+AGG - chr3_1:91167021-91167040 Msa0387260:CDS 40.0%
!! AACTTATCCTCTGGTTTGGA+AGG + chr3_1:91167082-91167101 None:intergenic 40.0%
TCCCCAAATAACTTATCCTC+TGG + chr3_1:91167091-91167110 None:intergenic 40.0%
! TTTTGTAAGGGCTATCAGCT+CGG + chr3_1:91167157-91167176 None:intergenic 40.0%
!!! TGTTTTGTTTCTCTGCCAAC+CGG - chr3_1:91167298-91167317 Msa0387260:five_prime_UTR 40.0%
ATAAACTTGGTCGGCATAGC+TGG - chr3_1:91159677-91159696 Msa0387260:three_prime_UTR 45.0%
! AGGTAAATTTGGGACAAGGG+TGG + chr3_1:91159750-91159769 None:intergenic 45.0%
ACGCACACACACAAAGAAGA+TGG + chr3_1:91159795-91159814 None:intergenic 45.0%
TTCTCTTGGTGAAACTGCGA+TGG - chr3_1:91159918-91159937 Msa0387260:CDS 45.0%
AACTGCGATGGTGAATCCTT+TGG - chr3_1:91159930-91159949 Msa0387260:CDS 45.0%
ACTTCCTCATTGGTCCTGAT+TGG - chr3_1:91159971-91159990 Msa0387260:CDS 45.0%
CTTCCTCATTGGTCCTGATT+GGG - chr3_1:91159972-91159991 Msa0387260:CDS 45.0%
TCGAGATTCAAAGCCCAATC+AGG + chr3_1:91159988-91160007 None:intergenic 45.0%
GATGTACTCAATCGTGATCC+CGG - chr3_1:91160015-91160034 Msa0387260:CDS 45.0%
ATGTACTCAATCGTGATCCC+GGG - chr3_1:91160016-91160035 Msa0387260:CDS 45.0%
! CAATTGGTAGTTTCGTACCC+GGG + chr3_1:91160036-91160055 None:intergenic 45.0%
! GCAATTGGTAGTTTCGTACC+CGG + chr3_1:91160037-91160056 None:intergenic 45.0%
CAGGGAATAGGGATAGTACA+TGG - chr3_1:91160337-91160356 Msa0387260:CDS 45.0%
TGTGATCCACTTGTGTAGTG+AGG - chr3_1:91160385-91160404 Msa0387260:CDS 45.0%
GCAATTCCTCACTACACAAG+TGG + chr3_1:91160394-91160413 None:intergenic 45.0%
CTTGTGTAGTGAGGAATTGC+AGG - chr3_1:91160394-91160413 Msa0387260:CDS 45.0%
! CTGCTGGCTATTTATCATCG+AGG - chr3_1:91160572-91160591 Msa0387260:intron 45.0%
GTTAATTGCACGTGCGTTCA+CGG - chr3_1:91160641-91160660 Msa0387260:intron 45.0%
! TTTGAGGCGCGATAAATGTG+AGG - chr3_1:91160706-91160725 Msa0387260:CDS 45.0%
! GACCATTAGAGCATTCGTTC+AGG - chr3_1:91160747-91160766 Msa0387260:CDS 45.0%
ACAACCGCAGTGTGAAAAGA+AGG + chr3_1:91161231-91161250 None:intergenic 45.0%
TCGGCTCTCTCTATATGCTT+GGG + chr3_1:91161307-91161326 None:intergenic 45.0%
GATGATAGAGGCTGTTAGAC+CGG + chr3_1:91161473-91161492 None:intergenic 45.0%
CTCATGAAGAACCTCTCTCT+CGG + chr3_1:91161598-91161617 None:intergenic 45.0%
GAGAGAGGTTCTTCATGAGA+TGG - chr3_1:91161599-91161618 Msa0387260:intron 45.0%
TCATGTCCGAGAGAAGATAC+TGG - chr3_1:91161747-91161766 Msa0387260:intron 45.0%
! ACTTGGCAAGAAGCTTTTGG+AGG - chr3_1:91161781-91161800 Msa0387260:intron 45.0%
TGGTAGGCAGCATAATACTG+TGG + chr3_1:91161823-91161842 None:intergenic 45.0%
ACAGTATTATGCTGCCTACC+AGG - chr3_1:91161822-91161841 Msa0387260:intron 45.0%
ATAATGGCAGGTAGAGAGCA+AGG + chr3_1:91161865-91161884 None:intergenic 45.0%
CTCTACCTGCCATTATGAGT+AGG - chr3_1:91161869-91161888 Msa0387260:intron 45.0%
ACCTGCCATTATGAGTAGGT+AGG - chr3_1:91161873-91161892 Msa0387260:intron 45.0%
