AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1001780


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1001780 MtrunA17_Chr6g0488891 97.462 197 5 0 51 247 244 440 2.24e-139 398
Msa1001780 MtrunA17_CPg0492871 31.967 122 67 1 140 245 107 228 4.60e-17 77.4
Msa1001780 MtrunA17_Chr4g0015721 31.967 122 67 1 140 245 107 228 4.60e-17 77.4
Msa1001780 MtrunA17_Chr4g0016811 31.967 122 67 1 140 245 116 237 4.72e-17 77.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1001780 AT4G31040.1 82.741 197 34 0 51 247 242 438 5.43e-121 352
Msa1001780 ATCG00530.1 33.654 104 69 0 142 245 125 228 2.47e-15 73.2

Find 64 sgRNAs with CRISPR-Local

Find 534 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGAGATTGAATATTTGTTTA+TGG 0.174829 6_4:-85663310 Msa1001780:three_prime_UTR
TGAAATATACTCATCACTTT+TGG 0.223046 6_4:+85663753 None:intergenic
ATCTTCTCACGTCGAGCATT+TGG 0.232890 6_4:+85669464 None:intergenic
TTGATGTAGTAGTTATTTAT+TGG 0.251952 6_4:+85663434 None:intergenic
GAGATAATTGTCGAGCATTA+TGG 0.263013 6_4:-85665520 Msa1001780:CDS
ATAAACAATATTTCTGATAC+TGG 0.274252 6_4:-85666323 Msa1001780:CDS
CTACACACTCGTTCTGGTTC+TGG 0.274477 6_4:+85670874 None:intergenic
GTAGCTTTGCTCAAATTTAC+TGG 0.274892 6_4:-85666356 Msa1001780:CDS
CTCTTTCTGATAATGAGGTT+TGG 0.338311 6_4:-85669360 Msa1001780:CDS
ACTCGTTCTGGTTCTGGTTG+TGG 0.366798 6_4:+85670880 None:intergenic
TTTGCTACGGCTTTATCAAC+TGG 0.375119 6_4:-85663675 Msa1001780:three_prime_UTR
ACTTTACTACACACTCGTTC+TGG 0.381865 6_4:+85670868 None:intergenic
TCTTCTCACGTCGAGCATTT+GGG 0.383872 6_4:+85669465 None:intergenic
ATGGAGGGTGCTTCTTCATA+AGG 0.384059 6_4:-85663291 Msa1001780:three_prime_UTR
CTAGTTTACAATTTCATGTC+TGG 0.384336 6_4:-85663715 Msa1001780:exon
TGGTACAGTCTTCACATATC+TGG 0.387506 6_4:+85669495 None:intergenic
AGATAATTGTCGAGCATTAT+GGG 0.402075 6_4:-85665519 Msa1001780:CDS
TTTGAGCTTGAGGTAGAGAT+TGG 0.410529 6_4:-85669394 Msa1001780:CDS
ATGCATACAAGAATGAGGTT+AGG 0.412627 6_4:+85663633 None:intergenic
TGGAGGGTGCTTCTTCATAA+GGG 0.413115 6_4:-85663290 Msa1001780:three_prime_UTR
TGCAGGTATCATTCTGAATC+TGG 0.421866 6_4:-85665559 Msa1001780:intron
GTTGAGAGATGAGTGGAGAC+TGG 0.423027 6_4:-85668574 Msa1001780:CDS
TTGATGCATGCGTGAAACTT+TGG 0.441774 6_4:-85665441 Msa1001780:CDS
TGATGCATGCGTGAAACTTT+GGG 0.444730 6_4:-85665440 Msa1001780:intron
TCCACCTCTTTCTGATAATG+AGG 0.446773 6_4:-85669365 Msa1001780:CDS
TGCATACAAGAATGAGGTTA+GGG 0.446807 6_4:+85663634 None:intergenic
TTCTGATAATGAGGTTTGGT+GGG 0.458984 6_4:-85669356 Msa1001780:CDS
TTATGGGCTTGAAGTTGATC+AGG 0.463345 6_4:-85665503 Msa1001780:CDS
CTATAGTACAAGGCGGTTCA+AGG 0.466591 6_4:-85663495 Msa1001780:three_prime_UTR
GTTCCACGAGTTTCAGCTAC+TGG 0.467289 6_4:-85663572 Msa1001780:three_prime_UTR
GTAGAGCATTTGCCAACATA+TGG 0.472062 6_4:-85668545 Msa1001780:CDS
ATGAGGTTTGGTGGGAATTG+CGG 0.491615 6_4:-85669348 Msa1001780:CDS
CAATTTCATGTCTGGCAAAG+TGG 0.494191 6_4:-85663707 Msa1001780:three_prime_UTR
ATGTAGTAGTTATTTATTGG+CGG 0.497990 6_4:+85663437 None:intergenic
TCTCTACCTCAAGCTCAAAT+CGG 0.502478 6_4:+85669398 None:intergenic
TTTCTGATAATGAGGTTTGG+TGG 0.513096 6_4:-85669357 Msa1001780:CDS
GTGGATTCAACTGTTTGCTA+CGG 0.526344 6_4:-85663688 Msa1001780:three_prime_UTR
CTTTATGTGCACATAAAGAA+TGG 0.528373 6_4:-85663470 Msa1001780:three_prime_UTR
GATTGAATATTTGTTTATGG+AGG 0.541104 6_4:-85663307 Msa1001780:three_prime_UTR
TTTACTGGTTCTATAGTACA+AGG 0.545745 6_4:-85663505 Msa1001780:three_prime_UTR
CAAACCTCATTATCAGAAAG+AGG 0.554822 6_4:+85669361 None:intergenic
AACAGTTACAATTACACCGT+TGG 0.559401 6_4:+85663592 None:intergenic
AATAAATGCATACAAGAATG+AGG 0.570300 6_4:+85663628 None:intergenic
TTGCTACGGCTTTATCAACT+GGG 0.570674 6_4:-85663674 Msa1001780:three_prime_UTR
AAATTCCTGTGGGTTCGCAC+AGG 0.572231 6_4:+85663526 None:intergenic
ACGCATGCATCAACGATGAC+TGG 0.582155 6_4:+85665451 None:intergenic
ATTGATATTGAAATGTCCAA+CGG 0.583439 6_4:-85663608 Msa1001780:three_prime_UTR
ATTGAATATTTGTTTATGGA+GGG 0.584106 6_4:-85663306 Msa1001780:three_prime_UTR
GCAGACCTGTGCGAACCCAC+AGG 0.595390 6_4:-85663531 Msa1001780:three_prime_UTR
CAATATTTCTGATACTGGGA+AGG 0.598189 6_4:-85666318 Msa1001780:CDS
GATTAGAGTTGAGAGATGAG+TGG 0.598836 6_4:-85668581 Msa1001780:CDS
GGAGGGTGCTTCTTCATAAG+GGG 0.598914 6_4:-85663289 Msa1001780:three_prime_UTR
TAAACAATATTTCTGATACT+GGG 0.599714 6_4:-85666322 Msa1001780:CDS
GGTATCATTCTGAATCTGGT+TGG 0.602489 6_4:-85665555 Msa1001780:CDS
TAGAACCAGTAAAATTCCTG+TGG 0.609303 6_4:+85663515 None:intergenic
TCGAGCATTTGGGCGGCAAG+TGG 0.610025 6_4:+85669475 None:intergenic
GAAAAGCCGATTTGAGCTTG+AGG 0.623474 6_4:-85669404 Msa1001780:CDS
AACTGTGTCAGACCATATGT+TGG 0.629492 6_4:+85668533 None:intergenic
ACCTCATTATCAGAAAGAGG+TGG 0.641204 6_4:+85669364 None:intergenic
AGAACCAGTAAAATTCCTGT+GGG 0.644208 6_4:+85663516 None:intergenic
TCTCACGTCGAGCATTTGGG+CGG 0.653413 6_4:+85669468 None:intergenic
GAACCAGTAGCTGAAACTCG+TGG 0.676599 6_4:+85663569 None:intergenic
GAAAACAAAAGCAATAGACA+TGG 0.697100 6_4:-85670793 Msa1001780:intron
ACTGGTTCTATAGTACAAGG+CGG 0.732904 6_4:-85663502 Msa1001780:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! CAAAAAAAAAAAAAATAGAA+GGG + chr6_4:85665570-85665589 None:intergenic 10.0%
!! TATTTCCTAAATATATTAAA+TGG + chr6_4:85665898-85665917 None:intergenic 10.0%
!! TAATATATTTAGGAAATATT+TGG - chr6_4:85665900-85665919 Msa1001780:intron 10.0%
!!! AAAAGACATTTTTAATATTA+AGG - chr6_4:85666219-85666238 Msa1001780:intron 10.0%
!! AATATTAAGAGATATAAATT+AGG - chr6_4:85667305-85667324 Msa1001780:intron 10.0%
!! AATTATAAAATGAATATACA+AGG - chr6_4:85668893-85668912 Msa1001780:intron 10.0%
!! ATTATAAAATGAATATACAA+GGG - chr6_4:85668894-85668913 Msa1001780:intron 10.0%
!! TAATAATTATGATTAACTAA+TGG - chr6_4:85669081-85669100 Msa1001780:intron 10.0%
!!! TAAACAAAGCTATTAATTTT+AGG - chr6_4:85664526-85664545 Msa1001780:intron 15.0%
!!! AATCTATAATACTTTAAGAT+AGG + chr6_4:85665126-85665145 None:intergenic 15.0%
!! GCAAAAAAAAAAAAAATAGA+AGG + chr6_4:85665571-85665590 None:intergenic 15.0%
!! ATAAACATATTAAATATCCT+TGG - chr6_4:85667773-85667792 Msa1001780:intron 15.0%
!! TACTTTCAAATATTTCTTAA+TGG + chr6_4:85668293-85668312 None:intergenic 15.0%
