AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0419980


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0419980 MtrunA17_Chr3g0118671 80.503 477 42 3 1 426 1 477 0.0 775
Msa0419980 MtrunA17_Chr3g0118771 69.311 479 92 3 3 428 18 494 0.0 669
Msa0419980 MtrunA17_Chr3g0118691 67.015 479 107 3 1 428 10 488 0.0 655
Msa0419980 MtrunA17_Chr3g0118711 66.807 476 107 3 3 427 10 485 0.0 651
Msa0419980 MtrunA17_Chr3g0118701 65.136 479 116 3 1 428 10 488 0.0 634
Msa0419980 MtrunA17_Chr3g0118751 65.344 479 86 5 1 428 1 450 0.0 607
Msa0419980 MtrunA17_Chr3g0118661 53.249 477 171 5 3 428 10 485 2.65e-168 481
Msa0419980 MtrunA17_Chr3g0118721 72.203 295 47 1 169 428 1 295 2.27e-155 441
Msa0419980 MtrunA17_Chr3g0092641 47.660 470 193 8 5 423 11 478 1.48e-147 428
Msa0419980 MtrunA17_Chr5g0426431 46.482 469 198 7 6 423 12 478 1.67e-147 428
Msa0419980 MtrunA17_Chr3g0078841 44.468 479 211 6 2 427 6 482 1.29e-144 421
Msa0419980 MtrunA17_Chr6g0454331 45.436 482 206 6 2 427 3 483 4.75e-144 419
Msa0419980 MtrunA17_Chr6g0454351 46.204 461 206 9 2 423 8 465 1.35e-143 417
Msa0419980 MtrunA17_Chr6g0454191 45.643 482 202 10 3 427 7 485 4.46e-143 417
Msa0419980 MtrunA17_Chr6g0454341 44.561 478 212 5 2 427 6 482 6.97e-143 416
Msa0419980 MtrunA17_Chr8g0336331 44.864 477 211 7 2 427 6 481 5.01e-141 411
Msa0419980 MtrunA17_Chr6g0454301 45.188 478 201 6 2 423 259 731 1.08e-139 416
Msa0419980 MtrunA17_Chr6g0454301 56.364 165 71 1 257 421 65 228 7.42e-64 218
Msa0419980 MtrunA17_Chr6g0454201 46.791 483 192 10 4 427 9 485 2.30e-138 405
Msa0419980 MtrunA17_Chr6g0453951 44.538 476 209 9 2 423 53 527 6.07e-138 405
Msa0419980 MtrunA17_Chr6g0454401 45.073 477 206 9 2 423 6 481 8.40e-138 403
Msa0419980 MtrunA17_Chr2g0278711 43.606 477 206 8 3 423 8 477 4.29e-137 401
Msa0419980 MtrunA17_Chr4g0050341 44.444 477 204 8 4 422 17 490 9.44e-137 401
Msa0419980 MtrunA17_Chr6g0454321 43.162 468 213 6 2 417 6 472 2.37e-135 403
Msa0419980 MtrunA17_Chr6g0454321 50.407 123 56 2 3 120 501 623 2.06e-30 124
Msa0419980 MtrunA17_Chr6g0454211 45.417 480 207 6 2 427 293 771 1.18e-134 405
Msa0419980 MtrunA17_Chr6g0454211 34.471 293 106 4 148 422 43 267 6.99e-43 160
Msa0419980 MtrunA17_Chr6g0454181 42.412 481 218 8 3 427 7 484 1.11e-133 393
Msa0419980 MtrunA17_Chr6g0453961 45.053 475 205 9 4 423 17 490 1.52e-133 393
Msa0419980 MtrunA17_Chr8g0359821 42.887 478 220 7 2 427 6 482 3.61e-132 389
Msa0419980 MtrunA17_Chr6g0454291 43.908 476 212 6 2 423 3 477 1.71e-131 387
Msa0419980 MtrunA17_Chr6g0454361 44.726 474 207 8 4 423 9 481 1.73e-131 387
Msa0419980 MtrunA17_Chr6g0454261 41.875 480 224 7 2 427 6 484 5.43e-128 378
Msa0419980 MtrunA17_Chr5g0423981 43.791 459 198 8 4 423 8 445 6.53e-126 372
Msa0419980 MtrunA17_Chr6g0452771 43.158 475 215 8 3 423 7 480 5.16e-125 370
Msa0419980 MtrunA17_Chr6g0454141 41.042 480 228 8 2 427 6 484 3.30e-124 369
Msa0419980 MtrunA17_Chr7g0217881 42.672 464 219 9 1 423 5 462 4.00e-124 368
Msa0419980 MtrunA17_Chr6g0454151 42.380 479 219 8 2 426 6 481 5.20e-123 365
Msa0419980 MtrunA17_Chr6g0454131 42.283 473 219 9 4 423 8 479 8.58e-122 362
Msa0419980 MtrunA17_Chr6g0454121 41.509 477 225 8 4 427 8 483 6.82e-121 360
Msa0419980 MtrunA17_Chr6g0454251 42.132 394 173 6 2 341 3 395 4.83e-105 317
Msa0419980 MtrunA17_Chr5g0426401 45.367 313 131 7 148 423 2 311 1.77e-89 274
Msa0419980 MtrunA17_Chr6g0454271 46.233 292 123 5 169 427 1 291 2.79e-84 259
Msa0419980 MtrunA17_Chr8g0355011 41.916 334 164 6 112 427 45 366 1.47e-83 260
Msa0419980 MtrunA17_Chr6g0454171 40.391 307 130 6 141 423 33 310 2.78e-73 232
Msa0419980 MtrunA17_Chr3g0112771 32.385 457 252 14 7 423 13 452 1.43e-68 224
Msa0419980 MtrunA17_Chr5g0412131 31.857 474 252 15 5 422 11 469 3.56e-66 219
Msa0419980 MtrunA17_Chr6g0454221 56.024 166 72 1 256 421 65 229 1.99e-65 211
Msa0419980 MtrunA17_Chr3g0112761 29.915 468 253 12 6 423 8 450 3.91e-64 213
Msa0419980 MtrunA17_Chr5g0412101 31.198 484 243 13 5 422 11 470 6.07e-64 213
Msa0419980 MtrunA17_Chr5g0412111 31.172 478 253 13 3 422 2 461 8.15e-64 212
Msa0419980 MtrunA17_Chr6g0454371 54.762 168 75 1 256 423 5 171 3.36e-63 201
Msa0419980 MtrunA17_Chr8g0336271 44.770 239 115 3 2 223 6 244 8.15e-62 201
Msa0419980 MtrunA17_Chr6g0464881 30.444 473 254 13 2 423 7 455 1.33e-59 201
Msa0419980 MtrunA17_Chr6g0454231 44.828 232 110 3 2 215 246 477 1.58e-58 199
Msa0419980 MtrunA17_Chr6g0454231 43.891 221 117 3 204 423 5 219 9.81e-56 191
Msa0419980 MtrunA17_Chr4g0032331 30.835 467 260 13 4 426 6 453 9.54e-58 196
Msa0419980 MtrunA17_Chr5g0414331 29.004 462 256 11 6 419 13 450 3.76e-57 194
Msa0419980 MtrunA17_Chr7g0249981 29.550 467 266 14 4 426 23 470 4.28e-57 195
Msa0419980 MtrunA17_Chr6g0464921 28.261 460 274 9 5 422 10 455 3.12e-56 192
Msa0419980 MtrunA17_Chr6g0464871 29.437 462 269 9 6 425 23 469 8.01e-56 191
Msa0419980 MtrunA17_Chr8g0336261 59.231 130 52 1 256 385 5 133 6.64e-55 178
Msa0419980 MtrunA17_Chr5g0414321 27.932 469 266 11 6 426 11 455 2.52e-53 184
Msa0419980 MtrunA17_Chr7g0250001 28.355 462 270 11 1 419 1 444 1.55e-52 182
Msa0419980 MtrunA17_Chr6g0464841 29.399 466 262 11 6 424 11 456 2.94e-51 179
Msa0419980 MtrunA17_Chr1g0207931 32.414 435 225 18 6 411 92 486 1.36e-50 178
Msa0419980 MtrunA17_Chr6g0464861 29.114 474 260 11 2 424 7 455 1.87e-50 177
Msa0419980 MtrunA17_Chr8g0365811 28.078 463 263 13 7 411 496 946 2.34e-49 180
Msa0419980 MtrunA17_Chr8g0365811 25.778 450 268 11 6 397 9 450 5.23e-41 155
Msa0419980 MtrunA17_Chr3g0098111 26.964 471 292 11 6 428 9 475 5.24e-49 173
Msa0419980 MtrunA17_Chr7g0218811 29.825 456 256 15 5 419 14 446 1.16e-48 172
Msa0419980 MtrunA17_Chr7g0218831 28.035 453 269 13 5 420 5 437 2.05e-48 171
Msa0419980 MtrunA17_Chr1g0207861 28.571 490 260 15 6 428 8 474 3.16e-48 171
Msa0419980 MtrunA17_Chr1g0207971 26.722 479 262 14 6 425 8 456 4.99e-48 170
Msa0419980 MtrunA17_Chr1g0207981 27.066 484 264 13 6 423 13 473 1.07e-47 170
Msa0419980 MtrunA17_Chr7g0218791 29.412 459 254 18 5 415 4 440 5.28e-47 167
Msa0419980 MtrunA17_Chr7g0218821 29.412 442 252 15 5 399 4 432 1.45e-46 166
Msa0419980 MtrunA17_Chr5g0401721 27.235 481 286 15 3 428 5 476 4.80e-46 165
Msa0419980 MtrunA17_Chr7g0218841 27.912 455 268 17 5 420 5 438 5.53e-46 164
Msa0419980 MtrunA17_Chr5g0426411 55.556 135 59 1 2 135 8 142 8.31e-46 156
Msa0419980 MtrunA17_Chr1g0207831 27.586 493 254 16 7 428 9 469 9.27e-46 164
Msa0419980 MtrunA17_Chr1g0207951 26.793 474 269 14 6 425 124 573 3.55e-45 168
Msa0419980 MtrunA17_Chr1g0207951 26.539 471 286 12 6 428 656 1114 3.72e-44 165
Msa0419980 MtrunA17_Chr8g0380531 26.552 467 278 13 6 424 10 459 5.17e-45 162
Msa0419980 MtrunA17_Chr4g0053501 27.215 474 278 16 6 427 11 469 7.18e-45 162
Msa0419980 MtrunA17_Chr3g0122001 27.721 487 272 15 1 422 481 952 1.99e-44 166
Msa0419980 MtrunA17_Chr3g0122001 27.812 489 270 16 1 422 1 473 4.78e-41 155
Msa0419980 MtrunA17_Chr1g0161351 27.254 477 275 13 6 424 37 499 3.78e-44 160
Msa0419980 MtrunA17_Chr4g0053321 26.778 478 285 14 2 427 20 484 4.03e-44 160
Msa0419980 MtrunA17_Chr6g0454281 44.211 190 85 4 2 170 6 195 7.37e-44 152
Msa0419980 MtrunA17_Chr6g0449931 30.608 477 244 22 1 411 1 456 8.41e-43 156
Msa0419980 MtrunA17_Chr8g0377941 27.140 479 267 14 7 425 8 464 1.07e-42 156
Msa0419980 MtrunA17_Chr8g0377921 27.651 481 268 16 5 423 2 464 2.10e-42 155
Msa0419980 MtrunA17_Chr3g0121991 26.250 480 288 15 1 422 74 545 1.43e-41 154
