AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0486530


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0486530 MtrunA17_Chr3g0102841 88.318 214 10 2 1 199 1 214 1.80e-134 375
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0486530 AT4G26555.1 56.039 207 62 5 7 190 7 207 2.80e-67 205
Msa0486530 AT4G26555.2 64.596 161 41 3 46 190 1 161 3.18e-64 196
Msa0486530 AT4G26555.3 51.875 160 59 4 7 154 7 160 2.72e-44 145

Find 62 sgRNAs with CRISPR-Local

Find 134 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAGCATACATCCTCAGATTT+TGG 0.212021 3_4:-4572090 Msa0486530:three_prime_UTR
TAATACTCCCATTCTCAATT+TGG 0.235456 3_4:+4574484 None:intergenic
TGTTTAAAACAGATGATATT+GGG 0.285635 3_4:-4572944 Msa0486530:intron
ATTGTCCGAAACATTGTAAT+TGG 0.298762 3_4:+4571964 None:intergenic
TTGTTTAAAACAGATGATAT+TGG 0.302725 3_4:-4572945 Msa0486530:intron
AAGATAACGCCGTGCACTTT+TGG 0.324796 3_4:-4572056 Msa0486530:three_prime_UTR
CAGACAAACCTTATGACTTC+TGG 0.332375 3_4:+4574131 None:intergenic
ATGTTATTCTTCTCCTGCTT+TGG 0.339105 3_4:-4574180 Msa0486530:CDS
AGAAGCACACAGTGGAGATT+TGG 0.354056 3_4:-4573387 Msa0486530:CDS
AGGTTGATTGTTCAGTTTAT+CGG 0.354737 3_4:-4574218 Msa0486530:CDS
TTCTCATGCACAAGAGCCTT+TGG 0.363353 3_4:-4572316 Msa0486530:CDS
CCTTACCAATTACAATGTTT+CGG 0.366004 3_4:-4571969 Msa0486530:three_prime_UTR
GATTACTTTCTCCATTGAAT+TGG 0.366396 3_4:+4573165 None:intergenic
AAATCTCCACTGTGTGCTTC+TGG 0.380339 3_4:+4573389 None:intergenic
TCATCCAGAGGAAGTATAAC+AGG 0.388887 3_4:+4573143 None:intergenic
TGCTTTGGCTGCACCAATCA+TGG 0.393966 3_4:-4574165 Msa0486530:CDS
GGTTCATTCATGTCCATGAT+TGG 0.398655 3_4:+4574152 None:intergenic
TTGTACCGTTTACGAAATCT+TGG 0.418655 3_4:-4571994 Msa0486530:three_prime_UTR
GGGTTAAAGCAGGTCTTGAC+TGG 0.432983 3_4:-4572923 Msa0486530:CDS
TAATCCTGTTATACTTCCTC+TGG 0.433615 3_4:-4573147 Msa0486530:CDS
AGAACAAAGCAGTGTTAGAT+AGG 0.441357 3_4:-4572129 Msa0486530:three_prime_UTR
CAAAGCAGTGTTAGATAGGA+TGG 0.449896 3_4:-4572125 Msa0486530:three_prime_UTR
GCCAATGGAGTGAGAATTCA+AGG 0.457506 3_4:-4573977 Msa0486530:intron
ACTTCCTTCCAAATTGAGAA+TGG 0.457588 3_4:-4574492 Msa0486530:exon
CTTCCTTCCAAATTGAGAAT+GGG 0.464378 3_4:-4574491 Msa0486530:exon
ACCTTGAATTCTCACTCCAT+TGG 0.488544 3_4:+4573976 None:intergenic
CCGAAACATTGTAATTGGTA+AGG 0.489244 3_4:+4571969 None:intergenic
ATGATTGGTGCAGCCAAAGC+AGG 0.489354 3_4:+4574167 None:intergenic
TGTGTATGCAGGCGTGCAAA+TGG 0.496678 3_4:-4573353 Msa0486530:CDS
AGGCACCAAGATTTCGTAAA+CGG 0.499317 3_4:+4571989 None:intergenic