!! TATAAATCTGTTAAAGAAAT+TGG - chr6_4:85668819-85668838 Msa1001780:intron 15.0%
!!! GTTTATTTGAAATTTATCCT+TGG - chr6_4:85663660-85663679 Msa1001780:three_prime_UTR 20.0%
!! TATATAAGTAAATCTGTAGA+GGG - chr6_4:85663691-85663710 Msa1001780:three_prime_UTR 20.0%
!! TAAAGAATCATTAAACTAAG+AGG + chr6_4:85664477-85664496 None:intergenic 20.0%
!! TGTTAGTGATCATTAAAATT+AGG - chr6_4:85664960-85664979 Msa1001780:intron 20.0%
!! AATATCTTAACTTATCTCTT+AGG - chr6_4:85665085-85665104 Msa1001780:intron 20.0%
!! ATAGATTATCTCTTAGTATT+AGG - chr6_4:85665139-85665158 Msa1001780:intron 20.0%
!! TAGACAATTTATAAAACACT+AGG + chr6_4:85665251-85665270 None:intergenic 20.0%
!!! AAGACTTTTTATCATGAATA+TGG + chr6_4:85665279-85665298 None:intergenic 20.0%
!! AAAGGTGAAAATTTATGATA+AGG + chr6_4:85665325-85665344 None:intergenic 20.0%
!! TAAACTTGATGAAGATTAAA+GGG + chr6_4:85665378-85665397 None:intergenic 20.0%
!! AAAAAAATAGAAGGGAAATA+AGG + chr6_4:85665562-85665581 None:intergenic 20.0%
!! AAAAATAACAGTGATGTTTA+TGG + chr6_4:85665790-85665809 None:intergenic 20.0%
!! GACTTCCATTTAATATATTT+AGG - chr6_4:85665890-85665909 Msa1001780:intron 20.0%
!! TATTTAGGAAATATTTGGTT+TGG - chr6_4:85665905-85665924 Msa1001780:intron 20.0%
!!! GTCTAAATAAATGTTGTTTT+AGG - chr6_4:85665932-85665951 Msa1001780:intron 20.0%
!!! TATTTTTCAAATCAAACTCA+AGG - chr6_4:85666073-85666092 Msa1001780:intron 20.0%
!! TTAATATTAAGGTGATACAA+AGG - chr6_4:85666230-85666249 Msa1001780:intron 20.0%
!! AAAAAGTTATAAATAACACG+TGG - chr6_4:85666619-85666638 Msa1001780:intron 20.0%
!! TATGCTGAATATATATGAAT+AGG - chr6_4:85666736-85666755 Msa1001780:intron 20.0%
!! TAAGATACTATCATATATTC+TGG - chr6_4:85667355-85667374 Msa1001780:intron 20.0%
!!! GTTTCTCTTATAGTTTTTAA+AGG + chr6_4:85667461-85667480 None:intergenic 20.0%
!! TAATGAGTTAGATAGAAATA+TGG - chr6_4:85667502-85667521 Msa1001780:intron 20.0%
!!! ATAAACAATATTTCTGATAC+TGG - chr6_4:85667856-85667875 Msa1001780:intron 20.0%
!!! TAAACAATATTTCTGATACT+GGG - chr6_4:85667857-85667876 Msa1001780:intron 20.0%
!! ATAGATAACAATTATCAAGT+TGG + chr6_4:85667937-85667956 None:intergenic 20.0%
!! ATAGGTTTATTAAATCAAGT+AGG + chr6_4:85668544-85668563 None:intergenic 20.0%
!! AAGAGAAGCTAAAATAAAAT+AGG + chr6_4:85668562-85668581 None:intergenic 20.0%
!! AAAGCAAACAAAAATAGTAA+TGG + chr6_4:85668705-85668724 None:intergenic 20.0%
!! AGTGAAATACAAAAAGTTAA+AGG - chr6_4:85669045-85669064 Msa1001780:intron 20.0%
!! GTGAAATACAAAAAGTTAAA+GGG - chr6_4:85669046-85669065 Msa1001780:intron 20.0%
!! TGAAATACAAAAAGTTAAAG+GGG - chr6_4:85669047-85669066 Msa1001780:intron 20.0%
!! AATTTGATTGGATTCTAAAT+AGG - chr6_4:85669210-85669229 Msa1001780:intron 20.0%
!!! AATGATACAATCTTTGATTT+TGG + chr6_4:85669481-85669500 None:intergenic 20.0%
!! TATCATGTCATATCTAATAT+GGG + chr6_4:85669855-85669874 None:intergenic 20.0%
!!! TTTTTTTAGAAAGCCAAAAT+AGG + chr6_4:85670041-85670060 None:intergenic 20.0%
!! GTAAATATTATTCAAGACAA+AGG + chr6_4:85670275-85670294 None:intergenic 20.0%
!! TGTCTTGAATAATATTTACA+AGG - chr6_4:85670276-85670295 Msa1001780:intron 20.0%
!! TTGATGTAGTAGTTATTTAT+TGG + chr6_4:85670748-85670767 None:intergenic 20.0%
!! TGAGATTGAATATTTGTTTA+TGG - chr6_4:85670869-85670888 Msa1001780:CDS 20.0%
!! ATTGAATATTTGTTTATGGA+GGG - chr6_4:85670873-85670892 Msa1001780:CDS 20.0%
! ACTTATATAGAATACTACCA+AGG + chr6_4:85663680-85663699 None:intergenic 25.0%
! CTATATAAGTAAATCTGTAG+AGG - chr6_4:85663690-85663709 Msa1001780:three_prime_UTR 25.0%
!!! TTATTTGTTAGTACCCTTTT+AGG - chr6_4:85663735-85663754 Msa1001780:CDS 25.0%
!!! TATTTGTTAGTACCCTTTTA+GGG - chr6_4:85663736-85663755 Msa1001780:CDS 25.0%
! GGTGAATATTATTAAGTAGA+TGG + chr6_4:85663827-85663846 None:intergenic 25.0%
!!! TAGTTTCTATTGTTTTATGC+TGG - chr6_4:85663856-85663875 Msa1001780:intron 25.0%
!!! TGATTGTTTTTCCTTCTAAT+TGG - chr6_4:85664641-85664660 Msa1001780:intron 25.0%
! TCAAAAACTTCAAATGATTG+AGG - chr6_4:85664739-85664758 Msa1001780:intron 25.0%
!! CATCTAACAATTTCCATTTT+GGG + chr6_4:85664939-85664958 None:intergenic 25.0%
!! TCATCTAACAATTTCCATTT+TGG + chr6_4:85664940-85664959 None:intergenic 25.0%
! TAACTTATCTCTTAGGATTT+AGG - chr6_4:85665092-85665111 Msa1001780:intron 25.0%
! ATGCTAACAATTAAGAAACA+TGG + chr6_4:85665167-85665186 None:intergenic 25.0%
! CTCGTAATTCTAATCAAATA+GGG + chr6_4:85665199-85665218 None:intergenic 25.0%
! ACTCGTAATTCTAATCAAAT+AGG + chr6_4:85665200-85665219 None:intergenic 25.0%
! GTGAAAATTTATGATAAGGA+CGG + chr6_4:85665321-85665340 None:intergenic 25.0%
! TTTAGCATGATTATTCGTAA+AGG + chr6_4:85665343-85665362 None:intergenic 25.0%
! GTAAACTTGATGAAGATTAA+AGG + chr6_4:85665379-85665398 None:intergenic 25.0%
!!! TTAGTGTCATTTGTTTAAGA+TGG - chr6_4:85665502-85665521 Msa1001780:CDS 25.0%
! GTATCAAAACATTTAGCATA+AGG + chr6_4:85665738-85665757 None:intergenic 25.0%
! GAAAATACGTTCAACAAAAT+TGG + chr6_4:85665765-85665784 None:intergenic 25.0%
! GAACAAACTTATTTATCTTG+TGG + chr6_4:85666010-85666029 None:intergenic 25.0%
!! TATCAGAAACAAAAGCATAA+TGG - chr6_4:85666574-85666593 Msa1001780:intron 25.0%
!! ATAAATAACACGTGGATTAA+AGG - chr6_4:85666627-85666646 Msa1001780:intron 25.0%
! GAAATGTGTAGATTAAAAGA+AGG - chr6_4:85667163-85667182 Msa1001780:intron 25.0%
! AATTAAGAGATTGAAACCTA+GGG - chr6_4:85667401-85667420 Msa1001780:intron 25.0%
!! CTATTCTTTTTACAAAAGTG+TGG + chr6_4:85667433-85667452 None:intergenic 25.0%
!! CACACTTTTGTAAAAAGAAT+AGG - chr6_4:85667431-85667450 Msa1001780:intron 25.0%
! AAACTATAAGAGAAACGATT+AGG - chr6_4:85667465-85667484 Msa1001780:intron 25.0%
! TGGTATATGATAGAACATTA+TGG - chr6_4:85667522-85667541 Msa1001780:intron 25.0%
! TGTTGTTGTATTTGTTCATT+TGG - chr6_4:85667600-85667619 Msa1001780:intron 25.0%
!! TTATCACAGATATTTTCCTA+GGG - chr6_4:85667899-85667918 Msa1001780:intron 25.0%
!!! AACAATTATCAAGTTGGAAA+AGG + chr6_4:85667931-85667950 None:intergenic 25.0%
! AATATGATACAATGTGGATA+TGG + chr6_4:85668158-85668177 None:intergenic 25.0%
! AATGCTTTGTATAATGTATC+AGG + chr6_4:85668333-85668352 None:intergenic 25.0%
! TGCCATTAAATGATTTAAGT+AGG - chr6_4:85668354-85668373 Msa1001780:intron 25.0%
! AGCCTACTTAAATCATTTAA+TGG + chr6_4:85668359-85668378 None:intergenic 25.0%
