Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0251320 | XP_039686407.1 | 46.429 | 84 | 45 | 0 | 2 | 85 | 46 | 129 | 8.32e-21 | 94.4 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0251320 | A0A072VU07 | 46.429 | 84 | 45 | 0 | 2 | 85 | 46 | 129 | 3.97e-21 | 94.4 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002230 | Msa0251320 | 0.801989 | 6.938721e-49 | -8.615850e-47 |
| Msa0015400 | Msa0251320 | 0.838851 | 2.248949e-57 | -8.615850e-47 |
| Msa0017070 | Msa0251320 | 0.809070 | 2.268888e-50 | -8.615850e-47 |
| Msa0018650 | Msa0251320 | 0.810635 | 1.045057e-50 | -8.615850e-47 |
| Msa0039560 | Msa0251320 | 0.800688 | 1.281912e-48 | -8.615850e-47 |
| Msa0042920 | Msa0251320 | 0.807592 | 4.687661e-50 | -8.615850e-47 |
| Msa0044260 | Msa0251320 | 0.810028 | 1.413094e-50 | -8.615850e-47 |
| Msa0062860 | Msa0251320 | 0.819881 | 9.201663e-53 | -8.615850e-47 |
| Msa0064970 | Msa0251320 | 0.801184 | 1.014833e-48 | -8.615850e-47 |
| Msa0075880 | Msa0251320 | 0.810368 | 1.193236e-50 | -8.615850e-47 |
| Msa0076220 | Msa0251320 | 0.812445 | 4.224834e-51 | -8.615850e-47 |
| Msa0099210 | Msa0251320 | 0.811571 | 6.551757e-51 | -8.615850e-47 |
| Msa0105070 | Msa0251320 | 0.809429 | 1.900699e-50 | -8.615850e-47 |
| Msa0107580 | Msa0251320 | 0.823410 | 1.406307e-53 | -8.615850e-47 |
| Msa0112590 | Msa0251320 | 0.801072 | 1.070076e-48 | -8.615850e-47 |
| Msa0114060 | Msa0251320 | 0.804039 | 2.615885e-49 | -8.615850e-47 |
| Msa0124250 | Msa0251320 | 0.806796 | 6.913639e-50 | -8.615850e-47 |
| Msa0131770 | Msa0251320 | 0.844532 | 7.132435e-59 | -8.615850e-47 |
| Msa0142220 | Msa0251320 | 0.829701 | 4.442021e-55 | -8.615850e-47 |
| Msa0165210 | Msa0251320 | 0.809648 | 1.705196e-50 | -8.615850e-47 |
| Msa0180500 | Msa0251320 | 0.824717 | 6.939197e-54 | -8.615850e-47 |
| Msa0188460 | Msa0251320 | 0.807852 | 4.128530e-50 | -8.615850e-47 |
| Msa0198910 | Msa0251320 | 0.832760 | 7.863824e-56 | -8.615850e-47 |
| Msa0208090 | Msa0251320 | 0.819459 | 1.148583e-52 | -8.615850e-47 |
| Msa0223010 | Msa0251320 | 0.822022 | 2.959047e-53 | -8.615850e-47 |
| Msa0227480 | Msa0251320 | 0.819136 | 1.360644e-52 | -8.615850e-47 |
| Msa0231000 | Msa0251320 | 0.803915 | 2.776052e-49 | -8.615850e-47 |
| Msa0232850 | Msa0251320 | 0.803592 | 3.238868e-49 | -8.615850e-47 |
| Msa0233080 | Msa0251320 | 0.836506 | 8.990012e-57 | -8.615850e-47 |
| Msa0233300 | Msa0251320 | 0.853079 | 3.029033e-61 | -8.615850e-47 |
| Msa0251320 | Msa0251640 | 0.838207 | 3.298953e-57 | -8.615850e-47 |
| Msa0251320 | Msa0267000 | 0.808277 | 3.351211e-50 | -8.615850e-47 |
| Msa0251320 | Msa0267010 | 0.819265 | 1.271589e-52 | -8.615850e-47 |
| Msa0251320 | Msa0270520 | 0.813297 | 2.748817e-51 | -8.615850e-47 |
| Msa0251320 | Msa0273100 | 0.836774 | 7.682787e-57 | -8.615850e-47 |
| Msa0251320 | Msa0278110 | 0.803236 | 3.838850e-49 | -8.615850e-47 |
| Msa0251320 | Msa0288100 | 0.806751 | 7.066189e-50 | -8.615850e-47 |
| Msa0251320 | Msa0290870 | 0.812149 | 4.903015e-51 | -8.615850e-47 |
| Msa0251320 | Msa0295770 | 0.808087 | 3.679964e-50 | -8.615850e-47 |
| Msa0251320 | Msa0305190 | 0.820447 | 6.826902e-53 | -8.615850e-47 |
| Msa0251320 | Msa0307540 | 0.820458 | 6.786838e-53 | -8.615850e-47 |
| Msa0251320 | Msa0309020 | 0.803469 | 3.435605e-49 | -8.615850e-47 |
| Msa0251320 | Msa0311750 | 0.810527 | 1.102495e-50 | -8.615850e-47 |
| Msa0251320 | Msa0322360 | 0.802546 | 5.329037e-49 | -8.615850e-47 |
| Msa0251320 | Msa0337900 | 0.820907 | 5.352968e-53 | -8.615850e-47 |
| Msa0251320 | Msa0339620 | 0.824285 | 8.769995e-54 | -8.615850e-47 |
| Msa0251320 | Msa0340450 | 0.809791 | 1.589013e-50 | -8.615850e-47 |
| Msa0251320 | Msa0342750 | 0.804631 | 1.968898e-49 | -8.615850e-47 |
| Msa0251320 | Msa0349360 | 0.800209 | 1.604549e-48 | -8.615850e-47 |
| Msa0251320 | Msa0355220 | 0.814657 | 1.377780e-51 | -8.615850e-47 |
| Msa0251320 | Msa0360510 | 0.804015 | 2.645970e-49 | -8.615850e-47 |
| Msa0251320 | Msa0365500 | 0.808765 | 2.637406e-50 | -8.615850e-47 |
| Msa0251320 | Msa0371730 | 0.809099 | 2.237182e-50 | -8.615850e-47 |
| Msa0251320 | Msa0384800 | 0.829916 | 3.937979e-55 | -8.615850e-47 |
| Msa0251320 | Msa0384890 | 0.837223 | 5.900559e-57 | -8.615850e-47 |
| Msa0251320 | Msa0394970 | 0.800965 | 1.125118e-48 | -8.615850e-47 |