TGAATGAACCAGAAGTCATA+AGG 0.510966 3_4:-4574139 Msa0486530:intron
TAATTAAATTCAGCTTGTTG+TGG 0.514163 3_4:+4572258 None:intergenic
TTGAATTCAATTGTGTATGC+AGG 0.514249 3_4:-4573364 Msa0486530:CDS
ACTTCCTCTGGATGAGGACC+AGG 0.515288 3_4:-4573135 Msa0486530:intron
GCAGAGACGGAAGCAGCATA+TGG 0.516780 3_4:+4574443 None:intergenic
GAGAAAGAAGGCTGCGTCGA+GGG 0.529313 3_4:+4572334 None:intergenic
GTTTAAAACAGATGATATTG+GGG 0.530275 3_4:-4572943 Msa0486530:intron
AGTACAGTAGACCAATTCAA+TGG 0.540259 3_4:-4573176 Msa0486530:CDS
GTCTTGACTGGCATGAGAGT+TGG 0.540633 3_4:-4572911 Msa0486530:CDS
GCTCTTGTGCATGAGAAAGA+AGG 0.541224 3_4:+4572322 None:intergenic
GATGATATTGGGGTTAAAGC+AGG 0.544987 3_4:-4572933 Msa0486530:CDS
TTGACTGGCATGAGAGTTGG+TGG 0.545256 3_4:-4572908 Msa0486530:intron
TTGATCTTCTAAGATCATAG+AGG 0.548678 3_4:-4572192 Msa0486530:three_prime_UTR
CTTCCGTCTCTGCTTCTCCA+AGG 0.555396 3_4:-4574433 Msa0486530:intron
AGGACTTTGAAGCTTGCCAA+TGG 0.556416 3_4:-4573992 Msa0486530:CDS
TGTTATACTTCCTCTGGATG+AGG 0.558694 3_4:-4573141 Msa0486530:CDS
ACTCCCATTCTCAATTTGGA+AGG 0.560845 3_4:+4574488 None:intergenic
GCATTGATTCCACCTTCTGT+AGG 0.568687 3_4:-4572627 Msa0486530:CDS
TGGAAGGAAGTTCACAACTC+AGG 0.571522 3_4:+4574504 None:intergenic
GAGAAGAATAACATAATATG+TGG 0.575707 3_4:+4574189 None:intergenic
GAGACGGAAGCAGCATATGG+TGG 0.576235 3_4:+4574446 None:intergenic
CTAATTGCAGCCAAAATCTG+AGG 0.577448 3_4:+4572080 None:intergenic
TCTACATATCCTACAGAAGG+TGG 0.586098 3_4:+4572618 None:intergenic
TGATCTTCTAAGATCATAGA+GGG 0.597619 3_4:-4572191 Msa0486530:three_prime_UTR
TCATCTACATATCCTACAGA+AGG 0.617979 3_4:+4572615 None:intergenic
ATACCTTGGAGAAGCAGAGA+CGG 0.631916 3_4:+4574430 None:intergenic
TGAGAAAGAAGGCTGCGTCG+AGG 0.645568 3_4:+4572333 None:intergenic
AGTTGAACTTCAAATACCAA+AGG 0.649057 3_4:+4572300 None:intergenic
GAAGGACCAGAAGCACACAG+TGG 0.691666 3_4:-4573395 Msa0486530:CDS
CTAACCTGGTCCTCATCCAG+AGG 0.693869 3_4:+4573131 None:intergenic
ACTGTGATACCAAAAGTGCA+CGG 0.701893 3_4:+4572047 None:intergenic
TCATGAATCCAGGTGCACTG+AGG 0.729193 3_4:-4574300 Msa0486530:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAAAACATGATATTGTTTTT+AGG + chr3_4:4572034-4572053 None:intergenic 15.0%
!! TTCATGATATGAATTAATAA+TGG - chr3_4:4573080-4573099 Msa0486530:intron 15.0%
!! TCATGATATGAATTAATAAT+GGG - chr3_4:4573081-4573100 Msa0486530:intron 15.0%
!!! TATTTTCATAAAGAAATAGA+AGG - chr3_4:4574232-4574251 Msa0486530:CDS 15.0%
!!! ATTTTCATAAAGAAATAGAA+GGG - chr3_4:4574233-4574252 Msa0486530:CDS 15.0%