!! TTTACTCTTTTGTTGCATAT+TGG - chr6_4:85668591-85668610 Msa1001780:intron 25.0%
!! TTACTCTTTTGTTGCATATT+GGG - chr6_4:85668592-85668611 Msa1001780:intron 25.0%
!!! GCTAAATGTCATTGATTTTA+TGG - chr6_4:85668784-85668803 Msa1001780:intron 25.0%
!! CAACTAATGTTCAAGTTATT+AGG + chr6_4:85668851-85668870 None:intergenic 25.0%
! TTTACACTGTTGTGATTTAT+AGG + chr6_4:85669010-85669029 None:intergenic 25.0%
! GAAATACAAAAAGTTAAAGG+GGG - chr6_4:85669048-85669067 Msa1001780:intron 25.0%
! AAATTTCAATGTATCTCAGA+AGG + chr6_4:85669195-85669214 None:intergenic 25.0%
! GAGATACATTGAAATTTGAT+TGG - chr6_4:85669198-85669217 Msa1001780:intron 25.0%
!!! ACAGTTTTTTTTAATGTCAG+TGG - chr6_4:85669297-85669316 Msa1001780:intron 25.0%
!!! TTTTTTTTAATGTCAGTGGA+GGG - chr6_4:85669301-85669320 Msa1001780:intron 25.0%
!!! CCACTTATATATGCTTTTTT+GGG + chr6_4:85669698-85669717 None:intergenic 25.0%
!!! ACCACTTATATATGCTTTTT+TGG + chr6_4:85669699-85669718 None:intergenic 25.0%
!! AAAAAAGCATATATAAGTGG+TGG - chr6_4:85669698-85669717 Msa1001780:intron 25.0%
!! AAAAAGCATATATAAGTGGT+GGG - chr6_4:85669699-85669718 Msa1001780:intron 25.0%
!!! ACACTTCAGTTTTTCAATAT+TGG - chr6_4:85669806-85669825 Msa1001780:intron 25.0%
! GTATCATGTCATATCTAATA+TGG + chr6_4:85669856-85669875 None:intergenic 25.0%
! GAAAATCTGTTTATAAGTGA+CGG - chr6_4:85669876-85669895 Msa1001780:intron 25.0%
!! GAAATCTTCTTGATTTTACT+TGG - chr6_4:85669962-85669981 Msa1001780:intron 25.0%
!!! GACATATCTTGAAAGTATTT+TGG + chr6_4:85670066-85670085 None:intergenic 25.0%
!! TGACAGTACAATTTTTATAG+CGG + chr6_4:85670325-85670344 None:intergenic 25.0%
!!! AAATATACTCATCACTTTTG+GGG + chr6_4:85670427-85670446 None:intergenic 25.0%
!!! GAAATATACTCATCACTTTT+GGG + chr6_4:85670428-85670447 None:intergenic 25.0%
!! TGAAATATACTCATCACTTT+TGG + chr6_4:85670429-85670448 None:intergenic 25.0%
! AATAAATGCATACAAGAATG+AGG + chr6_4:85670554-85670573 None:intergenic 25.0%
! ATTGATATTGAAATGTCCAA+CGG - chr6_4:85670571-85670590 Msa1001780:intron 25.0%
! ATGTAGTAGTTATTTATTGG+CGG + chr6_4:85670745-85670764 None:intergenic 25.0%
! GATTGAATATTTGTTTATGG+AGG - chr6_4:85670872-85670891 Msa1001780:CDS 25.0%
! TTATTCAGCTTTTTGTGTTG+AGG + chr6_4:85663344-85663363 None:intergenic 30.0%
GAAAACAAAAGCAATAGACA+TGG - chr6_4:85663386-85663405 Msa1001780:three_prime_UTR 30.0%
AATGTTAAGAGTTGAAAGCA+TGG - chr6_4:85663412-85663431 Msa1001780:three_prime_UTR 30.0%
TATCTTCTTACTCTCTCTAT+TGG + chr6_4:85663559-85663578 None:intergenic 30.0%
AAGTAGATGGATACAGAAAA+AGG + chr6_4:85663814-85663833 None:intergenic 30.0%
CAATAGAAACTAGAGAATAG+TGG + chr6_4:85663848-85663867 None:intergenic 30.0%
! GGTTAATCTGAGATGTAAAA+AGG - chr6_4:85663917-85663936 Msa1001780:intron 30.0%
! TAATCTGAGATGTAAAAAGG+AGG - chr6_4:85663920-85663939 Msa1001780:intron 30.0%
! AGTTAGCTATCTAGCTTATA+AGG + chr6_4:85663955-85663974 None:intergenic 30.0%
! AGCTAGATAGCTAACTTTTA+AGG - chr6_4:85663959-85663978 Msa1001780:intron 30.0%
! GCTAGATAGCTAACTTTTAA+GGG - chr6_4:85663960-85663979 Msa1001780:intron 30.0%
!! TGATAGGATTTTGGGTATTA+TGG - chr6_4:85664141-85664160 Msa1001780:intron 30.0%
CTTAATTGCTAGATATCAAG+GGG + chr6_4:85664232-85664251 None:intergenic 30.0%
CCTTAATTGCTAGATATCAA+GGG + chr6_4:85664233-85664252 None:intergenic 30.0%
CCTTGATATCTAGCAATTAA+GGG - chr6_4:85664231-85664250 Msa1001780:intron 30.0%
! GATAAATATCCAAGCACTTT+TGG + chr6_4:85664263-85664282 None:intergenic 30.0%
! TTGCTTTCTTTTTCTTGAGT+AGG - chr6_4:85664568-85664587 Msa1001780:intron 30.0%
AAGTTGCTTAACCAATTAGA+AGG + chr6_4:85664655-85664674 None:intergenic 30.0%
! CATGCTCATTTAAGATAATC+AGG + chr6_4:85664890-85664909 None:intergenic 30.0%
TATCTTAAATGAGCATGAAG+TGG - chr6_4:85664893-85664912 Msa1001780:intron 30.0%
AATTCAGGAAATTCCCAAAA+TGG - chr6_4:85664923-85664942 Msa1001780:intron 30.0%
TATAAAAACACCTTGTGAAC+TGG - chr6_4:85665412-85665431 Msa1001780:intron 30.0%
AAAGATAATAAACCTAGTCC+TGG - chr6_4:85665451-85665470 Msa1001780:CDS 30.0%
AACAATAAACTAACAAGTCC+AGG + chr6_4:85665472-85665491 None:intergenic 30.0%
!!! TGCTATCCCAATTTTGAAAT+TGG + chr6_4:85665859-85665878 None:intergenic 30.0%
AATTTCAAAATTGGGATAGC+AGG - chr6_4:85665858-85665877 Msa1001780:intron 30.0%
ATTTCAAAATTGGGATAGCA+GGG - chr6_4:85665859-85665878 Msa1001780:intron 30.0%
! ATTTCAGGTAATGATCAAGA+AGG + chr6_4:85665967-85665986 None:intergenic 30.0%
! GTAGATGATATTGTCATTTC+AGG + chr6_4:85665982-85666001 None:intergenic 30.0%
AGGTTACACAAATCATTGTA+TGG + chr6_4:85666119-85666138 None:intergenic 30.0%
! TTTTTGCATAGACTTAGCAT+AGG + chr6_4:85666203-85666222 None:intergenic 30.0%
GAAAATCTATGGTAAGTTGT+TGG + chr6_4:85666430-85666449 None:intergenic 30.0%
! AACAGATTTTACTCCTTTTC+AGG + chr6_4:85666767-85666786 None:intergenic 30.0%
!! AGCAAATGTTACTTTCTTTG+AGG + chr6_4:85666831-85666850 None:intergenic 30.0%
ATTGAAAGTGGTCAAACTTA+TGG - chr6_4:85666966-85666985 Msa1001780:intron 30.0%
TGAGTGTCATATTGGATTAA+AGG - chr6_4:85667033-85667052 Msa1001780:intron 30.0%
GAGTGTCATATTGGATTAAA+GGG - chr6_4:85667034-85667053 Msa1001780:intron 30.0%
! TTCAACTAGTTCTTTGTATG+AGG - chr6_4:85667058-85667077 Msa1001780:intron 30.0%
ATGAGGAATGGTTTATTGAA+TGG - chr6_4:85667075-85667094 Msa1001780:intron 30.0%
TAATCTACACATTTCTTTCC+AGG + chr6_4:85667158-85667177 None:intergenic 30.0%
! CTACTGTTACATTTCCTTTT+TGG + chr6_4:85667201-85667220 None:intergenic 30.0%
ATACTATCATATATTCTGGC+AGG - chr6_4:85667359-85667378 Msa1001780:intron 30.0%
CAATTAAGAGATTGAAACCT+AGG - chr6_4:85667400-85667419 Msa1001780:intron 30.0%
ATGATAGAACATTATGGCAT+CGG - chr6_4:85667528-85667547 Msa1001780:intron 30.0%
GTTGTATTTGTTCATTTGGT+TGG - chr6_4:85667604-85667623 Msa1001780:intron 30.0%
CCTCCTAAAAAATTAGTGTT+CGG + chr6_4:85667632-85667651 None:intergenic 30.0%
CCAAAATAGGAAAACAACTT+AGG + chr6_4:85667710-85667729 None:intergenic 30.0%
!! CCTAAGTTGTTTTCCTATTT+TGG - chr6_4:85667707-85667726 Msa1001780:intron 30.0%
TAAACATCAACGACCAAAAT+AGG + chr6_4:85667723-85667742 None:intergenic 30.0%
! CTTATCACAGATATTTTCCT+AGG - chr6_4:85667898-85667917 Msa1001780:intron 30.0%
!!! TGTTTTGACTTTTGAATGCA+TGG + chr6_4:85668031-85668050 None:intergenic 30.0%
TCTAAATTCAACATACGACA+CGG + chr6_4:85668128-85668147 None:intergenic 30.0%
