Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0597340 | XP_013455381.1 | 78.896 | 308 | 30 | 3 | 1 | 307 | 1 | 274 | 4.99e-153 | 439 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0597340 | A0A072UIE0 | 78.896 | 308 | 30 | 3 | 1 | 307 | 1 | 274 | 2.39e-153 | 439 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001460 | Msa0597340 | 0.821001 | 5.091557e-53 | -8.615850e-47 |
| Msa0008850 | Msa0597340 | 0.829329 | 5.471165e-55 | -8.615850e-47 |
| Msa0012460 | Msa0597340 | 0.833242 | 5.968426e-56 | -8.615850e-47 |
| Msa0017120 | Msa0597340 | 0.844628 | 6.721953e-59 | -8.615850e-47 |
| Msa0017130 | Msa0597340 | 0.821477 | 3.953890e-53 | -8.615850e-47 |
| Msa0020630 | Msa0597340 | 0.852100 | 5.761806e-61 | -8.615850e-47 |
| Msa0027540 | Msa0597340 | 0.810696 | 1.013736e-50 | -8.615850e-47 |
| Msa0030730 | Msa0597340 | 0.825867 | 3.709586e-54 | -8.615850e-47 |
| Msa0037820 | Msa0597340 | 0.848822 | 4.797140e-60 | -8.615850e-47 |
| Msa0043680 | Msa0597340 | 0.803288 | 3.744605e-49 | -8.615850e-47 |
| Msa0046360 | Msa0597340 | 0.805240 | 1.468595e-49 | -8.615850e-47 |
| Msa0047470 | Msa0597340 | 0.846281 | 2.396836e-59 | -8.615850e-47 |
| Msa0048020 | Msa0597340 | 0.827914 | 1.202408e-54 | -8.615850e-47 |
| Msa0050720 | Msa0597340 | 0.808723 | 2.691830e-50 | -8.615850e-47 |
| Msa0050770 | Msa0597340 | 0.804843 | 1.777787e-49 | -8.615850e-47 |
| Msa0051600 | Msa0597340 | 0.803172 | 3.957221e-49 | -8.615850e-47 |
| Msa0061320 | Msa0597340 | 0.813169 | 2.932808e-51 | -8.615850e-47 |
| Msa0062750 | Msa0597340 | 0.804134 | 2.498718e-49 | -8.615850e-47 |
| Msa0065390 | Msa0597340 | 0.811429 | 7.031956e-51 | -8.615850e-47 |
| Msa0065690 | Msa0597340 | 0.843834 | 1.098064e-58 | -8.615850e-47 |
| Msa0068410 | Msa0597340 | 0.817259 | 3.619009e-52 | -8.615850e-47 |
| Msa0075310 | Msa0597340 | 0.807651 | 4.555467e-50 | -8.615850e-47 |
| Msa0078090 | Msa0597340 | 0.805242 | 1.467338e-49 | -8.615850e-47 |
| Msa0079250 | Msa0597340 | 0.817677 | 2.912257e-52 | -8.615850e-47 |
| Msa0082820 | Msa0597340 | 0.801565 | 8.478537e-49 | -8.615850e-47 |
| Msa0084680 | Msa0597340 | 0.861617 | 9.048911e-64 | -8.615850e-47 |
| Msa0089210 | Msa0597340 | 0.841660 | 4.152846e-58 | -8.615850e-47 |
| Msa0091480 | Msa0597340 | 0.824953 | 6.103551e-54 | -8.615850e-47 |
| Msa0091550 | Msa0597340 | 0.805191 | 1.503788e-49 | -8.615850e-47 |
| Msa0092660 | Msa0597340 | 0.819417 | 1.174477e-52 | -8.615850e-47 |
| Msa0092730 | Msa0597340 | 0.825424 | 4.722587e-54 | -8.615850e-47 |
| Msa0094670 | Msa0597340 | 0.801246 | 9.855083e-49 | -8.615850e-47 |
| Msa0101060 | Msa0597340 | 0.803625 | 3.188376e-49 | -8.615850e-47 |
| Msa0104420 | Msa0597340 | 0.801641 | 8.182866e-49 | -8.615850e-47 |
| Msa0105210 | Msa0597340 | 0.818145 | 2.284078e-52 | -8.615850e-47 |
| Msa0107460 | Msa0597340 | 0.806494 | 8.004980e-50 | -8.615850e-47 |
| Msa0110710 | Msa0597340 | 0.805632 | 1.215350e-49 | -8.615850e-47 |
| Msa0112290 | Msa0597340 | 0.805092 | 1.577650e-49 | -8.615850e-47 |
| Msa0114250 | Msa0597340 | 0.825719 | 4.021889e-54 | -8.615850e-47 |
| Msa0115010 | Msa0597340 | 0.815943 | 7.133928e-52 | -8.615850e-47 |
| Msa0123170 | Msa0597340 | 0.807933 | 3.968432e-50 | -8.615850e-47 |
| Msa0125440 | Msa0597340 | 0.833490 | 5.177506e-56 | -8.615850e-47 |
| Msa0125530 | Msa0597340 | 0.822627 | 2.141280e-53 | -8.615850e-47 |
| Msa0130800 | Msa0597340 | 0.854509 | 1.174058e-61 | -8.615850e-47 |
| Msa0135980 | Msa0597340 | 0.818779 | 1.640597e-52 | -8.615850e-47 |
| Msa0137600 | Msa0597340 | 0.819635 | 1.047459e-52 | -8.615850e-47 |
| Msa0141430 | Msa0597340 | 0.821669 | 3.571445e-53 | -8.615850e-47 |
| Msa0144340 | Msa0597340 | 0.827820 | 1.266336e-54 | -8.615850e-47 |
| Msa0146180 | Msa0597340 | 0.803410 | 3.532652e-49 | -8.615850e-47 |
| Msa0149500 | Msa0597340 | 0.816920 | 4.312419e-52 | -8.615850e-47 |
| Msa0152380 | Msa0597340 | 0.828453 | 8.915544e-55 | -8.615850e-47 |
| Msa0157020 | Msa0597340 | 0.831755 | 1.394453e-55 | -8.615850e-47 |
| Msa0157350 | Msa0597340 | 0.805689 | 1.182522e-49 | -8.615850e-47 |
| Msa0159750 | Msa0597340 | 0.854929 | 8.872911e-62 | -8.615850e-47 |
| Msa0162030 | Msa0597340 | 0.803458 | 3.452544e-49 | -8.615850e-47 |
| Msa0168100 | Msa0597340 | 0.809132 | 2.200905e-50 | -8.615850e-47 |
| Msa0171920 | Msa0597340 | 0.847938 | 8.421995e-60 | -8.615850e-47 |
| Msa0175280 | Msa0597340 | 0.801616 | 8.279802e-49 | -8.615850e-47 |
| Msa0176710 | Msa0597340 | 0.840204 | 1.000901e-57 | -8.615850e-47 |
| Msa0178940 | Msa0597340 | 0.841552 | 4.435487e-58 | -8.615850e-47 |
| Msa0181020 | Msa0597340 | 0.839716 | 1.341269e-57 | -8.615850e-47 |
| Msa0182640 | Msa0597340 | 0.803321 | 3.686168e-49 | -8.615850e-47 |
| Msa0185390 | Msa0597340 | 0.846726 | 1.812566e-59 | -8.615850e-47 |
| Msa0199740 | Msa0597340 | 0.814626 | 1.400086e-51 | -8.615850e-47 |
| Msa0206940 | Msa0597340 | 0.839961 | 1.158258e-57 | -8.615850e-47 |
| Msa0207000 | Msa0597340 | 0.808195 | 3.489766e-50 | -8.615850e-47 |
| Msa0213080 | Msa0597340 | 0.806647 | 7.432470e-50 | -8.615850e-47 |
| Msa0222070 | Msa0597340 | 0.815241 | 1.022662e-51 | -8.615850e-47 |
| Msa0222120 | Msa0597340 | 0.816356 | 5.767686e-52 | -8.615850e-47 |
| Msa0223280 | Msa0597340 | 0.820143 | 8.016579e-53 | -8.615850e-47 |
| Msa0224960 | Msa0597340 | 0.802416 | 5.667851e-49 | -8.615850e-47 |
| Msa0225010 | Msa0597340 | 0.811758 | 5.965110e-51 | -8.615850e-47 |
| Msa0226800 | Msa0597340 | 0.835670 | 1.465840e-56 | -8.615850e-47 |
| Msa0367490 | Msa0597340 | 0.813315 | 2.724224e-51 | -8.615850e-47 |
| Msa0369780 | Msa0597340 | 0.802369 | 5.795563e-49 | -8.615850e-47 |
| Msa0380430 | Msa0597340 | 0.813691 | 2.251812e-51 | -8.615850e-47 |