TCCTACCTACTCATAATGGC+AGG + chr3_1:91161877-91161896 None:intergenic 45.0%
GCCATTATGAGTAGGTAGGA+AGG - chr3_1:91161877-91161896 Msa0387260:intron 45.0%
CCCTTCCTACCTACTCATAA+TGG + chr3_1:91161881-91161900 None:intergenic 45.0%
TTAGCTGATGTTGAAGCTGC+AGG - chr3_1:91161906-91161925 Msa0387260:intron 45.0%
TAGCTGATGTTGAAGCTGCA+GGG - chr3_1:91161907-91161926 Msa0387260:intron 45.0%
ATGGCCAAATATAGCTGTCG+AGG - chr3_1:91162202-91162221 Msa0387260:intron 45.0%
GTCTCCTCGACAGCTATATT+TGG + chr3_1:91162209-91162228 None:intergenic 45.0%
CTGTCGAGGAGACCAAATTT+GGG - chr3_1:91162216-91162235 Msa0387260:intron 45.0%
!! TCCCAGTCACAATTTGGTGT+TGG + chr3_1:91162277-91162296 None:intergenic 45.0%
CCATTTGCATTGAGCTGTTG+TGG + chr3_1:91162400-91162419 None:intergenic 45.0%
CCACAACAGCTCAATGCAAA+TGG - chr3_1:91162397-91162416 Msa0387260:intron 45.0%
CAACAGCTCAATGCAAATGG+TGG - chr3_1:91162400-91162419 Msa0387260:intron 45.0%
TGAGACCCACAAGCTAAAAG+TGG - chr3_1:91162440-91162459 Msa0387260:intron 45.0%
TGGTCTACTCATTGTATCGC+TGG + chr3_1:91162510-91162529 None:intergenic 45.0%
! AGGTCCAGAGTACCTTTATG+TGG + chr3_1:91162530-91162549 None:intergenic 45.0%
CATGCCGACAAGAAAAGCTT+TGG - chr3_1:91162552-91162571 Msa0387260:intron 45.0%
ATTGGGTGTTCCCACAAACA+CGG + chr3_1:91162625-91162644 None:intergenic 45.0%
TGTTTGTGGGAACACCCAAT+TGG - chr3_1:91162625-91162644 Msa0387260:intron 45.0%
AGAAAGATCAGCCTCCTTGA+TGG - chr3_1:91162699-91162718 Msa0387260:intron 45.0%
ATCACTGTCTTCCATCAAGG+AGG + chr3_1:91162713-91162732 None:intergenic 45.0%
TCCTTGATGGAAGACAGTGA+TGG - chr3_1:91162712-91162731 Msa0387260:intron 45.0%
AAGACAGTGATGGCCAAGAA+AGG - chr3_1:91162722-91162741 Msa0387260:intron 45.0%
AGTAACCCTCCCTATTGCTA+GGG + chr3_1:91162781-91162800 None:intergenic 45.0%
TGCTCAGATCTTGAAGGGAA+CGG + chr3_1:91163316-91163335 None:intergenic 45.0%
GCAGATTGCTCAGATCTTGA+AGG + chr3_1:91163322-91163341 None:intergenic 45.0%
CCCAATGGTTGTGTTTGTAC+TGG + chr3_1:91163358-91163377 None:intergenic 45.0%
TGATTCTGATTCTCGGCAAC+CGG - chr3_1:91163399-91163418 Msa0387260:intron 45.0%
AGAGAGATGTACCTAAGGGT+TGG + chr3_1:91163454-91163473 None:intergenic 45.0%
ACGGAGAGAGATGTACCTAA+GGG + chr3_1:91163458-91163477 None:intergenic 45.0%
! GTTATTAGATTTTGGGCGGG+GGG + chr3_1:91164028-91164047 None:intergenic 45.0%
CGATAAGGCTGTTCAAGAGT+AGG - chr3_1:91164088-91164107 Msa0387260:intron 45.0%
CTAGGTCCTCTCTATGTAGT+GGG + chr3_1:91164188-91164207 None:intergenic 45.0%
ACCGAAATTCAGAATGCACG+TGG - chr3_1:91164377-91164396 Msa0387260:intron 45.0%
ACTTCTATGTTTAGGGGCTC+CGG - chr3_1:91164605-91164624 Msa0387260:intron 45.0%
TCGCACATACAAGCAAAGAG+TGG - chr3_1:91164660-91164679 Msa0387260:intron 45.0%
GATGAGTCACTTCTATGCCA+AGG - chr3_1:91164848-91164867 Msa0387260:intron 45.0%
CATCATTAAGCGCTAGTCCT+TGG + chr3_1:91164868-91164887 None:intergenic 45.0%