GACACAAATATGATACAATG+TGG + chr6_4:85668164-85668183 None:intergenic 30.0%
TTAAGTAAGGTAGACTTGAT+GGG - chr6_4:85668209-85668228 Msa1001780:intron 30.0%
TTCTATTAGCAACCTTTGAT+AGG - chr6_4:85668514-85668533 Msa1001780:CDS 30.0%
AGATAATTGTCGAGCATTAT+GGG - chr6_4:85668660-85668679 Msa1001780:intron 30.0%
GCAAACAAAAATAGTAATGG+CGG + chr6_4:85668702-85668721 None:intergenic 30.0%
! ATGTTCAAGTTATTAGGTAG+AGG + chr6_4:85668845-85668864 None:intergenic 30.0%
CTATTTGACCTCAATAATGT+GGG + chr6_4:85669155-85669174 None:intergenic 30.0%
TCTATTTGACCTCAATAATG+TGG + chr6_4:85669156-85669175 None:intergenic 30.0%
!!! GTTTTTTTTAATGTCAGTGG+AGG - chr6_4:85669300-85669319 Msa1001780:intron 30.0%
ACTACAAATTCCATATCTCA+AGG + chr6_4:85669448-85669467 None:intergenic 30.0%
ATTGTATCATTGTTGAGAGT+GGG - chr6_4:85669490-85669509 Msa1001780:CDS 30.0%
! CCCAAAAAAGCATATATAAG+TGG - chr6_4:85669695-85669714 Msa1001780:intron 30.0%
!! AAAACCGACTTGTATAGTAA+GGG + chr6_4:85669728-85669747 None:intergenic 30.0%
ATTTCCTAAACTAGGTTATG+AGG + chr6_4:85669947-85669966 None:intergenic 30.0%
TCAAGAAGATTTCCTAAACT+AGG + chr6_4:85669955-85669974 None:intergenic 30.0%
TTATGTTATCCTTTGACCTT+AGG - chr6_4:85669988-85670007 Msa1001780:intron 30.0%
!! GATATTAGATAATGGACCTA+AGG + chr6_4:85670007-85670026 None:intergenic 30.0%
!! TTGGCACTGATATTAGATAA+TGG + chr6_4:85670015-85670034 None:intergenic 30.0%
AGAAAGCCAAAATAGGATAT+TGG + chr6_4:85670034-85670053 None:intergenic 30.0%
!!! AAGGTTGCTATTTTGTTACA+TGG + chr6_4:85670182-85670201 None:intergenic 30.0%
ATAATATTCAAACCTACTGC+AGG + chr6_4:85670235-85670254 None:intergenic 30.0%
ACTGTCAATTACTTTGTAGT+TGG - chr6_4:85670338-85670357 Msa1001780:intron 30.0%
TGCATCACAAAAACAATAAG+GGG + chr6_4:85670378-85670397 None:intergenic 30.0%
CTGCATCACAAAAACAATAA+GGG + chr6_4:85670379-85670398 None:intergenic 30.0%
CTAGTTTACAATTTCATGTC+TGG - chr6_4:85670464-85670483 Msa1001780:intron 30.0%
!! TTTACTGGTTCTATAGTACA+AGG - chr6_4:85670674-85670693 Msa1001780:intron 30.0%
CTTTATGTGCACATAAAGAA+TGG - chr6_4:85670709-85670728 Msa1001780:intron 30.0%
! TGGTTTGCAAAATTGCTTGA+AGG - chr6_4:85663876-85663895 Msa1001780:intron 35.0%
CAAAATTGCTTGAAGGAAGA+TGG - chr6_4:85663883-85663902 Msa1001780:intron 35.0%
CTCAGATTAACCTCATTAAC+TGG + chr6_4:85663909-85663928 None:intergenic 35.0%
!!! TGGTGCTATGATAGGATTTT+GGG - chr6_4:85664133-85664152 Msa1001780:intron 35.0%
CCCTTGATATCTAGCAATTA+AGG - chr6_4:85664230-85664249 Msa1001780:intron 35.0%
CCCTTAATTGCTAGATATCA+AGG + chr6_4:85664234-85664253 None:intergenic 35.0%
TGATATCTAGCAATTAAGGG+AGG - chr6_4:85664234-85664253 Msa1001780:intron 35.0%
GATATCTAGCAATTAAGGGA+GGG - chr6_4:85664235-85664254 Msa1001780:intron 35.0%
! ACTGAATATTCAGAGCACTT+TGG + chr6_4:85664371-85664390 None:intergenic 35.0%
GTGTGTTTGTTTAAACTTGC+TGG - chr6_4:85664616-85664635 Msa1001780:intron 35.0%
CAAACCTCATTATCAGAAAG+AGG + chr6_4:85664821-85664840 None:intergenic 35.0%
! CTCTTTCTGATAATGAGGTT+TGG - chr6_4:85664819-85664838 Msa1001780:intron 35.0%
! TTTCTGATAATGAGGTTTGG+TGG - chr6_4:85664822-85664841 Msa1001780:intron 35.0%
! TTCTGATAATGAGGTTTGGT+GGG - chr6_4:85664823-85664842 Msa1001780:intron 35.0%
TGAAGTGGTACTTTGAATTC+AGG - chr6_4:85664908-85664927 Msa1001780:intron 35.0%
! ATATGGTCTGACACAGTTTT+CGG - chr6_4:85665651-85665670 Msa1001780:intron 35.0%
ATTTGTGTAACCTGCAAACA+AGG - chr6_4:85666126-85666145 Msa1001780:intron 35.0%
ATGCAAAAATGGCGTTTGTT+CGG + chr6_4:85666289-85666308 None:intergenic 35.0%
TCATCAGGGCTTTCTTTAAT+AGG - chr6_4:85666395-85666414 Msa1001780:intron 35.0%
ATCTATGGTAAGTTGTTGGT+GGG + chr6_4:85666426-85666445 None:intergenic 35.0%
AATCTATGGTAAGTTGTTGG+TGG + chr6_4:85666427-85666446 None:intergenic 35.0%
! CTTACCATAGATTTTCCAGA+AGG - chr6_4:85666434-85666453 Msa1001780:intron 35.0%
! TCTTCCTTCTGGAAAATCTA+TGG + chr6_4:85666441-85666460 None:intergenic 35.0%
! ATAGATTTTCCAGAAGGAAG+AGG - chr6_4:85666440-85666459 Msa1001780:intron 35.0%
!! GAAACAAAAGCATAATGGAC+AGG - chr6_4:85666579-85666598 Msa1001780:intron 35.0%
TGAATAGGTAGTACCTGAAA+AGG - chr6_4:85666751-85666770 Msa1001780:intron 35.0%
TCGCATCACTAACTATATCA+AGG + chr6_4:85666795-85666814 None:intergenic 35.0%
ATAGTTAGTGATGCGAAGTA+AGG - chr6_4:85666799-85666818 Msa1001780:intron 35.0%
TAGTTAGTGATGCGAAGTAA+GGG - chr6_4:85666800-85666819 Msa1001780:intron 35.0%
GGTATTCAAGAGTTCAAATG+GGG + chr6_4:85666895-85666914 None:intergenic 35.0%
GGGTATTCAAGAGTTCAAAT+GGG + chr6_4:85666896-85666915 None:intergenic 35.0%
TGGGTATTCAAGAGTTCAAA+TGG + chr6_4:85666897-85666916 None:intergenic 35.0%
CTGCTAAGTGTGTATTTCTT+GGG + chr6_4:85666916-85666935 None:intergenic 35.0%
CACAACAACGAAATTGAAAG+TGG - chr6_4:85666954-85666973 Msa1001780:intron 35.0%
! CTAGTTCTTTGTATGAGGAA+TGG - chr6_4:85667063-85667082 Msa1001780:intron 35.0%
GATGTTCAGGATTACTATCT+AGG + chr6_4:85667119-85667138 None:intergenic 35.0%
!!! CATTTCCTTTTTGGTTTCAC+AGG + chr6_4:85667192-85667211 None:intergenic 35.0%
CTAACAGTTCCAAACAGAAT+GGG + chr6_4:85667231-85667250 None:intergenic 35.0%
TCTAACAGTTCCAAACAGAA+TGG + chr6_4:85667232-85667251 None:intergenic 35.0%
!! TCTCTTAATTGCCGATTCAT+AGG + chr6_4:85667391-85667410 None:intergenic 35.0%
!!! GAGCCGAACACTAATTTTTT+AGG - chr6_4:85667626-85667645 Msa1001780:intron 35.0%
!!! CCGAACACTAATTTTTTAGG+AGG - chr6_4:85667629-85667648 Msa1001780:intron 35.0%
TGAGGAAAGAAACAAAACCA+AGG + chr6_4:85667793-85667812 None:intergenic 35.0%
! GTAGCTTTGCTCAAATTTAC+TGG - chr6_4:85667823-85667842 Msa1001780:intron 35.0%
! CAATATTTCTGATACTGGGA+AGG - chr6_4:85667861-85667880 Msa1001780:intron 35.0%
! CTTTTGAATGCATGGATACT+TGG + chr6_4:85668023-85668042 None:intergenic 35.0%
CGAGGTTTCATAGTTAAGTA+AGG - chr6_4:85668196-85668215 Msa1001780:intron 35.0%
GTTAAGTAAGGTAGACTTGA+TGG - chr6_4:85668208-85668227 Msa1001780:intron 35.0%
TAAGTAAGGTAGACTTGATG+GGG - chr6_4:85668210-85668229 Msa1001780:intron 35.0%
GGGGAATAAAAAAGAGTTAG+CGG - chr6_4:85668229-85668248 Msa1001780:intron 35.0%
TAAAAAAGAGTTAGCGGTAG+AGG - chr6_4:85668235-85668254 Msa1001780:intron 35.0%
AAAAAAGAGTTAGCGGTAGA+GGG - chr6_4:85668236-85668255 Msa1001780:intron 35.0%