!! CAAATAGAAATGAAAATTCT+TGG - chr3_4:4572842-4572861 Msa0486530:intron 20.0%
!! ATGTATTTATTCACAACTAA+AGG + chr3_4:4572918-4572937 None:intergenic 20.0%
!!! ATTGAGTTGAAGAATATAAA+GGG + chr3_4:4573375-4573394 None:intergenic 20.0%
!!! AATTGAGTTGAAGAATATAA+AGG + chr3_4:4573376-4573395 None:intergenic 20.0%
!!! TTGTTTAAAACAGATGATAT+TGG - chr3_4:4573445-4573464 Msa0486530:intron 20.0%
!!! TGTTTAAAACAGATGATATT+GGG - chr3_4:4573446-4573465 Msa0486530:intron 20.0%
!! ATATATAAGAAAATCATGAG+AGG + chr3_4:4573553-4573572 None:intergenic 20.0%
! TAGAATGAAATGAATTAGAG+AGG + chr3_4:4571995-4572014 None:intergenic 25.0%
! CGAAAAAATATTGTTCAAGA+AGG - chr3_4:4572152-4572171 Msa0486530:three_prime_UTR 25.0%
! GAGAAGAATAACATAATATG+TGG + chr3_4:4572204-4572223 None:intergenic 25.0%
!!! TATTTTTATGTGAAGCATCT+AGG - chr3_4:4572378-4572397 Msa0486530:intron 25.0%
! CACAATTTAAACACACAATA+TGG + chr3_4:4572586-4572605 None:intergenic 25.0%
! CATATTGTGTGTTTAAATTG+TGG - chr3_4:4572584-4572603 Msa0486530:intron 25.0%
! CCACAATATAAAAGTTTAAG+AGG + chr3_4:4572712-4572731 None:intergenic 25.0%
!! CCTCTTAAACTTTTATATTG+TGG - chr3_4:4572709-4572728 Msa0486530:intron 25.0%
! TTCAAATTAGTTGTTACTGA+AGG - chr3_4:4572971-4572990 Msa0486530:intron 25.0%
! TCAAATTAGTTGTTACTGAA+GGG - chr3_4:4572972-4572991 Msa0486530:intron 25.0%
! TTGAAAGAAATAAACTAACC+TGG + chr3_4:4573276-4573295 None:intergenic 25.0%
!! AGTTTATTTCTTTCAACTTG+TGG - chr3_4:4573280-4573299 Msa0486530:intron 25.0%
!! GTTTATTTCTTTCAACTTGT+GGG - chr3_4:4573281-4573300 Msa0486530:intron 25.0%
! ACTCAATTTATCATAAACTG+AGG - chr3_4:4573388-4573407 Msa0486530:CDS 25.0%
!! GTTTAAAACAGATGATATTG+GGG - chr3_4:4573447-4573466 Msa0486530:intron 25.0%
!! TTTTTGTGTTTATTGCAGTT+TGG - chr3_4:4574033-4574052 Msa0486530:intron 25.0%
!!! TAATTAAATTCAGCTTGTTG+TGG + chr3_4:4574135-4574154 None:intergenic 25.0%
!! TAGTTTTTGCAGGATTATAA+CGG + chr3_4:4574372-4574391 None:intergenic 25.0%
TAATACTCCCATTCTCAATT+TGG + chr3_4:4571909-4571928 None:intergenic 30.0%
AGAGGAAACAATATATACCT+TGG + chr3_4:4571977-4571996 None:intergenic 30.0%
! AGGTTGATTGTTCAGTTTAT+CGG - chr3_4:4572172-4572191 Msa0486530:three_prime_UTR 30.0%
GACTTACATGTTAGATTTCT+TGG - chr3_4:4572451-4572470 Msa0486530:intron 30.0%
TGCTAGGATATCATATATCA+AGG + chr3_4:4572628-4572647 None:intergenic 30.0%
ATAAAAGTTTAAGAGGTCAC+TGG + chr3_4:4572705-4572724 None:intergenic 30.0%
TACTGTCAAACAATATGATG+CGG + chr3_4:4572783-4572802 None:intergenic 30.0%
CAAATTAGTTGTTACTGAAG+GGG - chr3_4:4572973-4572992 Msa0486530:intron 30.0%