ATAAGTGCTCCACTAGGTTC+AGG + chr3_1:91165010-91165029 None:intergenic 45.0%
CAGAGAGTAGAAATGGAGAG+CGG + chr3_1:91165108-91165127 None:intergenic 45.0%
ATGTCGGAGCAATGGATCAT+AGG - chr3_1:91165690-91165709 Msa0387260:intron 45.0%
! TAAACCTGTCTGGTGCCTTT+TGG - chr3_1:91165794-91165813 Msa0387260:intron 45.0%
!! ATAACCAAAAGGCACCAGAC+AGG + chr3_1:91165801-91165820 None:intergenic 45.0%
! TCATCTTCTAGTGCTGAAGC+AGG - chr3_1:91165856-91165875 Msa0387260:intron 45.0%
! CATCTTCTAGTGCTGAAGCA+GGG - chr3_1:91165857-91165876 Msa0387260:intron 45.0%
! CATTTGGGATCAACCTTCAC+TGG + chr3_1:91165943-91165962 None:intergenic 45.0%
! CAGTGAAGGTTGATCCCAAA+TGG - chr3_1:91165941-91165960 Msa0387260:intron 45.0%
GCTGTTGTTCTACAGGAACA+AGG + chr3_1:91166020-91166039 None:intergenic 45.0%
ATTCTGTTGAGACACAGGAC+TGG + chr3_1:91166046-91166065 None:intergenic 45.0%
! GCTATTGGCTGGGTATTAAC+AGG + chr3_1:91166117-91166136 None:intergenic 45.0%
! AAATTGGGGAGCTATTGGCT+GGG + chr3_1:91166127-91166146 None:intergenic 45.0%
TATAGTGATTGCTCGTACCG+AGG + chr3_1:91166216-91166235 None:intergenic 45.0%
! CAGCCACTTTCACCTGTTTA+TGG - chr3_1:91166291-91166310 Msa0387260:CDS 45.0%
TGAAAGGGTTTGAGCTAGAC+AGG + chr3_1:91166347-91166366 None:intergenic 45.0%
ACAGGTTACTGCTACTGAGT+TGG + chr3_1:91166467-91166486 None:intergenic 45.0%
CATACAGGTACACAAAGTGG+CGG - chr3_1:91166557-91166576 Msa0387260:intron 45.0%
TTGAATTTCCCAAGGAGGAG+GGG + chr3_1:91166591-91166610 None:intergenic 45.0%
GTTGAATTTCCCAAGGAGGA+GGG + chr3_1:91166592-91166611 None:intergenic 45.0%
! TCTGCAGGTTGAATTTCCCA+AGG + chr3_1:91166599-91166618 None:intergenic 45.0%
! ACATGTACTGTGACTTGCAC+TGG + chr3_1:91166659-91166678 None:intergenic 45.0%
TTTGCAGCCTCCGTATATTC+AGG - chr3_1:91166805-91166824 Msa0387260:intron 45.0%
TTGCAGCCTCCGTATATTCA+GGG - chr3_1:91166806-91166825 Msa0387260:intron 45.0%
CCTGCAACACCCTGAATATA+CGG + chr3_1:91166818-91166837 None:intergenic 45.0%
! GGTGTTGCAGGTCCTTATAT+GGG - chr3_1:91166827-91166846 Msa0387260:intron 45.0%
AGCAACAGCAACAGCAACAA+GGG - chr3_1:91166948-91166967 Msa0387260:intron 45.0%
CATAAGATGCAGCAGAAACC+TGG + chr3_1:91167042-91167061 None:intergenic 45.0%
!! TTATCCTCTGGTTTGGAAGG+CGG + chr3_1:91167079-91167098 None:intergenic 45.0%
GTGAAACCAAAATCCACTCC+AGG - chr3_1:91167130-91167149 Msa0387260:five_prime_UTR 45.0%
TTTGTAAGGGCTATCAGCTC+GGG + chr3_1:91167156-91167175 None:intergenic 45.0%
!! TATATATATATATATATTGT+CGG + chr3_1:91161326-91161345 None:intergenic 5.0%
!! AATAATATACTAAATAAATA+TGG - chr3_1:91162971-91162990 Msa0387260:intron 5.0%
AAGCCCAATCAGGACCAATG+AGG + chr3_1:91159978-91159997 None:intergenic 50.0%
CTACTATTGGGAGAAACGGG+TGG - chr3_1:91160862-91160881 Msa0387260:CDS 50.0%
CGGCTCTCTCTATATGCTTG+GGG + chr3_1:91161306-91161325 None:intergenic 50.0%
! GTCGGCTCTCTCTATATGCT+TGG + chr3_1:91161308-91161327 None:intergenic 50.0%
