Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0016570 | Msa0824600 | 0.804185 | 2.439011e-49 | -8.615850e-47 |
| Msa0102070 | Msa0824600 | 0.806560 | 7.752033e-50 | -8.615850e-47 |
| Msa0604350 | Msa0824600 | 0.814876 | 1.232289e-51 | -8.615850e-47 |
| Msa0639610 | Msa0824600 | 0.829171 | 5.975744e-55 | -8.615850e-47 |
| Msa0650630 | Msa0824600 | 0.819525 | 1.109708e-52 | -8.615850e-47 |
| Msa0694370 | Msa0824600 | 0.813463 | 2.527406e-51 | -8.615850e-47 |
| Msa0701010 | Msa0824600 | 0.804724 | 1.883083e-49 | -8.615850e-47 |
| Msa0703120 | Msa0824600 | 0.801889 | 7.276552e-49 | -8.615850e-47 |
| Msa0725850 | Msa0824600 | 0.810175 | 1.313686e-50 | -8.615850e-47 |
| Msa0726140 | Msa0824600 | 0.830638 | 2.624481e-55 | -8.615850e-47 |
| Msa0729800 | Msa0824600 | 0.837404 | 5.303067e-57 | -8.615850e-47 |
| Msa0733290 | Msa0824600 | 0.836438 | 9.355553e-57 | -8.615850e-47 |
| Msa0743810 | Msa0824600 | 0.841532 | 4.489005e-58 | -8.615850e-47 |
| Msa0745060 | Msa0824600 | 0.835494 | 1.624635e-56 | -8.615850e-47 |
| Msa0766630 | Msa0824600 | 0.806869 | 6.669530e-50 | -8.615850e-47 |
| Msa0768290 | Msa0824600 | 0.826482 | 2.647977e-54 | -8.615850e-47 |
| Msa0768370 | Msa0824600 | 0.836127 | 1.122279e-56 | -8.615850e-47 |
| Msa0775300 | Msa0824600 | 0.808712 | 2.707180e-50 | -8.615850e-47 |
| Msa0783160 | Msa0824600 | 0.837424 | 5.241465e-57 | -8.615850e-47 |
| Msa0784290 | Msa0824600 | 0.821206 | 4.566658e-53 | -8.615850e-47 |
| Msa0784300 | Msa0824600 | 0.821475 | 3.958126e-53 | -8.615850e-47 |
| Msa0808010 | Msa0824600 | 0.820638 | 6.172043e-53 | -8.615850e-47 |
| Msa0808020 | Msa0824600 | 0.812510 | 4.088057e-51 | -8.615850e-47 |
| Msa0811270 | Msa0824600 | 0.818351 | 2.051224e-52 | -8.615850e-47 |
| Msa0824590 | Msa0824600 | 0.867321 | 1.492103e-65 | -8.615850e-47 |
| Msa0824600 | Msa0825860 | 0.835365 | 1.751011e-56 | -8.615850e-47 |
| Msa0824600 | Msa0844490 | 0.806089 | 9.744187e-50 | -8.615850e-47 |
| Msa0824600 | Msa0845930 | 0.802133 | 6.481634e-49 | -8.615850e-47 |
| Msa0824600 | Msa0846210 | 0.821040 | 4.987085e-53 | -8.615850e-47 |
| Msa0824600 | Msa0846330 | 0.823061 | 1.696431e-53 | -8.615850e-47 |
| Msa0824600 | Msa0846350 | 0.834091 | 3.661400e-56 | -8.615850e-47 |
| Msa0824600 | Msa0848960 | 0.806787 | 6.942804e-50 | -8.615850e-47 |
| Msa0824600 | Msa0858980 | 0.828288 | 9.771587e-55 | -8.615850e-47 |
| Msa0824600 | Msa0864070 | 0.869069 | 4.080162e-66 | -8.615850e-47 |
| Msa0824600 | Msa0865320 | 0.815755 | 7.856207e-52 | -8.615850e-47 |
| Msa0824600 | Msa0877250 | 0.836420 | 9.455858e-57 | -8.615850e-47 |
| Msa0824600 | Msa0885290 | 0.805972 | 1.031217e-49 | -8.615850e-47 |