| Msa0382500 | Msa0597340 | 0.843333 | 1.494928e-58 | -8.615850e-47 |
| Msa0387260 | Msa0597340 | -0.808947 | 2.411258e-50 | -8.615850e-47 |
| Msa0387790 | Msa0597340 | 0.825286 | 5.092455e-54 | -8.615850e-47 |
| Msa0401340 | Msa0597340 | 0.807861 | 4.110351e-50 | -8.615850e-47 |
| Msa0411560 | Msa0597340 | 0.810570 | 1.079594e-50 | -8.615850e-47 |
| Msa0413740 | Msa0597340 | 0.816235 | 6.139374e-52 | -8.615850e-47 |
| Msa0417150 | Msa0597340 | 0.818868 | 1.566108e-52 | -8.615850e-47 |
| Msa0417630 | Msa0597340 | 0.820164 | 7.924499e-53 | -8.615850e-47 |
| Msa0421800 | Msa0597340 | 0.820992 | 5.115409e-53 | -8.615850e-47 |
| Msa0426480 | Msa0597340 | 0.801589 | 8.384854e-49 | -8.615850e-47 |
| Msa0427590 | Msa0597340 | 0.842743 | 2.146226e-58 | -8.615850e-47 |
| Msa0430020 | Msa0597340 | 0.807060 | 6.077760e-50 | -8.615850e-47 |
| Msa0431430 | Msa0597340 | 0.815354 | 9.652753e-52 | -8.615850e-47 |
| Msa0431520 | Msa0597340 | 0.826212 | 3.070388e-54 | -8.615850e-47 |
| Msa0431830 | Msa0597340 | 0.808303 | 3.309913e-50 | -8.615850e-47 |
| Msa0432680 | Msa0597340 | 0.843093 | 1.731493e-58 | -8.615850e-47 |
| Msa0448120 | Msa0597340 | 0.800143 | 1.655145e-48 | -8.615850e-47 |
| Msa0450460 | Msa0597340 | 0.804373 | 2.228383e-49 | -8.615850e-47 |
| Msa0467800 | Msa0597340 | 0.841845 | 3.711615e-58 | -8.615850e-47 |
| Msa0467880 | Msa0597340 | 0.838462 | 2.835111e-57 | -8.615850e-47 |
| Msa0479230 | Msa0597340 | 0.830378 | 3.037967e-55 | -8.615850e-47 |
| Msa0482680 | Msa0597340 | 0.823114 | 1.648656e-53 | -8.615850e-47 |
| Msa0239660 | Msa0597340 | 0.817768 | 2.778019e-52 | -8.615850e-47 |
| Msa0242290 | Msa0597340 | 0.817130 | 3.867382e-52 | -8.615850e-47 |
| Msa0250520 | Msa0597340 | 0.830504 | 2.829983e-55 | -8.615850e-47 |
| Msa0252180 | Msa0597340 | 0.815280 | 1.002174e-51 | -8.615850e-47 |
| Msa0257130 | Msa0597340 | 0.813586 | 2.374618e-51 | -8.615850e-47 |
| Msa0258380 | Msa0597340 | 0.802021 | 6.836028e-49 | -8.615850e-47 |
| Msa0259980 | Msa0597340 | 0.816826 | 4.525468e-52 | -8.615850e-47 |
| Msa0261250 | Msa0597340 | -0.805974 | 1.029936e-49 | -8.615850e-47 |
| Msa0263620 | Msa0597340 | 0.814392 | 1.576969e-51 | -8.615850e-47 |
| Msa0265580 | Msa0597340 | 0.813556 | 2.410671e-51 | -8.615850e-47 |
| Msa0277640 | Msa0597340 | 0.816394 | 5.656958e-52 | -8.615850e-47 |
| Msa0284780 | Msa0597340 | 0.810054 | 1.394691e-50 | -8.615850e-47 |
| Msa0288330 | Msa0597340 | 0.821972 | 3.038097e-53 | -8.615850e-47 |
| Msa0296000 | Msa0597340 | 0.853837 | 1.834495e-61 | -8.615850e-47 |
| Msa0296610 | Msa0597340 | 0.808104 | 3.649372e-50 | -8.615850e-47 |
| Msa0298970 | Msa0597340 | 0.817264 | 3.608350e-52 | -8.615850e-47 |
| Msa0303440 | Msa0597340 | 0.804531 | 2.065788e-49 | -8.615850e-47 |
| Msa0323630 | Msa0597340 | 0.801123 | 1.044292e-48 | -8.615850e-47 |
| Msa0323990 | Msa0597340 | 0.826515 | 2.600508e-54 | -8.615850e-47 |
| Msa0326670 | Msa0597340 | 0.808529 | 2.962218e-50 | -8.615850e-47 |
| Msa0333900 | Msa0597340 | 0.858192 | 9.752995e-63 | -8.615850e-47 |
| Msa0334020 | Msa0597340 | 0.859719 | 3.403581e-63 | -8.615850e-47 |
| Msa0334980 | Msa0597340 | 0.837898 | 3.961912e-57 | -8.615850e-47 |
| Msa0339860 | Msa0597340 | 0.812882 | 3.389259e-51 | -8.615850e-47 |
| Msa0340550 | Msa0597340 | 0.832364 | 9.863080e-56 | -8.615850e-47 |
| Msa0342620 | Msa0597340 | 0.804989 | 1.657653e-49 | -8.615850e-47 |
| Msa0350020 | Msa0597340 | 0.823370 | 1.436554e-53 | -8.615850e-47 |
| Msa0354390 | Msa0597340 | 0.803254 | 3.805610e-49 | -8.615850e-47 |
| Msa0485280 | Msa0597340 | 0.835861 | 1.310960e-56 | -8.615850e-47 |
| Msa0486530 | Msa0597340 | 0.811165 | 8.025334e-51 | -8.615850e-47 |
| Msa0490300 | Msa0597340 | 0.804056 | 2.594318e-49 | -8.615850e-47 |
| Msa0505390 | Msa0597340 | 0.809636 | 1.715516e-50 | -8.615850e-47 |
| Msa0509540 | Msa0597340 | 0.804586 | 2.011531e-49 | -8.615850e-47 |
| Msa0512310 | Msa0597340 | 0.816911 | 4.332020e-52 | -8.615850e-47 |
| Msa0514260 | Msa0597340 | 0.821816 | 3.301867e-53 | -8.615850e-47 |
| Msa0516450 | Msa0597340 | 0.801050 | 1.081212e-48 | -8.615850e-47 |
| Msa0518160 | Msa0597340 | 0.842386 | 2.668546e-58 | -8.615850e-47 |
| Msa0520320 | Msa0597340 | 0.811891 | 5.578996e-51 | -8.615850e-47 |
| Msa0524050 | Msa0597340 | 0.807143 | 5.836705e-50 | -8.615850e-47 |
| Msa0524120 | Msa0597340 | 0.808944 | 2.414253e-50 | -8.615850e-47 |
| Msa0530930 | Msa0597340 | 0.835879 | 1.297519e-56 | -8.615850e-47 |
| Msa0532840 | Msa0597340 | 0.821541 | 3.822977e-53 | -8.615850e-47 |
| Msa0533010 | Msa0597340 | 0.821783 | 3.361144e-53 | -8.615850e-47 |
| Msa0542040 | Msa0597340 | 0.805006 | 1.644089e-49 | -8.615850e-47 |
| Msa0546380 | Msa0597340 | 0.819086 | 1.396737e-52 | -8.615850e-47 |
| Msa0546740 | Msa0597340 | 0.838969 | 2.097192e-57 | -8.615850e-47 |
| Msa0553520 | Msa0597340 | 0.801322 | 9.508124e-49 | -8.615850e-47 |
| Msa0560200 | Msa0597340 | 0.829498 | 4.978405e-55 | -8.615850e-47 |
| Msa0567290 | Msa0597340 | 0.822045 | 2.922556e-53 | -8.615850e-47 |
| Msa0574170 | Msa0597340 | 0.833123 | 6.388624e-56 | -8.615850e-47 |
| Msa0576420 | Msa0597340 | 0.837764 | 4.288728e-57 | -8.615850e-47 |
| Msa0577230 | Msa0597340 | 0.807939 | 3.955741e-50 | -8.615850e-47 |
| Msa0583930 | Msa0597340 | 0.805160 | 1.526785e-49 | -8.615850e-47 |
| Msa0587900 | Msa0597340 | 0.823938 | 1.057752e-53 | -8.615850e-47 |
| Msa0589290 | Msa0597340 | 0.828790 | 7.389340e-55 | -8.615850e-47 |
| Msa0597340 | Msa0598250 | 0.820604 | 6.282481e-53 | -8.615850e-47 |
| Msa0597340 | Msa0600390 | 0.815058 | 1.123120e-51 | -8.615850e-47 |
| Msa0597340 | Msa0600820 | 0.809343 | 1.983151e-50 | -8.615850e-47 |