!! AAGAAGCTTTTGGAGGCCCA+AGG - chr3_1:91161788-91161807 Msa0387260:intron 50.0%
!! AGAAGCTTTTGGAGGCCCAA+GGG - chr3_1:91161789-91161808 Msa0387260:intron 50.0%
GATAACGTACCAGCAGTTCC+TGG + chr3_1:91161843-91161862 None:intergenic 50.0%
GCTGTCGAGGAGACCAAATT+TGG - chr3_1:91162215-91162234 Msa0387260:intron 50.0%
! CTTTGGTCCAAAGTGCTTCC+TGG + chr3_1:91162483-91162502 None:intergenic 50.0%
!! CAGGAAGCACTTTGGACCAA+AGG - chr3_1:91162481-91162500 Msa0387260:intron 50.0%
! GCTTTTCTTGTCGGCATGTG+AGG + chr3_1:91162550-91162569 None:intergenic 50.0%
TGGTACAGAGCCTGCCAATT+GGG + chr3_1:91162642-91162661 None:intergenic 50.0%
TTGGTACAGAGCCTGCCAAT+TGG + chr3_1:91162643-91162662 None:intergenic 50.0%
GCCATCACTGTCTTCCATCA+AGG + chr3_1:91162716-91162735 None:intergenic 50.0%
AGTAGAGTCCCCCTAGCAAT+AGG - chr3_1:91162768-91162787 Msa0387260:intron 50.0%
GTAGAGTCCCCCTAGCAATA+GGG - chr3_1:91162769-91162788 Msa0387260:intron 50.0%
TAACCCTCCCTATTGCTAGG+GGG + chr3_1:91162779-91162798 None:intergenic 50.0%
GTAACCCTCCCTATTGCTAG+GGG + chr3_1:91162780-91162799 None:intergenic 50.0%
GAGTAACCCTCCCTATTGCT+AGG + chr3_1:91162782-91162801 None:intergenic 50.0%
AGGCTGAGTTTCCAACCCTT+AGG - chr3_1:91163440-91163459 Msa0387260:intron 50.0%
CACGGAGAGAGATGTACCTA+AGG + chr3_1:91163459-91163478 None:intergenic 50.0%
! AATGATTTAGGGCGGGGGAA+GGG + chr3_1:91163994-91164013 None:intergenic 50.0%
! AAATGATTTAGGGCGGGGGA+AGG + chr3_1:91163995-91164014 None:intergenic 50.0%
GTTGGTCCCACTACATAGAG+AGG - chr3_1:91164179-91164198 Msa0387260:intron 50.0%
CCTAGGTCCTCTCTATGTAG+TGG + chr3_1:91164189-91164208 None:intergenic 50.0%
CCACTACATAGAGAGGACCT+AGG - chr3_1:91164186-91164205 Msa0387260:intron 50.0%
!! ATGCTCACTGCTTTAGAGCC+TGG - chr3_1:91164422-91164441 Msa0387260:intron 50.0%
GCATAGAAGTGACTCATCCC+TGG + chr3_1:91164846-91164865 None:intergenic 50.0%
AACAGCAGCTCCCGATGAAA+TGG + chr3_1:91164921-91164940 None:intergenic 50.0%
AACAGCAGCTCCCGAAGAAA+TGG + chr3_1:91164963-91164982 None:intergenic 50.0%
GCTCCACTAGGTTCAGGATT+TGG + chr3_1:91165004-91165023 None:intergenic 50.0%
TGGAGAGCGGCAATAGACAT+TGG + chr3_1:91165095-91165114 None:intergenic 50.0%
CTGTGACACATAATGCTCCC+AGG + chr3_1:91165643-91165662 None:intergenic 50.0%
!! CTGGGAGCATTATGTGTCAC+AGG - chr3_1:91165641-91165660 Msa0387260:intron 50.0%
! CCATTTGATGTAGAGGGTGC+AGG + chr3_1:91165910-91165929 None:intergenic 50.0%
CCTGCACCCTCTACATCAAA+TGG - chr3_1:91165907-91165926 Msa0387260:CDS 50.0%
TTGGGATCAACCTTCACTGG+AGG + chr3_1:91165940-91165959 None:intergenic 50.0%
CCACTGAGCAGATCCCATTT+GGG + chr3_1:91165958-91165977 None:intergenic 50.0%
ACCACTGAGCAGATCCCATT+TGG + chr3_1:91165959-91165978 None:intergenic 50.0%
! AGGGCATTCTGTTGAGACAC+AGG + chr3_1:91166051-91166070 None:intergenic 50.0%