Msa0419980 MtrunA17_Chr4g0044511 26.025 488 275 15 2 422 36 504 1.64e-41 154
Msa0419980 MtrunA17_Chr7g0249931 26.134 463 281 13 6 424 40 485 4.94e-41 152
Msa0419980 MtrunA17_Chr1g0207881 27.315 432 248 10 6 424 8 386 6.08e-41 150
Msa0419980 MtrunA17_Chr5g0393591 28.381 451 265 13 6 426 17 439 1.02e-40 150
Msa0419980 MtrunA17_Chr7g0265041 26.815 496 278 16 5 427 10 493 2.63e-39 147
Msa0419980 MtrunA17_Chr7g0275681 25.820 488 280 16 5 425 11 483 1.82e-38 145
Msa0419980 MtrunA17_Chr8g0366391 27.027 481 275 16 6 422 9 477 2.02e-38 145
Msa0419980 MtrunA17_Chr6g0462571 33.588 262 139 7 191 418 197 457 4.78e-38 144
Msa0419980 MtrunA17_Chr7g0232391 27.083 480 275 17 1 421 1 464 5.64e-38 143
Msa0419980 MtrunA17_Chr5g0431361 25.745 470 268 16 6 422 12 453 7.31e-38 142
Msa0419980 MtrunA17_Chr5g0419761 27.607 489 280 15 6 427 9 490 1.50e-37 142
Msa0419980 MtrunA17_Chr7g0249961 37.714 175 99 3 253 423 92 260 3.26e-37 136
Msa0419980 MtrunA17_Chr5g0431421 26.338 467 276 15 2 423 6 449 4.93e-37 140
Msa0419980 MtrunA17_Chr4g0060511 25.926 486 282 15 6 422 11 487 6.91e-37 140
Msa0419980 MtrunA17_Chr1g0179901 25.349 501 269 19 6 423 16 494 6.96e-37 140
Msa0419980 MtrunA17_Chr6g0453941 32.390 318 117 11 2 282 7 263 7.89e-37 135
Msa0419980 MtrunA17_Chr7g0243631 26.166 493 269 17 6 422 13 486 9.48e-37 140
Msa0419980 MtrunA17_Chr6g0462541 32.192 292 148 9 172 418 173 459 1.01e-36 140
Msa0419980 MtrunA17_Chr5g0431401 26.350 463 279 14 2 422 6 448 1.07e-36 139
Msa0419980 MtrunA17_Chr5g0442541 28.803 493 251 16 3 423 2 466 1.53e-36 139
Msa0419980 MtrunA17_Chr7g0232411 26.446 484 273 18 1 421 1 464 1.63e-36 139
Msa0419980 MtrunA17_Chr7g0243931 26.423 492 277 15 2 422 13 490 1.79e-36 139
Msa0419980 MtrunA17_Chr5g0442521 27.236 492 262 14 3 419 2 472 2.40e-36 139
Msa0419980 MtrunA17_Chr7g0243951 26.061 495 270 17 4 422 9 483 2.65e-36 139
Msa0419980 MtrunA17_Chr7g0232401 26.667 465 278 15 1 411 1 456 3.09e-36 138
Msa0419980 MtrunA17_Chr5g0431441 26.907 472 268 18 6 423 18 466 8.46e-36 137
Msa0419980 MtrunA17_Chr5g0419771 25.553 497 272 17 6 423 36 513 1.08e-35 137
Msa0419980 MtrunA17_Chr8g0373301 27.848 395 236 11 71 418 70 462 1.49e-35 136
Msa0419980 MtrunA17_Chr5g0442491 26.176 489 282 14 3 425 2 477 1.53e-35 137
Msa0419980 MtrunA17_Chr4g0072771 24.561 456 296 11 3 422 22 465 1.73e-35 136
Msa0419980 MtrunA17_Chr8g0336741 27.893 484 253 19 4 418 11 467 3.10e-35 135
Msa0419980 MtrunA17_Chr7g0232311 28.723 470 276 17 1 420 1 461 3.36e-35 135
Msa0419980 MtrunA17_Chr4g0072761 26.386 451 279 12 6 419 15 449 4.23e-35 135
Msa0419980 MtrunA17_Chr5g0440421 26.464 461 270 17 2 396 6 463 4.52e-35 135
Msa0419980 MtrunA17_Chr7g0243871 25.709 494 266 16 3 422 6 472 5.34e-35 135
Msa0419980 MtrunA17_Chr8g0335141 28.151 476 277 19 1 422 4 468 1.43e-34 134
Msa0419980 MtrunA17_Chr7g0243681 25.780 481 281 17 6 422 11 479 2.52e-34 133
Msa0419980 MtrunA17_Chr5g0448521 25.988 481 286 15 3 425 2 470 2.87e-34 133
Msa0419980 MtrunA17_Chr7g0243851 26.294 483 243 15 4 422 9 442 3.36e-34 132
Msa0419980 MtrunA17_Chr4g0044501 26.096 479 279 17 6 422 10 475 3.47e-34 133
Msa0419980 MtrunA17_Chr1g0173121 23.941 472 283 13 7 424 15 464 3.63e-34 132
Msa0419980 MtrunA17_Chr6g0462531 29.452 292 167 9 170 426 180 467 5.09e-34 132
Msa0419980 MtrunA17_Chr7g0243781 25.355 493 272 16 3 422 6 475 6.28e-34 132
Msa0419980 MtrunA17_Chr6g0462551 30.479 292 159 7 166 418 174 460 6.40e-34 132
Msa0419980 MtrunA17_Chr5g0442561 25.615 488 284 14 3 425 2 475 7.69e-34 132
Msa0419980 MtrunA17_Chr5g0442601 25.896 502 269 14 3 425 401 878 8.07e-34 134
Msa0419980 MtrunA17_Chr5g0442601 37.705 122 65 1 253 363 212 333 4.14e-21 96.3
Msa0419980 MtrunA17_Chr4g0066221 26.694 487 290 15 1 427 6 485 9.38e-34 132
Msa0419980 MtrunA17_Chr7g0243771 26.061 495 273 18 1 422 1 475 1.11e-33 132
Msa0419980 MtrunA17_Chr3g0118731 85.294 68 10 0 58 125 28 95 1.57e-33 123
Msa0419980 MtrunA17_Chr1g0159551 25.322 466 273 16 11 424 19 461 1.73e-33 130
Msa0419980 MtrunA17_Chr8g0335161 27.195 467 286 16 1 418 1 462 1.80e-33 130
Msa0419980 MtrunA17_Chr5g0442511 27.848 474 256 16 3 419 46 490 2.07e-33 131
Msa0419980 MtrunA17_Chr5g0442581 25.198 504 266 16 3 423 2 477 2.20e-33 131
Msa0419980 MtrunA17_Chr5g0431371 25.325 462 277 15 6 422 10 448 2.24e-33 130
Msa0419980 MtrunA17_Chr7g0232331 25.100 502 272 20 1 428 1 472 2.62e-33 130
Msa0419980 MtrunA17_Chr7g0232341 26.547 501 254 24 1 422 1 466 4.17e-33 130
Msa0419980 MtrunA17_Chr4g0066201 27.309 498 264 17 1 428 13 482 5.54e-33 129
Msa0419980 MtrunA17_Chr8g0336651 26.947 475 275 16 1 418 1 460 5.72e-33 132
Msa0419980 MtrunA17_Chr8g0336651 25.873 487 259 17 6 418 781 1239 8.12e-29 119
Msa0419980 MtrunA17_Chr8g0336651 31.278 227 137 7 207 418 548 770 6.27e-22 99.0
Msa0419980 MtrunA17_Chr8g0336691 25.620 484 262 15 6 418 919 1375 1.09e-32 131
Msa0419980 MtrunA17_Chr8g0336691 24.532 481 281 14 1 418 8 469 2.33e-31 127
Msa0419980 MtrunA17_Chr8g0336691 26.233 446 279 15 6 418 480 908 1.97e-29 121
Msa0419980 MtrunA17_Chr5g0428081 26.427 473 286 13 9 424 14 481 1.11e-32 129
Msa0419980 MtrunA17_Chr7g0243801 26.380 489 275 18 3 422 4 476 1.16e-32 129
Msa0419980 MtrunA17_Chr4g0011051 26.210 496 290 18 1 427 4 492 1.19e-32 129
Msa0419980 MtrunA17_Chr4g0066261 26.050 476 286 15 9 424 14 483 2.36e-32 128
Msa0419980 MtrunA17_Chr8g0334861 25.314 478 284 17 1 421 1 462 4.66e-32 127
Msa0419980 MtrunA17_Chr7g0265051 25.253 495 289 15 2 426 5 488 5.16e-32 127
Msa0419980 MtrunA17_Chr8g0334851 25.105 474 290 14 1 418 1 465 5.46e-32 127
Msa0419980 MtrunA17_Chr1g0153451 26.539 471 281 16 1 418 1 459 5.94e-32 126
Msa0419980 MtrunA17_Chr7g0265141 31.868 273 135 6 202 423 214 486 5.97e-32 127
Msa0419980 MtrunA17_Chr6g0459311 27.158 475 274 18 1 418 8 467 7.38e-32 126
Msa0419980 MtrunA17_Chr7g0243861 24.390 492 279 14 6 422 14 487 8.16e-32 126
Msa0419980 MtrunA17_Chr7g0265101 25.407 492 294 15 2 426 5 490 1.01e-31 126
Msa0419980 MtrunA17_Chr6g0462521 30.070 286 159 7 174 418 161 446 1.04e-31 125
Msa0419980 MtrunA17_Chr8g0336731 27.789 475 259 19 8 419 34 487 1.66e-31 125
Msa0419980 MtrunA17_Chr3g0106231 25.910 467 265 17 6 423 18 452 1.68e-31 125
Msa0419980 MtrunA17_Chr5g0448551 23.310 429 274 10 3 390 4 418 2.34e-31 124
Msa0419980 MtrunA17_Chr6g0486251 26.514 479 258 20 1 411 1 453 3.42e-31 124
Msa0419980 MtrunA17_Chr6g0486201 26.514 479 258 20 1 411 1 453 3.42e-31 124
Msa0419980 MtrunA17_Chr7g0235051 24.375 480 261 14 6 421 11 452 6.80e-31 123
Msa0419980 MtrunA17_Chr3g0079731 31.228 285 137 9 183 411 189 470 7.57e-31 124
Msa0419980 MtrunA17_Chr2g0294931 25.051 487 301 14 1 428 6 487 8.78e-31 123
Msa0419980 MtrunA17_Chr4g0066281 25.726 482 264 16 9 424 15 468 1.17e-30 123
Msa0419980 MtrunA17_Chr8g0347271 27.155 464 262 17 5 411 18 462 1.52e-30 122
Msa0419980 MtrunA17_Chr8g0339461 29.276 304 166 9 166 422 170 471 1.69e-30 122
Msa0419980 MtrunA17_Chr8g0339601 28.990 307 169 10 151 410 14 318 3.66e-30 119
Msa0419980 MtrunA17_Chr8g0374931 25.625 480 283 16 9 424 14 483 5.15e-30 121
Msa0419980 MtrunA17_Chr5g0429711 24.845 483 283 14 1 426 6 465 5.18e-30 121
Msa0419980 MtrunA17_Chr8g0339451 27.778 396 229 12 71 411 59 452 6.02e-30 120
Msa0419980 MtrunA17_Chr7g0275511 27.292 469 275 16 5 418 14 471 6.69e-30 120
Msa0419980 MtrunA17_Chr4g0014061 27.291 491 259 22 2 419 4 469 7.89e-30 120
Msa0419980 MtrunA17_Chr2g0302961 26.625 477 282 19 4 424 3 467 1.04e-29 120