| Msa0824600 | Msa0888370 | 0.824408 | 8.202102e-54 | -8.615850e-47 |
| Msa0824600 | Msa0899430 | 0.845397 | 4.165006e-59 | -8.615850e-47 |
| Msa0824600 | Msa0899450 | 0.840063 | 1.089643e-57 | -8.615850e-47 |
| Msa0824600 | Msa0907260 | 0.815998 | 6.934894e-52 | -8.615850e-47 |
| Msa0824600 | Msa0924050 | 0.810935 | 9.000207e-51 | -8.615850e-47 |
| Msa0824600 | Msa0927380 | 0.801185 | 1.014619e-48 | -8.615850e-47 |
| Msa0824600 | Msa0952720 | 0.807024 | 6.186625e-50 | -8.615850e-47 |
| Msa0824600 | Msa0954910 | 0.805399 | 1.360186e-49 | -8.615850e-47 |
| Msa0824600 | Msa0956270 | 0.812618 | 3.871944e-51 | -8.615850e-47 |
| Msa0824600 | Msa0958550 | 0.847520 | 1.097745e-59 | -8.615850e-47 |
| Msa0824600 | Msa0966750 | 0.818944 | 1.504876e-52 | -8.615850e-47 |
| Msa0824600 | Msa0989060 | 0.841103 | 5.821531e-58 | -8.615850e-47 |
| Msa0824600 | Msa1016280 | 0.813700 | 2.241991e-51 | -8.615850e-47 |
| Msa0824600 | Msa1023050 | 0.802809 | 4.703956e-49 | -8.615850e-47 |
| Msa0824600 | Msa1025360 | 0.850765 | 1.374041e-60 | -8.615850e-47 |
| Msa0824600 | Msa1025370 | 0.838993 | 2.067077e-57 | -8.615850e-47 |
| Msa0824600 | Msa1028230 | 0.808915 | 2.449050e-50 | -8.615850e-47 |
| Msa0824600 | Msa1044830 | 0.839740 | 1.322473e-57 | -8.615850e-47 |
| Msa0824600 | Msa1044840 | 0.850656 | 1.474419e-60 | -8.615850e-47 |
| Msa0824600 | Msa1060840 | 0.815699 | 8.087164e-52 | -8.615850e-47 |
| Msa0824600 | Msa1092990 | 0.838587 | 2.631374e-57 | -8.615850e-47 |
| Msa0824600 | Msa1100980 | 0.817841 | 2.674500e-52 | -8.615850e-47 |
| Msa0824600 | Msa1112300 | 0.820261 | 7.530995e-53 | -8.615850e-47 |
| Msa0824600 | Msa1114030 | 0.807057 | 6.087982e-50 | -8.615850e-47 |
| Msa0824600 | Msa1120610 | 0.800608 | 1.330520e-48 | -8.615850e-47 |
| Msa0824600 | Msa1121480 | 0.836069 | 1.161551e-56 | -8.615850e-47 |
| Msa0824600 | Msa1121490 | 0.849431 | 3.247529e-60 | -8.615850e-47 |
| Msa0824600 | Msa1136090 | 0.808550 | 2.931753e-50 | -8.615850e-47 |
| Msa0824600 | Msa1146110 | 0.800903 | 1.158376e-48 | -8.615850e-47 |
| Msa0824600 | Msa1149360 | 0.816087 | 6.626791e-52 | -8.615850e-47 |
| Msa0824600 | Msa1150370 | 0.804783 | 1.829864e-49 | -8.615850e-47 |
| Msa0824600 | Msa1173920 | 0.816471 | 5.436411e-52 | -8.615850e-47 |
| Msa0824600 | Msa1187950 | 0.815129 | 1.083054e-51 | -8.615850e-47 |
| Msa0824600 | Msa1192640 | 0.812947 | 3.280274e-51 | -8.615850e-47 |
| Msa0824600 | Msa1246880 | 0.808262 | 3.377276e-50 | -8.615850e-47 |
| Msa0824600 | Msa1248310 | 0.831133 | 1.983500e-55 | -8.615850e-47 |
| Msa0824600 | Msa1248370 | 0.813693 | 2.248944e-51 | -8.615850e-47 |
| Msa0824600 | Msa1269670 | 0.831746 | 1.401607e-55 | -8.615850e-47 |