GGCTGGGTATTAACAGGAGT+TGG + chr3_1:91166111-91166130 None:intergenic 50.0%
GAAATTGGGGAGCTATTGGC+TGG + chr3_1:91166128-91166147 None:intergenic 50.0%
ATCATTTCCCCCTCCTCCTT+GGG - chr3_1:91166580-91166599 Msa0387260:intron 50.0%
TGAATTTCCCAAGGAGGAGG+GGG + chr3_1:91166590-91166609 None:intergenic 50.0%
GGTTGAATTTCCCAAGGAGG+AGG + chr3_1:91166593-91166612 None:intergenic 50.0%
! GCAGGTTGAATTTCCCAAGG+AGG + chr3_1:91166596-91166615 None:intergenic 50.0%
ACTGGACTACCATTGTCTGC+AGG + chr3_1:91166614-91166633 None:intergenic 50.0%
GACAATGGTAGTCCAGTAGC+TGG - chr3_1:91166617-91166636 Msa0387260:intron 50.0%
CAAACTGCTGCCTTTCCTCA+AGG - chr3_1:91166680-91166699 Msa0387260:intron 50.0%
TGCTTGAGGTCCTTGAGGAA+AGG + chr3_1:91166693-91166712 None:intergenic 50.0%
GCATATACATTCCAGCAGCC+TGG + chr3_1:91166727-91166746 None:intergenic 50.0%
GCAACACCCTGAATATACGG+AGG + chr3_1:91166815-91166834 None:intergenic 50.0%
!! CCGTATATTCAGGGTGTTGC+AGG - chr3_1:91166815-91166834 Msa0387260:intron 50.0%
! GGGTGTTGCAGGTCCTTATA+TGG - chr3_1:91166826-91166845 Msa0387260:intron 50.0%
TGCAGGTCCTTATATGGGCA+TGG - chr3_1:91166832-91166851 Msa0387260:intron 50.0%
TGCGGAACCATGCCCATATA+AGG + chr3_1:91166842-91166861 None:intergenic 50.0%
TGAGGATACATGGAAGCCAC+AGG + chr3_1:91166881-91166900 None:intergenic 50.0%
CAGCAACAGCAACAGCAACA+AGG - chr3_1:91166941-91166960 Msa0387260:intron 50.0%
GATGCAGCAGAAACCTGGTA+AGG + chr3_1:91167037-91167056 None:intergenic 50.0%
TGCCAACCGGCGATAGATTT+AGG - chr3_1:91167311-91167330 Msa0387260:five_prime_UTR 50.0%
AGCCTAAATCTATCGCCGGT+TGG + chr3_1:91167316-91167335 None:intergenic 50.0%
GGCATAGCTGGACAAACACG+TGG - chr3_1:91159689-91159708 Msa0387260:three_prime_UTR 55.0%
CTGGTGGCACGTTCAACCAA+AGG + chr3_1:91159949-91159968 None:intergenic 55.0%
ACCAATGAGGAAGTCGCTGG+TGG + chr3_1:91159965-91159984 None:intergenic 55.0%
AGGACCAATGAGGAAGTCGC+TGG + chr3_1:91159968-91159987 None:intergenic 55.0%
CTCTCTCGGCAACATGCATG+TGG + chr3_1:91161584-91161603 None:intergenic 55.0%
CATGCATGTTGCCGAGAGAG+AGG - chr3_1:91161584-91161603 Msa0387260:intron 55.0%
ACGTACCAGCAGTTCCTGGT+AGG + chr3_1:91161839-91161858 None:intergenic 55.0%
GACTATCCGTGAGACTCCTC+CGG - chr3_1:91162596-91162615 Msa0387260:CDS 55.0%
GTTCCCACAAACACGGTCAC+CGG + chr3_1:91162618-91162637 None:intergenic 55.0%
TGTGGGAACACCCAATTGGC+AGG - chr3_1:91162629-91162648 Msa0387260:intron 55.0%
AGTCCCCCTAGCAATAGGGA+GGG - chr3_1:91162773-91162792 Msa0387260:intron 55.0%
TCCACTGAGGACTCAGCTTC+CGG + chr3_1:91163421-91163440 None:intergenic 55.0%
TGGAAACTCAGCCTCCACTG+AGG + chr3_1:91163434-91163453 None:intergenic 55.0%
! ATGATTTAGGGCGGGGGAAG+GGG + chr3_1:91163993-91164012 None:intergenic 55.0%
TGGTTCAGCTCCTCCAGTGA+AGG - chr3_1:91165927-91165946 Msa0387260:intron 55.0%
CCCAAATGGGATCTGCTCAG+TGG - chr3_1:91165955-91165974 Msa0387260:intron 55.0%