TTGAATTCAATTGTGTATGC+AGG - chr3_4:4573026-4573045 Msa0486530:intron 30.0%
!!! CAAATGGATACTTTGTTTTC+AGG - chr3_4:4573053-4573072 Msa0486530:intron 30.0%
TTGACTTAAGCACAATACAA+GGG + chr3_4:4573151-4573170 None:intergenic 30.0%
! ATTGACTTAAGCACAATACA+AGG + chr3_4:4573152-4573171 None:intergenic 30.0%
GATTACTTTCTCCATTGAAT+TGG + chr3_4:4573228-4573247 None:intergenic 30.0%
TTTACTATTCCTTTCTGATG+AGG - chr3_4:4573326-4573345 Msa0486530:intron 30.0%
AATAAGAAACCTCATCAGAA+AGG + chr3_4:4573338-4573357 None:intergenic 30.0%
AAAATCATGAGAGGAAATAC+TGG + chr3_4:4573544-4573563 None:intergenic 30.0%
!! TGAAATGACTCATGTCATTT+TGG - chr3_4:4573590-4573609 Msa0486530:intron 30.0%
CATACATGTATATGACAATC+TGG - chr3_4:4573626-4573645 Msa0486530:intron 30.0%
ACTAAATTATACAGGACTAG+TGG + chr3_4:4573661-4573680 None:intergenic 30.0%
! TGTATCTTTTGATGTCATTG+TGG - chr3_4:4573707-4573726 Msa0486530:intron 30.0%
! AGTTTTGCACTTGAATACAA+AGG - chr3_4:4573826-4573845 Msa0486530:intron 30.0%
! ACTTTACTCTCAAACTTGTT+TGG - chr3_4:4573923-4573942 Msa0486530:intron 30.0%
AGTTGAACTTCAAATACCAA+AGG + chr3_4:4574093-4574112 None:intergenic 30.0%
!! TTGATCTTCTAAGATCATAG+AGG - chr3_4:4574198-4574217 Msa0486530:CDS 30.0%
!! TGATCTTCTAAGATCATAGA+GGG - chr3_4:4574199-4574218 Msa0486530:CDS 30.0%
! GTACAATATGTAGTTTTTGC+AGG + chr3_4:4574382-4574401 None:intergenic 30.0%
CCTTACCAATTACAATGTTT+CGG - chr3_4:4574421-4574440 Msa0486530:intron 30.0%
ATTGTCCGAAACATTGTAAT+TGG + chr3_4:4574429-4574448 None:intergenic 30.0%
ACTTCCTTCCAAATTGAGAA+TGG - chr3_4:4571898-4571917 Msa0486530:three_prime_UTR 35.0%
CTTCCTTCCAAATTGAGAAT+GGG - chr3_4:4571899-4571918 Msa0486530:three_prime_UTR 35.0%
CTTAAAACTCTCATGAATCC+AGG - chr3_4:4572080-4572099 Msa0486530:three_prime_UTR 35.0%
ATGTTATTCTTCTCCTGCTT+TGG - chr3_4:4572210-4572229 Msa0486530:three_prime_UTR 35.0%
TGAATGAACCAGAAGTCATA+AGG - chr3_4:4572251-4572270 Msa0486530:exon 35.0%
AACTTTGAGCTTGCATTTAC+TGG - chr3_4:4572515-4572534 Msa0486530:intron 35.0%
AACCACAATTGCAACCAAAT+TGG + chr3_4:4572668-4572687 None:intergenic 35.0%
!! GAGAACATAGTTCTGAATTG+CGG + chr3_4:4572761-4572780 None:intergenic 35.0%
ATAACTGTCCTAATGTTGCT+TGG - chr3_4:4573170-4573189 Msa0486530:CDS 35.0%
GTATGAAACCAAGCAACATT+AGG + chr3_4:4573181-4573200 None:intergenic 35.0%
AGTACAGTAGACCAATTCAA+TGG - chr3_4:4573214-4573233 Msa0486530:intron 35.0%
TAATCCTGTTATACTTCCTC+TGG - chr3_4:4573243-4573262 Msa0486530:intron 35.0%
AAACACATTTCAGAGTTCTC+TGG + chr3_4:4573309-4573328 None:intergenic 35.0%