| Msa0824600 | Msa1270230 | 0.820863 | 5.477029e-53 | -8.615850e-47 |
| Msa0824600 | Msa1270240 | 0.846295 | 2.375775e-59 | -8.615850e-47 |
| Msa0824600 | Msa1270270 | 0.804846 | 1.775808e-49 | -8.615850e-47 |
| Msa0824600 | Msa1283330 | 0.829001 | 6.570343e-55 | -8.615850e-47 |
| Msa0824600 | Msa1284680 | 0.823504 | 1.336604e-53 | -8.615850e-47 |
| Msa0824600 | Msa1285930 | 0.834351 | 3.152223e-56 | -8.615850e-47 |
| Msa0824600 | Msa1287800 | 0.824274 | 8.821206e-54 | -8.615850e-47 |
| Msa0824600 | Msa1287810 | 0.830742 | 2.474951e-55 | -8.615850e-47 |
| Msa0824600 | Msa1289430 | 0.814323 | 1.633452e-51 | -8.615850e-47 |
| Msa0824600 | Msa1307890 | 0.809294 | 2.031673e-50 | -8.615850e-47 |
| Msa0824600 | Msa1320300 | 0.829786 | 4.236782e-55 | -8.615850e-47 |
| Msa0824600 | Msa1321560 | 0.807054 | 6.095018e-50 | -8.615850e-47 |
| Msa0824600 | Msa1340590 | 0.810175 | 1.313616e-50 | -8.615850e-47 |
| Msa0824600 | Msa1344520 | 0.812348 | 4.434890e-51 | -8.615850e-47 |
| Msa0824600 | Msa1360610 | 0.826871 | 2.138731e-54 | -8.615850e-47 |
| Msa0824600 | Msa1369430 | 0.827027 | 1.962426e-54 | -8.615850e-47 |
| Msa0824600 | Msa1386330 | 0.827154 | 1.829528e-54 | -8.615850e-47 |
| Msa0824600 | Msa1397580 | 0.817823 | 2.699445e-52 | -8.615850e-47 |
| Msa0824600 | Msa1402790 | 0.842523 | 2.455344e-58 | -8.615850e-47 |
| Msa0824600 | Msa1404000 | 0.820618 | 6.237288e-53 | -8.615850e-47 |
| Msa0824600 | Msa1415310 | 0.825902 | 3.638345e-54 | -8.615850e-47 |
| Msa0824600 | Msa1422180 | 0.837210 | 5.945982e-57 | -8.615850e-47 |
| Msa0824600 | Msa1433120 | 0.800644 | 1.308354e-48 | -8.615850e-47 |
| Msa0824600 | Msa1451570 | 0.801971 | 6.998601e-49 | -8.615850e-47 |
| Msa0123810 | Msa0824600 | 0.810438 | 1.152889e-50 | -8.615850e-47 |
| Msa0188460 | Msa0824600 | 0.800450 | 1.433388e-48 | -8.615850e-47 |
| Msa0199240 | Msa0824600 | 0.800011 | 1.760708e-48 | -8.615850e-47 |
| Msa0200000 | Msa0824600 | 0.814109 | 1.820987e-51 | -8.615850e-47 |
| Msa0227480 | Msa0824600 | 0.809078 | 2.260460e-50 | -8.615850e-47 |
| Msa0232850 | Msa0824600 | 0.809659 | 1.695985e-50 | -8.615850e-47 |
| Msa0384800 | Msa0824600 | 0.811794 | 5.857422e-51 | -8.615850e-47 |
| Msa0384890 | Msa0824600 | 0.815968 | 7.042567e-52 | -8.615850e-47 |
| Msa0394970 | Msa0824600 | 0.811111 | 8.245016e-51 | -8.615850e-47 |
| Msa0414420 | Msa0824600 | 0.820365 | 7.130302e-53 | -8.615850e-47 |
| Msa0419980 | Msa0824600 | 0.800100 | 1.688504e-48 | -8.615850e-47 |
| Msa0430420 | Msa0824600 | 0.804225 | 2.392817e-49 | -8.615850e-47 |
| Msa0435230 | Msa0824600 | 0.855093 | 7.950207e-62 | -8.615850e-47 |
| Msa0436800 | Msa0824600 | 0.800524 | 1.384024e-48 | -8.615850e-47 |