| Msa0251320 | Msa0402290 | 0.806450 | 8.177718e-50 | -8.615850e-47 |
| Msa0251320 | Msa0407750 | 0.802467 | 5.532225e-49 | -8.615850e-47 |
| Msa0251320 | Msa0419980 | 0.800462 | 1.424964e-48 | -8.615850e-47 |
| Msa0251320 | Msa0424320 | 0.830885 | 2.282324e-55 | -8.615850e-47 |
| Msa0251320 | Msa0425790 | 0.812135 | 4.937068e-51 | -8.615850e-47 |
| Msa0251320 | Msa0431690 | 0.844077 | 9.448712e-59 | -8.615850e-47 |
| Msa0251320 | Msa0434200 | 0.813523 | 2.451585e-51 | -8.615850e-47 |
| Msa0251320 | Msa0435230 | 0.846608 | 1.951742e-59 | -8.615850e-47 |
| Msa0251320 | Msa0436780 | 0.820728 | 5.884752e-53 | -8.615850e-47 |
| Msa0251320 | Msa0436800 | 0.829865 | 4.053263e-55 | -8.615850e-47 |
| Msa0251320 | Msa0444130 | 0.821293 | 4.360383e-53 | -8.615850e-47 |
| Msa0251320 | Msa0452620 | 0.814291 | 1.660482e-51 | -8.615850e-47 |
| Msa0251320 | Msa0452900 | 0.810590 | 1.068692e-50 | -8.615850e-47 |
| Msa0251320 | Msa0453120 | 0.822040 | 2.929998e-53 | -8.615850e-47 |
| Msa0251320 | Msa0466120 | 0.818344 | 2.058798e-52 | -8.615850e-47 |
| Msa0251320 | Msa0471380 | 0.809880 | 1.520583e-50 | -8.615850e-47 |
| Msa0251320 | Msa0479340 | 0.857118 | 2.028590e-62 | -8.615850e-47 |
| Msa0251320 | Msa0490140 | 0.803384 | 3.577683e-49 | -8.615850e-47 |
| Msa0251320 | Msa0493000 | 0.822407 | 2.408936e-53 | -8.615850e-47 |
| Msa0251320 | Msa0506270 | 0.820011 | 8.591069e-53 | -8.615850e-47 |
| Msa0251320 | Msa0512750 | 0.800596 | 1.338306e-48 | -8.615850e-47 |
| Msa0251320 | Msa0514320 | 0.802115 | 6.537448e-49 | -8.615850e-47 |
| Msa0251320 | Msa0523940 | 0.839970 | 1.152216e-57 | -8.615850e-47 |
| Msa0251320 | Msa0529040 | 0.802857 | 4.597874e-49 | -8.615850e-47 |
| Msa0251320 | Msa0532350 | 0.800439 | 1.440370e-48 | -8.615850e-47 |
| Msa0251320 | Msa0541130 | 0.816592 | 5.108209e-52 | -8.615850e-47 |
| Msa0251320 | Msa0545700 | 0.822170 | 2.734030e-53 | -8.615850e-47 |
| Msa0251320 | Msa0562440 | 0.806254 | 8.993692e-50 | -8.615850e-47 |
| Msa0251320 | Msa0585230 | 0.823144 | 1.622649e-53 | -8.615850e-47 |
| Msa0251320 | Msa0594560 | 0.822906 | 1.843599e-53 | -8.615850e-47 |
| Msa0251320 | Msa0598780 | 0.812100 | 5.024367e-51 | -8.615850e-47 |
| Msa0251320 | Msa0600700 | 0.822239 | 2.634711e-53 | -8.615850e-47 |
| Msa0251320 | Msa0604350 | 0.811684 | 6.188423e-51 | -8.615850e-47 |
| Msa0251320 | Msa0610800 | 0.803687 | 3.095541e-49 | -8.615850e-47 |
| Msa0251320 | Msa0620960 | 0.804316 | 2.290253e-49 | -8.615850e-47 |
| Msa0251320 | Msa0636170 | 0.800951 | 1.132482e-48 | -8.615850e-47 |
| Msa0251320 | Msa0639610 | 0.810518 | 1.107835e-50 | -8.615850e-47 |
| Msa0251320 | Msa0645300 | 0.815368 | 9.583783e-52 | -8.615850e-47 |
| Msa0251320 | Msa0650630 | 0.849499 | 3.109250e-60 | -8.615850e-47 |
| Msa0251320 | Msa0661870 | 0.807798 | 4.239047e-50 | -8.615850e-47 |
| Msa0251320 | Msa0663240 | 0.816582 | 5.134596e-52 | -8.615850e-47 |
| Msa0251320 | Msa0664950 | 0.804463 | 2.134127e-49 | -8.615850e-47 |
| Msa0251320 | Msa0669410 | 0.801154 | 1.029247e-48 | -8.615850e-47 |
| Msa0251320 | Msa0672690 | 0.808219 | 3.448918e-50 | -8.615850e-47 |
| Msa0251320 | Msa0673450 | 0.808424 | 3.117829e-50 | -8.615850e-47 |
| Msa0251320 | Msa0673460 | 0.801204 | 1.005204e-48 | -8.615850e-47 |
| Msa0251320 | Msa0676080 | 0.818210 | 2.207428e-52 | -8.615850e-47 |
| Msa0251320 | Msa0681270 | 0.802173 | 6.361841e-49 | -8.615850e-47 |
| Msa0251320 | Msa0688480 | 0.817138 | 3.852181e-52 | -8.615850e-47 |
| Msa0251320 | Msa0694370 | 0.815078 | 1.111564e-51 | -8.615850e-47 |
| Msa0251320 | Msa0697060 | 0.802504 | 5.437331e-49 | -8.615850e-47 |
| Msa0251320 | Msa0701010 | 0.832186 | 1.091249e-55 | -8.615850e-47 |
| Msa0251320 | Msa0703120 | 0.815387 | 9.489975e-52 | -8.615850e-47 |
| Msa0251320 | Msa0703780 | 0.809218 | 2.109507e-50 | -8.615850e-47 |
| Msa0251320 | Msa0725850 | 0.816228 | 6.161294e-52 | -8.615850e-47 |
| Msa0251320 | Msa0726140 | 0.828415 | 9.104114e-55 | -8.615850e-47 |
| Msa0251320 | Msa0729800 | 0.813835 | 2.093156e-51 | -8.615850e-47 |
| Msa0251320 | Msa0731550 | 0.810610 | 1.058139e-50 | -8.615850e-47 |
| Msa0251320 | Msa0731940 | 0.819001 | 1.460217e-52 | -8.615850e-47 |
| Msa0251320 | Msa0732540 | 0.804274 | 2.336809e-49 | -8.615850e-47 |
| Msa0251320 | Msa0735170 | 0.806130 | 9.549750e-50 | -8.615850e-47 |