Msa0419980 MtrunA17_Chr7g0265151 24.291 494 294 17 3 426 4 487 1.10e-29 120
Msa0419980 MtrunA17_Chr3g0118741 83.051 59 10 0 1 59 1 59 1.23e-29 110
Msa0419980 MtrunA17_Chr4g0066151 25.265 471 281 13 7 419 19 476 1.42e-29 120
Msa0419980 MtrunA17_Chr8g0347281 26.087 460 272 15 5 411 17 461 1.51e-29 120
Msa0419980 MtrunA17_Chr5g0432731 29.457 258 137 6 203 423 48 297 1.71e-29 116
Msa0419980 MtrunA17_Chr5g0401851 24.330 485 284 16 8 422 12 483 2.85e-29 119
Msa0419980 MtrunA17_Chr3g0079711 36.364 176 92 5 256 411 3 178 5.42e-29 112
Msa0419980 MtrunA17_Chr5g0410941 25.519 482 293 15 1 424 18 491 9.36e-29 117
Msa0419980 MtrunA17_Chr2g0294921 25.470 479 285 16 9 424 163 632 1.70e-28 118
Msa0419980 MtrunA17_Chr8g0339441 36.264 182 97 4 249 411 237 418 2.04e-28 116
Msa0419980 MtrunA17_Chr7g0243761 23.567 471 279 14 6 422 11 454 3.06e-28 116
Msa0419980 MtrunA17_Chr6g0463861 24.280 486 298 15 1 428 6 479 4.88e-28 115
Msa0419980 MtrunA17_Chr4g0066171 25.403 496 271 17 1 426 16 482 6.31e-28 115
Msa0419980 MtrunA17_Chr4g0066131 24.131 489 274 14 7 424 14 476 7.03e-28 115
Msa0419980 MtrunA17_Chr8g0339631 26.700 397 229 15 71 411 67 457 1.05e-27 114
Msa0419980 MtrunA17_Chr6g0453981 35.263 190 89 5 148 304 43 231 2.25e-27 108
Msa0419980 MtrunA17_Chr5g0403641 31.818 198 114 4 249 425 308 505 2.66e-27 114
Msa0419980 MtrunA17_Chr4g0044481 25.424 413 217 15 6 366 27 400 3.37e-27 112
Msa0419980 MtrunA17_Chr8g0374971 26.025 488 269 16 9 424 15 482 4.78e-27 112
Msa0419980 MtrunA17_Chr1g0165701 25.051 491 270 17 7 422 16 483 5.91e-27 112
Msa0419980 MtrunA17_Chr5g0429681 26.556 482 281 20 1 426 39 503 6.88e-27 112
Msa0419980 MtrunA17_Chr7g0265111 33.684 190 109 4 251 423 327 516 8.03e-27 112
Msa0419980 MtrunA17_Chr8g0361371 25.514 486 273 19 2 419 3 467 9.32e-27 112
Msa0419980 MtrunA17_Chr2g0329111 25.099 506 276 20 1 426 1 483 2.21e-26 110
Msa0419980 MtrunA17_Chr6g0463851 23.387 496 283 16 9 428 14 488 2.23e-26 110
Msa0419980 MtrunA17_Chr7g0218311 25.420 476 282 15 9 422 19 483 2.72e-26 110
Msa0419980 MtrunA17_Chr7g0241801 26.852 432 244 18 3 396 6 403 8.63e-26 108
Msa0419980 MtrunA17_Chr8g0374941 24.303 502 264 16 10 427 953 1422 9.26e-26 110
Msa0419980 MtrunA17_Chr8g0374941 23.542 480 255 17 10 407 480 929 1.28e-21 98.2
Msa0419980 MtrunA17_Chr8g0374941 23.382 479 251 17 10 404 15 461 3.94e-20 93.6
Msa0419980 MtrunA17_Chr5g0427561 51.136 88 43 0 340 427 2 89 1.38e-25 99.8
Msa0419980 MtrunA17_Chr8g0370941 23.554 484 280 16 6 412 8 478 2.30e-25 108
Msa0419980 MtrunA17_Chr2g0302991 27.835 291 165 8 177 424 176 464 5.16e-25 106
Msa0419980 MtrunA17_Chr8g0374901 25.709 494 261 19 9 424 15 480 2.00e-24 105
Msa0419980 MtrunA17_Chr1g0153461 34.409 186 106 4 249 418 23 208 2.15e-24 100
Msa0419980 MtrunA17_Chr5g0420801 24.786 468 287 18 2 419 3 455 2.17e-24 105
Msa0419980 MtrunA17_Chr3g0106251 28.344 314 161 13 149 423 6 294 2.21e-24 102
Msa0419980 MtrunA17_Chr7g0243711 32.609 184 106 5 256 422 134 316 2.66e-24 102
Msa0419980 MtrunA17_Chr5g0416821 23.789 475 301 16 7 428 15 481 3.97e-24 104
Msa0419980 MtrunA17_Chr6g0463891 24.025 487 292 18 7 425 13 489 4.03e-24 104
Msa0419980 MtrunA17_Chr8g0382021 31.016 187 113 4 254 424 304 490 5.33e-24 103
Msa0419980 MtrunA17_Chr8g0334831 25.684 475 244 21 1 393 1 448 5.82e-24 103
Msa0419980 MtrunA17_Chr8g0355221 34.426 183 104 4 256 422 304 486 6.45e-24 103
Msa0419980 MtrunA17_Chr8g0350881 24.048 499 275 15 7 427 13 485 1.11e-23 103
Msa0419980 MtrunA17_Chr4g0042891 29.961 257 133 9 207 421 213 464 2.20e-23 102
Msa0419980 MtrunA17_Chr4g0042931 24.477 478 281 20 2 419 3 460 5.88e-23 100
Msa0419980 MtrunA17_Chr5g0416741 21.784 482 299 12 7 422 14 483 7.70e-23 100
Msa0419980 MtrunA17_Chr6g0454391 64.062 64 23 0 315 378 11 74 8.44e-23 93.2
Msa0419980 MtrunA17_Chr8g0337381 43.443 122 61 3 302 418 3 121 1.10e-22 93.2
Msa0419980 MtrunA17_Chr4g0044521 25.370 473 274 22 7 419 10 463 1.53e-22 99.8
Msa0419980 MtrunA17_Chr8g0361411 24.416 471 281 17 4 422 6 453 1.14e-21 97.1
Msa0419980 MtrunA17_Chr7g0241781 26.790 433 243 22 3 396 6 403 3.57e-21 95.1
Msa0419980 MtrunA17_Chr1g0196851 24.283 453 265 19 2 398 45 475 5.23e-21 95.1
Msa0419980 MtrunA17_Chr8g0369341 24.897 486 285 19 2 425 3 470 5.73e-21 95.1
Msa0419980 MtrunA17_Chr7g0243911 33.974 156 85 5 256 394 48 202 9.62e-21 90.5
Msa0419980 MtrunA17_Chr2g0307961 25.103 486 269 16 5 423 12 469 1.74e-20 93.6
Msa0419980 MtrunA17_Chr6g0482061 23.457 486 284 14 6 421 11 478 2.34e-20 93.2
Msa0419980 MtrunA17_Chr5g0431431 23.762 404 207 11 6 378 10 343 2.66e-20 91.7
Msa0419980 MtrunA17_Chr6g0454111 38.938 113 67 2 150 261 27 138 3.20e-20 87.8
Msa0419980 MtrunA17_Chr7g0232351 26.633 398 214 17 1 340 1 378 6.53e-20 90.9
Msa0419980 MtrunA17_Chr8g0367221 24.832 447 248 15 6 388 798 1220 1.84e-19 91.7
Msa0419980 MtrunA17_Chr8g0367221 23.146 445 280 16 6 399 1288 1721 1.65e-17 85.5
Msa0419980 MtrunA17_Chr8g0367221 31.783 129 81 4 251 375 290 415 3.07e-13 72.0
Msa0419980 MtrunA17_Chr7g0243811 24.265 408 226 15 18 369 1 381 2.69e-19 89.4
Msa0419980 MtrunA17_Chr4g0066141 35.000 160 85 5 288 428 200 359 4.15e-19 88.2
Msa0419980 MtrunA17_Chr7g0243611 34.752 141 75 4 251 375 157 296 4.88e-19 87.0
Msa0419980 MtrunA17_Chr2g0294941 23.704 270 152 8 189 404 92 361 4.57e-18 85.5
Msa0419980 MtrunA17_Chr4g0040691 23.077 481 285 18 6 427 8 462 1.34e-17 84.7
Msa0419980 MtrunA17_Chr6g0466841 25.879 398 244 15 6 365 18 402 1.67e-17 84.3
Msa0419980 MtrunA17_Chr6g0466831 23.529 476 285 16 6 427 18 468 2.10e-17 84.0
Msa0419980 MtrunA17_Chr5g0409591 30.323 155 86 4 259 394 304 455 1.26e-16 81.6
Msa0419980 MtrunA17_Chr2g0278721 35.526 152 88 5 251 396 804 951 2.23e-16 81.6
Msa0419980 MtrunA17_Chr4g0029131 29.114 158 100 4 253 398 278 435 3.84e-16 80.9
Msa0419980 MtrunA17_Chr2g0302851 24.000 450 284 15 6 414 16 448 1.06e-15 79.0
Msa0419980 MtrunA17_Chr8g0336321 32.895 152 94 5 251 396 290 439 2.78e-15 77.8
Msa0419980 MtrunA17_Chr8g0336251 31.788 151 97 3 251 396 290 439 4.02e-15 77.0
Msa0419980 MtrunA17_Chr6g0454381 37.113 97 61 0 148 244 43 139 5.59e-15 72.0
Msa0419980 MtrunA17_Chr5g0427571 33.113 151 95 5 251 396 124 273 2.14e-14 73.6
Msa0419980 MtrunA17_Chr4g0029151 29.114 158 100 4 253 398 286 443 7.17e-14 73.2
Msa0419980 MtrunA17_Chr2g0283041 26.797 153 104 3 253 397 279 431 1.37e-13 72.4
Msa0419980 MtrunA17_Chr4g0069611 27.717 184 115 6 251 426 288 461 3.13e-13 71.2
Msa0419980 MtrunA17_Chr3g0092031 33.621 116 72 3 251 365 25 136 1.10e-12 66.6
Msa0419980 MtrunA17_Chr4g0040711 31.818 110 74 1 257 365 286 395 1.25e-12 69.3
Msa0419980 MtrunA17_Chr7g0243731 41.176 68 39 1 299 365 6 73 1.62e-12 62.8
Msa0419980 MtrunA17_Chr8g0357361 30.435 115 76 3 254 367 142 253 1.27e-11 64.7
Msa0419980 MtrunA17_Chr2g0319791 27.465 142 94 4 267 399 294 435 2.02e-11 65.5
Msa0419980 MtrunA17_Chr7g0267931 67.568 37 11 1 11 46 25 61 2.12e-11 59.3
Msa0419980 MtrunA17_Chr2g0319761 30.000 140 89 4 269 399 296 435 8.46e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0419980 AT1G22380.1 45.992 474 203 7 2 423 9 481 4.03e-146 425
Msa0419980 AT1G22360.1 44.820 473 208 7 3 423 7 478 3.99e-143 417
Msa0419980 AT1G22400.1 43.671 474 213 7 3 423 10 482 7.12e-142 414
Msa0419980 AT1G22340.1 43.067 476 219 6 3 426 10 485 1.28e-141 414
Msa0419980 AT1G22370.2 46.055 469 203 8 3 423 10 476 1.29e-139 408
Msa0419980 AT1G22360.2 43.340 473 203 8 3 423 7 466 1.97e-134 394