| Msa0444130 | Msa0824600 | 0.820498 | 6.644912e-53 | -8.615850e-47 |
| Msa0450000 | Msa0824600 | 0.846771 | 1.761208e-59 | -8.615850e-47 |
| Msa0452900 | Msa0824600 | 0.833353 | 5.601260e-56 | -8.615850e-47 |
| Msa0453120 | Msa0824600 | 0.815869 | 7.410940e-52 | -8.615850e-47 |
| Msa0454910 | Msa0824600 | 0.816949 | 4.248010e-52 | -8.615850e-47 |
| Msa0479340 | Msa0824600 | 0.861009 | 1.386362e-63 | -8.615850e-47 |
| Msa0247260 | Msa0824600 | 0.817373 | 3.410068e-52 | -8.615850e-47 |
| Msa0251320 | Msa0824600 | 0.827496 | 1.515282e-54 | -8.615850e-47 |
| Msa0251640 | Msa0824600 | 0.802652 | 5.066927e-49 | -8.615850e-47 |
| Msa0267000 | Msa0824600 | 0.832771 | 7.815617e-56 | -8.615850e-47 |
| Msa0267010 | Msa0824600 | 0.840770 | 7.118572e-58 | -8.615850e-47 |
| Msa0307540 | Msa0824600 | 0.803655 | 3.142386e-49 | -8.615850e-47 |
| Msa0311750 | Msa0824600 | 0.803336 | 3.659782e-49 | -8.615850e-47 |
| Msa0342240 | Msa0824600 | 0.812192 | 4.797802e-51 | -8.615850e-47 |
| Msa0360510 | Msa0824600 | 0.819952 | 8.864002e-53 | -8.615850e-47 |
| Msa0491590 | Msa0824600 | 0.823165 | 1.604296e-53 | -8.615850e-47 |
| Msa0502760 | Msa0824600 | 0.814719 | 1.335164e-51 | -8.615850e-47 |
| Msa0564890 | Msa0824600 | 0.825645 | 4.187274e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 20 sgRNAs with CRISPR-Local
Find 48 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTTCGTTTGTTAAATCATTT+AGG | 0.281266 | 5_3:+64026515 | Msa0824600:CDS |
| CGAGCTGCTAGATTAGGTTT+TGG | 0.331839 | 5_3:+64026424 | Msa0824600:CDS |
| GCTGTTTGGGAACTAGTTAA+TGG | 0.356582 | 5_3:+64025864 | Msa0824600:CDS |
| CAAGATTGAGATGGCTGTTT+GGG | 0.360205 | 5_3:+64025851 | None:intergenic |
| CCACAGTGTTTACTAATAGA+TGG | 0.393695 | 5_3:+64025952 | Msa0824600:CDS |
| TCCTAGCTAGAAAGGTGATA+TGG | 0.410532 | 5_3:-64025896 | None:intergenic |
| TCACTGCGAGCTGCTAGATT+AGG | 0.430552 | 5_3:+64026418 | Msa0824600:CDS |
| TCAAGATTGAGATGGCTGTT+TGG | 0.443129 | 5_3:+64025850 | None:intergenic |
| CGGATAAGATGGAAGATAAG+AGG | 0.483166 | 5_3:-64026464 | None:intergenic |
| TAGCATAATAACGGATAAGA+TGG | 0.485732 | 5_3:-64026475 | None:intergenic |
| ACCATATCACCTTTCTAGCT+AGG | 0.492797 | 5_3:+64025895 | Msa0824600:CDS |
| TCTTATCCGTTATTATGCTA+TGG | 0.498677 | 5_3:+64026478 | Msa0824600:CDS |
| CTAGAAAGGTGATATGGTAA+AGG | 0.506004 | 5_3:-64025890 | None:intergenic |
| ATCAGCATTCCTAGCTAGAA+AGG | 0.535370 | 5_3:-64025904 | None:intergenic |
| AGCTTGCCATAGCATAATAA+CGG | 0.565019 | 5_3:-64026484 | None:intergenic |
| AAGATGGAAGATAAGAGGAT+CGG | 0.605242 | 5_3:-64026459 | None:intergenic |
| TGTTTACTAATAGATGGATG+AGG | 0.629998 | 5_3:+64025958 | Msa0824600:CDS |