CTGGCAGGCTGTTGTTCTAC+AGG + chr3_1:91166027-91166046 None:intergenic 55.0%
! TGTTGAGACACAGGACTGGC+AGG + chr3_1:91166042-91166061 None:intergenic 55.0%
TGCCTAATGTGGGGTCACCT+CGG - chr3_1:91166196-91166215 Msa0387260:intron 55.0%
TACCGAGGTGACCCCACATT+AGG + chr3_1:91166201-91166220 None:intergenic 55.0%
CTCAAAACACAGGTCCTGCC+TGG - chr3_1:91166238-91166257 Msa0387260:intron 55.0%
AACACAGGTCCTGCCTGGAA+TGG - chr3_1:91166243-91166262 Msa0387260:CDS 55.0%
ACAACCTGACCATTCCAGGC+AGG + chr3_1:91166255-91166274 None:intergenic 55.0%
CTGCACAACCTGACCATTCC+AGG + chr3_1:91166259-91166278 None:intergenic 55.0%
GATCATTTCCCCCTCCTCCT+TGG - chr3_1:91166579-91166598 Msa0387260:intron 55.0%
!! GGGTATTGACTGCCAGCTAC+TGG + chr3_1:91166632-91166651 None:intergenic 55.0%
!! ACTGTGACTTGCACTGGCTG+CGG + chr3_1:91166653-91166672 None:intergenic 55.0%
CCTCAAGGACCTCAAGCAAC+CGG - chr3_1:91166695-91166714 Msa0387260:intron 55.0%
CTCAAGGACCTCAAGCAACC+GGG - chr3_1:91166696-91166715 Msa0387260:intron 55.0%
TGGTCATACCCGGTTGCTTG+AGG + chr3_1:91166707-91166726 None:intergenic 55.0%
TCAAGCAACCGGGTATGACC+AGG - chr3_1:91166706-91166725 Msa0387260:intron 55.0%
ACGGAGGCTGCAAACCCAAT+TGG + chr3_1:91166799-91166818 None:intergenic 55.0%
GCTGCATCTTATGCGCCATC+CGG - chr3_1:91167049-91167068 Msa0387260:CDS 55.0%
! TGGTTTGGAAGGCGGCTTTC+CGG + chr3_1:91167071-91167090 None:intergenic 55.0%
AAAGCCGCCTTCCAAACCAG+AGG - chr3_1:91167072-91167091 Msa0387260:exon 55.0%
GCCACCAGCGACTTCCTCAT+TGG - chr3_1:91159961-91159980 Msa0387260:CDS 60.0%
GAGGCAGACGCCGTTCCAAA+AGG - chr3_1:91160725-91160744 Msa0387260:CDS 60.0%
TGCTGCCTACCAGGAACTGC+TGG - chr3_1:91161831-91161850 Msa0387260:intron 60.0%
TCCTCCGGTGACCGTGTTTG+TGG - chr3_1:91162611-91162630 Msa0387260:CDS 60.0%
CCTCCGGTGACCGTGTTTGT+GGG - chr3_1:91162612-91162631 Msa0387260:CDS 60.0%
GAGTCCCCCTAGCAATAGGG+AGG - chr3_1:91162772-91162791 Msa0387260:intron 60.0%
ACCGGAAGCTGAGTCCTCAG+TGG - chr3_1:91163417-91163436 Msa0387260:intron 60.0%
GGAAGCTGAGTCCTCAGTGG+AGG - chr3_1:91163420-91163439 Msa0387260:intron 60.0%
CTATGTTTAGGGGCTCCGGC+AGG - chr3_1:91164609-91164628 Msa0387260:intron 60.0%
AGGTCCTGCCTGGAATGGTC+AGG - chr3_1:91166248-91166267 Msa0387260:CDS 60.0%
!! CTGTGACTTGCACTGGCTGC+GGG + chr3_1:91166652-91166671 None:intergenic 60.0%
CCGGTTGCTTGAGGTCCTTG+AGG + chr3_1:91166698-91166717 None:intergenic 60.0%
TCCAGCAGCCTGGTCATACC+CGG + chr3_1:91166717-91166736 None:intergenic 60.0%
TTGGAAGGCGGCTTTCCGGA+TGG + chr3_1:91167067-91167086 None:intergenic 60.0%
!! CTCGGGCCTGGAGTGGATTT+TGG + chr3_1:91167139-91167158 None:intergenic 60.0%
CGGTCACCGGAGGAGTCTCA+CGG + chr3_1:91162605-91162624 None:intergenic 65.0%
CCCACAAACACGGTCACCGG+AGG + chr3_1:91162615-91162634 None:intergenic 65.0%
! TTTAGGGCGGGGGAAGGGGT+TGG + chr3_1:91163989-91164008 None:intergenic 65.0%