Msa0419980 AT1G78270.1 42.887 478 220 9 3 428 10 486 5.00e-128 379
Msa0419980 AT1G22370.1 44.408 304 132 5 156 423 4 306 1.18e-80 251
Msa0419980 AT5G59590.1 32.823 457 250 14 3 419 7 446 3.87e-66 218
Msa0419980 AT3G46660.1 32.104 461 257 14 1 419 6 452 2.40e-64 214
Msa0419980 AT5G59580.1 32.599 454 252 14 4 419 7 444 6.39e-64 213
Msa0419980 AT3G11340.1 31.102 463 256 13 2 423 5 445 6.75e-64 212
Msa0419980 AT3G46650.1 32.584 445 252 13 1 418 5 428 6.37e-63 209
Msa0419980 AT2G36970.1 28.632 468 282 11 3 422 7 470 8.15e-63 211
Msa0419980 AT3G46670.1 31.466 464 254 15 1 419 1 445 4.54e-62 207
Msa0419980 AT3G46690.1 33.478 460 244 14 3 419 6 446 5.99e-62 207
Msa0419980 AT5G38040.1 32.450 453 235 14 14 419 18 446 2.58e-61 206
Msa0419980 AT3G21560.1 30.407 467 271 13 5 422 11 472 1.62e-60 204
Msa0419980 AT5G38010.1 31.398 465 252 13 2 419 6 450 5.25e-60 202
Msa0419980 AT3G46680.1 31.670 461 255 15 1 419 4 446 1.02e-58 199
Msa0419980 AT2G28080.1 29.590 463 265 12 10 423 22 472 1.37e-55 191
Msa0419980 AT3G46700.1 30.549 455 259 14 3 419 6 441 6.03e-54 186
Msa0419980 AT4G15500.1 27.137 468 280 9 5 423 8 463 4.52e-53 184
Msa0419980 AT3G46720.1 31.195 452 256 14 3 419 6 437 5.84e-52 181
Msa0419980 AT3G55710.1 29.536 474 260 16 6 427 8 459 9.96e-52 181
Msa0419980 AT3G55700.1 28.387 465 273 14 6 427 8 455 1.35e-51 180
Msa0419980 AT4G15480.1 27.975 479 264 14 6 422 19 478 2.17e-51 180
Msa0419980 AT5G05880.1 28.791 455 266 11 6 419 8 445 7.20e-51 178
Msa0419980 AT5G05890.1 28.571 462 262 12 6 419 8 449 1.25e-50 177
Msa0419980 AT4G15490.1 27.813 471 276 12 6 423 8 467 6.79e-50 176
Msa0419980 AT2G43840.2 27.609 460 274 12 4 422 5 446 1.53e-49 174
Msa0419980 AT2G43840.1 26.681 461 277 13 4 422 5 446 5.21e-49 173
Msa0419980 AT2G31790.1 28.936 470 262 14 3 420 5 454 2.10e-48 171
Msa0419980 AT2G43820.1 27.586 464 271 14 3 422 4 446 5.59e-48 170
Msa0419980 AT5G05870.1 27.174 460 279 10 6 422 8 454 1.96e-47 169
Msa0419980 AT5G05860.1 28.571 455 273 14 6 423 9 448 3.67e-47 168
Msa0419980 AT2G31750.1 28.145 469 271 15 4 424 6 456 3.84e-47 168
Msa0419980 AT2G31750.2 28.145 469 271 15 4 424 6 456 1.03e-46 167
Msa0419980 AT5G05900.1 26.957 460 267 12 6 419 8 444 1.14e-46 167
Msa0419980 AT1G24100.1 27.991 468 264 12 4 419 9 455 7.83e-46 165
Msa0419980 AT3G02100.1 27.079 469 266 17 4 419 11 456 2.84e-45 163
Msa0419980 AT5G17050.1 26.638 458 284 11 6 423 12 457 3.30e-43 157
Msa0419980 AT2G26480.1 28.078 463 270 16 3 423 5 446 2.17e-42 155
Msa0419980 AT5G17040.2 28.981 314 185 4 141 424 34 339 7.88e-42 151
Msa0419980 AT2G30140.1 28.541 473 258 18 2 425 9 450 1.38e-41 153
Msa0419980 AT2G23250.1 26.247 461 255 19 15 422 7 435 2.41e-41 152
Msa0419980 AT2G30140.2 28.178 472 260 18 2 425 9 449 5.66e-41 151
Msa0419980 AT1G05560.1 25.161 465 284 14 5 422 4 451 4.80e-40 149
Msa0419980 AT5G26310.1 26.804 485 271 18 4 424 5 469 6.80e-40 149
Msa0419980 AT1G05560.2 25.161 465 284 14 5 422 54 501 7.10e-40 149
Msa0419980 AT4G14090.1 28.051 467 266 18 3 421 10 454 8.39e-40 148
Msa0419980 AT1G05680.1 31.338 284 150 5 176 420 173 450 8.84e-40 148
Msa0419980 AT4G01070.1 26.059 472 266 16 3 411 5 456 3.14e-39 147
Msa0419980 AT4G15550.1 26.752 471 281 14 5 421 12 472 3.33e-39 147
Msa0419980 AT1G05675.1 30.634 284 152 5 176 420 173 450 1.34e-38 145
Msa0419980 AT2G36780.1 26.423 492 274 17 6 424 14 490 2.25e-38 145
Msa0419980 AT5G17040.1 24.190 463 281 11 6 424 5 441 4.47e-38 143
Msa0419980 AT2G36750.1 26.392 485 282 13 6 424 10 485 1.55e-37 142
Msa0419980 AT1G30530.1 25.163 461 283 11 6 424 12 452 2.68e-37 141
Msa0419980 AT2G23260.1 26.395 466 278 17 3 422 7 453 9.21e-37 140
Msa0419980 AT2G36800.1 26.775 493 270 17 6 423 12 488 1.10e-36 140
Msa0419980 AT1G10400.1 28.333 480 261 19 3 421 4 461 1.13e-36 140
Msa0419980 AT2G36770.1 26.061 495 274 18 6 425 14 491 1.93e-36 140
Msa0419980 AT1G01420.1 26.824 466 249 16 5 403 7 447 9.43e-36 137
Msa0419980 AT2G30150.2 26.695 472 263 17 6 424 13 454 9.44e-36 137
Msa0419980 AT1G01420.2 26.824 466 249 16 5 403 10 450 9.81e-36 137
Msa0419980 AT5G66690.1 25.625 480 283 17 4 424 5 469 2.31e-35 136
Msa0419980 AT5G17030.1 26.871 294 179 4 159 423 170 456 5.18e-35 135
Msa0419980 AT1G05530.1 25.159 473 273 15 4 419 3 451 9.96e-35 134
Msa0419980 AT3G53160.1 25.249 503 272 15 6 427 8 487 3.80e-34 133
Msa0419980 AT2G30150.1 26.282 468 262 17 10 424 1 438 6.74e-34 132
Msa0419980 AT4G34131.1 26.349 482 282 15 3 421 7 478 7.09e-34 132
Msa0419980 AT2G15480.1 24.748 497 278 13 1 422 5 480 2.58e-33 131
Msa0419980 AT5G14860.1 25.549 501 260 18 6 424 8 477 1.36e-32 129
Msa0419980 AT2G36790.1 24.187 492 285 14 6 424 13 489 2.91e-32 128
Msa0419980 AT3G50740.1 27.088 491 262 22 4 421 5 472 3.25e-32 128
Msa0419980 AT2G15480.2 24.458 507 277 14 1 422 5 490 8.30e-32 127
Msa0419980 AT1G01390.1 26.446 484 275 15 5 426 7 471 1.08e-31 126
Msa0419980 AT1G01390.2 26.446 484 275 15 5 426 24 488 1.82e-31 126
Msa0419980 AT2G18560.1 30.634 284 141 11 185 415 89 369 3.38e-31 123
Msa0419980 AT2G18570.1 29.930 284 143 11 185 415 179 459 3.68e-31 124
Msa0419980 AT3G21750.1 25.259 483 283 15 4 423 2 469 6.40e-31 124
Msa0419980 AT4G34135.1 25.873 487 279 13 3 421 8 480 2.37e-30 122
Msa0419980 AT3G16520.3 31.142 289 159 10 166 419 173 456 3.46e-30 122
Msa0419980 AT2G16890.2 24.948 481 285 18 6 427 9 472 4.66e-30 121
Msa0419980 AT4G36770.1 36.810 163 86 3 259 404 283 445 1.95e-29 119
Msa0419980 AT4G34138.1 26.176 489 272 18 4 422 9 478 3.31e-29 119
Msa0419980 AT5G37950.2 28.997 369 181 15 21 340 1 337 7.22e-29 116
Msa0419980 AT5G03490.1 26.282 468 274 17 3 421 16 461 7.25e-29 118
Msa0419980 AT2G15490.3 29.231 260 143 5 204 422 218 477 1.27e-28 117
Msa0419980 AT3G21790.1 26.139 505 265 19 4 425 2 481 2.65e-28 117
Msa0419980 AT3G16520.2 31.022 274 149 10 166 404 173 441 3.18e-28 116
Msa0419980 AT3G16520.1 31.022 274 149 10 166 404 173 441 3.77e-28 115
Msa0419980 AT3G53150.1 23.664 524 269 15 3 425 19 512 3.96e-28 116
Msa0419980 AT5G37950.1 29.223 373 181 16 21 340 1 343 4.16e-28 114
Msa0419980 AT2G15490.1 29.278 263 142 6 204 422 218 480 1.09e-27 115
Msa0419980 AT2G29730.1 33.333 174 106 3 257 423 293 463 1.42e-26 111
Msa0419980 AT2G36760.1 28.782 271 144 8 204 425 221 491 1.74e-26 111
Msa0419980 AT2G29710.1 32.759 174 108 3 257 423 292 463 2.40e-26 110
Msa0419980 AT1G07250.1 30.233 258 141 7 207 427 222 477 2.00e-25 108
Msa0419980 AT3G21760.1 26.059 307 168 9 170 425 185 483 3.69e-25 107
Msa0419980 AT5G12890.1 24.048 499 272 18 6 423 10 482 1.47e-24 105
Msa0419980 AT4G15260.1 26.335 281 155 7 193 425 81 357 1.10e-22 99.0
Msa0419980 AT2G16890.3 25.408 429 243 19 6 375 9 419 1.71e-22 99.4
Msa0419980 AT1G51210.1 23.666 431 274 11 4 396 18 431 1.76e-22 99.4
Msa0419980 AT3G21780.1 24.138 493 274 19 4 422 2 468 1.77e-22 99.8
Msa0419980 AT2G29740.1 28.846 260 143 8 198 419 216 471 2.28e-22 99.4
Msa0419980 AT3G21800.1 27.985 268 142 7 207 425 213 478 2.54e-22 99.4
Msa0419980 AT1G07260.1 31.638 177 110 3 256 423 298 472 2.60e-22 99.4
Msa0419980 AT2G29750.1 31.868 182 112 4 256 428 301 479 4.07e-22 99.0
Msa0419980 AT1G73880.1 24.000 475 287 17 4 423 12 467 8.83e-22 97.8
Msa0419980 AT4G15280.1 28.364 275 145 10 200 425 205 476 1.20e-21 97.4
Msa0419980 AT4G15280.2 28.364 275 145 10 200 425 237 508 1.36e-21 97.4
Msa0419980 AT1G07240.1 27.132 258 145 7 207 423 221 476 1.79e-21 97.1
Msa0419980 AT3G22250.1 28.636 220 125 9 199 407 253 451 2.55e-19 90.1