| Msa0597340 | Msa0604700 | 0.807110 | 5.930815e-50 | -8.615850e-47 |
| Msa0597340 | Msa0607280 | 0.841537 | 4.474501e-58 | -8.615850e-47 |
| Msa0597340 | Msa0607300 | 0.843447 | 1.393298e-58 | -8.615850e-47 |
| Msa0597340 | Msa0614230 | 0.807148 | 5.823568e-50 | -8.615850e-47 |
| Msa0597340 | Msa0619330 | 0.819039 | 1.431814e-52 | -8.615850e-47 |
| Msa0597340 | Msa0622390 | 0.804704 | 1.901174e-49 | -8.615850e-47 |
| Msa0597340 | Msa0623270 | 0.809229 | 2.098066e-50 | -8.615850e-47 |
| Msa0597340 | Msa0629500 | 0.817296 | 3.549922e-52 | -8.615850e-47 |
| Msa0597340 | Msa0640880 | 0.807159 | 5.792659e-50 | -8.615850e-47 |
| Msa0597340 | Msa0645820 | 0.812403 | 4.314898e-51 | -8.615850e-47 |
| Msa0597340 | Msa0647000 | 0.805459 | 1.321538e-49 | -8.615850e-47 |
| Msa0597340 | Msa0659040 | 0.844912 | 5.633249e-59 | -8.615850e-47 |
| Msa0597340 | Msa0667970 | 0.852910 | 3.385705e-61 | -8.615850e-47 |
| Msa0597340 | Msa0674220 | 0.801785 | 7.641609e-49 | -8.615850e-47 |
| Msa0597340 | Msa0681890 | 0.829447 | 5.122289e-55 | -8.615850e-47 |
| Msa0597340 | Msa0686610 | 0.800211 | 1.602949e-48 | -8.615850e-47 |
| Msa0597340 | Msa0690350 | 0.838249 | 3.216893e-57 | -8.615850e-47 |
| Msa0597340 | Msa0690720 | 0.804177 | 2.447779e-49 | -8.615850e-47 |
| Msa0597340 | Msa0691100 | 0.801010 | 1.101787e-48 | -8.615850e-47 |
| Msa0597340 | Msa0703720 | 0.802637 | 5.103219e-49 | -8.615850e-47 |
| Msa0597340 | Msa0703760 | 0.826867 | 2.143525e-54 | -8.615850e-47 |
| Msa0597340 | Msa0704220 | 0.814389 | 1.579535e-51 | -8.615850e-47 |
| Msa0597340 | Msa0704990 | 0.812273 | 4.605236e-51 | -8.615850e-47 |
| Msa0597340 | Msa0705030 | 0.805245 | 1.465020e-49 | -8.615850e-47 |
| Msa0597340 | Msa0707780 | 0.844577 | 6.934122e-59 | -8.615850e-47 |
| Msa0597340 | Msa0709080 | 0.825184 | 5.382697e-54 | -8.615850e-47 |
| Msa0597340 | Msa0709480 | 0.810594 | 1.066541e-50 | -8.615850e-47 |
| Msa0597340 | Msa0714600 | 0.822326 | 2.514870e-53 | -8.615850e-47 |
| Msa0597340 | Msa0720270 | 0.811019 | 8.630907e-51 | -8.615850e-47 |
| Msa0597340 | Msa0724050 | 0.801425 | 9.058436e-49 | -8.615850e-47 |
| Msa0597340 | Msa0726610 | 0.811406 | 7.113018e-51 | -8.615850e-47 |
| Msa0597340 | Msa0729550 | 0.814941 | 1.191909e-51 | -8.615850e-47 |
| Msa0597340 | Msa0730180 | 0.817886 | 2.613346e-52 | -8.615850e-47 |
| Msa0597340 | Msa0733000 | 0.816376 | 5.709485e-52 | -8.615850e-47 |
| Msa0597340 | Msa0763880 | 0.803929 | 2.756897e-49 | -8.615850e-47 |
| Msa0597340 | Msa0763910 | 0.804340 | 2.264584e-49 | -8.615850e-47 |
| Msa0597340 | Msa0769830 | 0.821696 | 3.519723e-53 | -8.615850e-47 |
| Msa0597340 | Msa0770430 | 0.853557 | 2.209470e-61 | -8.615850e-47 |
| Msa0597340 | Msa0780140 | 0.853231 | 2.740116e-61 | -8.615850e-47 |
| Msa0597340 | Msa0789800 | 0.857028 | 2.157015e-62 | -8.615850e-47 |
| Msa0597340 | Msa0790180 | 0.832601 | 8.612526e-56 | -8.615850e-47 |
| Msa0597340 | Msa0798950 | 0.803243 | 3.826386e-49 | -8.615850e-47 |
| Msa0597340 | Msa0802210 | 0.838109 | 3.495631e-57 | -8.615850e-47 |
| Msa0597340 | Msa0806720 | 0.826756 | 2.277732e-54 | -8.615850e-47 |
| Msa0597340 | Msa0806760 | 0.832725 | 8.023582e-56 | -8.615850e-47 |
| Msa0597340 | Msa0811510 | 0.827416 | 1.583356e-54 | -8.615850e-47 |
| Msa0597340 | Msa0824140 | 0.830900 | 2.262835e-55 | -8.615850e-47 |
| Msa0597340 | Msa0829570 | 0.803830 | 2.890999e-49 | -8.615850e-47 |
| Msa0597340 | Msa0830720 | 0.812390 | 4.343694e-51 | -8.615850e-47 |
| Msa0597340 | Msa0848360 | 0.831962 | 1.239446e-55 | -8.615850e-47 |
| Msa0597340 | Msa0848760 | 0.814457 | 1.525751e-51 | -8.615850e-47 |
| Msa0597340 | Msa0851740 | 0.839983 | 1.143386e-57 | -8.615850e-47 |
| Msa0597340 | Msa0863250 | 0.836860 | 7.305515e-57 | -8.615850e-47 |
| Msa0597340 | Msa0899700 | 0.828897 | 6.961528e-55 | -8.615850e-47 |
| Msa0597340 | Msa0909710 | 0.832464 | 9.311309e-56 | -8.615850e-47 |
| Msa0597340 | Msa0910400 | 0.804758 | 1.852278e-49 | -8.615850e-47 |
| Msa0597340 | Msa0925160 | 0.836519 | 8.923233e-57 | -8.615850e-47 |
| Msa0597340 | Msa0925730 | 0.820932 | 5.282179e-53 | -8.615850e-47 |
| Msa0597340 | Msa0934830 | 0.848611 | 5.488827e-60 | -8.615850e-47 |
| Msa0597340 | Msa0937940 | 0.806489 | 8.025383e-50 | -8.615850e-47 |
| Msa0597340 | Msa0945960 | 0.827839 | 1.253331e-54 | -8.615850e-47 |
| Msa0597340 | Msa0955260 | 0.837848 | 4.080269e-57 | -8.615850e-47 |
| Msa0597340 | Msa0958020 | 0.827394 | 1.603268e-54 | -8.615850e-47 |
| Msa0597340 | Msa0964680 | 0.828254 | 9.956704e-55 | -8.615850e-47 |
| Msa0597340 | Msa0966410 | 0.814944 | 1.190006e-51 | -8.615850e-47 |
| Msa0597340 | Msa0968780 | 0.807219 | 5.625524e-50 | -8.615850e-47 |
| Msa0597340 | Msa0970050 | 0.834191 | 3.456000e-56 | -8.615850e-47 |
| Msa0597340 | Msa0971860 | 0.845197 | 4.720150e-59 | -8.615850e-47 |
| Msa0597340 | Msa0972730 | 0.802177 | 6.348475e-49 | -8.615850e-47 |
| Msa0597340 | Msa0975080 | 0.835571 | 1.552705e-56 | -8.615850e-47 |
| Msa0597340 | Msa0981770 | 0.818281 | 2.127798e-52 | -8.615850e-47 |
| Msa0597340 | Msa0990520 | 0.823814 | 1.130824e-53 | -8.615850e-47 |
| Msa0597340 | Msa1000470 | 0.806653 | 7.409015e-50 | -8.615850e-47 |
| Msa0597340 | Msa1001780 | 0.827822 | 1.264978e-54 | -8.615850e-47 |
| Msa0597340 | Msa1014350 | 0.800736 | 1.253224e-48 | -8.615850e-47 |
| Msa0597340 | Msa1027790 | 0.805961 | 1.036494e-49 | -8.615850e-47 |
| Msa0597340 | Msa1030430 | 0.823597 | 1.271540e-53 | -8.615850e-47 |
| Msa0597340 | Msa1036250 | 0.816566 | 5.176912e-52 | -8.615850e-47 |
| Msa0597340 | Msa1038320 | 0.827479 | 1.529234e-54 | -8.615850e-47 |
| Msa0597340 | Msa1055360 | 0.805783 | 1.129941e-49 | -8.615850e-47 |
| Msa0597340 | Msa1061180 | 0.804262 | 2.350751e-49 | -8.615850e-47 |