GTATAATGTATCAGGTGCAA+AGG + chr6_4:85668325-85668344 None:intergenic 35.0%
! CAATCTTTTCCCATTTGAAG+GGG + chr6_4:85668383-85668402 None:intergenic 35.0%
! CCAATCTTTTCCCATTTGAA+GGG + chr6_4:85668384-85668403 None:intergenic 35.0%
! ACCAATCTTTTCCCATTTGA+AGG + chr6_4:85668385-85668404 None:intergenic 35.0%
!! GAAAAGATTGGTCTCGTATA+AGG - chr6_4:85668393-85668412 Msa1001780:intron 35.0%
CAAGTAGGAAATCCTATCAA+AGG + chr6_4:85668529-85668548 None:intergenic 35.0%
GAGATAATTGTCGAGCATTA+TGG - chr6_4:85668659-85668678 Msa1001780:intron 35.0%
! TATACCGCTTTAGCAGTTTT+GGG + chr6_4:85668973-85668992 None:intergenic 35.0%
CTGTTGTGATTTATAGGTAG+CGG + chr6_4:85669004-85669023 None:intergenic 35.0%
!! CAATTAGCAAATGATGGACA+AGG + chr6_4:85669114-85669133 None:intergenic 35.0%
! CTTGTCCATCATTTGCTAAT+TGG - chr6_4:85669112-85669131 Msa1001780:intron 35.0%
! TCCATCATTTGCTAATTGGT+TGG - chr6_4:85669116-85669135 Msa1001780:intron 35.0%
ACCAACCAATTAGCAAATGA+TGG + chr6_4:85669120-85669139 None:intergenic 35.0%
! ACTTTTTGCATCCTCTTCTT+CGG + chr6_4:85669238-85669257 None:intergenic 35.0%
AAGAAGAGGATGCAAAAAGT+TGG - chr6_4:85669238-85669257 Msa1001780:intron 35.0%
TCTCGAACATTGTAAACTAG+TGG + chr6_4:85669264-85669283 None:intergenic 35.0%
! ACTAGTTTACAATGTTCGAG+AGG - chr6_4:85669263-85669282 Msa1001780:intron 35.0%
CTAGTTTACAATGTTCGAGA+GGG - chr6_4:85669264-85669283 Msa1001780:intron 35.0%
TAGTTTACAATGTTCGAGAG+GGG - chr6_4:85669265-85669284 Msa1001780:intron 35.0%
GATTGTATCATTGTTGAGAG+TGG - chr6_4:85669489-85669508 Msa1001780:CDS 35.0%
TTGTATCATTGTTGAGAGTG+GGG - chr6_4:85669491-85669510 Msa1001780:CDS 35.0%
!! AAGAAGGTGCCATATATATG+TGG + chr6_4:85669543-85669562 None:intergenic 35.0%
CAAAGAGCTAACAAACAAGA+AGG + chr6_4:85669559-85669578 None:intergenic 35.0%
! CTTCTTGTTTGTTAGCTCTT+TGG - chr6_4:85669557-85669576 Msa1001780:intron 35.0%
GGTCATATCACATTCATTGT+GGG + chr6_4:85669677-85669696 None:intergenic 35.0%
!! CAAAACCGACTTGTATAGTA+AGG + chr6_4:85669729-85669748 None:intergenic 35.0%
!! TACTATACAAGTCGGTTTTG+TGG - chr6_4:85669729-85669748 Msa1001780:intron 35.0%
!! ACTATACAAGTCGGTTTTGT+GGG - chr6_4:85669730-85669749 Msa1001780:intron 35.0%
CCAACAGATTTGTATGGTAA+GGG + chr6_4:85669759-85669778 None:intergenic 35.0%
CCTTACCATACAAATCTGTT+GGG - chr6_4:85669757-85669776 Msa1001780:intron 35.0%
CCACCTATTATCAAACAACT+CGG - chr6_4:85669780-85669799 Msa1001780:intron 35.0%
! GATCCGAGTTGTTTGATAAT+AGG + chr6_4:85669786-85669805 None:intergenic 35.0%
TTTCAATATTGGACGTGAGA+AGG - chr6_4:85669817-85669836 Msa1001780:intron 35.0%
TTCAATATTGGACGTGAGAA+GGG - chr6_4:85669818-85669837 Msa1001780:intron 35.0%
ATATCTCTCATCTTACAAGC+CGG - chr6_4:85669899-85669918 Msa1001780:intron 35.0%
CTAATTCAACCTTCTAAACC+CGG + chr6_4:85669921-85669940 None:intergenic 35.0%
! TCAGTGCCAATATCCTATTT+TGG - chr6_4:85670025-85670044 Msa1001780:intron 35.0%
ATGGAGTGGTACAAAGATTT+AGG + chr6_4:85670099-85670118 None:intergenic 35.0%
! ATTTTGTTACATGGTGGTCA+TGG + chr6_4:85670173-85670192 None:intergenic 35.0%
!!! GTTGCTATTTTGTTACATGG+TGG + chr6_4:85670179-85670198 None:intergenic 35.0%
AATAAAATGAAGCCTGCAGT+AGG - chr6_4:85670220-85670239 Msa1001780:intron 35.0%
GCTGCATCACAAAAACAATA+AGG + chr6_4:85670380-85670399 None:intergenic 35.0%
TGCATACAAGAATGAGGTTA+GGG + chr6_4:85670548-85670567 None:intergenic 35.0%
ATGCATACAAGAATGAGGTT+AGG + chr6_4:85670549-85670568 None:intergenic 35.0%
AACAGTTACAATTACACCGT+TGG + chr6_4:85670590-85670609 None:intergenic 35.0%
AGAACCAGTAAAATTCCTGT+GGG + chr6_4:85670666-85670685 None:intergenic 35.0%
TAGAACCAGTAAAATTCCTG+TGG + chr6_4:85670667-85670686 None:intergenic 35.0%
ACTTTACTACACACTCGTTC+TGG + chr6_4:85663314-85663333 None:intergenic 40.0%
! AGTTGAAAGCATGGAACCAT+TGG - chr6_4:85663421-85663440 Msa1001780:three_prime_UTR 40.0%
! TTACTCTCTCTATTGGCCTA+AGG + chr6_4:85663552-85663571 None:intergenic 40.0%
! GCTATCTAGCTTATAAGGTG+AGG + chr6_4:85663950-85663969 None:intergenic 40.0%
GTGCTTGGACACATATCAAT+TGG - chr6_4:85663995-85664014 Msa1001780:intron 40.0%
ATTTGAACCGCAGTAATCAG+TGG - chr6_4:85664019-85664038 Msa1001780:intron 40.0%
! TTTCAAGCCACTGATTACTG+CGG + chr6_4:85664029-85664048 None:intergenic 40.0%
AGTAATCAGTGGCTTGAAAG+TGG - chr6_4:85664030-85664049 Msa1001780:intron 40.0%
GTAATCAGTGGCTTGAAAGT+GGG - chr6_4:85664031-85664050 Msa1001780:intron 40.0%
!!! GTGGTGCTATGATAGGATTT+TGG - chr6_4:85664132-85664151 Msa1001780:intron 40.0%
TACTAGTCGATGTGGGATTT+GGG + chr6_4:85664171-85664190 None:intergenic 40.0%
ATACTAGTCGATGTGGGATT+TGG + chr6_4:85664172-85664191 None:intergenic 40.0%
! AAATCCCACATCGACTAGTA+TGG - chr6_4:85664171-85664190 Msa1001780:intron 40.0%
! AATCCCACATCGACTAGTAT+GGG - chr6_4:85664172-85664191 Msa1001780:intron 40.0%
GGATAACTGGTCAATGACAT+AGG + chr6_4:85664338-85664357 None:intergenic 40.0%
! ATCTATGTTCAGAGCACTCT+TGG + chr6_4:85664419-85664438 None:intergenic 40.0%
TGGTACAGTCTTCACATATC+TGG + chr6_4:85664687-85664706 None:intergenic 40.0%
TCTCTACCTCAAGCTCAAAT+CGG + chr6_4:85664784-85664803 None:intergenic 40.0%
TTTGAGCTTGAGGTAGAGAT+TGG - chr6_4:85664785-85664804 Msa1001780:intron 40.0%
! TCCACCTCTTTCTGATAATG+AGG - chr6_4:85664814-85664833 Msa1001780:intron 40.0%
ACCTCATTATCAGAAAGAGG+TGG + chr6_4:85664818-85664837 None:intergenic 40.0%
AAACTAACAAGTCCAGGACT+AGG + chr6_4:85665466-85665485 None:intergenic 40.0%
GATTAGAGTTGAGAGATGAG+TGG - chr6_4:85665598-85665617 Msa1001780:intron 40.0%
! GTAGAGCATTTGCCAACATA+TGG - chr6_4:85665634-85665653 Msa1001780:intron 40.0%
AACTGTGTCAGACCATATGT+TGG + chr6_4:85665649-85665668 None:intergenic 40.0%
! TATGGTCTGACACAGTTTTC+GGG - chr6_4:85665652-85665671 Msa1001780:intron 40.0%
GGGTGGCCAATTTCAAAATT+GGG - chr6_4:85665850-85665869 Msa1001780:intron 40.0%
CTTAGCATAGGAGATCTGTA+TGG + chr6_4:85666191-85666210 None:intergenic 40.0%
!!! ACAAACGCCATTTTTGCATC+TGG - chr6_4:85666290-85666309 Msa1001780:CDS 40.0%
CTTCTCTCCAGATGCAAAAA+TGG + chr6_4:85666300-85666319 None:intergenic 40.0%
! CATTTTTGCATCTGGAGAGA+AGG - chr6_4:85666298-85666317 Msa1001780:CDS 40.0%
!! TGAGTGTTCCTTTTAGCTAC+AGG - chr6_4:85666347-85666366 Msa1001780:CDS 40.0%
!! TGTTCCTTTTAGCTACAGGT+CGG - chr6_4:85666351-85666370 Msa1001780:CDS 40.0%