Msa0419980 AT1G06000.1 22.803 478 260 20 3 422 7 433 4.84e-19 89.4
Msa0419980 AT5G53990.1 25.432 405 247 13 1 373 1 382 1.49e-17 84.7
Msa0419980 AT2G22590.1 24.490 441 282 14 4 399 13 447 1.78e-17 84.7
Msa0419980 AT5G49690.1 31.818 154 89 5 249 394 282 427 1.14e-16 82.4
Msa0419980 AT5G65550.1 29.545 176 103 5 253 415 291 458 7.47e-16 79.7
Msa0419980 AT1G64910.1 38.655 119 68 2 256 373 268 382 7.70e-16 79.7
Msa0419980 AT3G29630.2 24.069 403 235 14 1 375 1 360 6.27e-15 76.6
Msa0419980 AT4G27570.1 23.583 441 271 15 4 399 5 424 1.72e-14 75.5
Msa0419980 AT4G09500.2 22.693 401 257 10 1 368 1 381 2.02e-14 75.1
Msa0419980 AT2G22930.1 22.921 445 282 12 1 408 1 421 2.87e-14 74.7
Msa0419980 AT3G29630.1 24.138 406 257 16 1 375 1 386 4.20e-14 74.3
Msa0419980 AT4G27560.1 23.462 439 272 15 4 398 5 423 6.27e-14 73.9
Msa0419980 AT5G54010.1 31.544 149 96 3 256 403 274 417 1.08e-13 73.2
Msa0419980 AT5G54060.1 24.297 391 243 15 7 355 14 393 1.39e-13 72.8
Msa0419980 AT4G09500.1 30.702 114 78 1 256 368 243 356 1.25e-12 69.7
Msa0419980 AT1G64920.1 30.065 153 97 4 256 403 268 415 1.83e-11 66.2

Find 84 sgRNAs with CRISPR-Local

Find 261 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CACGCACCATTCAAAGAATT+TGG 0.116902 3_2:+68255435 None:intergenic
TAATGCAAATAACTGGAATA+TGG 0.238009 3_2:+68256795 None:intergenic
TGATATTATGTTTGATTTCA+TGG 0.260029 3_2:-68254096 Msa0419980:CDS
GAGTTTAGCTAGTTGCATTA+AGG 0.273197 3_2:+68257063 None:intergenic
GTGGAAGAATAAAGCTAAAA+AGG 0.281172 3_2:-68253402 Msa0419980:CDS
TGGTAGAAACTTTCCCAAAA+AGG 0.284142 3_2:-68253940 Msa0419980:CDS
GAACCTCTGCAATTAACTTA+TGG 0.297571 3_2:+68253345 None:intergenic
GAAATGATGAAAGGAGAAAA+AGG 0.299967 3_2:-68253452 Msa0419980:CDS
CAAATACAACATGTGGCTTT+TGG 0.306232 3_2:+68257116 None:intergenic
AGTTTAGCTAGTTGCATTAA+GGG 0.308055 3_2:+68257064 None:intergenic
TGTGTTGCATCCTTATTAAA+AGG 0.315593 3_2:+68256905 None:intergenic
GGACCAATGCTATATATGTT+AGG 0.322362 3_2:+68253975 None:intergenic
ATAGTAAGTTACCATTTCTA+TGG 0.327175 3_2:-68253793 Msa0419980:CDS
TGCTTGCTCATCCATCAGTT+GGG 0.338073 3_2:-68253658 Msa0419980:CDS
ACAATTGAAACCATTTCTTC+AGG 0.342589 3_2:-68253605 Msa0419980:CDS
CTGAGCAACAAACAAATTGT+AGG 0.353752 3_2:-68253553 Msa0419980:CDS
CTAGATGAAGTTAAGGATAG+AGG 0.360667 3_2:-68253713 Msa0419980:CDS
CAGGTGTTCCTACTATTTGT+TGG 0.370743 3_2:-68253586 Msa0419980:CDS
TCAGCAATAATGCAAATAAC+TGG 0.372647 3_2:+68256788 None:intergenic
CCTTGGAAACAAGTTTAGAT+TGG 0.385572 3_2:-68254184 Msa0419980:CDS
TCTTCACCCATTACTACATC+TGG 0.391769 3_2:+68253761 None:intergenic
AATGCAAATAACTGGAATAT+GGG 0.393531 3_2:+68256796 None:intergenic
TTGTTCCCAAATTCTTTGAA+TGG 0.393993 3_2:-68255441 Msa0419980:intron
ACGCACCATTCAAAGAATTT+GGG 0.412291 3_2:+68255436 None:intergenic
AAACGTTTGGTAAACTCTCT+TGG 0.416123 3_2:-68256989 Msa0419980:CDS
AGTAGGAACACCTGAAGAAA+TGG 0.419675 3_2:+68253595 None:intergenic
ACAAGTTTAGATTGGATCTC+AGG 0.425213 3_2:-68254176 Msa0419980:CDS
TGAATTCAACCACAAACGTT+TGG 0.432420 3_2:-68257002 Msa0419980:CDS
GTTATTTGCATTATTGCTGA+TGG 0.445390 3_2:-68256785 Msa0419980:CDS
TTATGCAACACTTGGAAAGT+AGG 0.445886 3_2:-68253527 Msa0419980:CDS
GGTCTCATTATCCATAGAAA+TGG 0.450610 3_2:+68253782 None:intergenic
GACCAATGCTATATATGTTA+GGG 0.451958 3_2:+68253976 None:intergenic
GAGAGTTTACCAAACGTTTG+TGG 0.461278 3_2:+68256993 None:intergenic
CAACGTTGTGTGACGCAACT+AGG 0.464523 3_2:-68256874 Msa0419980:CDS
GTTTGTTGCTCAGCAAAGAA+TGG 0.468607 3_2:+68253563 None:intergenic
ATGAGACCAGATGTAGTAAT+GGG 0.468666 3_2:-68253767 Msa0419980:CDS
CAGTGTTCACAAAGGTTATG+TGG 0.477175 3_2:+68257023 None:intergenic
GATATTATGTTTGATTTCAT+GGG 0.477236 3_2:-68254095 Msa0419980:CDS
GTGCTTGCTCATCCATCAGT+TGG 0.479121 3_2:-68253659 Msa0419980:CDS
AAGAATGGCCAACAAATAGT+AGG 0.483470 3_2:+68253578 None:intergenic
GGATTAACATGACCCTGTGC+TGG 0.486919 3_2:+68257085 None:intergenic
CCCATGCAAATTCTTTCAAG+TGG 0.489947 3_2:+68253825 None:intergenic
TTAAAAGGAGGCAAACCATC+AGG 0.490555 3_2:+68256920 None:intergenic
CCAATCTAAACTTGTTTCCA+AGG 0.491889 3_2:+68254184 None:intergenic
TCAGTAACTCTCATGAAGCT+TGG 0.497499 3_2:+68254125 None:intergenic
ACCACTTGAAAGAATTTGCA+TGG 0.503004 3_2:-68253826 Msa0419980:CDS
GTTTGATTTCATGGGTTCTG+AGG 0.504410 3_2:-68254087 Msa0419980:CDS
CTGATGGATGAGCAAGCACT+TGG 0.515271 3_2:+68253663 None:intergenic
AACCCTAACATATATAGCAT+TGG 0.520257 3_2:-68253978 Msa0419980:CDS
ATTGGTCCACTTCACATGCT+TGG 0.521488 3_2:-68253960 Msa0419980:CDS
CTTGGACAAGACTATATGAA+TGG 0.526788 3_2:-68256971 Msa0419980:CDS
CAACACTTGGAAAGTAGGAA+TGG 0.527532 3_2:-68253522 Msa0419980:CDS
GCTTGCTCATCCATCAGTTG+GGG 0.531389 3_2:-68253657 Msa0419980:CDS
ATGAAGTGCTTGCCACCCTT+AGG 0.533527 3_2:-68254007 Msa0419980:CDS
GAATTTGGGAACAAAGATGA+TGG 0.535271 3_2:+68255450 None:intergenic
AATGAGACCAGATGTAGTAA+TGG 0.544388 3_2:-68253768 Msa0419980:CDS
TAACAATGATGTTAAAAGAG+AGG 0.548799 3_2:-68253495 Msa0419980:CDS
GGGAACAAAGATGATGGAGA+AGG 0.552873 3_2:+68255456 None:intergenic
TAACTCTCATGAAGCTTGGA+AGG 0.558068 3_2:+68254129 None:intergenic
CCACTTGAAAGAATTTGCAT+GGG 0.559901 3_2:-68253825 Msa0419980:CDS
GTAGGTATTTATGCAACACT+TGG 0.560031 3_2:-68253535 Msa0419980:CDS
AGGAGGCAAACCATCAGGTA+TGG 0.561833 3_2:+68256925 None:intergenic
TTTCCATAAGTTAATTGCAG+AGG 0.567285 3_2:-68253348 Msa0419980:CDS
CAATTTGAGACCATACCTGA+TGG 0.571463 3_2:-68256935 Msa0419980:CDS
GATTAACATGACCCTGTGCT+GGG 0.576256 3_2:+68257086 None:intergenic
ACATGACCCTGTGCTGGGTA+TGG 0.576356 3_2:+68257091 None:intergenic
AAAGATGATGGAGAAGGAGA+AGG 0.578391 3_2:+68255462 None:intergenic
ATTTGTACCATACCCAGCAC+AGG 0.579646 3_2:-68257098 Msa0419980:CDS
GCTAAACTCCTACGTTGCAA+AGG 0.584360 3_2:-68257049 Msa0419980:CDS
GTTGCATCCTTATTAAAAGG+AGG 0.587999 3_2:+68256908 None:intergenic
CTTGTACTAGAAATGATGAA+AGG 0.598189 3_2:-68253461 Msa0419980:CDS
TTATTGATAAGCTCTTTGAA+AGG 0.600734 3_2:+68256836 None:intergenic
TTTCTACCAAGCATGTGAAG+TGG 0.601192 3_2:+68253954 None:intergenic
ATAGAGGATACATAACAAGT+TGG 0.603705 3_2:-68253697 Msa0419980:CDS
ATGCAAATAACTGGAATATG+GGG 0.612181 3_2:+68256797 None:intergenic
TGTGGAAACCTTTGCAACGT+AGG 0.614223 3_2:+68257041 None:intergenic
GATGATGGAGAAGGAGAAGG+TGG 0.618404 3_2:+68255465 None:intergenic
TATGGTACAAATACAACATG+TGG 0.623529 3_2:+68257109 None:intergenic
ACTTCATCTAGAAAATCTTG+TGG 0.626314 3_2:+68253725 None:intergenic
TGAAACAAAAGAGCTTAGAG+TGG 0.637723 3_2:-68253421 Msa0419980:CDS
CTAGTTGCGTCACACAACGT+TGG 0.639632 3_2:+68256875 None:intergenic
CACTTGAAAGAATTTGCATG+GGG 0.652156 3_2:-68253824 Msa0419980:CDS
GTTGAATTCAGTGTTCACAA+AGG 0.652579 3_2:+68257015 None:intergenic
TTTGTACCATACCCAGCACA+GGG 0.724103 3_2:-68257097 Msa0419980:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTATTTTATAAACTTTTG+TGG - chr3_2:68253898-68253917 Msa0419980:intron 10.0%
!!! TACAATTTATATATTTTGTT+GGG + chr3_2:68253991-68254010 None:intergenic 10.0%
!!! TTACAATTTATATATTTTGT+TGG + chr3_2:68253992-68254011 None:intergenic 10.0%
!!! ATTATAATTTGTTTTTTTAG+AGG - chr3_2:68254106-68254125 Msa0419980:CDS 10.0%
!! GTATAAAAAAAAATTGATAT+TGG + chr3_2:68254357-68254376 None:intergenic 10.0%
!!! TTTTTAATTTAAAATATGCA+CGG - chr3_2:68254792-68254811 Msa0419980:intron 10.0%
!! CAAAAAAAAATTACAAAAAT+TGG - chr3_2:68255699-68255718 Msa0419980:intron 10.0%
!! AAAAAAAATTACAAAAATTG+GGG - chr3_2:68255701-68255720 Msa0419980:intron 10.0%
!! ATTGTTAAAAGTTAAGAAAT+GGG - chr3_2:68254817-68254836 Msa0419980:intron 15.0%