| Msa0597340 | Msa1067430 | 0.826019 | 3.413294e-54 | -8.615850e-47 |
| Msa0597340 | Msa1072080 | 0.801224 | 9.961208e-49 | -8.615850e-47 |
| Msa0597340 | Msa1076520 | 0.810309 | 1.228812e-50 | -8.615850e-47 |
| Msa0597340 | Msa1080620 | 0.812397 | 4.326916e-51 | -8.615850e-47 |
| Msa0597340 | Msa1084490 | 0.807034 | 6.156899e-50 | -8.615850e-47 |
| Msa0597340 | Msa1093390 | 0.814276 | 1.672891e-51 | -8.615850e-47 |
| Msa0597340 | Msa1097380 | 0.804329 | 2.276209e-49 | -8.615850e-47 |
| Msa0597340 | Msa1105290 | 0.800340 | 1.508854e-48 | -8.615850e-47 |
| Msa0597340 | Msa1106560 | 0.803314 | 3.698935e-49 | -8.615850e-47 |
| Msa0597340 | Msa1112610 | 0.808676 | 2.754892e-50 | -8.615850e-47 |
| Msa0597340 | Msa1115580 | 0.833850 | 4.208433e-56 | -8.615850e-47 |
| Msa0597340 | Msa1119720 | 0.807691 | 4.467374e-50 | -8.615850e-47 |
| Msa0597340 | Msa1125780 | 0.809144 | 2.187273e-50 | -8.615850e-47 |
| Msa0597340 | Msa1125950 | 0.813985 | 1.940097e-51 | -8.615850e-47 |
| Msa0597340 | Msa1130650 | 0.839850 | 1.237897e-57 | -8.615850e-47 |
| Msa0597340 | Msa1130660 | 0.804212 | 2.407012e-49 | -8.615850e-47 |
| Msa0597340 | Msa1130730 | 0.825790 | 3.869084e-54 | -8.615850e-47 |
| Msa0597340 | Msa1131900 | 0.807632 | 4.597638e-50 | -8.615850e-47 |
| Msa0597340 | Msa1140010 | 0.802266 | 6.087813e-49 | -8.615850e-47 |
| Msa0597340 | Msa1142860 | -0.800052 | 1.727316e-48 | -8.615850e-47 |
| Msa0597340 | Msa1159100 | 0.821259 | 4.440622e-53 | -8.615850e-47 |
| Msa0597340 | Msa1164800 | -0.802457 | 5.560502e-49 | -8.615850e-47 |
| Msa0597340 | Msa1165810 | 0.817716 | 2.853940e-52 | -8.615850e-47 |
| Msa0597340 | Msa1166180 | 0.823558 | 1.298571e-53 | -8.615850e-47 |
| Msa0597340 | Msa1166280 | 0.823352 | 1.450324e-53 | -8.615850e-47 |
| Msa0597340 | Msa1166970 | 0.812133 | 4.941462e-51 | -8.615850e-47 |
| Msa0597340 | Msa1171340 | 0.816653 | 4.948536e-52 | -8.615850e-47 |
| Msa0597340 | Msa1177240 | 0.815903 | 7.283470e-52 | -8.615850e-47 |
| Msa0597340 | Msa1183390 | 0.816749 | 4.711032e-52 | -8.615850e-47 |
| Msa0597340 | Msa1190910 | 0.819899 | 9.115227e-53 | -8.615850e-47 |
| Msa0597340 | Msa1191390 | 0.801251 | 9.833746e-49 | -8.615850e-47 |
| Msa0597340 | Msa1197110 | 0.801564 | 8.484791e-49 | -8.615850e-47 |
| Msa0597340 | Msa1209790 | 0.819478 | 1.137240e-52 | -8.615850e-47 |
| Msa0597340 | Msa1209800 | 0.801773 | 7.684877e-49 | -8.615850e-47 |
| Msa0597340 | Msa1210640 | 0.817477 | 3.231404e-52 | -8.615850e-47 |
| Msa0597340 | Msa1214900 | 0.808108 | 3.641277e-50 | -8.615850e-47 |
| Msa0597340 | Msa1219780 | -0.811542 | 6.644364e-51 | -8.615850e-47 |
| Msa0597340 | Msa1222030 | -0.804510 | 2.087136e-49 | -8.615850e-47 |
| Msa0597340 | Msa1222390 | 0.810944 | 8.958497e-51 | -8.615850e-47 |
| Msa0597340 | Msa1222580 | 0.809954 | 1.465473e-50 | -8.615850e-47 |
| Msa0597340 | Msa1224670 | 0.835568 | 1.555813e-56 | -8.615850e-47 |
| Msa0597340 | Msa1226600 | 0.815270 | 1.007521e-51 | -8.615850e-47 |
| Msa0597340 | Msa1233770 | 0.819937 | 8.935344e-53 | -8.615850e-47 |
| Msa0597340 | Msa1238700 | 0.815928 | 7.189817e-52 | -8.615850e-47 |
| Msa0597340 | Msa1250670 | 0.805824 | 1.107712e-49 | -8.615850e-47 |
| Msa0597340 | Msa1259470 | 0.825405 | 4.771471e-54 | -8.615850e-47 |
| Msa0597340 | Msa1263030 | 0.825311 | 5.023278e-54 | -8.615850e-47 |
| Msa0597340 | Msa1264560 | 0.852956 | 3.283709e-61 | -8.615850e-47 |
| Msa0597340 | Msa1265960 | 0.802692 | 4.972764e-49 | -8.615850e-47 |
| Msa0597340 | Msa1276080 | 0.820432 | 6.880330e-53 | -8.615850e-47 |
| Msa0597340 | Msa1280120 | 0.832056 | 1.175423e-55 | -8.615850e-47 |
| Msa0597340 | Msa1293530 | 0.801797 | 7.600773e-49 | -8.615850e-47 |
| Msa0597340 | Msa1299160 | 0.818230 | 2.184407e-52 | -8.615850e-47 |
| Msa0597340 | Msa1306200 | 0.801822 | 7.511829e-49 | -8.615850e-47 |
| Msa0597340 | Msa1309100 | 0.817827 | 2.694536e-52 | -8.615850e-47 |
| Msa0597340 | Msa1309240 | 0.809152 | 2.179537e-50 | -8.615850e-47 |
| Msa0597340 | Msa1309360 | 0.804013 | 2.647706e-49 | -8.615850e-47 |
| Msa0597340 | Msa1317030 | 0.813080 | 3.066962e-51 | -8.615850e-47 |
| Msa0597340 | Msa1319580 | 0.806524 | 7.888657e-50 | -8.615850e-47 |
| Msa0597340 | Msa1322420 | 0.819997 | 8.656811e-53 | -8.615850e-47 |
| Msa0597340 | Msa1325650 | 0.807156 | 5.800972e-50 | -8.615850e-47 |
| Msa0597340 | Msa1325980 | 0.815912 | 7.250832e-52 | -8.615850e-47 |
| Msa0597340 | Msa1326000 | 0.823219 | 1.557987e-53 | -8.615850e-47 |
| Msa0597340 | Msa1335970 | -0.807938 | 3.958182e-50 | -8.615850e-47 |
| Msa0597340 | Msa1337090 | 0.802758 | 4.819577e-49 | -8.615850e-47 |
| Msa0597340 | Msa1367600 | 0.816011 | 6.889125e-52 | -8.615850e-47 |
| Msa0597340 | Msa1376350 | 0.816193 | 6.273273e-52 | -8.615850e-47 |
| Msa0597340 | Msa1376640 | 0.806319 | 8.712881e-50 | -8.615850e-47 |
| Msa0597340 | Msa1380720 | 0.847496 | 1.114433e-59 | -8.615850e-47 |
| Msa0597340 | Msa1381130 | 0.844869 | 5.786637e-59 | -8.615850e-47 |
| Msa0597340 | Msa1388850 | 0.801197 | 1.008782e-48 | -8.615850e-47 |
| Msa0597340 | Msa1394900 | 0.831048 | 2.081802e-55 | -8.615850e-47 |
| Msa0597340 | Msa1395690 | -0.800566 | 1.357030e-48 | -8.615850e-47 |
| Msa0597340 | Msa1405770 | 0.835923 | 1.264790e-56 | -8.615850e-47 |
| Msa0597340 | Msa1406230 | 0.814094 | 1.834965e-51 | -8.615850e-47 |
| Msa0597340 | Msa1406880 | 0.802934 | 4.432522e-49 | -8.615850e-47 |
| Msa0597340 | Msa1407710 | 0.823774 | 1.155582e-53 | -8.615850e-47 |
| Msa0597340 | Msa1410170 | 0.817088 | 3.953267e-52 | -8.615850e-47 |
| Msa0597340 | Msa1412080 | 0.831100 | 2.020986e-55 | -8.615850e-47 |
| Msa0597340 | Msa1412520 | 0.832656 | 8.346576e-56 | -8.615850e-47 |