AAACGATCCACTTGTTCATC+AGG - chr6_4:85666380-85666399 Msa1001780:intron 40.0%
AACGATCCACTTGTTCATCA+GGG - chr6_4:85666381-85666400 Msa1001780:intron 40.0%
! AAACTTGTTCCTCTTCCTTC+TGG + chr6_4:85666452-85666471 None:intergenic 40.0%
AACAAGTTTCAGTGTACTGC+TGG - chr6_4:85666463-85666482 Msa1001780:intron 40.0%
!! GCAATGATTACTCTGGAGTT+TGG + chr6_4:85666492-85666511 None:intergenic 40.0%
GTGACATGCAATGATTACTC+TGG + chr6_4:85666499-85666518 None:intergenic 40.0%
AATGCTTCCTGGACATTCTT+AGG - chr6_4:85666534-85666553 Msa1001780:intron 40.0%
GTCGCTCATAAGTAATACCA+AGG - chr6_4:85666661-85666680 Msa1001780:intron 40.0%
GCTCATAAGTAATACCAAGG+TGG - chr6_4:85666664-85666683 Msa1001780:intron 40.0%
GCTGCTAAGTGTGTATTTCT+TGG + chr6_4:85666917-85666936 None:intergenic 40.0%
GCATTCAGTGAGTGTCATAT+TGG - chr6_4:85667025-85667044 Msa1001780:intron 40.0%
TTTCCAGGTTACTACTCTTC+TGG + chr6_4:85667143-85667162 None:intergenic 40.0%
GGTTACCTGTGAAACCAAAA+AGG - chr6_4:85667184-85667203 Msa1001780:intron 40.0%
AGAACAGTACCCATTCTGTT+TGG - chr6_4:85667219-85667238 Msa1001780:intron 40.0%
GCAGGAACTATCCTATGAAT+CGG - chr6_4:85667377-85667396 Msa1001780:intron 40.0%
TTATCCCACTAAGTGGAGTT+GGG + chr6_4:85667566-85667585 None:intergenic 40.0%
TTTATCCCACTAAGTGGAGT+TGG + chr6_4:85667567-85667586 None:intergenic 40.0%
TTTCTTTCCTCATGTTGTGC+AGG - chr6_4:85667801-85667820 Msa1001780:intron 40.0%
TTGGAAAAGGAAGTTACCCT+AGG + chr6_4:85667918-85667937 None:intergenic 40.0%
TGTGTCAGTACTACTAATCG+AGG - chr6_4:85668178-85668197 Msa1001780:intron 40.0%
CCCTTCAAATGGGAAAAGAT+TGG - chr6_4:85668381-85668400 Msa1001780:intron 40.0%
!! TGTTGTGTAAGTCTGGTTCT+AGG + chr6_4:85668438-85668457 None:intergenic 40.0%
AACCAGACTTACACAACATC+TGG - chr6_4:85668440-85668459 Msa1001780:intron 40.0%
AACCAGATGTTGTGTAAGTC+TGG + chr6_4:85668445-85668464 None:intergenic 40.0%
AGATTCAGAATGATACCTGC+AGG + chr6_4:85668621-85668640 None:intergenic 40.0%
TGCAGGTATCATTCTGAATC+TGG - chr6_4:85668620-85668639 Msa1001780:intron 40.0%
GGTATCATTCTGAATCTGGT+TGG - chr6_4:85668624-85668643 Msa1001780:intron 40.0%
! TTATGGGCTTGAAGTTGATC+AGG - chr6_4:85668676-85668695 Msa1001780:intron 40.0%
TTGATGCATGCGTGAAACTT+TGG - chr6_4:85668738-85668757 Msa1001780:intron 40.0%
TGATGCATGCGTGAAACTTT+GGG - chr6_4:85668739-85668758 Msa1001780:intron 40.0%
ATCTCCCAAAACTGCTAAAG+CGG - chr6_4:85668966-85668985 Msa1001780:intron 40.0%
! CTATACCGCTTTAGCAGTTT+TGG + chr6_4:85668974-85668993 None:intergenic 40.0%
AGTTTACAATGTTCGAGAGG+GGG - chr6_4:85669266-85669285 Msa1001780:intron 40.0%
! TCTCTCATAGCCTTGAGATA+TGG - chr6_4:85669435-85669454 Msa1001780:CDS 40.0%
TCGGGTGTTCCACATATATA+TGG - chr6_4:85669531-85669550 Msa1001780:intron 40.0%
GGGTCATATCACATTCATTG+TGG + chr6_4:85669678-85669697 None:intergenic 40.0%
GCTTCCCTTACTATACAAGT+CGG - chr6_4:85669721-85669740 Msa1001780:intron 40.0%
CCCTTACCATACAAATCTGT+TGG - chr6_4:85669756-85669775 Msa1001780:intron 40.0%
CCCAACAGATTTGTATGGTA+AGG + chr6_4:85669760-85669779 None:intergenic 40.0%
! CCGAGTTGTTTGATAATAGG+TGG + chr6_4:85669783-85669802 None:intergenic 40.0%
TATCTCTCATCTTACAAGCC+GGG - chr6_4:85669900-85669919 Msa1001780:intron 40.0%
GTTGCCTCATAACCTAGTTT+AGG - chr6_4:85669940-85669959 Msa1001780:intron 40.0%
!! GATAATGGACCTAAGGTCAA+AGG + chr6_4:85670000-85670019 None:intergenic 40.0%
AACAGTCTCTACGCTTACAA+GGG + chr6_4:85670136-85670155 None:intergenic 40.0%
AAACAGTCTCTACGCTTACA+AGG + chr6_4:85670137-85670156 None:intergenic 40.0%
TTTATTGAGGCTTGGCACAA+TGG + chr6_4:85670206-85670225 None:intergenic 40.0%
! GGCTTCATTTTATTGAGGCT+TGG + chr6_4:85670214-85670233 None:intergenic 40.0%
! CTGCAGGCTTCATTTTATTG+AGG + chr6_4:85670219-85670238 None:intergenic 40.0%
!! TCACTTTTGGGGATAATCGT+GGG + chr6_4:85670416-85670435 None:intergenic 40.0%
!! ATCACTTTTGGGGATAATCG+TGG + chr6_4:85670417-85670436 None:intergenic 40.0%
CAATTTCATGTCTGGCAAAG+TGG - chr6_4:85670472-85670491 Msa1001780:intron 40.0%
! GTGGATTCAACTGTTTGCTA+CGG - chr6_4:85670491-85670510 Msa1001780:intron 40.0%
! TTTGCTACGGCTTTATCAAC+TGG - chr6_4:85670504-85670523 Msa1001780:intron 40.0%
! TTGCTACGGCTTTATCAACT+GGG - chr6_4:85670505-85670524 Msa1001780:intron 40.0%
!! ACTGGTTCTATAGTACAAGG+CGG - chr6_4:85670677-85670696 Msa1001780:intron 40.0%
!!! TGTTAGTACCCTTTTAGGGC+CGG - chr6_4:85663740-85663759 Msa1001780:CDS 45.0%
AGGAAGATGGCCAGTTAATG+AGG - chr6_4:85663896-85663915 Msa1001780:intron 45.0%
TTGAAAGTGGGTACCTATGG+AGG - chr6_4:85664043-85664062 Msa1001780:intron 45.0%
TGAAAGTGGGTACCTATGGA+GGG - chr6_4:85664044-85664063 Msa1001780:intron 45.0%
! CGTTTTACAATACAACCGCC+AGG - chr6_4:85664093-85664112 Msa1001780:intron 45.0%
CATCCCATACTAGTCGATGT+GGG + chr6_4:85664178-85664197 None:intergenic 45.0%
ATCGACTAGTATGGGATGCT+CGG - chr6_4:85664180-85664199 Msa1001780:intron 45.0%
TGGTGAGCTATCAGGATAAC+TGG + chr6_4:85664351-85664370 None:intergenic 45.0%
!! GCACTCTTGGTGTTATGCAT+AGG + chr6_4:85664406-85664425 None:intergenic 45.0%
TCTTCTCACGTCGAGCATTT+GGG + chr6_4:85664717-85664736 None:intergenic 45.0%
ATCTTCTCACGTCGAGCATT+TGG + chr6_4:85664718-85664737 None:intergenic 45.0%
!! GAAAAGCCGATTTGAGCTTG+AGG - chr6_4:85664775-85664794 Msa1001780:intron 45.0%
!! ATGAGGTTTGGTGGGAATTG+CGG - chr6_4:85664831-85664850 Msa1001780:intron 45.0%
AACACCTTGTGAACTGGTAG+AGG - chr6_4:85665418-85665437 Msa1001780:intron 45.0%
AAAGCCTCTACCAGTTCACA+AGG + chr6_4:85665425-85665444 None:intergenic 45.0%
TCACTCTATGTTGTCTGTCC+TGG - chr6_4:85665821-85665840 Msa1001780:intron 45.0%
ATGTTGTCTGTCCTGGATAG+CGG - chr6_4:85665828-85665847 Msa1001780:intron 45.0%
GGGGTGGCCAATTTCAAAAT+TGG - chr6_4:85665849-85665868 Msa1001780:intron 45.0%
AAAATTGGGATAGCAGGGTG+TGG - chr6_4:85665864-85665883 Msa1001780:intron 45.0%
AAATTGGGATAGCAGGGTGT+GGG - chr6_4:85665865-85665884 Msa1001780:intron 45.0%
AAACAAGGCCAAACTCCCTT+GGG - chr6_4:85666141-85666160 Msa1001780:intron 45.0%
!!! CTAGTGTTTTTTGCCCCCAA+GGG + chr6_4:85666159-85666178 None:intergenic 45.0%
!!! TCTAGTGTTTTTTGCCCCCA+AGG + chr6_4:85666160-85666179 None:intergenic 45.0%
TGGGGGCAAAAAACACTAGA+TGG - chr6_4:85666160-85666179 Msa1001780:intron 45.0%
AAGTCCGACCTGTAGCTAAA+AGG + chr6_4:85666358-85666377 None:intergenic 45.0%