!! ATAATTTAGGTATGATAAAA+TGG + chr3_2:68255408-68255427 None:intergenic 15.0%
!!! TGTAATTTTTTTTTGTTTAG+TGG + chr3_2:68255694-68255713 None:intergenic 15.0%
!! AAAAAAATTACAAAAATTGG+GGG - chr3_2:68255702-68255721 Msa0419980:intron 15.0%
!! TATTTACTTGTAATTACTTT+GGG + chr3_2:68255740-68255759 None:intergenic 15.0%
!! ATATTTACTTGTAATTACTT+TGG + chr3_2:68255741-68255760 None:intergenic 15.0%
!! TTACAAGTAAATATATAGTT+TGG - chr3_2:68255747-68255766 Msa0419980:intron 15.0%
!! TAATGTCATCTAAAAATTTA+GGG + chr3_2:68256158-68256177 None:intergenic 15.0%
!! ATAATGTCATCTAAAAATTT+AGG + chr3_2:68256159-68256178 None:intergenic 15.0%
!!! AATTTTTAGATGACATTATT+TGG - chr3_2:68256160-68256179 Msa0419980:intron 15.0%
!!! ATTGATTTGACGTATTTATT+TGG + chr3_2:68253824-68253843 None:intergenic 20.0%
!!! TATGGTATGTGATTTTTTTT+TGG + chr3_2:68253851-68253870 None:intergenic 20.0%
!!! TTTTATAAACTTTTGTGGAA+AGG - chr3_2:68253903-68253922 Msa0419980:intron 20.0%
!!! TTTATATATTTTGTTGGGTT+TGG + chr3_2:68253986-68254005 None:intergenic 20.0%
!!! CTTTTTAAGGTGAATAAATA+GGG + chr3_2:68254294-68254313 None:intergenic 20.0%
!!! TCTTTTTAAGGTGAATAAAT+AGG + chr3_2:68254295-68254314 None:intergenic 20.0%
!!! GTTAGAAATCAATCTTTTTA+AGG + chr3_2:68254307-68254326 None:intergenic 20.0%
!! TTAACTACGTTTAATCAAAT+TGG - chr3_2:68254398-68254417 Msa0419980:intron 20.0%
!! AATTGAAACCAAAATATAGA+AGG - chr3_2:68254557-68254576 Msa0419980:intron 20.0%
!!! TAAAGTTTCCTTCTATATTT+TGG + chr3_2:68254568-68254587 None:intergenic 20.0%
!! CATTGTTAAAAGTTAAGAAA+TGG - chr3_2:68254816-68254835 Msa0419980:intron 20.0%
!! TTGTTAAAAGTTAAGAAATG+GGG - chr3_2:68254818-68254837 Msa0419980:intron 20.0%
!! AAATATGTAGCACAAAAATA+TGG + chr3_2:68255061-68255080 None:intergenic 20.0%
!!! AGTTTAATTTGAACAAAACT+AGG - chr3_2:68255218-68255237 Msa0419980:intron 20.0%
!!! ACTTCATATTTGACATTTTT+CGG + chr3_2:68255268-68255287 None:intergenic 20.0%
!! ATAATTCTATCGTGATAAAA+TGG - chr3_2:68255307-68255326 Msa0419980:intron 20.0%
!! TAATTCTATCGTGATAAAAT+GGG - chr3_2:68255308-68255327 Msa0419980:intron 20.0%
!! AAACAAGTGGTATATAATTT+AGG + chr3_2:68255421-68255440 None:intergenic 20.0%
!!! ATAATCTTTTAAATGCACAT+TGG + chr3_2:68255827-68255846 None:intergenic 20.0%
!!! TGATATTATGTTTGATTTCA+TGG - chr3_2:68256350-68256369 Msa0419980:intron 20.0%
!!! GATATTATGTTTGATTTCAT+GGG - chr3_2:68256351-68256370 Msa0419980:intron 20.0%
! TTATTGATAAGCTCTTTGAA+AGG + chr3_2:68253613-68253632 None:intergenic 25.0%
! AATGCAAATAACTGGAATAT+GGG + chr3_2:68253653-68253672 None:intergenic 25.0%
! TAATGCAAATAACTGGAATA+TGG + chr3_2:68253654-68253673 None:intergenic 25.0%
! TATAAAAAGATGCAATGAAG+AGG + chr3_2:68253783-68253802 None:intergenic 25.0%
!!! GTATGTGATTTTTTTTTGGT+TGG + chr3_2:68253847-68253866 None:intergenic 25.0%
! ATCAATTGAGTTATACTCAT+TGG + chr3_2:68254225-68254244 None:intergenic 25.0%
! GAACATTGTATGATATATGT+AGG - chr3_2:68254247-68254266 Msa0419980:intron 25.0%
!! AAGATTGATTTCTAACTACT+TGG - chr3_2:68254311-68254330 Msa0419980:intron 25.0%
! AAACGTAGTTAAGACAATAT+TGG + chr3_2:68254390-68254409 None:intergenic 25.0%
! CTTGATCTTCAAAATAGTTA+TGG - chr3_2:68254517-68254536 Msa0419980:intron 25.0%
!! TTAAAGTTTGACCTCTAAAA+TGG - chr3_2:68254585-68254604 Msa0419980:intron 25.0%
!! TGTAAGGTTTGAAAATTTTG+TGG + chr3_2:68254698-68254717 None:intergenic 25.0%
! ATTCGAAATAGTCCAAAATT+TGG + chr3_2:68254735-68254754 None:intergenic 25.0%
! TGTTAAAAGTTAAGAAATGG+GGG - chr3_2:68254819-68254838 Msa0419980:intron 25.0%
! AAAACTAGGTAAACACAATT+TGG - chr3_2:68255232-68255251 Msa0419980:intron 25.0%
! TTTAGGTATGATAAAATGGA+TGG + chr3_2:68255404-68255423 None:intergenic 25.0%
!!! ACTTTTTAAGGTGAATAAGT+GGG + chr3_2:68255662-68255681 None:intergenic 25.0%
!! TTAAAACCATGTTCCTTTTT+GGG + chr3_2:68256522-68256541 None:intergenic 25.0%
!!! TCAGTTTTGTACGTTAATTA+TGG - chr3_2:68256574-68256593 Msa0419980:intron 25.0%
! ATAGTAAGTTACCATTTCTA+TGG - chr3_2:68256653-68256672 Msa0419980:intron 25.0%
!! AGATTTTCTAGATGAAGTTA+AGG - chr3_2:68256726-68256745 Msa0419980:intron 25.0%
! TAACAATGATGTTAAAAGAG+AGG - chr3_2:68256951-68256970 Msa0419980:CDS 25.0%
TATGGTACAAATACAACATG+TGG + chr3_2:68253340-68253359 None:intergenic 30.0%
AGTTTAGCTAGTTGCATTAA+GGG + chr3_2:68253385-68253404 None:intergenic 30.0%
TGTGTTGCATCCTTATTAAA+AGG + chr3_2:68253544-68253563 None:intergenic 30.0%
ATGCAAATAACTGGAATATG+GGG + chr3_2:68253652-68253671 None:intergenic 30.0%
TCAGCAATAATGCAAATAAC+TGG + chr3_2:68253661-68253680 None:intergenic 30.0%
GTTATTTGCATTATTGCTGA+TGG - chr3_2:68253661-68253680 Msa0419980:CDS 30.0%
! ATTATTGCTGATGGTCTTTT+TGG - chr3_2:68253670-68253689 Msa0419980:CDS 30.0%
CCAATAAAATTCAGCTTGTA+TGG + chr3_2:68253869-68253888 None:intergenic 30.0%
! CCATACAAGCTGAATTTTAT+TGG - chr3_2:68253866-68253885 Msa0419980:intron 30.0%
AGCAAGTTGTAATTATGCTT+TGG - chr3_2:68254179-68254198 Msa0419980:CDS 30.0%
TTGAGTTATACTCATTGGAT+TGG + chr3_2:68254220-68254239 None:intergenic 30.0%
! GTGAATAAATAGGGTGTTTA+GGG + chr3_2:68254285-68254304 None:intergenic 30.0%
ACATGAGCTTCAATTTGATT+TGG + chr3_2:68254443-68254462 None:intergenic 30.0%
! TGAGATAAGAACCATTTTAG+AGG + chr3_2:68254599-68254618 None:intergenic 30.0%
CTAGAACACATGAAATAGAA+AGG - chr3_2:68254878-68254897 Msa0419980:intron 30.0%
AAAGGAAAAAAAAGCTCCAA+AGG - chr3_2:68254896-68254915 Msa0419980:intron 30.0%
AAGGAAAAAAAAGCTCCAAA+GGG - chr3_2:68254897-68254916 Msa0419980:intron 30.0%
TCTTGTATTCCAAATCTCTT+TGG - chr3_2:68254935-68254954 Msa0419980:intron 30.0%
ATTCCAAATCTCTTTGGATA+TGG - chr3_2:68254941-68254960 Msa0419980:intron 30.0%
TTCCAAATCTCTTTGGATAT+GGG - chr3_2:68254942-68254961 Msa0419980:intron 30.0%
TTGTTCCCAAATTCTTTGAA+TGG - chr3_2:68255005-68255024 Msa0419980:intron 30.0%
ATGTAGCACAAAAATATGGA+GGG + chr3_2:68255057-68255076 None:intergenic 30.0%
TATGTAGCACAAAAATATGG+AGG + chr3_2:68255058-68255077 None:intergenic 30.0%
TGATAAAATGGGAAATTCAG+AGG - chr3_2:68255319-68255338 Msa0419980:intron 30.0%
GATAAAATGGGAAATTCAGA+GGG - chr3_2:68255320-68255339 Msa0419980:intron 30.0%
!! TGGATTTGAATGATAATGGA+TGG + chr3_2:68255384-68255403 None:intergenic 30.0%
! TGGATGGATTTGAATGATAA+TGG + chr3_2:68255388-68255407 None:intergenic 30.0%
AACAATGCATTATTATGTGC+AGG - chr3_2:68255612-68255631 Msa0419980:intron 30.0%
!!! CACTTTTTAAGGTGAATAAG+TGG + chr3_2:68255663-68255682 None:intergenic 30.0%
!!! TGGCTAGAATTCACTTTTTA+AGG + chr3_2:68255674-68255693 None:intergenic 30.0%
!!! TTTTCTTGCCAAGTTTTGTT+AGG + chr3_2:68255800-68255819 None:intergenic 30.0%
! ATCTTTTAAATGCACATTGG+TGG + chr3_2:68255824-68255843 None:intergenic 30.0%
TACATATTTCCCCTTTCTAA+AGG - chr3_2:68255874-68255893 Msa0419980:intron 30.0%
TGTGTGACATAAAATACAGT+TGG - chr3_2:68255897-68255916 Msa0419980:intron 30.0%
ATAGGATGATGAGGAAAATT+TGG + chr3_2:68255974-68255993 None:intergenic 30.0%
GAAGAAAACTCTAGATAAAG+AGG + chr3_2:68256021-68256040 None:intergenic 30.0%
TGTGATGTATGTCATTGAAA+AGG + chr3_2:68256058-68256077 None:intergenic 30.0%
! AGCTTTTACTCCAGAATATA+GGG + chr3_2:68256113-68256132 None:intergenic 30.0%
CTCCTAAGAATTTAGCATTA+TGG - chr3_2:68256131-68256150 Msa0419980:intron 30.0%
GACCATAATGCTAAATTCTT+AGG + chr3_2:68256136-68256155 None:intergenic 30.0%
!! GATGAAAATTTTGTTTGCGA+TGG - chr3_2:68256237-68256256 Msa0419980:intron 30.0%
! GCTATATATGTTAGGGTTTT+TGG + chr3_2:68256466-68256485 None:intergenic 30.0%
AACCCTAACATATATAGCAT+TGG - chr3_2:68256468-68256487 Msa0419980:intron 30.0%