| Msa0597340 | Msa1415250 | 0.814306 | 1.647887e-51 | -8.615850e-47 |
| Msa0597340 | Msa1418200 | 0.836964 | 6.873713e-57 | -8.615850e-47 |
| Msa0597340 | Msa1422500 | 0.845981 | 2.892564e-59 | -8.615850e-47 |
| Msa0597340 | Msa1423190 | 0.851856 | 6.756379e-61 | -8.615850e-47 |
| Msa0597340 | Msa1423230 | 0.809010 | 2.337571e-50 | -8.615850e-47 |
| Msa0597340 | Msa1423550 | 0.847869 | 8.801490e-60 | -8.615850e-47 |
| Msa0597340 | Msa1426290 | 0.805361 | 1.385395e-49 | -8.615850e-47 |
| Msa0597340 | Msa1430760 | 0.816055 | 6.734745e-52 | -8.615850e-47 |
| Msa0597340 | Msa1432640 | 0.816261 | 6.058237e-52 | -8.615850e-47 |
| Msa0597340 | Msa1435040 | 0.803738 | 3.020209e-49 | -8.615850e-47 |
| Msa0597340 | Msa1440180 | 0.848508 | 5.862489e-60 | -8.615850e-47 |
| Msa0597340 | Msa1440610 | 0.802226 | 6.202634e-49 | -8.615850e-47 |
| Msa0597340 | Msa1447230 | 0.820039 | 8.466961e-53 | -8.615850e-47 |
| Msa0597340 | Msa1449600 | 0.829753 | 4.314920e-55 | -8.615850e-47 |
| Msa0597340 | Msa1449740 | 0.847115 | 1.418384e-59 | -8.615850e-47 |
| Msa0597340 | Msa1449880 | 0.806910 | 6.538326e-50 | -8.615850e-47 |
| Msa0597340 | Msa1456830 | 0.802770 | 4.791037e-49 | -8.615850e-47 |
| Msa0597340 | Msa1458330 | 0.825044 | 5.809249e-54 | -8.615850e-47 |
| Msa0597340 | Msa1458920 | 0.818792 | 1.629248e-52 | -8.615850e-47 |
| Msa0597340 | Msa1460510 | 0.800667 | 1.294419e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0597340 | MtrunA17_Chr4g0018621 | 78.896 | 308 | 30 | 3 | 1 | 307 | 1 | 274 | 4.59e-157 | 439 |
| Msa0597340 | MtrunA17_Chr7g0232051 | 33.036 | 112 | 70 | 1 | 155 | 266 | 84 | 190 | 8.04e-15 | 72.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0597340 | AT4G25170.1 | 34.978 | 223 | 117 | 6 | 102 | 304 | 127 | 341 | 2.83e-30 | 117 |
| Msa0597340 | AT4G25170.2 | 35.849 | 212 | 108 | 6 | 113 | 304 | 153 | 356 | 1.46e-29 | 115 |
| Msa0597340 | AT5G61490.1 | 40.964 | 166 | 85 | 2 | 140 | 304 | 102 | 255 | 4.12e-29 | 112 |
Find 62 sgRNAs with CRISPR-Local
Find 161 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAACTATTGTTTAGCAAATT+TGG | 0.091915 | 4_2:-29332236 | Msa0597340:CDS |
| AAAGAGTTTAAAACAGAAAA+AGG | 0.187566 | 4_2:+29334113 | None:intergenic |
| CAGCATAAGTGCAGGGTGTT+AGG | 0.262984 | 4_2:-29332184 | Msa0597340:CDS |
| CTTCACGTGCCGAGCTCCTT+AGG | 0.274000 | 4_2:-29332156 | Msa0597340:CDS |
| TTTCTTGAACTTAATTTAGA+TGG | 0.293854 | 4_2:-29330777 | Msa0597340:three_prime_UTR |
| AAAACATTTGTTGTATTGTC+AGG | 0.320543 | 4_2:+29331199 | None:intergenic |
| TTCTTTCATGCTTTCGATCA+TGG | 0.323980 | 4_2:-29331029 | Msa0597340:CDS |
| CTCGATTACTTCGATGAGTT+TGG | 0.325783 | 4_2:+29331150 | None:intergenic |
| TGATAAAGATTTGCGTTTGC+AGG | 0.343518 | 4_2:+29334178 | None:intergenic |
| TATCAACCGATGAAGCTGTT+TGG | 0.376110 | 4_2:-29331623 | Msa0597340:CDS |
| ATCAACCGATGAAGCTGTTT+GGG | 0.379156 | 4_2:-29331622 | Msa0597340:CDS |
| GCAGACTGATCCCTCTGTTC+AGG | 0.380216 | 4_2:-29331975 | Msa0597340:intron |
| TGAGAAGAATAAGAAGATAA+TGG | 0.393458 | 4_2:+29334146 | None:intergenic |
| AATAAGAAGATAATGGAAAA+GGG | 0.394078 | 4_2:+29334153 | None:intergenic |
| GAATAAGAAGATAATGGAAA+AGG | 0.394823 | 4_2:+29334152 | None:intergenic |
| ACAGTAGCATAGATCACATT+TGG | 0.411777 | 4_2:+29330874 | None:intergenic |
| CCAGTAGTAGCAGTATTGTT+GGG | 0.418966 | 4_2:+29334077 | None:intergenic |
| AGCATAAGTGCAGGGTGTTA+GGG | 0.422717 | 4_2:-29332183 | Msa0597340:CDS |
| AATTATGTTGCGCCTAACTT+TGG | 0.436566 | 4_2:+29330978 | None:intergenic |
| AGGAGCTCGGCACGTGAAGC+AGG | 0.444376 | 4_2:+29332160 | None:intergenic |
| TATTCTCATCTTCAGAAACT+TGG | 0.451065 | 4_2:+29332089 | None:intergenic |
| CCGAAAATGCTACAGGATGA+TGG | 0.461296 | 4_2:-29332031 | Msa0597340:CDS |
| GGATTATATGGAAACAAAGA+TGG | 0.462920 | 4_2:+29332052 | None:intergenic |
| ATGAAGTTGTTCAGCAACTC+AGG | 0.463056 | 4_2:-29331584 | Msa0597340:CDS |
| TTCACGTGCCGAGCTCCTTA+GGG | 0.470566 | 4_2:-29332155 | Msa0597340:CDS |
| GAAATTGAGCTAGGCAGTCT+TGG | 0.472920 | 4_2:-29332112 | Msa0597340:CDS |
| CCCAACAATACTGCTACTAC+TGG | 0.480547 | 4_2:-29334077 | Msa0597340:CDS |
| GCCAGTAGTAGCAGTATTGT+TGG | 0.482902 | 4_2:+29334076 | None:intergenic |
| GGTGTTGCTGAACCCCTCAT+TGG | 0.487318 | 4_2:-29334032 | Msa0597340:CDS |
| ACCATTACAATGAAGCTTCG+CGG | 0.494281 | 4_2:-29334221 | None:intergenic |
| ATATAATCCGAAAATGCTAC+AGG | 0.513690 | 4_2:-29332038 | Msa0597340:CDS |
| GGTGCATCGTAACCAAAGTT+AGG | 0.522125 | 4_2:-29330990 | Msa0597340:exon |
| AAACATTTGTTGTATTGTCA+GGG | 0.524197 | 4_2:+29331200 | None:intergenic |
| CAGTAGTAGCAGTATTGTTG+GGG | 0.526955 | 4_2:+29334078 | None:intergenic |
| ATAAATCTCAGCATAAGTGC+AGG | 0.535395 | 4_2:-29332192 | Msa0597340:CDS |
| GTGCCGAGCTCCTTAGGGAC+AGG | 0.542730 | 4_2:-29332150 | Msa0597340:CDS |
| TGTTGAAATACCTGTCCCTA+AGG | 0.548759 | 4_2:+29332140 | None:intergenic |
| AGCCTCCCAAACAGCTTCAT+CGG | 0.552589 | 4_2:+29331617 | None:intergenic |
| TCCTCCTCCGTCTCAGACTG+AGG | 0.567103 | 4_2:-29334009 | Msa0597340:intron |
| ATAAGAAGATAATGGAAAAG+GGG | 0.572203 | 4_2:+29334154 | None:intergenic |
| CAGCAACACCATCATCATCA+TGG | 0.574045 | 4_2:+29334045 | None:intergenic |
| CTGAAGATGAGAATATAGAC+TGG | 0.575112 | 4_2:-29332081 | Msa0597340:CDS |
| AACAAACTAGAAATTGAGCT+AGG | 0.577265 | 4_2:-29332121 | Msa0597340:CDS |
| TGAAGTTGTTCAGCAACTCA+GGG | 0.586059 | 4_2:-29331583 | Msa0597340:CDS |
| GATCATGGTCTTGTTGATTG+TGG | 0.588306 | 4_2:-29331014 | Msa0597340:CDS |
| ATAGACTGCACCTGAACAGA+GGG | 0.590888 | 4_2:+29331965 | None:intergenic |
| ATACCTGTCCCTAAGGAGCT+CGG | 0.592229 | 4_2:+29332147 | None:intergenic |
| AGACGGAGGAGGACCAATGA+GGG | 0.595423 | 4_2:+29334019 | None:intergenic |