ACCGGGTATGACCAGGCTGC+TGG - chr3_1:91166713-91166732 Msa0387260:intron 65.0%
CTATCAGCTCGGGCCTGGAG+TGG + chr3_1:91167146-91167165 None:intergenic 65.0%
AAGGGCTATCAGCTCGGGCC+TGG + chr3_1:91167151-91167170 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr3_1 gene 91159644 91167366 91159644 ID=Msa0387260;Name=Msa0387260
chr3_1 mRNA 91159644 91167366 91159644 ID=Msa0387260-mRNA-1;Parent=Msa0387260;Name=Msa0387260-mRNA-1;_AED=0.07;_eAED=0.07;_QI=293|0.8|0.90|0.90|1|1|11|204|695
chr3_1 exon 91159644 91160446 91159644 ID=Msa0387260-mRNA-1:exon:25333;Parent=Msa0387260-mRNA-1
chr3_1 exon 91160698 91161155 91160698 ID=Msa0387260-mRNA-1:exon:25332;Parent=Msa0387260-mRNA-1
chr3_1 exon 91161924 91162163 91161924 ID=Msa0387260-mRNA-1:exon:25331;Parent=Msa0387260-mRNA-1
chr3_1 exon 91162306 91162391 91162306 ID=Msa0387260-mRNA-1:exon:25330;Parent=Msa0387260-mRNA-1
chr3_1 exon 91162556 91162637 91162556 ID=Msa0387260-mRNA-1:exon:25329;Parent=Msa0387260-mRNA-1
chr3_1 exon 91163549 91163709 91163549 ID=Msa0387260-mRNA-1:exon:25328;Parent=Msa0387260-mRNA-1
chr3_1 exon 91165158 91165271 91165158 ID=Msa0387260-mRNA-1:exon:25327;Parent=Msa0387260-mRNA-1
chr3_1 exon 91165369 91165467 91165369 ID=Msa0387260-mRNA-1:exon:25326;Parent=Msa0387260-mRNA-1
chr3_1 exon 91165867 91165945 91165867 ID=Msa0387260-mRNA-1:exon:25325;Parent=Msa0387260-mRNA-1
chr3_1 exon 91166242 91166310 91166242 ID=Msa0387260-mRNA-1:exon:25324;Parent=Msa0387260-mRNA-1
chr3_1 exon 91166973 91167366 91166973 ID=Msa0387260-mRNA-1:exon:25323;Parent=Msa0387260-mRNA-1
chr3_1 five_prime_UTR 91167074 91167366 91167074 ID=Msa0387260-mRNA-1:five_prime_utr;Parent=Msa0387260-mRNA-1
chr3_1 CDS 91166973 91167073 91166973 ID=Msa0387260-mRNA-1:cds;Parent=Msa0387260-mRNA-1
chr3_1 CDS 91166242 91166310 91166242 ID=Msa0387260-mRNA-1:cds;Parent=Msa0387260-mRNA-1
chr3_1 CDS 91165867 91165945 91165867 ID=Msa0387260-mRNA-1:cds;Parent=Msa0387260-mRNA-1
chr3_1 CDS 91165369 91165467 91165369 ID=Msa0387260-mRNA-1:cds;Parent=Msa0387260-mRNA-1
chr3_1 CDS 91165158 91165271 91165158 ID=Msa0387260-mRNA-1:cds;Parent=Msa0387260-mRNA-1
chr3_1 CDS 91163549 91163709 91163549 ID=Msa0387260-mRNA-1:cds;Parent=Msa0387260-mRNA-1
chr3_1 CDS 91162556 91162637 91162556 ID=Msa0387260-mRNA-1:cds;Parent=Msa0387260-mRNA-1
chr3_1 CDS 91162306 91162391 91162306 ID=Msa0387260-mRNA-1:cds;Parent=Msa0387260-mRNA-1
chr3_1 CDS 91161924 91162163 91161924 ID=Msa0387260-mRNA-1:cds;Parent=Msa0387260-mRNA-1
chr3_1 CDS 91160698 91161155 91160698 ID=Msa0387260-mRNA-1:cds;Parent=Msa0387260-mRNA-1
chr3_1 CDS 91159848 91160446 91159848 ID=Msa0387260-mRNA-1:cds;Parent=Msa0387260-mRNA-1
chr3_1 three_prime_UTR 91159644 91159847 91159644 ID=Msa0387260-mRNA-1:three_prime_utr;Parent=Msa0387260-mRNA-1
Gene Sequence

>Msa0387260