AGAAAGCCCTGATGAACAAG+TGG + chr6_4:85666390-85666409 None:intergenic 45.0%
AAGCATTAGCTCATCCAGGA+CGG + chr6_4:85666521-85666540 None:intergenic 45.0%
CTCTGTTCCTAAGAATGTCC+AGG + chr6_4:85666544-85666563 None:intergenic 45.0%
! GTTACACGGCGATCTAAAGT+TGG + chr6_4:85666690-85666709 None:intergenic 45.0%
CACAGTTCCTCACAGTTACA+CGG + chr6_4:85666704-85666723 None:intergenic 45.0%
CGATGTGTAGATGAAGCGTA+AGG - chr6_4:85666863-85666882 Msa1001780:intron 45.0%
AGAGATTGAAACCTAGGGCT+AGG - chr6_4:85667406-85667425 Msa1001780:intron 45.0%
ACTAAGTGGAGTTGGGTACA+TGG + chr6_4:85667559-85667578 None:intergenic 45.0%
ATGTACCCAACTCCACTTAG+TGG - chr6_4:85667558-85667577 Msa1001780:intron 45.0%
TGTACCCAACTCCACTTAGT+GGG - chr6_4:85667559-85667578 Msa1001780:intron 45.0%
! CCAAGCTTTATCCCACTAAG+TGG + chr6_4:85667573-85667592 None:intergenic 45.0%
CCACTTAGTGGGATAAAGCT+TGG - chr6_4:85667570-85667589 Msa1001780:intron 45.0%
TTTAGGAGGCTGCCTTACTA+CGG - chr6_4:85667643-85667662 Msa1001780:intron 45.0%
CTTACTACGGCAGATGACTT+GGG - chr6_4:85667656-85667675 Msa1001780:intron 45.0%
AAAGCTACCTGCACAACATG+AGG + chr6_4:85667811-85667830 None:intergenic 45.0%
AAGTAGGCTACCCCTTCAAA+TGG - chr6_4:85668370-85668389 Msa1001780:intron 45.0%
AGTAGGCTACCCCTTCAAAT+GGG - chr6_4:85668371-85668390 Msa1001780:intron 45.0%
CCTCAATAATGTGGGAGACT+GGG + chr6_4:85669147-85669166 None:intergenic 45.0%
ACCTCAATAATGTGGGAGAC+TGG + chr6_4:85669148-85669167 None:intergenic 45.0%
!! CTAAATAGGCACCGAAGAAG+AGG - chr6_4:85669224-85669243 Msa1001780:intron 45.0%
CCGCAATTAAGGTGGTTAAG+GGG + chr6_4:85669350-85669369 None:intergenic 45.0%
CCCCTTAACCACCTTAATTG+CGG - chr6_4:85669347-85669366 Msa1001780:CDS 45.0%
GCCGCAATTAAGGTGGTTAA+GGG + chr6_4:85669351-85669370 None:intergenic 45.0%
TGCCGCAATTAAGGTGGTTA+AGG + chr6_4:85669352-85669371 None:intergenic 45.0%
CACCTTAATTGCGGCACATA+GGG - chr6_4:85669356-85669375 Msa1001780:CDS 45.0%
! GGTGTTGGATCCTACAATGA+AGG + chr6_4:85669385-85669404 None:intergenic 45.0%
AGGATCCAACACCATAGTGT+TGG - chr6_4:85669392-85669411 Msa1001780:CDS 45.0%
TACAGCCAACACTATGGTGT+TGG + chr6_4:85669400-85669419 None:intergenic 45.0%
!! CACCATAGTGTTGGCTGTAA+AGG - chr6_4:85669401-85669420 Msa1001780:CDS 45.0%
CTCCTTTACAGCCAACACTA+TGG + chr6_4:85669406-85669425 None:intergenic 45.0%
!! TAGTGTTGGCTGTAAAGGAG+TGG - chr6_4:85669406-85669425 Msa1001780:CDS 45.0%
!! AGTGTTGGCTGTAAAGGAGT+GGG - chr6_4:85669407-85669426 Msa1001780:CDS 45.0%
TATCATTGTTGAGAGTGGGG+AGG - chr6_4:85669494-85669513 Msa1001780:CDS 45.0%
! GGAGGTTTTCTCGGTTTCTT+CGG - chr6_4:85669512-85669531 Msa1001780:CDS 45.0%
! GAGGTTTTCTCGGTTTCTTC+GGG - chr6_4:85669513-85669532 Msa1001780:CDS 45.0%
AGGCGCACAAAAAACAATCG+CGG + chr6_4:85669589-85669608 None:intergenic 45.0%
ATTCACGACGAATGAGTGCA+AGG + chr6_4:85669609-85669628 None:intergenic 45.0%
TCTTACAAGCCGGGTTTAGA+AGG - chr6_4:85669909-85669928 Msa1001780:intron 45.0%
TGTGGCGTATAGTTATGGAG+TGG + chr6_4:85670113-85670132 None:intergenic 45.0%
! AAGGGTGTGGCGTATAGTTA+TGG + chr6_4:85670118-85670137 None:intergenic 45.0%
AAGCGTAGAGACTGTTTCCA+TGG - chr6_4:85670140-85670159 Msa1001780:intron 45.0%
! GTGGTCATGGATTATAGCCA+TGG + chr6_4:85670160-85670179 None:intergenic 45.0%
! CGAACCCACAGGAATTTTAC+TGG - chr6_4:85670659-85670678 Msa1001780:intron 45.0%
CTATAGTACAAGGCGGTTCA+AGG - chr6_4:85670684-85670703 Msa1001780:intron 45.0%
!! ATGGAGGGTGCTTCTTCATA+AGG - chr6_4:85670888-85670907 Msa1001780:CDS 45.0%
!! TGGAGGGTGCTTCTTCATAA+GGG - chr6_4:85670889-85670908 Msa1001780:CDS 45.0%
!! ACTCGTTCTGGTTCTGGTTG+TGG + chr6_4:85663302-85663321 None:intergenic 50.0%
!! CTACACACTCGTTCTGGTTC+TGG + chr6_4:85663308-85663327 None:intergenic 50.0%
TTGGCTGAGGAGCTTTGCTT+TGG - chr6_4:85663774-85663793 Msa1001780:CDS 50.0%
TGGCTGAGGAGCTTTGCTTT+GGG - chr6_4:85663775-85663794 Msa1001780:CDS 50.0%
!! TGAGGAGCTTTGCTTTGGGA+TGG - chr6_4:85663779-85663798 Msa1001780:CDS 50.0%
GGGAGAGTTCATTGAGTGCT+TGG - chr6_4:85663980-85663999 Msa1001780:intron 50.0%
GGCTTGAAAGTGGGTACCTA+TGG - chr6_4:85664040-85664059 Msa1001780:intron 50.0%
GAAAGTGGGTACCTATGGAG+GGG - chr6_4:85664045-85664064 Msa1001780:intron 50.0%
AAAGTGGGTACCTATGGAGG+GGG - chr6_4:85664046-85664065 Msa1001780:intron 50.0%
!! CTAAGGGGTGGTGCTATGAT+AGG - chr6_4:85664125-85664144 Msa1001780:intron 50.0%
GCATCCCATACTAGTCGATG+TGG + chr6_4:85664179-85664198 None:intergenic 50.0%
GAGCACTTTGGTGAGCTATC+AGG + chr6_4:85664359-85664378 None:intergenic 50.0%
GTTGAGAGATGAGTGGAGAC+TGG - chr6_4:85665605-85665624 Msa1001780:intron 50.0%
TGTTGTCTGTCCTGGATAGC+GGG - chr6_4:85665829-85665848 Msa1001780:intron 50.0%
CAAACAAGGCCAAACTCCCT+TGG - chr6_4:85666140-85666159 Msa1001780:intron 50.0%
AACAAGGCCAAACTCCCTTG+GGG - chr6_4:85666142-85666161 Msa1001780:intron 50.0%
! TTTTTGCCCCCAAGGGAGTT+TGG + chr6_4:85666152-85666171 None:intergenic 50.0%
ATCATTGCATGTCACCGTCC+TGG - chr6_4:85666504-85666523 Msa1001780:intron 50.0%
!! CAGGAAGCATTAGCTCATCC+AGG + chr6_4:85666525-85666544 None:intergenic 50.0%
CTGGATGAGCTAATGCTTCC+TGG - chr6_4:85666523-85666542 Msa1001780:intron 50.0%
! CGATCTAAAGTTGGCCACCT+TGG + chr6_4:85666681-85666700 None:intergenic 50.0%
TAGATCGCCGTGTAACTGTG+AGG - chr6_4:85666694-85666713 Msa1001780:intron 50.0%
ATGGTGTATCAAGTGCCACG+AGG - chr6_4:85666985-85667004 Msa1001780:intron 50.0%
CTACTCTTCTGGCGATGTTC+AGG + chr6_4:85667132-85667151 None:intergenic 50.0%
TCGCCAGAAGAGTAGTAACC+TGG - chr6_4:85667137-85667156 Msa1001780:intron 50.0%
! AAAAGTGTGGTCCTAGCCCT+AGG + chr6_4:85667420-85667439 None:intergenic 50.0%
CCAAGTCATCTGCCGTAGTA+AGG + chr6_4:85667658-85667677 None:intergenic 50.0%
CCTTACTACGGCAGATGACT+TGG - chr6_4:85667655-85667674 Msa1001780:intron 50.0%
AAAGAGTTAGCGGTAGAGGG+AGG - chr6_4:85668239-85668258 Msa1001780:intron 50.0%
ACGCATGCATCAACGATGAC+TGG + chr6_4:85668731-85668750 None:intergenic 50.0%
CCCAGTCTCCCACATTATTG+AGG - chr6_4:85669144-85669163 Msa1001780:intron 50.0%
ACAATGTTCGAGAGGGGGTA+CGG - chr6_4:85669271-85669290 Msa1001780:intron 50.0%
GAGGGACTTGTCCACTTGAT+TGG - chr6_4:85669319-85669338 Msa1001780:intron 50.0%
GGACTTGTCCACTTGATTGG+TGG - chr6_4:85669322-85669341 Msa1001780:intron 50.0%