| TTTGCGTTTGCAGGTTCGTG+TGG | 0.604940 | 4_2:+29334187 | None:intergenic |
| ACCTCAGTCTGAGACGGAGG+AGG | 0.608000 | 4_2:+29334008 | None:intergenic |
| CATGGTCTTGTTGATTGTGG+TGG | 0.612289 | 4_2:-29331011 | Msa0597340:CDS |
| GAGACGGAGGAGGACCAATG+AGG | 0.625980 | 4_2:+29334018 | None:intergenic |
| TGAACCTCAGTCTGAGACGG+AGG | 0.631007 | 4_2:+29334005 | None:intergenic |
| TCATGAACCTCAGTCTGAGA+CGG | 0.633413 | 4_2:+29334002 | None:intergenic |
| GATGCTATCCATGATGATGA+TGG | 0.636543 | 4_2:-29334053 | Msa0597340:CDS |
| AACCGATGAAGCTGTTTGGG+AGG | 0.644231 | 4_2:-29331619 | Msa0597340:CDS |
| CATAGACTGCACCTGAACAG+AGG | 0.657496 | 4_2:+29331964 | None:intergenic |
| GACGGAGGAGGACCAATGAG+GGG | 0.671150 | 4_2:+29334020 | None:intergenic |
| TAAATCTCAGCATAAGTGCA+GGG | 0.673955 | 4_2:-29332191 | Msa0597340:CDS |
| AAGTTGTTCAGCAACTCAGG+GGG | 0.698699 | 4_2:-29331581 | Msa0597340:CDS |
| GAAGTTGTTCAGCAACTCAG+GGG | 0.702778 | 4_2:-29331582 | Msa0597340:CDS |
| AGTAGTAGCAGTATTGTTGG+GGG | 0.753787 | 4_2:+29334079 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTATAGATATTTGATAATTA+AGG | - | chr4_2:29333303-29333322 | Msa0597340:intron | 10.0% |
| !!! | TTTTATTGTTTAAGTGATAT+TGG | - | chr4_2:29331096-29331115 | Msa0597340:CDS | 15.0% |
| !! | AAACAATATGAGATTAATAT+AGG | + | chr4_2:29331703-29331722 | None:intergenic | 15.0% |
| !! | GAGTTAAAAAAAAATGATAT+AGG | - | chr4_2:29331728-29331747 | Msa0597340:intron | 15.0% |
| !! | TTAAAATTCATATAACAGTA+TGG | + | chr4_2:29332085-29332104 | None:intergenic | 15.0% |
| !! | AATTAAGAATTTGATTATGT+TGG | + | chr4_2:29332276-29332295 | None:intergenic | 15.0% |
| !!! | TTTTCGTTTTCTTTAATATT+TGG | - | chr4_2:29333447-29333466 | Msa0597340:intron | 15.0% |
| !!! | AAATTTTTTTATCACAATCT+TGG | + | chr4_2:29333862-29333881 | None:intergenic | 15.0% |
| !!! | AATAAGAAGATAATGGAAAA+GGG | + | chr4_2:29330829-29330848 | None:intergenic | 20.0% |
| !!! | AAAGAGTTTAAAACAGAAAA+AGG | + | chr4_2:29330869-29330888 | None:intergenic | 20.0% |
| !!! | CATACATAAGCTATTTTTAT+AGG | - | chr4_2:29331203-29331222 | Msa0597340:CDS | 20.0% |
| !!! | GATTTTTTTCGAATTATTAG+CGG | + | chr4_2:29331559-29331578 | None:intergenic | 20.0% |
| !!! | CATAATTATATTGGTAATGA+TGG | - | chr4_2:29331645-29331664 | Msa0597340:intron | 20.0% |
| !! | TGAGATTAATATAGGATATA+TGG | + | chr4_2:29331695-29331714 | None:intergenic | 20.0% |
| !! | ATTTGACTGATTAAAAACTA+TGG | - | chr4_2:29331757-29331776 | Msa0597340:intron | 20.0% |
| !!! | GTAGTATTTTGAATTCAATT+TGG | - | chr4_2:29331905-29331924 | Msa0597340:intron | 20.0% |
| !!! | ATTTTCATCTAAAATTTGCT+CGG | - | chr4_2:29332039-29332058 | Msa0597340:CDS | 20.0% |
| !!! | ATGTTTTCTCAAATTGTTAT+TGG | - | chr4_2:29332189-29332208 | Msa0597340:CDS | 20.0% |
| !! | AACTAGTAGTAAAAATTTAG+TGG | - | chr4_2:29332537-29332556 | Msa0597340:intron | 20.0% |
| !! | AAACTATTGTTTAGCAAATT+TGG | - | chr4_2:29332743-29332762 | Msa0597340:intron | 20.0% |
| !! | TATATTTGCATGATGTTATT+CGG | - | chr4_2:29333579-29333598 | Msa0597340:intron | 20.0% |
| !!! | ATACAACAAATGTTTTGATT+TGG | - | chr4_2:29333787-29333806 | Msa0597340:intron | 20.0% |
| !!! | TACATTACAACACAATTTTT+TGG | - | chr4_2:29334028-29334047 | Msa0597340:CDS | 20.0% |
| !! | TTTCTTGAACTTAATTTAGA+TGG | - | chr4_2:29334202-29334221 | Msa0597340:CDS | 20.0% |
| !!! | ATAAGAAGATAATGGAAAAG+GGG | + | chr4_2:29330828-29330847 | None:intergenic | 25.0% |
| !!! | GAATAAGAAGATAATGGAAA+AGG | + | chr4_2:29330830-29330849 | None:intergenic | 25.0% |
| ! | TGAGAAGAATAAGAAGATAA+TGG | + | chr4_2:29330836-29330855 | None:intergenic | 25.0% |
| ! | CTTCAACGGTAAAAATATAT+TGG | - | chr4_2:29331013-29331032 | Msa0597340:CDS | 25.0% |
| !! | TTAAGTGATATTGGTAATCA+TGG | - | chr4_2:29331105-29331124 | Msa0597340:CDS | 25.0% |
| !! | ATATTGGTAATCATGGTATA+AGG | - | chr4_2:29331112-29331131 | Msa0597340:CDS | 25.0% |
| !!! | CATAAGCTATTTTTATAGGA+AGG | - | chr4_2:29331207-29331226 | Msa0597340:CDS | 25.0% |
| ! | AAAATAAGCTGAAGCTATAT+TGG | - | chr4_2:29331299-29331318 | Msa0597340:intron | 25.0% |
| !!! | CTTCTAAAACCCTTATATTA+AGG | - | chr4_2:29331470-29331489 | Msa0597340:intron | 25.0% |
| ! | ACCAATATAATTATGAAGCA+CGG | + | chr4_2:29331640-29331659 | None:intergenic | 25.0% |
| ! | TGAATTCAATTTGGCAAATT+TGG | - | chr4_2:29331914-29331933 | Msa0597340:intron | 25.0% |
| ! | AAACACAACACAAATTAAGA+CGG | + | chr4_2:29331981-29332000 | None:intergenic | 25.0% |
| !!! | TGTGTTTCATAGATTTTAAC+TGG | - | chr4_2:29332249-29332268 | Msa0597340:CDS | 25.0% |
| ! | TGATACATTCTTATATGTCA+TGG | - | chr4_2:29332343-29332362 | Msa0597340:intron | 25.0% |
| !! | AAGTTCTATGAAATTTTGCA+TGG | + | chr4_2:29332655-29332674 | None:intergenic | 25.0% |
| !!! | AACAATTTGCTGAAGTTTTT+CGG | - | chr4_2:29333190-29333209 | Msa0597340:intron | 25.0% |
| ! | ATATAACAATAGCTGCTATT+CGG | + | chr4_2:29333239-29333258 | None:intergenic | 25.0% |
| ! | AAAGAGATAATTTAACCATG+AGG | - | chr4_2:29333262-29333281 | Msa0597340:intron | 25.0% |
| ! | ATATTTGCATGATGTTATTC+GGG | - | chr4_2:29333580-29333599 | Msa0597340:intron | 25.0% |
| ! | GAGTACATAGATTAGATTTA+TGG | - | chr4_2:29333615-29333634 | Msa0597340:intron | 25.0% |
| ! | ATTATAGAATTATGACCTAC+TGG | - | chr4_2:29333670-29333689 | Msa0597340:intron | 25.0% |
| !!! | AAACATTTGTTGTATTGTCA+GGG | + | chr4_2:29333782-29333801 | None:intergenic | 25.0% |
| !!! | AAAACATTTGTTGTATTGTC+AGG | + | chr4_2:29333783-29333802 | None:intergenic | 25.0% |
| !!! | AACACAATTTTTTGGACTTT+TGG | - | chr4_2:29334036-29334055 | Msa0597340:CDS | 25.0% |
| !!! | ACACAATTTTTTGGACTTTT+GGG | - | chr4_2:29334037-29334056 | Msa0597340:CDS | 25.0% |
| CAACTGCAACCTTAATATAA+GGG | + | chr4_2:29331482-29331501 | None:intergenic | 30.0% | |