ATGGTGAATCCTTTGGTTGAACGTGCCACCAGCGACTTCCTCATTGGTCCTGATTGGGCTTTGAATCTCGAGATCTGTGATGTACTCAATCGTGATCCCGGAGTTGCTTTGAGGCGCGATAAATGTGAGGCAGACGCCGTTCCAAAAGGACCATTAGAGCATTCGTTCAGGCAAGCAAAGCATATTGTTAAAGGTTTAAAGAAGCGGATTGGACACAGAAATTCTAAAATTCAAATTCTTGCGCTAACTCTGCTGGAGACAATCATAAAGAATTGCGGGGACATTGTCCACATGCATGTTGCCGAGAGAGAGGTTCTTCATGAGATGGTGAAAATAGTAAAGAAGAAGCCCGATTATCATGTCCGAGAGAAGATACTGGCTCTTATTGATACTTGGCAAGAAGCTTTTGGAGGCCCAAGGGCAAAATATCCACAGTATTATGCTGCCTACCAGGAACTGCTGCATGCGGGGGCTCCGTTCCCTTCAAGATCTGAGCAATCTGCACCTGTATTCACACCAGTACAAACACAACCATTGGGATCATACCCTCAAAATATACGTGATTCTGATTCTCGGCAACCGGAAGCTGAGTCCTCAGTGGAGGCTGAGTTTCCAACCCTTAGTTTGACCGAAATTCAGAATGCACGTGGTATTATGGACGTTCTTGCAGAAATGCTCACTGCTTTAGAGCCTGGTAACAAAGAAGGGCTCCGGCAGGAAGTTATTGTTGATTTGGTGGAGCAATGTCGCACATACAAGCAAAGAGTGGTACACCTTGTTAATTCAACTTCGGATGAGTCACTTCTATGCCAAGGACTAGCGCTTAATGATGATCTGCAGCGTGTACTTTCCAAGCATGAATCCATTTCATCGGGAGCTGCTGTTCAAAATGACAAGCATGAATCCATTTCTTCGGGAGCTGCTGTTCAAAATCACACTGAGAAACCAAATCCTGAACCTAGTGGAGCACTTATAGATGTTGATGGTCCTTTGATTGATACTGGAGATACTAGTAAACAAACTGATGCGAGATCATCTTCTAGTGCTGAAGCAGGGTCTCAAACATTTAATCAATTGTTGCTTCCTGCACCCTCTACATCAAATGGTTCAGCTCCTCCAGTGAAGGTTGATCCCAAATGGGATCTGCTCAGTGGTGAAGAGTATAACTCACCAAAAGCAGATAATTCACTTGCCCTTGTTCCTGTAGAACAACAGCCTGCCAGTCCTGTGTCTCAACAGAATGCCCTTGTTCCTTTTGATTTGTTTTCTAATGGAAACATTGTGCCAACTCCTGTTAATACCCAGCCAATAGCTCCCCAATTTCAACAACAAACTATCATATCTCAAGGTGTATTTTACCCGAATGGAAGTATGCCTAATGTGGGGTCACCTCGGTACGAGCAATCACTATATACTCAAAACACAGGTCCTGCCTGGAATGGTCAGGTTGTGCAGCAGCAACAGCAACAGCCACTTTCACCTGTTTATGGTACACAAAGTGGCGGATCATTTCCCCCTCCTCCTTGGGAAATTCAACCTGCAGACAATGGTAGTCCAGTAGCTGGCAGTCAATACCCGCAGCCAGTGCAAGTCACAGTACATGTACAAACTGCTGCCTTTCCTCAAGGACCTCAAGCAACCGGGTATGACCAGGCTGCTGGAATGTATATGCAGCCAAATGCTAGCCATTTCTCTTCAATCAATAACCAGGTTCAAAGTAACCAATTGGGTTTGCAGCCTCCGTATATTCAGGGTGTTGCAGGTCCTTATATGGGCATGGTTCCGCATCAAATGCAAAATGGTCCTGTGGCTTCCATGTATCCTCAACAGATGTATGGTAACCAATTTATGGGATATGGCTATGGTCAGCAACAGCAACAGCAACAGCAACAAGGGCCTCAATATATCGAGCAGCAAATGTATGGTTTATCTGTGAGAGATGATAATGCTTCAAGAAATCCTTACCAGGTTTCTGCTGCATCTTATGCGCCATCCGGAAAGCCGCCTTCCAAACCAGAGGATAAGTTATTTGGGGACCTTATTGACTTTTCAAAAGTGAAACCAAAATCCACTCCAGGCCCGAGCTGA
Protein sequence

>Msa0387260

MVNPLVERATSDFLIGPDWALNLEICDVLNRDPGVALRRDKCEADAVPKGPLEHSFRQAKHIVKGLKKRIGHRNSKIQILALTLLETIIKNCGDIVHMHVAEREVLHEMVKIVKKKPDYHVREKILALIDTWQEAFGGPRAKYPQYYAAYQELLHAGAPFPSRSEQSAPVFTPVQTQPLGSYPQNIRDSDSRQPEAESSVEAEFPTLSLTEIQNARGIMDVLAEMLTALEPGNKEGLRQEVIVDLVEQCRTYKQRVVHLVNSTSDESLLCQGLALNDDLQRVLSKHESISSGAAVQNDKHESISSGAAVQNHTEKPNPEPSGALIDVDGPLIDTGDTSKQTDARSSSSAEAGSQTFNQLLLPAPSTSNGSAPPVKVDPKWDLLSGEEYNSPKADNSLALVPVEQQPASPVSQQNALVPFDLFSNGNIVPTPVNTQPIAPQFQQQTIISQGVFYPNGSMPNVGSPRYEQSLYTQNTGPAWNGQVVQQQQQQPLSPVYGTQSGGSFPPPPWEIQPADNGSPVAGSQYPQPVQVTVHVQTAAFPQGPQATGYDQAAGMYMQPNASHFSSINNQVQSNQLGLQPPYIQGVAGPYMGMVPHQMQNGPVASMYPQQMYGNQFMGYGYGQQQQQQQQQGPQYIEQQMYGLSVRDDNASRNPYQVSAASYAPSGKPPSKPEDKLFGDLIDFSKVKPKSTPGPS*