| TACTAATAGATGGATGAGGA+AGG | 0.630665 | 5_3:+64025962 | Msa0824600:CDS |
| ATGATTTAACAAACGAACGC+AGG | 0.657550 | 5_3:-64026510 | None:intergenic |
| CCATCTATTAGTAAACACTG+TGG | 0.792095 | 5_3:-64025952 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AGCAAATAATATTTTTGTTA+GGG | - | chr5_3:64026229-64026248 | None:intergenic | 15.0% |
| !!! | AAGCAAATAATATTTTTGTT+AGG | - | chr5_3:64026230-64026249 | None:intergenic | 15.0% |
| !!! | GCAAATAATATTTTTGTTAG+GGG | - | chr5_3:64026228-64026247 | None:intergenic | 20.0% |
| ! | ATAGACTGAATTTACATAAC+TGG | - | chr5_3:64026279-64026298 | None:intergenic | 25.0% |
| ! | TGTACTCTAAATCATATAGA+AGG | - | chr5_3:64026328-64026347 | None:intergenic | 25.0% |
| !! | GGTTCTTGTTTACATAATTA+CGG | + | chr5_3:64026357-64026376 | Msa0824600:intron | 25.0% |
| !! | GTTCTTGTTTACATAATTAC+GGG | + | chr5_3:64026358-64026377 | Msa0824600:intron | 25.0% |
| !! | GTTCGTTTGTTAAATCATTT+AGG | + | chr5_3:64026515-64026534 | Msa0824600:CDS | 25.0% |
| TGTTTACTAATAGATGGATG+AGG | + | chr5_3:64025958-64025977 | Msa0824600:CDS | 30.0% | |
| GCAAAATAAGAAAGACTGAA+AGG | - | chr5_3:64026053-64026072 | None:intergenic | 30.0% | |
| !!! | AGTTTTTTGTCCAACGAAAA+AGG | + | chr5_3:64026162-64026181 | Msa0824600:intron | 30.0% |
| !!! | GTTTTTTGTCCAACGAAAAA+GGG | + | chr5_3:64026163-64026182 | Msa0824600:intron | 30.0% |
| !!! | TTTTTTGTCCAACGAAAAAG+GGG | + | chr5_3:64026164-64026183 | Msa0824600:intron | 30.0% |
| ACTGAATTTACATAACTGGA+AGG | - | chr5_3:64026275-64026294 | None:intergenic | 30.0% | |
| ! | ATTTAGAGTACATGCTCATT+TGG | + | chr5_3:64026336-64026355 | Msa0824600:intron | 30.0% |
| !!! | TTTGTTTGCTTGTTTTGTTC+AGG | + | chr5_3:64026384-64026403 | Msa0824600:intron | 30.0% |
| !! | TAGCATAATAACGGATAAGA+TGG | - | chr5_3:64026478-64026497 | None:intergenic | 30.0% |
| TCTTATCCGTTATTATGCTA+TGG | + | chr5_3:64026478-64026497 | Msa0824600:CDS | 30.0% | |
| CTAGAAAGGTGATATGGTAA+AGG | - | chr5_3:64025893-64025912 | None:intergenic | 35.0% | |
| CCATCTATTAGTAAACACTG+TGG | - | chr5_3:64025955-64025974 | None:intergenic | 35.0% | |
| CCACAGTGTTTACTAATAGA+TGG | + | chr5_3:64025952-64025971 | Msa0824600:CDS | 35.0% | |
| TACTAATAGATGGATGAGGA+AGG | + | chr5_3:64025962-64025981 | Msa0824600:CDS | 35.0% | |
| GAATCAAAAGTAGCGATGTT+TGG | + | chr5_3:64025997-64026016 | Msa0824600:intron | 35.0% | |
| TCAGATGCAGAGAAACATAT+TGG | - | chr5_3:64026117-64026136 | None:intergenic | 35.0% | |
| AAGATGGAAGATAAGAGGAT+CGG | - | chr5_3:64026462-64026481 | None:intergenic | 35.0% | |
| AGCTTGCCATAGCATAATAA+CGG | - | chr5_3:64026487-64026506 | None:intergenic | 35.0% | |