| Msa0251320 | Msa0743810 | 0.813841 | 2.086675e-51 | -8.615850e-47 |
| Msa0251320 | Msa0745060 | 0.818318 | 2.086481e-52 | -8.615850e-47 |
| Msa0251320 | Msa0753720 | 0.811727 | 6.057747e-51 | -8.615850e-47 |
| Msa0251320 | Msa0755180 | 0.802886 | 4.533757e-49 | -8.615850e-47 |
| Msa0251320 | Msa0756320 | 0.807959 | 3.917049e-50 | -8.615850e-47 |
| Msa0251320 | Msa0760130 | 0.802817 | 4.685930e-49 | -8.615850e-47 |
| Msa0251320 | Msa0766630 | 0.852039 | 5.994259e-61 | -8.615850e-47 |
| Msa0251320 | Msa0767720 | 0.807562 | 4.758231e-50 | -8.615850e-47 |
| Msa0251320 | Msa0767760 | 0.802550 | 5.319842e-49 | -8.615850e-47 |
| Msa0251320 | Msa0768290 | 0.844826 | 5.943509e-59 | -8.615850e-47 |
| Msa0251320 | Msa0768310 | 0.801912 | 7.197407e-49 | -8.615850e-47 |
| Msa0251320 | Msa0768370 | 0.850120 | 2.085702e-60 | -8.615850e-47 |
| Msa0251320 | Msa0783160 | 0.810337 | 1.212008e-50 | -8.615850e-47 |
| Msa0251320 | Msa0784290 | 0.862285 | 5.646000e-64 | -8.615850e-47 |
| Msa0251320 | Msa0784300 | 0.823915 | 1.071286e-53 | -8.615850e-47 |
| Msa0251320 | Msa0810220 | 0.824844 | 6.477835e-54 | -8.615850e-47 |
| Msa0251320 | Msa0811080 | 0.808550 | 2.931336e-50 | -8.615850e-47 |
| Msa0251320 | Msa0820850 | 0.817142 | 3.844158e-52 | -8.615850e-47 |
| Msa0251320 | Msa0824590 | 0.847000 | 1.524897e-59 | -8.615850e-47 |
| Msa0251320 | Msa0824600 | 0.827496 | 1.515282e-54 | -8.615850e-47 |
| Msa0251320 | Msa0825860 | 0.818497 | 1.900413e-52 | -8.615850e-47 |
| Msa0251320 | Msa0832340 | 0.824568 | 7.522817e-54 | -8.615850e-47 |
| Msa0251320 | Msa0833290 | 0.815150 | 1.071495e-51 | -8.615850e-47 |
| Msa0251320 | Msa0844490 | 0.846305 | 2.360389e-59 | -8.615850e-47 |
| Msa0251320 | Msa0844500 | 0.824009 | 1.017931e-53 | -8.615850e-47 |
| Msa0251320 | Msa0845930 | 0.802427 | 5.638718e-49 | -8.615850e-47 |
| Msa0251320 | Msa0846330 | 0.817173 | 3.781965e-52 | -8.615850e-47 |
| Msa0251320 | Msa0846350 | 0.807461 | 4.996919e-50 | -8.615850e-47 |
| Msa0251320 | Msa0849030 | 0.813982 | 1.943012e-51 | -8.615850e-47 |
| Msa0251320 | Msa0853610 | 0.800832 | 1.197875e-48 | -8.615850e-47 |
| Msa0251320 | Msa0857640 | 0.816100 | 6.581893e-52 | -8.615850e-47 |
| Msa0251320 | Msa0858980 | 0.833118 | 6.408587e-56 | -8.615850e-47 |
| Msa0251320 | Msa0861130 | 0.817277 | 3.584671e-52 | -8.615850e-47 |
| Msa0251320 | Msa0864070 | 0.853881 | 1.781665e-61 | -8.615850e-47 |
| Msa0251320 | Msa0877250 | 0.870354 | 1.555301e-66 | -8.615850e-47 |
| Msa0251320 | Msa0885280 | 0.813062 | 3.094853e-51 | -8.615850e-47 |
| Msa0251320 | Msa0885290 | 0.820444 | 6.838734e-53 | -8.615850e-47 |
| Msa0251320 | Msa0888130 | 0.817015 | 4.104247e-52 | -8.615850e-47 |
| Msa0251320 | Msa0897330 | 0.808828 | 2.556105e-50 | -8.615850e-47 |
| Msa0251320 | Msa0899430 | 0.867932 | 9.503149e-66 | -8.615850e-47 |
| Msa0251320 | Msa0899450 | 0.853274 | 2.662435e-61 | -8.615850e-47 |
| Msa0251320 | Msa0907070 | 0.825622 | 4.240926e-54 | -8.615850e-47 |
| Msa0251320 | Msa0907260 | 0.833135 | 6.345475e-56 | -8.615850e-47 |
| Msa0251320 | Msa0914760 | 0.848034 | 7.923428e-60 | -8.615850e-47 |
| Msa0251320 | Msa0924050 | 0.816005 | 6.910028e-52 | -8.615850e-47 |
| Msa0251320 | Msa0925250 | 0.826264 | 2.984683e-54 | -8.615850e-47 |
| Msa0251320 | Msa0925290 | 0.827221 | 1.763658e-54 | -8.615850e-47 |
| Msa0251320 | Msa0927290 | 0.808218 | 3.449641e-50 | -8.615850e-47 |
| Msa0251320 | Msa0927380 | 0.846151 | 2.600951e-59 | -8.615850e-47 |
| Msa0251320 | Msa0935910 | 0.806374 | 8.485381e-50 | -8.615850e-47 |
| Msa0251320 | Msa0936300 | 0.810884 | 9.229801e-51 | -8.615850e-47 |
| Msa0251320 | Msa0947660 | 0.800388 | 1.475355e-48 | -8.615850e-47 |
| Msa0251320 | Msa0952720 | 0.819537 | 1.102353e-52 | -8.615850e-47 |
| Msa0251320 | Msa0953120 | 0.830559 | 2.742801e-55 | -8.615850e-47 |
| Msa0251320 | Msa0954910 | 0.828816 | 7.282783e-55 | -8.615850e-47 |
| Msa0251320 | Msa0956270 | 0.832656 | 8.345716e-56 | -8.615850e-47 |
| Msa0251320 | Msa0957860 | 0.800878 | 1.172216e-48 | -8.615850e-47 |
| Msa0251320 | Msa0957960 | 0.801485 | 8.804919e-49 | -8.615850e-47 |
| Msa0251320 | Msa0958550 | 0.861963 | 7.087145e-64 | -8.615850e-47 |
| Msa0251320 | Msa0964900 | 0.846835 | 1.692128e-59 | -8.615850e-47 |