| ACAACTGCAACCTTAATATA+AGG | + | chr4_2:29331483-29331502 | None:intergenic | 30.0% | |
| TTATATTAAGGTTGCAGTTG+TGG | - | chr4_2:29331482-29331501 | Msa0597340:intron | 30.0% | |
| TCCGTGCTTCATAATTATAT+TGG | - | chr4_2:29331636-29331655 | Msa0597340:CDS | 30.0% | |
| GACTGATTAAAAACTATGGA+TGG | - | chr4_2:29331761-29331780 | Msa0597340:intron | 30.0% | |
| ! | TGAATTTGATTAGCTGATGT+TGG | - | chr4_2:29331820-29331839 | Msa0597340:intron | 30.0% |
| ! | TTAGCTGATGTTGGAATTTT+AGG | - | chr4_2:29331829-29331848 | Msa0597340:intron | 30.0% |
| AACAAACTAGAAATTGAGCT+AGG | - | chr4_2:29332858-29332877 | Msa0597340:intron | 30.0% | |
| TATTCTCATCTTCAGAAACT+TGG | + | chr4_2:29332893-29332912 | None:intergenic | 30.0% | |
| GGATTATATGGAAACAAAGA+TGG | + | chr4_2:29332930-29332949 | None:intergenic | 30.0% | |
| ! | TGTAGCATTTTCGGATTATA+TGG | + | chr4_2:29332942-29332961 | None:intergenic | 30.0% |
| ATATAATCCGAAAATGCTAC+AGG | - | chr4_2:29332941-29332960 | Msa0597340:intron | 30.0% | |
| !!! | ACAATTTGCTGAAGTTTTTC+GGG | - | chr4_2:29333191-29333210 | Msa0597340:intron | 30.0% |
| TATTTGCATGATGTTATTCG+GGG | - | chr4_2:29333581-29333600 | Msa0597340:intron | 30.0% | |
| TGATAAAGATTTGCGTTTGC+AGG | + | chr4_2:29330804-29330823 | None:intergenic | 35.0% | |
| !! | TCATGGTATAAGGCTTTGTT+TGG | - | chr4_2:29331122-29331141 | Msa0597340:CDS | 35.0% |
| TAAGTTGTGTGAGACTGTTT+AGG | + | chr4_2:29331390-29331409 | None:intergenic | 35.0% | |
| !!! | GGTTTTAGAAGTCTCAAAAG+CGG | + | chr4_2:29331461-29331480 | None:intergenic | 35.0% |
| TTGTGGTTGTTTATGAAGCA+CGG | - | chr4_2:29331499-29331518 | Msa0597340:intron | 35.0% | |
| TTGTTTATGAAGCACGGATA+CGG | - | chr4_2:29331505-29331524 | Msa0597340:intron | 35.0% | |
| !! | GTAATTATAAGTGTCGACAC+CGG | - | chr4_2:29331591-29331610 | Msa0597340:CDS | 35.0% |
| !! | TAATTATAAGTGTCGACACC+GGG | - | chr4_2:29331592-29331611 | Msa0597340:CDS | 35.0% |
| ACAGACACTTAACACTGAAT+AGG | + | chr4_2:29332232-29332251 | None:intergenic | 35.0% | |
| GATCTCTAATTCTGAATTCC+TGG | + | chr4_2:29332485-29332504 | None:intergenic | 35.0% | |
| CCATACCTCATTAGTCATTA+CGG | - | chr4_2:29332584-29332603 | Msa0597340:intron | 35.0% | |
| AATGACCGTAATGACTAATG+AGG | + | chr4_2:29332592-29332611 | None:intergenic | 35.0% | |
| CATTAGTCATTACGGTCATT+AGG | - | chr4_2:29332592-29332611 | Msa0597340:intron | 35.0% | |
| ATAAATCTCAGCATAAGTGC+AGG | - | chr4_2:29332787-29332806 | Msa0597340:intron | 35.0% | |
| TAAATCTCAGCATAAGTGCA+GGG | - | chr4_2:29332788-29332807 | Msa0597340:intron | 35.0% | |
| CTGAAGATGAGAATATAGAC+TGG | - | chr4_2:29332898-29332917 | Msa0597340:intron | 35.0% | |
| ! | ATTTGAGATGCACTTCATAC+TGG | - | chr4_2:29333117-29333136 | Msa0597340:intron | 35.0% |
| !! | TCGATAGCTTTGTTAATGTG+TGG | - | chr4_2:29333478-29333497 | Msa0597340:intron | 35.0% |
| TTCTTTCATGCTTTCGATCA+TGG | - | chr4_2:29333950-29333969 | Msa0597340:intron | 35.0% | |
| AATTATGTTGCGCCTAACTT+TGG | + | chr4_2:29334004-29334023 | None:intergenic | 35.0% | |
| !!! | TTTTTGGACTTTTGGGTTAG+AGG | - | chr4_2:29334044-29334063 | Msa0597340:CDS | 35.0% |
| ACAGTAGCATAGATCACATT+TGG | + | chr4_2:29334108-29334127 | None:intergenic | 35.0% | |
| AGTAGTAGCAGTATTGTTGG+GGG | + | chr4_2:29330903-29330922 | None:intergenic | 40.0% | |
| CAGTAGTAGCAGTATTGTTG+GGG | + | chr4_2:29330904-29330923 | None:intergenic | 40.0% | |
| CCAGTAGTAGCAGTATTGTT+GGG | + | chr4_2:29330905-29330924 | None:intergenic | 40.0% | |
| ! | GATGCTATCCATGATGATGA+TGG | - | chr4_2:29330926-29330945 | Msa0597340:three_prime_UTR | 40.0% |
| ATGCTCTCTCTTCTCTTCAA+CGG | - | chr4_2:29330999-29331018 | Msa0597340:CDS | 40.0% | |
| CTCACACAACTTATGTCAGT+AGG | - | chr4_2:29331397-29331416 | Msa0597340:intron | 40.0% | |
| GCACTGAAATGCTTGCAAAA+TGG | + | chr4_2:29332390-29332409 | None:intergenic | 40.0% | |
| AGCATTTCAGTGCCTAATCA+TGG | - | chr4_2:29332397-29332416 | Msa0597340:intron | 40.0% | |
| ! | CATGTGGTGCATAAGACTTT+TGG | + | chr4_2:29332449-29332468 | None:intergenic | 40.0% |
| CCGTAATGACTAATGAGGTA+TGG | + | chr4_2:29332587-29332606 | None:intergenic | 40.0% | |
| TGTTGAAATACCTGTCCCTA+AGG | + | chr4_2:29332842-29332861 | None:intergenic | 40.0% | |
| ! | CCATCATCCTGTAGCATTTT+CGG | + | chr4_2:29332951-29332970 | None:intergenic | 40.0% |
| CTGAAATCAGTAAAGCCTCA+TGG | + | chr4_2:29333280-29333299 | None:intergenic | 40.0% | |
| TATCAACCGATGAAGCTGTT+TGG | - | chr4_2:29333356-29333375 | Msa0597340:intron | 40.0% | |
| ATCAACCGATGAAGCTGTTT+GGG | - | chr4_2:29333357-29333376 | Msa0597340:intron | 40.0% | |
| ATGAAGTTGTTCAGCAACTC+AGG | - | chr4_2:29333395-29333414 | Msa0597340:intron | 40.0% | |
| TGAAGTTGTTCAGCAACTCA+GGG | - | chr4_2:29333396-29333415 | Msa0597340:intron | 40.0% | |
| ! | AATTATGACCTACTGGCTGA+TGG | - | chr4_2:29333677-29333696 | Msa0597340:intron | 40.0% |
| ! | ATTATGACCTACTGGCTGAT+GGG | - | chr4_2:29333678-29333697 | Msa0597340:intron | 40.0% |
| GATGGGCATAAACACTAATC+TGG | - | chr4_2:29333695-29333714 | Msa0597340:intron | 40.0% | |
| CTCGATTACTTCGATGAGTT+TGG | + | chr4_2:29333832-29333851 | None:intergenic | 40.0% | |
| !! | GATCATGGTCTTGTTGATTG+TGG | - | chr4_2:29333965-29333984 | Msa0597340:intron | 40.0% |
| CCCAACAATACTGCTACTAC+TGG | - | chr4_2:29330902-29330921 | Msa0597340:three_prime_UTR | 45.0% | |
| GCCAGTAGTAGCAGTATTGT+TGG | + | chr4_2:29330906-29330925 | None:intergenic | 45.0% | |
| CAGCAACACCATCATCATCA+TGG | + | chr4_2:29330937-29330956 | None:intergenic | 45.0% | |
| TCATGAACCTCAGTCTGAGA+CGG | + | chr4_2:29330980-29330999 | None:intergenic | 45.0% | |
| AACTGTGGGTCTGTTTGGAT+TGG | + | chr4_2:29331437-29331456 | None:intergenic | 45.0% | |
| TATGAAGCACGGACACTCTT+CGG | + | chr4_2:29331629-29331648 | None:intergenic | 45.0% | |