GACCAATGCTATATATGTTA+GGG + chr3_2:68256473-68256492 None:intergenic 30.0%
! CTTAAAACCATGTTCCTTTT+TGG + chr3_2:68256523-68256542 None:intergenic 30.0%
!! CAAAAAGGAACATGGTTTTA+AGG - chr3_2:68256521-68256540 Msa0419980:intron 30.0%
ACTTCATCTAGAAAATCTTG+TGG + chr3_2:68256724-68256743 None:intergenic 30.0%
ATAGAGGATACATAACAAGT+TGG - chr3_2:68256749-68256768 Msa0419980:CDS 30.0%
ACAATTGAAACCATTTCTTC+AGG - chr3_2:68256841-68256860 Msa0419980:CDS 30.0%
CTTGTACTAGAAATGATGAA+AGG - chr3_2:68256985-68257004 Msa0419980:CDS 30.0%
GAAATGATGAAAGGAGAAAA+AGG - chr3_2:68256994-68257013 Msa0419980:CDS 30.0%
GTGGAAGAATAAAGCTAAAA+AGG - chr3_2:68257044-68257063 Msa0419980:CDS 30.0%
! GCTAAAAAGGCTAATGATTT+TGG - chr3_2:68257057-68257076 Msa0419980:CDS 30.0%
! AAAAAGGCTAATGATTTTGG+AGG - chr3_2:68257060-68257079 Msa0419980:CDS 30.0%
TTTCCATAAGTTAATTGCAG+AGG - chr3_2:68257098-68257117 Msa0419980:CDS 30.0%
! CAAATACAACATGTGGCTTT+TGG + chr3_2:68253333-68253352 None:intergenic 35.0%
GAGTTTAGCTAGTTGCATTA+AGG + chr3_2:68253386-68253405 None:intergenic 35.0%
GTTGAATTCAGTGTTCACAA+AGG + chr3_2:68253434-68253453 None:intergenic 35.0%
TGAATTCAACCACAAACGTT+TGG - chr3_2:68253444-68253463 Msa0419980:CDS 35.0%
AAACGTTTGGTAAACTCTCT+TGG - chr3_2:68253457-68253476 Msa0419980:CDS 35.0%
CTTGGACAAGACTATATGAA+TGG - chr3_2:68253475-68253494 Msa0419980:CDS 35.0%
!! TGGTTTGCCTCCTTTTAATA+AGG - chr3_2:68253531-68253550 Msa0419980:CDS 35.0%
GTTGCATCCTTATTAAAAGG+AGG + chr3_2:68253541-68253560 None:intergenic 35.0%
!! TATGATGAGCTTGTTAAGAG+AGG - chr3_2:68253735-68253754 Msa0419980:CDS 35.0%
! GGTGAATAAATAGGGTGTTT+AGG + chr3_2:68254286-68254305 None:intergenic 35.0%
TTGAAGATCAAGCACAACAT+CGG + chr3_2:68254509-68254528 None:intergenic 35.0%
! TAATCCCACGTTCCAAATTT+TGG - chr3_2:68254720-68254739 Msa0419980:intron 35.0%
! TAGTCCAAAATTTGGAACGT+GGG + chr3_2:68254727-68254746 None:intergenic 35.0%
! ATAGTCCAAAATTTGGAACG+TGG + chr3_2:68254728-68254747 None:intergenic 35.0%
AGGAAAAAAAAGCTCCAAAG+GGG - chr3_2:68254898-68254917 Msa0419980:intron 35.0%
ATCCCATATCCAAAGAGATT+TGG + chr3_2:68254947-68254966 None:intergenic 35.0%
GAATTTGGGAACAAAGATGA+TGG + chr3_2:68254999-68255018 None:intergenic 35.0%
ACGCACCATTCAAAGAATTT+GGG + chr3_2:68255013-68255032 None:intergenic 35.0%
!!! TACCACTTGTTTTGATTGAC+CGG - chr3_2:68255429-68255448 Msa0419980:intron 35.0%
TGCCAACTTAATTATGCTCA+CGG + chr3_2:68255590-68255609 None:intergenic 35.0%
CATTATTATGTGCAGGAGTT+GGG - chr3_2:68255619-68255638 Msa0419980:intron 35.0%
ATTATTATGTGCAGGAGTTG+GGG - chr3_2:68255620-68255639 Msa0419980:intron 35.0%
!! AATTACTTTGGGTTTTCGCT+TGG + chr3_2:68255729-68255748 None:intergenic 35.0%
CTAAGATCTCTGACAAAGTA+AGG - chr3_2:68255774-68255793 Msa0419980:intron 35.0%
AAGTAAGGCCTAACAAAACT+TGG - chr3_2:68255789-68255808 Msa0419980:intron 35.0%
! ATGTCACACACCTTTAGAAA+GGG + chr3_2:68255887-68255906 None:intergenic 35.0%
! TATGTCACACACCTTTAGAA+AGG + chr3_2:68255888-68255907 None:intergenic 35.0%
! ATGAGGAAAATTTGGTTCCT+TGG + chr3_2:68255966-68255985 None:intergenic 35.0%
TAAAGAGGATTCACAAGTAG+TGG + chr3_2:68256006-68256025 None:intergenic 35.0%
! GAGCTTTTACTCCAGAATAT+AGG + chr3_2:68256114-68256133 None:intergenic 35.0%
! CCAATCTAAACTTGTTTCCA+AGG + chr3_2:68256265-68256284 None:intergenic 35.0%
CCTTGGAAACAAGTTTAGAT+TGG - chr3_2:68256262-68256281 Msa0419980:intron 35.0%
ACAAGTTTAGATTGGATCTC+AGG - chr3_2:68256270-68256289 Msa0419980:intron 35.0%
GGACCAATGCTATATATGTT+AGG + chr3_2:68256474-68256493 None:intergenic 35.0%
TGGTAGAAACTTTCCCAAAA+AGG - chr3_2:68256506-68256525 Msa0419980:intron 35.0%
AACTTTCCCAAAAAGGAACA+TGG - chr3_2:68256513-68256532 Msa0419980:intron 35.0%
TTAACGTACAAAACTGAGCT+AGG + chr3_2:68256571-68256590 None:intergenic 35.0%
ACCACTTGAAAGAATTTGCA+TGG - chr3_2:68256620-68256639 Msa0419980:intron 35.0%
CCACTTGAAAGAATTTGCAT+GGG - chr3_2:68256621-68256640 Msa0419980:intron 35.0%
CACTTGAAAGAATTTGCATG+GGG - chr3_2:68256622-68256641 Msa0419980:intron 35.0%
GGTCTCATTATCCATAGAAA+TGG + chr3_2:68256667-68256686 None:intergenic 35.0%
AATGAGACCAGATGTAGTAA+TGG - chr3_2:68256678-68256697 Msa0419980:intron 35.0%
ATGAGACCAGATGTAGTAAT+GGG - chr3_2:68256679-68256698 Msa0419980:intron 35.0%
CTAGATGAAGTTAAGGATAG+AGG - chr3_2:68256733-68256752 Msa0419980:intron 35.0%
! TTTTTCTAACTCATTGCGGT+TGG - chr3_2:68256812-68256831 Msa0419980:CDS 35.0%
AAGAATGGCCAACAAATAGT+AGG + chr3_2:68256871-68256890 None:intergenic 35.0%
CTGAGCAACAAACAAATTGT+AGG - chr3_2:68256893-68256912 Msa0419980:CDS 35.0%
GTAGGTATTTATGCAACACT+TGG - chr3_2:68256911-68256930 Msa0419980:CDS 35.0%
TTATGCAACACTTGGAAAGT+AGG - chr3_2:68256919-68256938 Msa0419980:CDS 35.0%
TGAAACAAAAGAGCTTAGAG+TGG - chr3_2:68257025-68257044 Msa0419980:CDS 35.0%
GAACCTCTGCAATTAACTTA+TGG + chr3_2:68257104-68257123 None:intergenic 35.0%
CAGTGTTCACAAAGGTTATG+TGG + chr3_2:68253426-68253445 None:intergenic 40.0%
GAGAGTTTACCAAACGTTTG+TGG + chr3_2:68253456-68253475 None:intergenic 40.0%
! CAATTTGAGACCATACCTGA+TGG - chr3_2:68253511-68253530 Msa0419980:CDS 40.0%
TTAAAAGGAGGCAAACCATC+AGG + chr3_2:68253529-68253548 None:intergenic 40.0%
!!! GCTGATGGTCTTTTTGGTTT+TGG - chr3_2:68253676-68253695 Msa0419980:CDS 40.0%
TGAAGAGGTTTACCTTGGAA+TGG + chr3_2:68253768-68253787 None:intergenic 40.0%
TGCAATGAAGAGGTTTACCT+TGG + chr3_2:68253773-68253792 None:intergenic 40.0%
!! CTTTTGTGGAAAGGTACGTT+TGG - chr3_2:68253912-68253931 Msa0419980:intron 40.0%
! AGGGTGTTTAGGGTTTGAAT+CGG + chr3_2:68254275-68254294 None:intergenic 40.0%
AAGCACAACATCGGTGATTA+TGG + chr3_2:68254500-68254519 None:intergenic 40.0%
AATACAACCCTTCTCACATG+TGG - chr3_2:68254624-68254643 Msa0419980:intron 40.0%
GGAAAAAAAAGCTCCAAAGG+GGG - chr3_2:68254899-68254918 Msa0419980:intron 40.0%
!! AAAGATGATGGAGAAGGAGA+AGG + chr3_2:68254987-68255006 None:intergenic 40.0%
CACGCACCATTCAAAGAATT+TGG + chr3_2:68255014-68255033 None:intergenic 40.0%
CACAAAAATATGGAGGGAGA+AGG + chr3_2:68255051-68255070 None:intergenic 40.0%
TTTGATTGACCGGACATCAA+AGG - chr3_2:68255439-68255458 Msa0419980:intron 40.0%
TTGATTGACCGGACATCAAA+GGG - chr3_2:68255440-68255459 Msa0419980:intron 40.0%
CCAACTTAATTATGCTCACG+GGG + chr3_2:68255588-68255607 None:intergenic 40.0%
GCCAACTTAATTATGCTCAC+GGG + chr3_2:68255589-68255608 None:intergenic 40.0%
!! GTGAGCATAATTAAGTTGGC+AGG - chr3_2:68255589-68255608 Msa0419980:intron 40.0%
GCATTATTATGTGCAGGAGT+TGG - chr3_2:68255618-68255637 Msa0419980:intron 40.0%
! TGTCACACACCTTTAGAAAG+GGG + chr3_2:68255886-68255905 None:intergenic 40.0%
ATGGAGAAACTGCACCAATT+GGG + chr3_2:68255929-68255948 None:intergenic 40.0%
CTTGGAGGTTTAGAAGAAGA+TGG + chr3_2:68255948-68255967 None:intergenic 40.0%
CATCTTCTTCTAAACCTCCA+AGG - chr3_2:68255946-68255965 Msa0419980:intron 40.0%
! AGGAAAATTTGGTTCCTTGG+AGG + chr3_2:68255963-68255982 None:intergenic 40.0%
TGTGTTAGCATAGGATGATG+AGG + chr3_2:68255983-68256002 None:intergenic 40.0%
AAGTAGTGGTGTGTTAGCAT+AGG + chr3_2:68255992-68256011 None:intergenic 40.0%
CATTGTGATGCCCTATATTC+TGG - chr3_2:68256100-68256119 Msa0419980:intron 40.0%
TAACTCTCATGAAGCTTGGA+AGG + chr3_2:68256320-68256339 None:intergenic 40.0%
TCAGTAACTCTCATGAAGCT+TGG + chr3_2:68256324-68256343 None:intergenic 40.0%
! GTTTGATTTCATGGGTTCTG+AGG - chr3_2:68256359-68256378 Msa0419980:intron 40.0%
!!! GTTAGGGTTTTTGGTCCTAA+GGG + chr3_2:68256457-68256476 None:intergenic 40.0%
!!! TGTTAGGGTTTTTGGTCCTA+AGG + chr3_2:68256458-68256477 None:intergenic 40.0%