| Msa0251320 | Msa0966750 | 0.831249 | 1.858082e-55 | -8.615850e-47 |
| Msa0251320 | Msa0967280 | 0.804271 | 2.340405e-49 | -8.615850e-47 |
| Msa0251320 | Msa0969260 | 0.805399 | 1.360431e-49 | -8.615850e-47 |
| Msa0251320 | Msa0969450 | 0.827453 | 1.551771e-54 | -8.615850e-47 |
| Msa0251320 | Msa0969520 | 0.830136 | 3.480009e-55 | -8.615850e-47 |
| Msa0251320 | Msa0973100 | 0.810234 | 1.275478e-50 | -8.615850e-47 |
| Msa0251320 | Msa0974080 | 0.819287 | 1.257371e-52 | -8.615850e-47 |
| Msa0251320 | Msa0976670 | 0.811820 | 5.780908e-51 | -8.615850e-47 |
| Msa0251320 | Msa0985560 | 0.807804 | 4.226739e-50 | -8.615850e-47 |
| Msa0251320 | Msa0989060 | 0.824542 | 7.629956e-54 | -8.615850e-47 |
| Msa0251320 | Msa0991830 | 0.802246 | 6.143967e-49 | -8.615850e-47 |
| Msa0251320 | Msa0998690 | 0.815247 | 1.019599e-51 | -8.615850e-47 |
| Msa0251320 | Msa0999220 | 0.811890 | 5.581630e-51 | -8.615850e-47 |
| Msa0251320 | Msa1000880 | 0.800668 | 1.293945e-48 | -8.615850e-47 |
| Msa0251320 | Msa1000890 | 0.817818 | 2.707400e-52 | -8.615850e-47 |
| Msa0251320 | Msa1000900 | 0.809250 | 2.076170e-50 | -8.615850e-47 |
| Msa0251320 | Msa1014540 | 0.842296 | 2.820726e-58 | -8.615850e-47 |
| Msa0251320 | Msa1014990 | 0.802113 | 6.545154e-49 | -8.615850e-47 |
| Msa0251320 | Msa1015490 | 0.834783 | 2.454150e-56 | -8.615850e-47 |
| Msa0251320 | Msa1016280 | 0.825404 | 4.774556e-54 | -8.615850e-47 |
| Msa0251320 | Msa1023050 | 0.808465 | 3.055978e-50 | -8.615850e-47 |
| Msa0251320 | Msa1025360 | 0.820549 | 6.469488e-53 | -8.615850e-47 |
| Msa0251320 | Msa1025370 | 0.819364 | 1.207309e-52 | -8.615850e-47 |
| Msa0251320 | Msa1028230 | 0.843677 | 1.209836e-58 | -8.615850e-47 |
| Msa0251320 | Msa1039800 | 0.811606 | 6.435109e-51 | -8.615850e-47 |
| Msa0251320 | Msa1044830 | 0.816019 | 6.861791e-52 | -8.615850e-47 |
| Msa0251320 | Msa1044840 | 0.825330 | 4.972391e-54 | -8.615850e-47 |
| Msa0251320 | Msa1060840 | 0.848422 | 6.190491e-60 | -8.615850e-47 |
| Msa0251320 | Msa1075220 | -0.810809 | 9.581713e-51 | -8.615850e-47 |
| Msa0251320 | Msa1075540 | 0.808792 | 2.602623e-50 | -8.615850e-47 |
| Msa0251320 | Msa1075650 | 0.807672 | 4.507304e-50 | -8.615850e-47 |
| Msa0251320 | Msa1082580 | 0.807644 | 4.571282e-50 | -8.615850e-47 |
| Msa0251320 | Msa1085740 | 0.809929 | 1.483605e-50 | -8.615850e-47 |
| Msa0251320 | Msa1092990 | 0.810504 | 1.115231e-50 | -8.615850e-47 |
| Msa0251320 | Msa1099970 | 0.804537 | 2.060093e-49 | -8.615850e-47 |
| Msa0251320 | Msa1100980 | 0.803693 | 3.086620e-49 | -8.615850e-47 |
| Msa0251320 | Msa1109440 | 0.823760 | 1.164599e-53 | -8.615850e-47 |
| Msa0251320 | Msa1112300 | 0.833238 | 5.980728e-56 | -8.615850e-47 |
| Msa0251320 | Msa1113170 | 0.811072 | 8.407179e-51 | -8.615850e-47 |
| Msa0251320 | Msa1114030 | 0.812039 | 5.181862e-51 | -8.615850e-47 |
| Msa0251320 | Msa1120610 | 0.808274 | 3.356682e-50 | -8.615850e-47 |
| Msa0251320 | Msa1121480 | 0.831643 | 1.486131e-55 | -8.615850e-47 |
| Msa0251320 | Msa1121490 | 0.842873 | 1.981919e-58 | -8.615850e-47 |
| Msa0251320 | Msa1136090 | 0.835816 | 1.346562e-56 | -8.615850e-47 |
| Msa0251320 | Msa1137570 | 0.805421 | 1.345814e-49 | -8.615850e-47 |
| Msa0251320 | Msa1137690 | 0.818239 | 2.174036e-52 | -8.615850e-47 |
| Msa0251320 | Msa1149360 | 0.800614 | 1.326750e-48 | -8.615850e-47 |
| Msa0251320 | Msa1156020 | 0.814154 | 1.780397e-51 | -8.615850e-47 |
| Msa0251320 | Msa1162550 | -0.812782 | 3.564337e-51 | -8.615850e-47 |
| Msa0251320 | Msa1173920 | 0.806726 | 7.153138e-50 | -8.615850e-47 |
| Msa0251320 | Msa1174040 | 0.808590 | 2.874412e-50 | -8.615850e-47 |
| Msa0251320 | Msa1179770 | 0.815382 | 9.515937e-52 | -8.615850e-47 |
| Msa0251320 | Msa1182090 | 0.804085 | 2.558142e-49 | -8.615850e-47 |
| Msa0251320 | Msa1184420 | 0.831530 | 1.584743e-55 | -8.615850e-47 |
| Msa0251320 | Msa1187950 | 0.807454 | 5.015049e-50 | -8.615850e-47 |
| Msa0251320 | Msa1188990 | 0.802127 | 6.500133e-49 | -8.615850e-47 |
| Msa0251320 | Msa1218000 | 0.828974 | 6.669052e-55 | -8.615850e-47 |
| Msa0251320 | Msa1228590 | 0.823512 | 1.331116e-53 | -8.615850e-47 |
| Msa0251320 | Msa1230430 | 0.803406 | 3.539836e-49 | -8.615850e-47 |
| Msa0251320 | Msa1244250 | 0.802723 | 4.899559e-49 | -8.615850e-47 |
| Msa0251320 | Msa1248310 | 0.808744 | 2.664237e-50 | -8.615850e-47 |