| ! | CTGAAGTGTCAGAGCTACAT+AGG | + | chr4_2:29332108-29332127 | None:intergenic | 45.0% |
| !! | CTATGTAGCTCTGACACTTC+AGG | - | chr4_2:29332106-29332125 | Msa0597340:CDS | 45.0% |
| ! | ACAAAGTGTCAGTGTTGCGT+TGG | + | chr4_2:29332152-29332171 | None:intergenic | 45.0% |
| AACGCAACACTGACACTTTG+TGG | - | chr4_2:29332151-29332170 | Msa0597340:CDS | 45.0% | |
| AACTCAACGACGCCATGATT+AGG | + | chr4_2:29332412-29332431 | None:intergenic | 45.0% | |
| TGGTAGCTAAGCTCATCATG+TGG | + | chr4_2:29332465-29332484 | None:intergenic | 45.0% | |
| ACATGATGAGCTTAGCTACC+AGG | - | chr4_2:29332464-29332483 | Msa0597340:intron | 45.0% | |
| ! | AGCATAAGTGCAGGGTGTTA+GGG | - | chr4_2:29332796-29332815 | Msa0597340:intron | 45.0% |
| GAAATTGAGCTAGGCAGTCT+TGG | - | chr4_2:29332867-29332886 | Msa0597340:intron | 45.0% | |
| CCGAAAATGCTACAGGATGA+TGG | - | chr4_2:29332948-29332967 | Msa0597340:intron | 45.0% | |
| ATAGACTGCACCTGAACAGA+GGG | + | chr4_2:29333017-29333036 | None:intergenic | 45.0% | |
| AGCTATAGCGCTATGCATAG+CGG | - | chr4_2:29333161-29333180 | Msa0597340:intron | 45.0% | |
| GAAGTTGTTCAGCAACTCAG+GGG | - | chr4_2:29333397-29333416 | Msa0597340:intron | 45.0% | |
| AAGTTGTTCAGCAACTCAGG+GGG | - | chr4_2:29333398-29333417 | Msa0597340:intron | 45.0% | |
| TCTCACGCTCTCTGAATTAG+TGG | - | chr4_2:29333506-29333525 | Msa0597340:intron | 45.0% | |
| GCTCTCTGAATTAGTGGTGA+GGG | - | chr4_2:29333512-29333531 | Msa0597340:intron | 45.0% | |
| TGCATGATGTTATTCGGGGA+AGG | - | chr4_2:29333585-29333604 | Msa0597340:intron | 45.0% | |
| !! | CATGGTCTTGTTGATTGTGG+TGG | - | chr4_2:29333968-29333987 | Msa0597340:intron | 45.0% |
| GGTGCATCGTAACCAAAGTT+AGG | - | chr4_2:29333989-29334008 | Msa0597340:intron | 45.0% | |
| TTTGCGTTTGCAGGTTCGTG+TGG | + | chr4_2:29330795-29330814 | None:intergenic | 50.0% | |
| GTCTCAAAAGCGGCAACTGT+GGG | + | chr4_2:29331451-29331470 | None:intergenic | 50.0% | |
| AGTCTCAAAAGCGGCAACTG+TGG | + | chr4_2:29331452-29331471 | None:intergenic | 50.0% | |
| ! | CAGCATAAGTGCAGGGTGTT+AGG | - | chr4_2:29332795-29332814 | Msa0597340:intron | 50.0% |
| ATACCTGTCCCTAAGGAGCT+CGG | + | chr4_2:29332835-29332854 | None:intergenic | 50.0% | |
| CATAGACTGCACCTGAACAG+AGG | + | chr4_2:29333018-29333037 | None:intergenic | 50.0% | |
| CTCTGTTCAGGTGCAGTCTA+TGG | - | chr4_2:29333016-29333035 | Msa0597340:intron | 50.0% | |
| AACCGATGAAGCTGTTTGGG+AGG | - | chr4_2:29333360-29333379 | Msa0597340:intron | 50.0% | |
| AGCCTCCCAAACAGCTTCAT+CGG | + | chr4_2:29333365-29333384 | None:intergenic | 50.0% | |
| CGCTCTCTGAATTAGTGGTG+AGG | - | chr4_2:29333511-29333530 | Msa0597340:intron | 50.0% | |
| GTTTATGCCCATCAGCCAGT+AGG | + | chr4_2:29333688-29333707 | None:intergenic | 50.0% | |
| !! | GGTGTTGCTGAACCCCTCAT+TGG | - | chr4_2:29330947-29330966 | Msa0597340:three_prime_UTR | 55.0% |
| AGACGGAGGAGGACCAATGA+GGG | + | chr4_2:29330963-29330982 | None:intergenic | 55.0% | |
| ! | TGAACCTCAGTCTGAGACGG+AGG | + | chr4_2:29330977-29330996 | None:intergenic | 55.0% |
| ! | TCTTCGGATTAGGCGTGTCC+CGG | + | chr4_2:29331613-29331632 | None:intergenic | 55.0% |
| GCACGGACACTCTTCGGATT+AGG | + | chr4_2:29331623-29331642 | None:intergenic | 55.0% | |
| TTCACGTGCCGAGCTCCTTA+GGG | - | chr4_2:29332824-29332843 | Msa0597340:intron | 55.0% | |
| GCAGACTGATCCCTCTGTTC+AGG | - | chr4_2:29333004-29333023 | Msa0597340:intron | 55.0% | |
| CTCAGGGGGTCAATATCTGC+AGG | - | chr4_2:29333412-29333431 | Msa0597340:intron | 55.0% | |
| GGGGGTCAATATCTGCAGGT+TGG | - | chr4_2:29333416-29333435 | Msa0597340:intron | 55.0% | |
| GACGGAGGAGGACCAATGAG+GGG | + | chr4_2:29330962-29330981 | None:intergenic | 60.0% | |
| GAGACGGAGGAGGACCAATG+AGG | + | chr4_2:29330964-29330983 | None:intergenic | 60.0% | |
| TCCTCCTCCGTCTCAGACTG+AGG | - | chr4_2:29330970-29330989 | Msa0597340:three_prime_UTR | 60.0% | |
| ! | ACCTCAGTCTGAGACGGAGG+AGG | + | chr4_2:29330974-29330993 | None:intergenic | 60.0% |
| GCGGCAACTGTGGGTCTGTT+TGG | + | chr4_2:29331442-29331461 | None:intergenic | 60.0% | |
| GCACGGATACGGACACGACA+CGG | - | chr4_2:29331516-29331535 | Msa0597340:intron | 60.0% | |
| CTTCACGTGCCGAGCTCCTT+AGG | - | chr4_2:29332823-29332842 | Msa0597340:intron | 60.0% | |
| AGGAGCTCGGCACGTGAAGC+AGG | + | chr4_2:29332822-29332841 | None:intergenic | 65.0% | |
| GTGCCGAGCTCCTTAGGGAC+AGG | - | chr4_2:29332829-29332848 | Msa0597340:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_2 | gene | 29330767 | 29334234 | 29330767 | ID=Msa0597340;Name=Msa0597340 |
| chr4_2 | mRNA | 29330767 | 29334234 | 29330767 | ID=Msa0597340-mRNA-1;Parent=Msa0597340;Name=Msa0597340-mRNA-1;_AED=0.14;_eAED=0.14;_QI=0|0.66|0.5|1|1|1|4|224|307 |
| chr4_2 | exon | 29330767 | 29331268 | 29330767 | ID=Msa0597340-mRNA-1:exon:7497;Parent=Msa0597340-mRNA-1 |
| chr4_2 | exon | 29331568 | 29331661 | 29331568 | ID=Msa0597340-mRNA-1:exon:7496;Parent=Msa0597340-mRNA-1 |
| chr4_2 | exon | 29331976 | 29332302 | 29331976 | ID=Msa0597340-mRNA-1:exon:7495;Parent=Msa0597340-mRNA-1 |
| chr4_2 | exon | 29334010 | 29334234 | 29334010 | ID=Msa0597340-mRNA-1:exon:7494;Parent=Msa0597340-mRNA-1 |
| chr4_2 | CDS | 29334010 | 29334234 | 29334010 | ID=Msa0597340-mRNA-1:cds;Parent=Msa0597340-mRNA-1 |
| chr4_2 | CDS | 29331976 | 29332302 | 29331976 | ID=Msa0597340-mRNA-1:cds;Parent=Msa0597340-mRNA-1 |
| chr4_2 | CDS | 29331568 | 29331661 | 29331568 | ID=Msa0597340-mRNA-1:cds;Parent=Msa0597340-mRNA-1 |
| chr4_2 | CDS | 29330991 | 29331268 | 29330991 | ID=Msa0597340-mRNA-1:cds;Parent=Msa0597340-mRNA-1 |
| chr4_2 | three_prime_UTR | 29330767 | 29330990 | 29330767 | ID=Msa0597340-mRNA-1:three_prime_utr;Parent=Msa0597340-mRNA-1 |
| Gene Sequence |
| Protein sequence |