TTTCTACCAAGCATGTGAAG+TGG + chr3_2:68256495-68256514 None:intergenic 40.0%
!!! GAACATGGTTTTAAGGCCAA+TGG - chr3_2:68256528-68256547 Msa0419980:intron 40.0%
TTCTACCAAGCATGAACCAT+TGG + chr3_2:68256547-68256566 None:intergenic 40.0%
CCCATGCAAATTCTTTCAAG+TGG + chr3_2:68256624-68256643 None:intergenic 40.0%
TCTTCACCCATTACTACATC+TGG + chr3_2:68256688-68256707 None:intergenic 40.0%
GTTAGAAAAACCCCAACTGA+TGG + chr3_2:68256802-68256821 None:intergenic 40.0%
! GGGGTTTTTCTAACTCATTG+CGG - chr3_2:68256808-68256827 Msa0419980:CDS 40.0%
AGTAGGAACACCTGAAGAAA+TGG + chr3_2:68256854-68256873 None:intergenic 40.0%
CAGGTGTTCCTACTATTTGT+TGG - chr3_2:68256860-68256879 Msa0419980:CDS 40.0%
! GTTTGTTGCTCAGCAAAGAA+TGG + chr3_2:68256886-68256905 None:intergenic 40.0%
CAACACTTGGAAAGTAGGAA+TGG - chr3_2:68256924-68256943 Msa0419980:CDS 40.0%
ATTTGTACCATACCCAGCAC+AGG - chr3_2:68253348-68253367 Msa0419980:CDS 45.0%
TTTGTACCATACCCAGCACA+GGG - chr3_2:68253349-68253368 Msa0419980:CDS 45.0%
GATTAACATGACCCTGTGCT+GGG + chr3_2:68253363-68253382 None:intergenic 45.0%
GCTAAACTCCTACGTTGCAA+AGG - chr3_2:68253397-68253416 Msa0419980:CDS 45.0%
TGTGGAAACCTTTGCAACGT+AGG + chr3_2:68253408-68253427 None:intergenic 45.0%
! TTTTGGACTGCTTCTGCTTG+TGG - chr3_2:68253693-68253712 Msa0419980:CDS 45.0%
!! AGAGGCATTCTTCCATTCCA+AGG - chr3_2:68253753-68253772 Msa0419980:CDS 45.0%
!! TTGTTGGGTTTGGTGCAGTT+TGG + chr3_2:68253976-68253995 None:intergenic 45.0%
GGAACGTGGGATTACATGTA+AGG + chr3_2:68254714-68254733 None:intergenic 45.0%
TAGTGATGAACAACCCCCTT+TGG + chr3_2:68254915-68254934 None:intergenic 45.0%
!! GGGAACAAAGATGATGGAGA+AGG + chr3_2:68254993-68255012 None:intergenic 45.0%
TTCTTTGAATGGTGCGTGAG+AGG - chr3_2:68255016-68255035 Msa0419980:intron 45.0%
TCTTTGAATGGTGCGTGAGA+GGG - chr3_2:68255017-68255036 Msa0419980:intron 45.0%
GTCCGGTCAATCAAAACAAG+TGG + chr3_2:68255434-68255453 None:intergenic 45.0%
TGATTGACCGGACATCAAAG+GGG - chr3_2:68255441-68255460 Msa0419980:intron 45.0%
!! ATCAAAGGGGCATTGTGTTG+CGG - chr3_2:68255454-68255473 Msa0419980:CDS 45.0%
CCCCGTGAGCATAATTAAGT+TGG - chr3_2:68255585-68255604 Msa0419980:intron 45.0%
AGGTGAATAAGTGGGATGTC+CGG + chr3_2:68255654-68255673 None:intergenic 45.0%
AAACTGCACCAATTGGGCTA+AGG + chr3_2:68255923-68255942 None:intergenic 45.0%
GATGGAGAAACTGCACCAAT+TGG + chr3_2:68255930-68255949 None:intergenic 45.0%
!! TTTTGTTTGCGATGGCACCT+TGG - chr3_2:68256245-68256264 Msa0419980:intron 45.0%
ATTGGTCCACTTCACATGCT+TGG - chr3_2:68256486-68256505 Msa0419980:intron 45.0%
TAAGGCCAATGGTTCATGCT+TGG - chr3_2:68256539-68256558 Msa0419980:intron 45.0%
TGCTTGCTCATCCATCAGTT+GGG - chr3_2:68256788-68256807 Msa0419980:CDS 45.0%
!! TAATAATTAAAAAATCTAAT+CGG + chr3_2:68253944-68253963 None:intergenic 5.0%
!! AAAAAAAAATTACAAAAATT+GGG - chr3_2:68255700-68255719 Msa0419980:intron 5.0%
GGATTAACATGACCCTGTGC+TGG + chr3_2:68253364-68253383 None:intergenic 50.0%
AGGAGGCAAACCATCAGGTA+TGG + chr3_2:68253524-68253543 None:intergenic 50.0%
CTAGTTGCGTCACACAACGT+TGG + chr3_2:68253574-68253593 None:intergenic 50.0%
CAACGTTGTGTGACGCAACT+AGG - chr3_2:68253572-68253591 Msa0419980:CDS 50.0%
! TGCTTCTGCTTGTGGCTTTG+TGG - chr3_2:68253701-68253720 Msa0419980:CDS 50.0%
!! GCTTCTGCTTGTGGCTTTGT+GGG - chr3_2:68253702-68253721 Msa0419980:CDS 50.0%
CTGCACACCACATGTGAGAA+GGG + chr3_2:68254634-68254653 None:intergenic 50.0%
!! GATGATGGAGAAGGAGAAGG+TGG + chr3_2:68254984-68255003 None:intergenic 50.0%
CACAATGCCCCTTTGATGTC+CGG + chr3_2:68255451-68255470 None:intergenic 50.0%
GTGAATAAGTGGGATGTCCG+GGG + chr3_2:68255652-68255671 None:intergenic 50.0%
GGTGAATAAGTGGGATGTCC+GGG + chr3_2:68255653-68255672 None:intergenic 50.0%
!! ACAGTTGGCCTTAGCCCAAT+TGG - chr3_2:68255912-68255931 Msa0419980:intron 50.0%
! ATGAAGTGCTTGCCACCCTT+AGG - chr3_2:68256439-68256458 Msa0419980:intron 50.0%
!!! AGGGTTTTTGGTCCTAAGGG+TGG + chr3_2:68256454-68256473 None:intergenic 50.0%
! CTGATGGATGAGCAAGCACT+TGG + chr3_2:68256786-68256805 None:intergenic 50.0%
GTGCTTGCTCATCCATCAGT+TGG - chr3_2:68256787-68256806 Msa0419980:CDS 50.0%
GCTTGCTCATCCATCAGTTG+GGG - chr3_2:68256789-68256808 Msa0419980:CDS 50.0%
ACATGACCCTGTGCTGGGTA+TGG + chr3_2:68253358-68253377 None:intergenic 55.0%
CCTGCACACCACATGTGAGA+AGG + chr3_2:68254635-68254654 None:intergenic 55.0%
CCTTCTCACATGTGGTGTGC+AGG - chr3_2:68254632-68254651 Msa0419980:intron 55.0%
!! AAAGGGGCATTGTGTTGCGG+AGG - chr3_2:68255457-68255476 Msa0419980:CDS 55.0%
AGGAGTTGGGGTTCAAACCC+CGG - chr3_2:68255632-68255651 Msa0419980:intron 55.0%
! GGAAATTCAGAGGGCGCGTG+AGG - chr3_2:68255329-68255348 Msa0419980:intron 60.0%
Chromosome Type Strat End Strand Name
chr3_2 gene 68253325 68257143 68253325 ID=Msa0419980;Name=Msa0419980
chr3_2 mRNA 68253325 68257143 68253325 ID=Msa0419980-mRNA-1;Parent=Msa0419980;Name=Msa0419980-mRNA-1;_AED=0.08;_eAED=0.08;_QI=0|0|0|0.75|1|1|4|0|428
chr3_2 exon 68256749 68257143 68256749 ID=Msa0419980-mRNA-1:exon:16054;Parent=Msa0419980-mRNA-1
chr3_2 exon 68255442 68255494 68255442 ID=Msa0419980-mRNA-1:exon:16053;Parent=Msa0419980-mRNA-1
chr3_2 exon 68253919 68254230 68253919 ID=Msa0419980-mRNA-1:exon:16052;Parent=Msa0419980-mRNA-1
chr3_2 exon 68253325 68253851 68253325 ID=Msa0419980-mRNA-1:exon:16051;Parent=Msa0419980-mRNA-1
chr3_2 CDS 68256749 68257143 68256749 ID=Msa0419980-mRNA-1:cds;Parent=Msa0419980-mRNA-1
chr3_2 CDS 68255442 68255494 68255442 ID=Msa0419980-mRNA-1:cds;Parent=Msa0419980-mRNA-1
chr3_2 CDS 68253919 68254230 68253919 ID=Msa0419980-mRNA-1:cds;Parent=Msa0419980-mRNA-1
chr3_2 CDS 68253325 68253851 68253325 ID=Msa0419980-mRNA-1:cds;Parent=Msa0419980-mRNA-1
Gene Sequence

>Msa0419980

ATGGACCAAAAGCCACATGTTGTATTTGTACCATACCCAGCACAGGGTCATGTTAATCCCTTAATGCAACTAGCTAAACTCCTACGTTGCAAAGGTTTCCACATAACCTTTGTGAACACTGAATTCAACCACAAACGTTTGGTAAACTCTCTTGGACAAGACTATATGAATGGTCTATCAGATTTTCAATTTGAGACCATACCTGATGGTTTGCCTCCTTTTAATAAGGATGCAACACAAGATATTCCAACGTTGTGTGACGCAACTAGGAAAAATTGTTATGCTCCTTTCAAAGAGCTTATCAATAAGCTTAATACTTCATCACCCCATATTCCAGTTATTTGCATTATTGCTGATGGTCTTTTTGGTTTTGGACTGCTTCTGCTTGTGGCTTTAGCAGTTCCACCTTCTCCTTCTCCATCATCTTTGTTCCCAAATTCTTTGAATGATGAAAATTTTGTTTGCGATGGCACCTTGGAAACAAGTTTAGATTGGATCTCAGGAATGAAAGATATCAAATTAAAAGACCTTCCAAGCTTCATGAGAGTTACTGATTTAAATGATATTATGTTTGATTTCATGGGTTCTGAGGCACAAAACTGTTTGAGATCATCTACAATTATAATCAACACATTTGAAGAATTAGAAGATGAAGTGCTTGCCACCCTTAGGACCAAAAACCCTAACATATATAGCATTGGTCCACTTCACATGCTTGGTAGAAACTTTCCCAAAAAGGAACATGGTTTTAAGGCCAATGATCACCACTTGAAAGAATTTGCATGGGGAATAGCAAATAGTAAGTTACCATTTCTATGGATAATGAGACCAGATGTAGTAATGGGTGAAGAAATTTCAACTTTGCCACAAGATTTTCTAGATGAAGTTAAGGATAGAGGATACATAACAAGTTGGTGCATGCAAGACCAAGTGCTTGCTCATCCATCAGTTGGGGTTTTTCTAACTCATTGCGGTTGGAATTCTACAATTGAAACCATTTCTTCAGGTGTTCCTACTATTTGTTGGCCATTCTTTGCTGAGCAACAAACAAATTGTAGGTATTTATGCAACACTTGGAAAGTAGGAATGGAAATTAACAATGATGTTAAAAGAGAGGAGATAACAGAACTTGTACTAGAAATGATGAAAGGAGAAAAAGGAAGAGAAATGAAACAAAAGAGCTTAGAGTGGAAGAATAAAGCTAAAAAGGCTAATGATTTTGGAGGATCATCATACACTAATTTCCATAAGTTAATTGCAGAGGTTCTTCGTCACAATAATATTTAA

Protein sequence

>Msa0419980

MDQKPHVVFVPYPAQGHVNPLMQLAKLLRCKGFHITFVNTEFNHKRLVNSLGQDYMNGLSDFQFETIPDGLPPFNKDATQDIPTLCDATRKNCYAPFKELINKLNTSSPHIPVICIIADGLFGFGLLLLVALAVPPSPSPSSLFPNSLNDENFVCDGTLETSLDWISGMKDIKLKDLPSFMRVTDLNDIMFDFMGSEAQNCLRSSTIIINTFEELEDEVLATLRTKNPNIYSIGPLHMLGRNFPKKEHGFKANDHHLKEFAWGIANSKLPFLWIMRPDVVMGEEISTLPQDFLDEVKDRGYITSWCMQDQVLAHPSVGVFLTHCGWNSTIETISSGVPTICWPFFAEQQTNCRYLCNTWKVGMEINNDVKREEITELVLEMMKGEKGREMKQKSLEWKNKAKKANDFGGSSYTNFHKLIAEVLRHNNI*