| Msa0251320 | Msa1248370 | 0.802806 | 4.711320e-49 | -8.615850e-47 |
| Msa0251320 | Msa1249490 | 0.810429 | 1.157784e-50 | -8.615850e-47 |
| Msa0251320 | Msa1253000 | 0.823792 | 1.144581e-53 | -8.615850e-47 |
| Msa0251320 | Msa1269670 | 0.810525 | 1.103797e-50 | -8.615850e-47 |
| Msa0251320 | Msa1270230 | 0.814680 | 1.361912e-51 | -8.615850e-47 |
| Msa0251320 | Msa1270240 | 0.808057 | 3.734530e-50 | -8.615850e-47 |
| Msa0251320 | Msa1273230 | 0.827761 | 1.308436e-54 | -8.615850e-47 |
| Msa0251320 | Msa1276890 | 0.818745 | 1.669791e-52 | -8.615850e-47 |
| Msa0251320 | Msa1277660 | 0.809281 | 2.044585e-50 | -8.615850e-47 |
| Msa0251320 | Msa1283330 | 0.824378 | 8.338696e-54 | -8.615850e-47 |
| Msa0251320 | Msa1284680 | 0.859141 | 5.077870e-63 | -8.615850e-47 |
| Msa0251320 | Msa1285930 | 0.817294 | 3.553899e-52 | -8.615850e-47 |
| Msa0251320 | Msa1286800 | 0.814074 | 1.854025e-51 | -8.615850e-47 |
| Msa0251320 | Msa1287810 | 0.805947 | 1.043572e-49 | -8.615850e-47 |
| Msa0251320 | Msa1288560 | 0.813342 | 2.686880e-51 | -8.615850e-47 |
| Msa0251320 | Msa1307890 | 0.845581 | 3.713837e-59 | -8.615850e-47 |
| Msa0251320 | Msa1310120 | 0.803334 | 3.663240e-49 | -8.615850e-47 |
| Msa0251320 | Msa1342840 | 0.810356 | 1.200858e-50 | -8.615850e-47 |
| Msa0251320 | Msa1353470 | 0.821288 | 4.371420e-53 | -8.615850e-47 |
| Msa0251320 | Msa1366810 | 0.822097 | 2.842316e-53 | -8.615850e-47 |
| Msa0251320 | Msa1373030 | 0.811315 | 7.445070e-51 | -8.615850e-47 |
| Msa0251320 | Msa1386330 | 0.824993 | 5.970888e-54 | -8.615850e-47 |
| Msa0251320 | Msa1387280 | 0.807814 | 4.204998e-50 | -8.615850e-47 |
| Msa0251320 | Msa1388510 | 0.806021 | 1.007062e-49 | -8.615850e-47 |
| Msa0251320 | Msa1397860 | 0.810165 | 1.320346e-50 | -8.615850e-47 |
| Msa0251320 | Msa1400720 | 0.834998 | 2.167427e-56 | -8.615850e-47 |
| Msa0251320 | Msa1402790 | 0.821699 | 3.514901e-53 | -8.615850e-47 |
| Msa0251320 | Msa1403480 | 0.835533 | 1.587685e-56 | -8.615850e-47 |
| Msa0251320 | Msa1404000 | 0.821644 | 3.618376e-53 | -8.615850e-47 |
| Msa0251320 | Msa1408780 | 0.804383 | 2.217703e-49 | -8.615850e-47 |
| Msa0251320 | Msa1410680 | 0.821917 | 3.128197e-53 | -8.615850e-47 |
| Msa0251320 | Msa1411020 | 0.827316 | 1.673293e-54 | -8.615850e-47 |
| Msa0251320 | Msa1415310 | 0.818296 | 2.111364e-52 | -8.615850e-47 |
| Msa0251320 | Msa1420490 | 0.821113 | 4.796937e-53 | -8.615850e-47 |
| Msa0251320 | Msa1420820 | 0.827917 | 1.200068e-54 | -8.615850e-47 |
| Msa0251320 | Msa1422180 | 0.812188 | 4.807500e-51 | -8.615850e-47 |
| Msa0251320 | Msa1423390 | 0.822227 | 2.651563e-53 | -8.615850e-47 |
| Msa0251320 | Msa1424290 | 0.822381 | 2.442297e-53 | -8.615850e-47 |
| Msa0251320 | Msa1427230 | 0.823728 | 1.184691e-53 | -8.615850e-47 |
| Msa0251320 | Msa1433120 | 0.811881 | 5.608855e-51 | -8.615850e-47 |
| Msa0251320 | Msa1434350 | 0.824462 | 7.967768e-54 | -8.615850e-47 |
| Msa0251320 | Msa1439320 | 0.824456 | 7.991840e-54 | -8.615850e-47 |
| Msa0251320 | Msa1440370 | 0.824892 | 6.309414e-54 | -8.615850e-47 |
| Msa0251320 | Msa1440810 | 0.826177 | 3.130401e-54 | -8.615850e-47 |
| Msa0251320 | Msa1443060 | 0.821984 | 3.018659e-53 | -8.615850e-47 |
| Msa0251320 | Msa1451620 | -0.807116 | 5.913462e-50 | -8.615850e-47 |
| Msa0251320 | Msa1455720 | 0.801589 | 8.384345e-49 | -8.615850e-47 |
| Msa0251320 | Msa1460830 | 0.824473 | 7.921197e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0251320 | MtrunA17_Chr6g0473651 | 52.500 | 80 | 38 | 0 | 10 | 89 | 225 | 304 | 4.44e-24 | 93.6 |
| Msa0251320 | MtrunA17_Chr6g0473661 | 52.500 | 80 | 38 | 0 | 10 | 89 | 256 | 335 | 1.01e-23 | 93.2 |
| Msa0251320 | MtrunA17_Chr4g0054601 | 53.704 | 54 | 25 | 0 | 29 | 82 | 7 | 60 | 2.09e-14 | 63.2 |
| Msa0251320 | MtrunA17_Chr1g0206471 | 30.682 | 88 | 61 | 0 | 1 | 88 | 43 | 130 | 3.29e-14 | 65.5 |
| Msa0251320 | MtrunA17_Chr7g0270401 | 31.818 | 88 | 60 | 0 | 1 | 88 | 42 | 129 | 4.62e-13 | 62.4 |
| Msa0251320 | MtrunA17_Chr1g0193281 | 34.667 | 75 | 49 | 0 | 1 | 75 | 42 | 116 | 5.74e-13 | 61.2 |
| Msa0251320 | MtrunA17_Chr1g0207921 | 38.095 | 63 | 39 | 0 | 13 | 75 | 53 | 115 | 3.92e-12 | 58.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 105 sgRNAs with CRISPR-Local