ATACATGTATGCCAAAGGTT+TGG + chr3_4:4573617-4573636 None:intergenic 35.0%
GTCATATACATGTATGCCAA+AGG + chr3_4:4573622-4573641 None:intergenic 35.0%
CAGTCACGACTAAATTATAC+AGG + chr3_4:4573669-4573688 None:intergenic 35.0%
!!! TCGTGACTGTTATTTTTGTG+TGG - chr3_4:4573680-4573699 Msa0486530:intron 35.0%
TCATCTACATATCCTACAGA+AGG + chr3_4:4573778-4573797 None:intergenic 35.0%
AAACTAACCTCTTCTGGTAT+TGG + chr3_4:4573811-4573830 None:intergenic 35.0%
AGAACAAAGCAGTGTTAGAT+AGG - chr3_4:4574261-4574280 Msa0486530:CDS 35.0%
TTGTACCGTTTACGAAATCT+TGG - chr3_4:4574396-4574415 Msa0486530:intron 35.0%
CCGAAACATTGTAATTGGTA+AGG + chr3_4:4574424-4574443 None:intergenic 35.0%
ACTCCCATTCTCAATTTGGA+AGG + chr3_4:4571905-4571924 None:intergenic 40.0%
GGTTCATTCATGTCCATGAT+TGG + chr3_4:4572241-4572260 None:intergenic 40.0%
CAGACAAACCTTATGACTTC+TGG + chr3_4:4572262-4572281 None:intergenic 40.0%
ACCTTGAATTCTCACTCCAT+TGG + chr3_4:4572417-4572436 None:intergenic 40.0%
TTAGTTGTTACTGAAGGGGA+AGG - chr3_4:4572977-4572996 Msa0486530:intron 40.0%
! TCATCCAGAGGAAGTATAAC+AGG + chr3_4:4573250-4573269 None:intergenic 40.0%
TGTTATACTTCCTCTGGATG+AGG - chr3_4:4573249-4573268 Msa0486530:intron 40.0%
GATGATATTGGGGTTAAAGC+AGG - chr3_4:4573457-4573476 Msa0486530:intron 40.0%
AGAGGAAATACTGGTATGTC+AGG + chr3_4:4573535-4573554 None:intergenic 40.0%
!! GTCATTTTGGTCCAAACCTT+TGG - chr3_4:4573603-4573622 Msa0486530:intron 40.0%
TCTACATATCCTACAGAAGG+TGG + chr3_4:4573775-4573794 None:intergenic 40.0%
AGTGCAAAACTAACCTCTTC+TGG + chr3_4:4573817-4573836 None:intergenic 40.0%
ACCACTTCAGCTATGTAATG+AGG - chr3_4:4573958-4573977 Msa0486530:intron 40.0%
TCCTCATTACATAGCTGAAG+TGG + chr3_4:4573962-4573981 None:intergenic 40.0%
CAAAGCAGTGTTAGATAGGA+TGG - chr3_4:4574265-4574284 Msa0486530:CDS 40.0%
! CAGCATACATCCTCAGATTT+TGG - chr3_4:4574300-4574319 Msa0486530:intron 40.0%
CTAATTGCAGCCAAAATCTG+AGG + chr3_4:4574313-4574332 None:intergenic 40.0%
! ACTGTGATACCAAAAGTGCA+CGG + chr3_4:4574346-4574365 None:intergenic 40.0%
AGGCACCAAGATTTCGTAAA+CGG + chr3_4:4574404-4574423 None:intergenic 40.0%
TGGAAGGAAGTTCACAACTC+AGG + chr3_4:4571889-4571908 None:intergenic 45.0%
ATACCTTGGAGAAGCAGAGA+CGG + chr3_4:4571963-4571982 None:intergenic 45.0%
!! AGGACTTTGAAGCTTGCCAA+TGG - chr3_4:4572398-4572417 Msa0486530:intron 45.0%
GCCAATGGAGTGAGAATTCA+AGG - chr3_4:4572413-4572432 Msa0486530:intron 45.0%
CTAGCAAAACGCAGCATATG+CGG - chr3_4:4572642-4572661 Msa0486530:intron 45.0%
GGCCAATTTGGTTGCAATTG+TGG - chr3_4:4572663-4572682 Msa0486530:intron 45.0%