CCTATGTGCCGCAATTAAGG+TGG + chr6_4:85669358-85669377 None:intergenic 50.0%
CCACCTTAATTGCGGCACAT+AGG - chr6_4:85669355-85669374 Msa1001780:CDS 50.0%
CTTAATTGCGGCACATAGGG+CGG - chr6_4:85669359-85669378 Msa1001780:CDS 50.0%
! TGAGAGTGGGGAGGTTTTCT+CGG - chr6_4:85669503-85669522 Msa1001780:CDS 50.0%
GGTGGCCCAACAGATTTGTA+TGG + chr6_4:85669765-85669784 None:intergenic 50.0%
TCTCTACGCTTACAAGGGTG+TGG + chr6_4:85670131-85670150 None:intergenic 50.0%
!! CTTTTGGGGATAATCGTGGG+AGG + chr6_4:85670413-85670432 None:intergenic 50.0%
GTTCCACGAGTTTCAGCTAC+TGG - chr6_4:85670607-85670626 Msa1001780:intron 50.0%
GAACCAGTAGCTGAAACTCG+TGG + chr6_4:85670613-85670632 None:intergenic 50.0%
AAATTCCTGTGGGTTCGCAC+AGG + chr6_4:85670656-85670675 None:intergenic 50.0%
!! GGAGGGTGCTTCTTCATAAG+GGG - chr6_4:85670890-85670909 Msa1001780:CDS 50.0%
TCTTGCTGCCGGCCCTAAAA+GGG + chr6_4:85663751-85663770 None:intergenic 55.0%
TCAGCCAAGTCTCTTGCTGC+CGG + chr6_4:85663762-85663781 None:intergenic 55.0%
AAGTGGGTACCTATGGAGGG+GGG - chr6_4:85664047-85664066 Msa1001780:intron 55.0%
CAATACAACCGCCAGGACGT+CGG - chr6_4:85664100-85664119 Msa1001780:intron 55.0%
GACTAGTATGGGATGCTCGG+TGG - chr6_4:85664183-85664202 Msa1001780:intron 55.0%
!! GGGAGGGTTCCAAAAGTGCT+TGG - chr6_4:85664251-85664270 Msa1001780:intron 55.0%
TCTCACGTCGAGCATTTGGG+CGG + chr6_4:85664714-85664733 None:intergenic 55.0%
GTTGTCTGTCCTGGATAGCG+GGG - chr6_4:85665830-85665849 Msa1001780:intron 55.0%
!! GGGAGTTTGGCCTTGTTTGC+AGG + chr6_4:85666139-85666158 None:intergenic 55.0%
ACAAGGCCAAACTCCCTTGG+GGG - chr6_4:85666143-85666162 Msa1001780:intron 55.0%
! CAGTGTGTCGTTGTTCCTCG+TGG + chr6_4:85667003-85667022 None:intergenic 55.0%
CACGAGGAACAACGACACAC+TGG - chr6_4:85667001-85667020 Msa1001780:intron 55.0%
TTGCATATTGGGACGCCTGC+AGG - chr6_4:85668603-85668622 Msa1001780:intron 55.0%
! CAATGTTCGAGAGGGGGTAC+GGG - chr6_4:85669272-85669291 Msa1001780:intron 55.0%
! AATGTTCGAGAGGGGGTACG+GGG - chr6_4:85669273-85669292 Msa1001780:intron 55.0%
!! AAGGGGCACCACCAATCAAG+TGG + chr6_4:85669333-85669352 None:intergenic 55.0%
CGCCCTATGTGCCGCAATTA+AGG + chr6_4:85669361-85669380 None:intergenic 55.0%
CATAGGGCGGCCTTCATTGT+AGG - chr6_4:85669372-85669391 Msa1001780:CDS 55.0%
TGAGGCTTGGCACAATGGCA+AGG + chr6_4:85670201-85670220 None:intergenic 55.0%
CTCTTGCTGCCGGCCCTAAA+AGG + chr6_4:85663752-85663771 None:intergenic 60.0%
GGCAGCAAGAGACTTGGCTG+AGG - chr6_4:85663761-85663780 Msa1001780:CDS 60.0%
TCGAGCATTTGGGCGGCAAG+TGG + chr6_4:85664707-85664726 None:intergenic 60.0%
AATTGGCCACCCCGCTATCC+AGG + chr6_4:85665842-85665861 None:intergenic 60.0%
AGGGCCGGCAGCAAGAGACT+TGG - chr6_4:85663755-85663774 Msa1001780:CDS 65.0%
ACCTATGGAGGGGGGCTGAC+TGG - chr6_4:85664055-85664074 Msa1001780:intron 65.0%
TCCAGTCAGCCCCCCTCCAT+AGG + chr6_4:85664059-85664078 None:intergenic 65.0%
TGGAGGGGGGCTGACTGGAA+AGG - chr6_4:85664060-85664079 Msa1001780:intron 65.0%
CCTTAGAGCCGACGTCCTGG+CGG + chr6_4:85664111-85664130 None:intergenic 65.0%
!! CGCCAGGACGTCGGCTCTAA+GGG - chr6_4:85664109-85664128 Msa1001780:intron 65.0%
!! GCCAGGACGTCGGCTCTAAG+GGG - chr6_4:85664110-85664129 Msa1001780:intron 65.0%
ACCCCTTAGAGCCGACGTCC+TGG + chr6_4:85664114-85664133 None:intergenic 65.0%
!! AGGACGTCGGCTCTAAGGGG+TGG - chr6_4:85664113-85664132 Msa1001780:intron 65.0%
!! GTCTGTCCTGGATAGCGGGG+TGG - chr6_4:85665833-85665852 Msa1001780:intron 65.0%
GCAGACCTGTGCGAACCCAC+AGG - chr6_4:85670648-85670667 Msa1001780:intron 65.0%
!! CCGCCAGGACGTCGGCTCTA+AGG - chr6_4:85664108-85664127 Msa1001780:intron 70.0%
Chromosome Type Strat End Strand Name
chr6_4 gene 85663275 85670926 85663275 ID=Msa1001780;Name=Msa1001780
chr6_4 mRNA 85663275 85670926 85663275 ID=Msa1001780-mRNA-1;Parent=Msa1001780;Name=Msa1001780-mRNA-1;_AED=0.07;_eAED=0.07;_QI=0|0.8|0.66|0.83|0.8|0.5|6|459|247
chr6_4 exon 85663275 85663802 85663275 ID=Msa1001780-mRNA-1:exon:16868;Parent=Msa1001780-mRNA-1
chr6_4 exon 85665441 85665576 85665441 ID=Msa1001780-mRNA-1:exon:16867;Parent=Msa1001780-mRNA-1
chr6_4 exon 85666281 85666378 85666281 ID=Msa1001780-mRNA-1:exon:16866;Parent=Msa1001780-mRNA-1
chr6_4 exon 85668488 85668602 85668488 ID=Msa1001780-mRNA-1:exon:16865;Parent=Msa1001780-mRNA-1
chr6_4 exon 85669340 85669532 85669340 ID=Msa1001780-mRNA-1:exon:16864;Parent=Msa1001780-mRNA-1
chr6_4 exon 85670794 85670926 85670794 ID=Msa1001780-mRNA-1:exon:16863;Parent=Msa1001780-mRNA-1
chr6_4 CDS 85670794 85670926 85670794 ID=Msa1001780-mRNA-1:cds;Parent=Msa1001780-mRNA-1
chr6_4 CDS 85669340 85669532 85669340 ID=Msa1001780-mRNA-1:cds;Parent=Msa1001780-mRNA-1
chr6_4 CDS 85668488 85668602 85668488 ID=Msa1001780-mRNA-1:cds;Parent=Msa1001780-mRNA-1
chr6_4 CDS 85666281 85666378 85666281 ID=Msa1001780-mRNA-1:cds;Parent=Msa1001780-mRNA-1
chr6_4 CDS 85665441 85665576 85665441 ID=Msa1001780-mRNA-1:cds;Parent=Msa1001780-mRNA-1
chr6_4 CDS 85663734 85663802 85663734 ID=Msa1001780-mRNA-1:cds;Parent=Msa1001780-mRNA-1
chr6_4 three_prime_UTR 85663275 85663733 85663275 ID=Msa1001780-mRNA-1:three_prime_utr;Parent=Msa1001780-mRNA-1
Gene Sequence

>Msa1001780

ATGGTTGTTGAGCAGCTTCAAGTTCCACAACCAGAACCAGAACGAGTGTGTAGTAAAGTTCAACAACCTCAACACAAAAAGCTGAATAAGAATAAGAAGAAGAATAAGAAAGAAAACAAAAGCAATAGACATGCAACTTTTTGCTTTGCCAGATATGTGAAGACTGTACCACTTGCCGCCCAAATGCTCGACGTGAGAAGATATCAAAAACTTCAAATGATTGAGGAATTAAAAACTGAGAAAAGCCGATTTGAGCTTGAGGTAGAGATTGGTAAATCTCCACCTCTTTCTGATAATGAGGTTTGGTGGGAATTGCGGAATAAAGCATTAGAGTTGAGAGATGAGTGGAGACTGGAGAATCGTAGAGCATTTGCCAACATATGGTCTGACACAGTTTTCGGGATCTCTTTATTTATTCTTTTGTACTTCAATAAGAGTAAAGTAGCTTTGCTCAAATTTACTGGTTATAAAATAATAAACAATATTTCTGATACTGGGAAGGCGTTTCTTATTATACTTATCACAGATATTTTCCTAGGGTATCATTCTGAATCTGGTTGGCAAACTCTGATAGAGATAATTGTCGAGCATTATGGGCTTGAAGTTGATCAGGCCGCCATTACTATTTTTGTTTGCTTTGTACCAGTCATCGTTGATGCATGCGTGAAACTTTGGCTGTTCAAATTCCTCCCACGATTATCCCCAAAAGTGATGAGTATATTTCAAGAAATGAAGCGTCACTAG

Protein sequence

>Msa1001780

MVVEQLQVPQPEPERVCSKVQQPQHKKLNKNKKKNKKENKSNRHATFCFARYVKTVPLAAQMLDVRRYQKLQMIEELKTEKSRFELEVEIGKSPPLSDNEVWWELRNKALELRDEWRLENRRAFANIWSDTVFGISLFILLYFNKSKVALLKFTGYKIINNISDTGKAFLIILITDIFLGYHSESGWQTLIEIIVEHYGLEVDQAAITIFVCFVPVIVDACVKLWLFKFLPRLSPKVMSIFQEMKRH*