Find 299 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACCAAATCCGATATCGTTTC+AGG | 0.201292 | 2_2:+40845378 | Msa0251320:three_prime_UTR |
| TACTTTCGGCATGGTTGGTC+TGG | 0.226238 | 2_2:+40845135 | Msa0251320:CDS |
| CACGCTTTGTATGGCGTGTC+TGG | 0.277267 | 2_2:+40846023 | Msa0251320:three_prime_UTR |
| TACCCAAGGTTGCTCTTTGC+TGG | 0.291281 | 2_2:-40845843 | None:intergenic |
| CTATCTGTTGATTTACCCTT+AGG | 0.310270 | 2_2:+40845652 | Msa0251320:three_prime_UTR |
| ACACATAGTAGCAAAGAAAA+TGG | 0.313078 | 2_2:-40845983 | None:intergenic |
| GAGAAACTCTCGTCTCTTAG+AGG | 0.319133 | 2_2:-40844398 | None:intergenic |
| TCCTGAAACGATATCGGATT+TGG | 0.320399 | 2_2:-40845379 | None:intergenic |
| AAAACGCCTTCTCTCTAAAC+TGG | 0.358097 | 2_2:+40840007 | None:intergenic |
| TATAGACACCAGCAGAAGAT+TGG | 0.382381 | 2_2:-40845217 | None:intergenic |
| TCGAGCTGCGATTAAATTCC+GGG | 0.392202 | 2_2:+40840559 | Msa0251320:five_prime_UTR |
| GGAGTGACCCTGCACAAATA+TGG | 0.393447 | 2_2:+40840804 | Msa0251320:five_prime_UTR |
| AGAATGGGAAAATTTACTTT+CGG | 0.395449 | 2_2:+40845121 | Msa0251320:CDS |
| TCGTGATGGTCAAACCAATT+TGG | 0.397359 | 2_2:+40845323 | Msa0251320:three_prime_UTR |
| ACTTTCGGCATGGTTGGTCT+GGG | 0.402896 | 2_2:+40845136 | Msa0251320:CDS |
| GTTAAGATTGAAAAGAAGAA+TGG | 0.409641 | 2_2:+40845105 | Msa0251320:CDS |
| TATCAAGTTTGCTGCTCATC+AGG | 0.413282 | 2_2:+40845692 | Msa0251320:three_prime_UTR |
| ATCGAGCTGCGATTAAATTC+CGG | 0.419067 | 2_2:+40840558 | Msa0251320:five_prime_UTR |
| AAGGGCCACACCATACTCTT+TGG | 0.424346 | 2_2:-40845037 | None:intergenic |
| TTTAACAGACACGCTTTGTA+TGG | 0.429281 | 2_2:+40846014 | Msa0251320:three_prime_UTR |
| TGATTTGCAGTTTGTGATTG+TGG | 0.434204 | 2_2:+40845593 | Msa0251320:three_prime_UTR |
| CAGTCGTATTACTACTTGTC+GGG | 0.435083 | 2_2:-40845269 | None:intergenic |
| TACCTTGAATGATGAAGAAA+AGG | 0.437167 | 2_2:-40840077 | None:intergenic |
| TTATGATGATGATCTTAAAC+AGG | 0.440099 | 2_2:+40840616 | Msa0251320:five_prime_UTR |
| TTTAATCGCAGCTCGATCAT+AGG | 0.441826 | 2_2:-40840552 | None:intergenic |
| CCCAACGGCCATATTTGTGC+AGG | 0.442075 | 2_2:-40840812 | None:intergenic |
| ATAGACACCAGCAGAAGATT+GGG | 0.445288 | 2_2:-40845216 | None:intergenic |
| TCTGCAAGATCGGAGGTGAC+TGG | 0.445361 | 2_2:+40845628 | Msa0251320:three_prime_UTR |
| GGCGAAGAATTTATCGAAAG+AGG | 0.454175 | 2_2:+40840719 | Msa0251320:intron |
| TAGTCAGCTAACACTTTCTT+CGG | 0.457185 | 2_2:-40845539 | None:intergenic |
| CTGTTGATTTACCCTTAGGT+TGG | 0.459358 | 2_2:+40845656 | Msa0251320:three_prime_UTR |
| ATCAACATATGTCGGGAAAG+TGG | 0.468005 | 2_2:-40845301 | None:intergenic |
| ATTCCCATGCACATTCTCAA+TGG | 0.469357 | 2_2:-40845784 | None:intergenic |
| TTCCCATGCACATTCTCAAT+GGG | 0.470871 | 2_2:-40845783 | None:intergenic |
| GATTTGCAGTTTGTGATTGT+GGG | 0.475474 | 2_2:+40845594 | Msa0251320:three_prime_UTR |
| TTAAGATTGAAAAGAAGAAT+GGG | 0.475660 | 2_2:+40845106 | Msa0251320:CDS |
| CTCGGCTCCCAATCTTCTGC+TGG | 0.480696 | 2_2:+40845209 | Msa0251320:CDS |
| TTCCACTGCAGTGTACTCAT+AGG | 0.484256 | 2_2:+40845748 | Msa0251320:three_prime_UTR |
| GGTCGGTGTCATTTCTTATG+TGG | 0.488948 | 2_2:+40845906 | Msa0251320:three_prime_UTR |
| AACAACGGTGATGTTTCGCT+TGG | 0.489110 | 2_2:-40845085 | None:intergenic |
| GTTCGAATGGGTCAATTCCT+TGG | 0.489817 | 2_2:+40840837 | Msa0251320:five_prime_UTR |
| ACAACGGTGATGTTTCGCTT+GGG | 0.491642 | 2_2:-40845084 | None:intergenic |
| GTCAAAATCTGCTCACACTA+AGG | 0.493665 | 2_2:+40841826 | Msa0251320:five_prime_UTR |
| TGCTGTCCAGTTTAGAGAGA+AGG | 0.493727 | 2_2:-40840013 | None:intergenic |
| TTCTTTCATATGCTTAAGTG+TGG | 0.501370 | 2_2:+40846064 | Msa0251320:three_prime_UTR |
| CCAGTCGTATTACTACTTGT+CGG | 0.504219 | 2_2:-40845270 | None:intergenic |
| CCCTGCACAAATATGGCCGT+TGG | 0.509569 | 2_2:+40840811 | Msa0251320:five_prime_UTR |
| CGCTGACAGAAGCCATGTCA+AGG | 0.513310 | 2_2:-40845509 | None:intergenic |
| AAATTTACTTTCGGCATGGT+TGG | 0.514511 | 2_2:+40845130 | Msa0251320:CDS |
| CCTGCACAAATATGGCCGTT+GGG | 0.520379 | 2_2:+40840812 | Msa0251320:five_prime_UTR |
| GCACATGGTAATTATATTAG+CGG | 0.520474 | 2_2:-40844425 | None:intergenic |
| TGGCCGTTGGGAAGTTCGAA+TGG | 0.520925 | 2_2:+40840824 | Msa0251320:five_prime_UTR |
| CTGCAAGATCGGAGGTGACT+GGG | 0.527752 | 2_2:+40845629 | Msa0251320:three_prime_UTR |
| AATCCAGAAAATGAGGATCA+AGG | 0.531520 | 2_2:+40841729 | Msa0251320:five_prime_UTR |