| ATGATTTAACAAACGAACGC+AGG | - | chr5_3:64026513-64026532 | None:intergenic | 35.0% | |
| GCTGTTTGGGAACTAGTTAA+TGG | + | chr5_3:64025864-64025883 | Msa0824600:CDS | 40.0% | |
| !! | ACCATATCACCTTTCTAGCT+AGG | + | chr5_3:64025895-64025914 | Msa0824600:CDS | 40.0% |
| TCCTAGCTAGAAAGGTGATA+TGG | - | chr5_3:64025899-64025918 | None:intergenic | 40.0% | |
| ATCAGCATTCCTAGCTAGAA+AGG | - | chr5_3:64025907-64025926 | None:intergenic | 40.0% | |
| ATAGATGGATGAGGAAGGTT+CGG | + | chr5_3:64025967-64025986 | Msa0824600:intron | 40.0% | |
| GCTCTCAAGAATCAAGGTAA+AGG | - | chr5_3:64026306-64026325 | None:intergenic | 40.0% | |
| TAGAAGGCTCTCAAGAATCA+AGG | - | chr5_3:64026312-64026331 | None:intergenic | 40.0% | |
| !!! | CTTGTTTTGTTCAGGTACGT+TGG | + | chr5_3:64026392-64026411 | Msa0824600:intron | 40.0% |
| CGGATAAGATGGAAGATAAG+AGG | - | chr5_3:64026467-64026486 | None:intergenic | 40.0% | |
| GTCCAACGAAAAAGGGGATA+AGG | + | chr5_3:64026170-64026189 | Msa0824600:intron | 45.0% | |
| !! | AGCCTTATCCCCTTTTTCGT+TGG | - | chr5_3:64026175-64026194 | None:intergenic | 45.0% |
| ! | CGAGCTGCTAGATTAGGTTT+TGG | + | chr5_3:64026424-64026443 | Msa0824600:CDS | 45.0% |
| ATGAGGAAGGTTCGGAGAGT+CGG | + | chr5_3:64025975-64025994 | Msa0824600:intron | 50.0% | |
| TCACTGCGAGCTGCTAGATT+AGG | + | chr5_3:64026418-64026437 | Msa0824600:CDS | 50.0% | |
| AAGGCTAACCTCCCATGCAG+TGG | + | chr5_3:64026189-64026208 | Msa0824600:intron | 55.0% | |
| AGGCTAACCTCCCATGCAGT+GGG | + | chr5_3:64026190-64026209 | Msa0824600:intron | 55.0% | |
| AGCTAACACCCCCACTGCAT+GGG | - | chr5_3:64026203-64026222 | None:intergenic | 55.0% | |
| TAGCTAACACCCCCACTGCA+TGG | - | chr5_3:64026204-64026223 | None:intergenic | 55.0% | |
| GGCTAACCTCCCATGCAGTG+GGG | + | chr5_3:64026191-64026210 | Msa0824600:intron | 60.0% | |
| GCTAACCTCCCATGCAGTGG+GGG | + | chr5_3:64026192-64026211 | Msa0824600:intron | 60.0% | |
| TAACACCCCCACTGCATGGG+AGG | - | chr5_3:64026200-64026219 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_3 | gene | 64025861 | 64026549 | 64025861 | ID=Msa0824600;Name=Msa0824600 |
| chr5_3 | mRNA | 64025861 | 64026549 | 64025861 | ID=Msa0824600-mRNA-1;Parent=Msa0824600;Name=Msa0824600-mRNA-1;_AED=0.64;_eAED=0.65;_QI=0|0|0|0.5|1|1|2|0|88 |
| chr5_3 | exon | 64025861 | 64025983 | 64025861 | ID=Msa0824600-mRNA-1:exon:19974;Parent=Msa0824600-mRNA-1 |
| chr5_3 | exon | 64026406 | 64026549 | 64026406 | ID=Msa0824600-mRNA-1:exon:19975;Parent=Msa0824600-mRNA-1 |
| chr5_3 | CDS | 64025861 | 64025983 | 64025861 | ID=Msa0824600-mRNA-1:cds;Parent=Msa0824600-mRNA-1 |
| chr5_3 | CDS | 64026406 | 64026549 | 64026406 | ID=Msa0824600-mRNA-1:cds;Parent=Msa0824600-mRNA-1 |
| Gene Sequence |
| Protein sequence |