AAATCTCCACTGTGTGCTTC+TGG + chr3_4:4573004-4573023 None:intergenic 45.0%
! AGAAGCACACAGTGGAGATT+TGG - chr3_4:4573003-4573022 Msa0486530:intron 45.0%
GATGTCATTGTGGTCACTCT+TGG - chr3_4:4573717-4573736 Msa0486530:intron 45.0%
TCACTCTTGGCTTCACTTGT+AGG - chr3_4:4573730-4573749 Msa0486530:intron 45.0%
!! GCATTGATTCCACCTTCTGT+AGG - chr3_4:4573763-4573782 Msa0486530:intron 45.0%
CTTGAAGCCAATACCAGAAG+AGG - chr3_4:4573801-4573820 Msa0486530:intron 45.0%
GCTCTTGTGCATGAGAAAGA+AGG + chr3_4:4574071-4574090 None:intergenic 45.0%
TTCTCATGCACAAGAGCCTT+TGG - chr3_4:4574074-4574093 Msa0486530:intron 45.0%
! AAGATAACGCCGTGCACTTT+TGG - chr3_4:4574334-4574353 Msa0486530:intron 45.0%
TCATGAATCCAGGTGCACTG+AGG - chr3_4:4572090-4572109 Msa0486530:three_prime_UTR 50.0%
ATGATTGGTGCAGCCAAAGC+AGG + chr3_4:4572226-4572245 None:intergenic 50.0%
TGCTTTGGCTGCACCAATCA+TGG - chr3_4:4572225-4572244 Msa0486530:three_prime_UTR 50.0%
GTCACTCGTGTTTGACGCAA+AGG - chr3_4:4572544-4572563 Msa0486530:intron 50.0%
! CGCATATGCTGCGTTTTGCT+AGG + chr3_4:4572644-4572663 None:intergenic 50.0%
! GGTCTGAAACTGCAAACTGC+AGG + chr3_4:4572740-4572759 None:intergenic 50.0%
TGTGTATGCAGGCGTGCAAA+TGG - chr3_4:4573037-4573056 Msa0486530:intron 50.0%
GGGTTAAAGCAGGTCTTGAC+TGG - chr3_4:4573467-4573486 Msa0486530:intron 50.0%
GTCTTGACTGGCATGAGAGT+TGG - chr3_4:4573479-4573498 Msa0486530:intron 50.0%
TTGACTGGCATGAGAGTTGG+TGG - chr3_4:4573482-4573501 Msa0486530:intron 50.0%
GAGACGGAAGCAGCATATGG+TGG + chr3_4:4571947-4571966 None:intergenic 55.0%
GCAGAGACGGAAGCAGCATA+TGG + chr3_4:4571950-4571969 None:intergenic 55.0%
CTTCCGTCTCTGCTTCTCCA+AGG - chr3_4:4571957-4571976 Msa0486530:three_prime_UTR 55.0%
CTTTGCATCCTCAGTGCACC+TGG + chr3_4:4572101-4572120 None:intergenic 55.0%
CGCAGCATATGCGGCCAATT+TGG - chr3_4:4572651-4572670 Msa0486530:intron 55.0%
! GAAGGACCAGAAGCACACAG+TGG - chr3_4:4572995-4573014 Msa0486530:intron 55.0%
ACTTCCTCTGGATGAGGACC+AGG - chr3_4:4573255-4573274 Msa0486530:intron 55.0%
CTAACCTGGTCCTCATCCAG+AGG + chr3_4:4573262-4573281 None:intergenic 55.0%
GAGAAAGAAGGCTGCGTCGA+GGG + chr3_4:4574059-4574078 None:intergenic 55.0%
TGAGAAAGAAGGCTGCGTCG+AGG + chr3_4:4574060-4574079 None:intergenic 55.0%
Chromosome Type Strat End Strand Name
chr3_4 gene 4571874 4574538 4571874 ID=Msa0486530;Name=Msa0486530
chr3_4 mRNA 4571874 4574538 4571874 ID=Msa0486530-mRNA-1;Parent=Msa0486530;Name=Msa0486530-mRNA-1;_AED=0.31;_eAED=0.31;_QI=43|0.85|0.87|1|0.85|0.87|8|383|199