| AATCCAGAAAATGAGGATCA+AGG | 0.531520 | 2_2:+40841775 | Msa0251320:five_prime_UTR |
| GGGAAAATTTACTTTCGGCA+TGG | 0.532173 | 2_2:+40845126 | Msa0251320:CDS |
| AATGATGAAGAAAAGGCAAT+CGG | 0.534719 | 2_2:-40840070 | None:intergenic |
| TGTCCAGCAAAGAGCAACCT+TGG | 0.536252 | 2_2:+40845840 | Msa0251320:three_prime_UTR |
| CATGACCTTCGACCAACCTA+AGG | 0.538376 | 2_2:-40845668 | None:intergenic |
| TTAATGAAATCCAGAAAATG+AGG | 0.545222 | 2_2:+40841722 | Msa0251320:five_prime_UTR |
| TTAATGAAATCCAGAAAATG+AGG | 0.545222 | 2_2:+40841768 | Msa0251320:five_prime_UTR |
| GTGTAGTGCTGCACTTTGTA+TGG | 0.547619 | 2_2:+40845885 | Msa0251320:three_prime_UTR |
| AATAAACTATTAACTACCCA+AGG | 0.552091 | 2_2:-40845857 | None:intergenic |
| GCAGCATTACGTAGTCGTCA+AGG | 0.552918 | 2_2:-40845056 | None:intergenic |
| GGCCGTTGGGAAGTTCGAAT+GGG | 0.552953 | 2_2:+40840825 | Msa0251320:five_prime_UTR |
| GTCCAGCAAAGAGCAACCTT+GGG | 0.553772 | 2_2:+40845841 | Msa0251320:three_prime_UTR |
| CATCACGATCAACATATGTC+GGG | 0.557270 | 2_2:-40845308 | None:intergenic |
| ACACAGCTCATGCTGCTGCT+AGG | 0.558875 | 2_2:+40840447 | Msa0251320:five_prime_UTR |
| CCATCACGATCAACATATGT+CGG | 0.559901 | 2_2:-40845309 | None:intergenic |
| CCGACATATGTTGATCGTGA+TGG | 0.559907 | 2_2:+40845309 | Msa0251320:three_prime_UTR |
| AAGAAGTTATTCTGCAAGAT+CGG | 0.560965 | 2_2:+40845618 | Msa0251320:three_prime_UTR |
| TTGACTACGAGGGTTGTGCT+TGG | 0.563475 | 2_2:+40845565 | Msa0251320:three_prime_UTR |
| TCAACATATGTCGGGAAAGT+GGG | 0.570993 | 2_2:-40845300 | None:intergenic |
| ACAAGATTGAGCTAGGGGCA+TGG | 0.572759 | 2_2:+40845172 | Msa0251320:CDS |
| GTCTATTTGAGATATGTTCG+TGG | 0.579856 | 2_2:+40844373 | Msa0251320:five_prime_UTR |
| ACGCTTTGTATGGCGTGTCT+GGG | 0.581074 | 2_2:+40846024 | Msa0251320:three_prime_UTR |
| TTATGTCAGCATCAACTCCC+CGG | 0.582201 | 2_2:-40840577 | None:intergenic |
| AATCAGATGCTGCCTTGACA+TGG | 0.582544 | 2_2:+40845497 | Msa0251320:intron |
| AGTGCTGCACTTTGTATGGT+CGG | 0.585066 | 2_2:+40845889 | Msa0251320:three_prime_UTR |
| CTCCTATGAGTACACTGCAG+TGG | 0.590116 | 2_2:-40845750 | None:intergenic |
| CGTATTACTACTTGTCGGGA+AGG | 0.590989 | 2_2:-40845265 | None:intergenic |
| AGAAACTCTCGTCTCTTAGA+GGG | 0.594164 | 2_2:-40844397 | None:intergenic |
| TAATTTGCTAGGACAAGGCA+AGG | 0.597697 | 2_2:+40844998 | Msa0251320:intron |
| CCGACAAGTAGTAATACGAC+TGG | 0.599514 | 2_2:+40845270 | Msa0251320:three_prime_UTR |
| CTGACTATTGTTGACTACGA+GGG | 0.606573 | 2_2:+40845555 | Msa0251320:three_prime_UTR |
| CAGCATTACGTAGTCGTCAA+GGG | 0.607756 | 2_2:-40845055 | None:intergenic |
| ATGGATAAAACTGACATACT+CGG | 0.613160 | 2_2:+40845191 | Msa0251320:CDS |
| TACTCTTTGGCAAAACACGT+TGG | 0.617335 | 2_2:-40845024 | None:intergenic |
| AAGCCCATTGAGAATGTGCA+TGG | 0.620844 | 2_2:+40845780 | Msa0251320:three_prime_UTR |
| ATGACCTTCGACCAACCTAA+GGG | 0.621651 | 2_2:-40845667 | None:intergenic |
| TTTACCCTTAGGTTGGTCGA+AGG | 0.625353 | 2_2:+40845663 | Msa0251320:three_prime_UTR |
| CCAACGGCCATATTTGTGCA+GGG | 0.625783 | 2_2:-40840811 | None:intergenic |
| GACCCATTCGAACTTCCCAA+CGG | 0.637948 | 2_2:-40840827 | None:intergenic |
| CATCAGAGTCAATTAGCACA+TGG | 0.639173 | 2_2:-40844440 | None:intergenic |
| AAGTTATTCTGCAAGATCGG+AGG | 0.640765 | 2_2:+40845621 | Msa0251320:three_prime_UTR |
| GTGGAAAATGCCTCGTGTGG+AGG | 0.642169 | 2_2:-40845731 | None:intergenic |
| GGATCTTTCAAAACGCCTAG+AGG | 0.655015 | 2_2:+40841796 | Msa0251320:five_prime_UTR |
| AGAGGGAGTTCGAACTACAG+AGG | 0.662927 | 2_2:+40840783 | Msa0251320:five_prime_UTR |
| ACAACACTGTCCTCCACACG+AGG | 0.664724 | 2_2:+40845721 | Msa0251320:three_prime_UTR |
| CGGGAAGGAAATCTAGACAC+AGG | 0.677154 | 2_2:-40845250 | None:intergenic |
| GCAGTGGAAAATGCCTCGTG+TGG | 0.677292 | 2_2:-40845734 | None:intergenic |
| TGAGGTGAAGAATAATAGTG+TGG | 0.688256 | 2_2:+40844351 | Msa0251320:intron |
| CGAGCTGCGATTAAATTCCG+GGG | 0.689842 | 2_2:+40840560 | Msa0251320:five_prime_UTR |
| AGCCCATTGAGAATGTGCAT+GGG | 0.695329 | 2_2:+40845781 | Msa0251320:three_prime_UTR |
| GCTGACTATTGTTGACTACG+AGG | 0.712510 | 2_2:+40845554 | Msa0251320:three_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAATATACATACAAA+AGG | - | chr2_2:40843836-40843855 | None:intergenic | 10.0% |
| !!! | TTTTTATTCAAAATTATGTT+TGG | + | chr2_2:40844097-40844116 | Msa0251320:intron | 10.0% |