chr3_4 exon 4571874 4572361 4571874 ID=Msa0486530-mRNA-1:exon:1715;Parent=Msa0486530-mRNA-1
chr3_4 exon 4572623 4572660 4572623 ID=Msa0486530-mRNA-1:exon:1714;Parent=Msa0486530-mRNA-1
chr3_4 exon 4572909 4572954 4572909 ID=Msa0486530-mRNA-1:exon:1713;Parent=Msa0486530-mRNA-1
chr3_4 exon 4573136 4573196 4573136 ID=Msa0486530-mRNA-1:exon:1712;Parent=Msa0486530-mRNA-1
chr3_4 exon 4573338 4573419 4573338 ID=Msa0486530-mRNA-1:exon:1711;Parent=Msa0486530-mRNA-1
chr3_4 exon 4573978 4574012 4573978 ID=Msa0486530-mRNA-1:exon:1710;Parent=Msa0486530-mRNA-1
chr3_4 exon 4574140 4574310 4574140 ID=Msa0486530-mRNA-1:exon:1709;Parent=Msa0486530-mRNA-1
chr3_4 exon 4574434 4574538 4574434 ID=Msa0486530-mRNA-1:exon:1708;Parent=Msa0486530-mRNA-1
chr3_4 five_prime_UTR 4574496 4574538 4574496 ID=Msa0486530-mRNA-1:five_prime_utr;Parent=Msa0486530-mRNA-1
chr3_4 CDS 4574434 4574495 4574434 ID=Msa0486530-mRNA-1:cds;Parent=Msa0486530-mRNA-1
chr3_4 CDS 4574140 4574310 4574140 ID=Msa0486530-mRNA-1:cds;Parent=Msa0486530-mRNA-1
chr3_4 CDS 4573978 4574012 4573978 ID=Msa0486530-mRNA-1:cds;Parent=Msa0486530-mRNA-1
chr3_4 CDS 4573338 4573419 4573338 ID=Msa0486530-mRNA-1:cds;Parent=Msa0486530-mRNA-1
chr3_4 CDS 4573136 4573196 4573136 ID=Msa0486530-mRNA-1:cds;Parent=Msa0486530-mRNA-1
chr3_4 CDS 4572909 4572954 4572909 ID=Msa0486530-mRNA-1:cds;Parent=Msa0486530-mRNA-1
chr3_4 CDS 4572623 4572660 4572623 ID=Msa0486530-mRNA-1:cds;Parent=Msa0486530-mRNA-1
chr3_4 CDS 4572257 4572361 4572257 ID=Msa0486530-mRNA-1:cds;Parent=Msa0486530-mRNA-1
chr3_4 three_prime_UTR 4571874 4572256 4571874 ID=Msa0486530-mRNA-1:three_prime_utr;Parent=Msa0486530-mRNA-1
Gene Sequence

>Msa0486530

ATGGGAGTATTATCATTTCTCTCACTTCCACCATATGCTGCTTCCGTCTCTGCTTCTCCAAGGTGCACTGAGGATGCAAAGAGCTCGAACAACAAAATTTCTACATTAACAGCGAAAAAATATTGTTCAAGAAGGTTGATTGTTCAGTTTATCGGTATTAACCACATATTATGTTATTCTTCTCCTGCTTTGGCTGCACCAATCATGGACATGAATGAACCAGAAGTCATAAGGACTTTGAAGCTTGCCAATGGAGTGAGAATTCAAGGGGAAGGACCAGAAGCACACAGTGGAGATTTGGTTGAATTCAATTGTGTATGCAGGCGTGCAAATGGATACTTTGTTTTCAGTACAGTAGACCAATTCAATGGAGAAAGTAATCCTGTTATACTTCCTCTGGATGAGGACCAGATGATATTGGGGTTAAAGCAGGTCTTGACTGGCATGAGAGTTGGTGGAAAGAGAAGAGCATTGATTCCACCTTCTGTAGGATATTTTGGCCCTCGACGCAGCCTTCTTTCTCATGCACAAGAGCCTTTGGTATTTGAAGTTCAACTCTTGAAAATTCTGAGTGTTCCACAACAAGCTGAATTTAATTAG

Protein sequence

>Msa0486530

MGVLSFLSLPPYAASVSASPRCTEDAKSSNNKISTLTAKKYCSRRLIVQFIGINHILCYSSPALAAPIMDMNEPEVIRTLKLANGVRIQGEGPEAHSGDLVEFNCVCRRANGYFVFSTVDQFNGESNPVILPLDEDQMILGLKQVLTGMRVGGKRRALIPPSVGYFGPRRSLLSHAQEPLVFEVQLLKILSVPQQAEFN*