| !! | ATTTCAATAAATTAAAACAG+AGG | - | chr2_2:40840346-40840365 | None:intergenic | 15.0% |
| !! | ACTTCAGTTAAATTAAAAAT+AGG | - | chr2_2:40840876-40840895 | None:intergenic | 15.0% |
| !!! | TGAATGCATATAAATTTTAT+AGG | + | chr2_2:40842063-40842082 | Msa0251320:intron | 15.0% |
| !!! | ATTATAGTTTCTCTAATTTT+TGG | - | chr2_2:40842112-40842131 | None:intergenic | 15.0% |
| !!! | TTGAAAATCATATCTTTTTT+TGG | + | chr2_2:40842657-40842676 | Msa0251320:intron | 15.0% |
| !!! | TGAAAATCATATCTTTTTTT+GGG | + | chr2_2:40842658-40842677 | Msa0251320:intron | 15.0% |
| !! | AATTAACAATACTAATTACT+TGG | - | chr2_2:40842824-40842843 | None:intergenic | 15.0% |
| !!! | AAAAGAATCATTATTTTTAG+TGG | - | chr2_2:40843501-40843520 | None:intergenic | 15.0% |
| !! | ATATCATTATCATATTGATA+TGG | - | chr2_2:40843628-40843647 | None:intergenic | 15.0% |
| !!! | AATGTTTTCTTAATTTCTTT+TGG | + | chr2_2:40843663-40843682 | Msa0251320:intron | 15.0% |
| !! | TAATTCTTAAGATTGATATT+TGG | - | chr2_2:40843783-40843802 | None:intergenic | 15.0% |
| !!! | ACTGCATATTTTAATTTTTA+TGG | + | chr2_2:40843989-40844008 | Msa0251320:intron | 15.0% |
| !!! | TTATTTTATGTTGATCATTA+AGG | + | chr2_2:40844063-40844082 | Msa0251320:intron | 15.0% |
| !!! | TTAGATTGTGAATTTTTGTT+GGG | + | chr2_2:40840233-40840252 | Msa0251320:intron | 20.0% |
| !!! | GTTAGGATTTTTATTGATTT+AGG | + | chr2_2:40840277-40840296 | Msa0251320:intron | 20.0% |
| !!! | AATTTGTGTTTGATTTTTGT+AGG | + | chr2_2:40840417-40840436 | Msa0251320:intron | 20.0% |
| !!! | TTTTCGATATTTTGTTACTT+AGG | + | chr2_2:40840698-40840717 | Msa0251320:intron | 20.0% |
| !!! | ATTATGAATTTAAAACCCTA+AGG | + | chr2_2:40840919-40840938 | Msa0251320:intron | 20.0% |
| !!! | TTCAGTGAAAAAACTTTTAA+AGG | - | chr2_2:40841222-40841241 | None:intergenic | 20.0% |
| !! | AGTATCTTTATATGAAACTT+TGG | + | chr2_2:40841257-40841276 | Msa0251320:intron | 20.0% |
| !! | ATTTCAGCAACTTAATTAAA+TGG | + | chr2_2:40841409-40841428 | Msa0251320:intron | 20.0% |
| !! | ATTAAACTATGTTGTATAAC+AGG | + | chr2_2:40841503-40841522 | Msa0251320:intron | 20.0% |
| !!! | ATTTTCTGGATTTCATTAAT+TGG | - | chr2_2:40841721-40841740 | None:intergenic | 20.0% |
| !!! | ATTTTCTGGATTTCATTAAT+TGG | - | chr2_2:40841721-40841740 | None:intergenic | 20.0% |
| !!! | TTGTATTTTTGTGATATAGA+TGG | + | chr2_2:40842359-40842378 | Msa0251320:intron | 20.0% |
| !!! | ATACACAAATTATGAGTTTT+TGG | + | chr2_2:40842393-40842412 | Msa0251320:intron | 20.0% |
| !!! | TACACAAATTATGAGTTTTT+GGG | + | chr2_2:40842394-40842413 | Msa0251320:intron | 20.0% |
| !!! | CTTTGATTTTTAAATTTCAG+AGG | + | chr2_2:40842611-40842630 | Msa0251320:intron | 20.0% |
| !!! | CTGATTTCAGAATTAATTTT+TGG | + | chr2_2:40842789-40842808 | Msa0251320:intron | 20.0% |
| !! | ATCAAATTCAAAGAAAGTTA+AGG | - | chr2_2:40843198-40843217 | None:intergenic | 20.0% |
| !! | GTTATAATAGTATTACATTG+CGG | + | chr2_2:40843378-40843397 | Msa0251320:intron | 20.0% |
| !!! | CTAATTTTTATTCCCAATTA+TGG | - | chr2_2:40843527-40843546 | None:intergenic | 20.0% |
| !! | TCATATTGATATGGAATAAA+GGG | - | chr2_2:40843619-40843638 | None:intergenic | 20.0% |
| !! | ATCATATTGATATGGAATAA+AGG | - | chr2_2:40843620-40843639 | None:intergenic | 20.0% |
| !! | TATACTGTATGTTATGAAAT+TGG | + | chr2_2:40843705-40843724 | Msa0251320:intron | 20.0% |
| !!! | TTTTTCCTTTCTTTTTTATC+TGG | + | chr2_2:40843852-40843871 | Msa0251320:intron | 20.0% |
| !!! | GCATATTTTAATTTTTATGG+TGG | + | chr2_2:40843992-40844011 | Msa0251320:intron | 20.0% |
| !!! | TTTAGAGTTATTTGTTTTAG+AGG | + | chr2_2:40844277-40844296 | Msa0251320:intron | 20.0% |
| !! | AAAAGCTAAAGTAATAAGAA+TGG | - | chr2_2:40844505-40844524 | None:intergenic | 20.0% |
| !! | TCCATAATATGAATAGATAT+TGG | + | chr2_2:40844565-40844584 | Msa0251320:intron | 20.0% |
| !! | ACCAATATCTATTCATATTA+TGG | - | chr2_2:40844569-40844588 | None:intergenic | 20.0% |
| !! | AAAGCTATGAAACTATTATA+AGG | - | chr2_2:40844863-40844882 | None:intergenic | 20.0% |
| !! | TTAAGATTGAAAAGAAGAAT+GGG | + | chr2_2:40845106-40845125 | Msa0251320:CDS | 20.0% |
| !!! | TTGTTGTTCTATCATTTTTG+TGG | - | chr2_2:40840050-40840069 | None:intergenic | 25.0% |
| ! | TATCAAGATGAAATGCAAAT+CGG | - | chr2_2:40840212-40840231 | None:intergenic | 25.0% |
| !! | CTTAGATTGTGAATTTTTGT+TGG | + | chr2_2:40840232-40840251 | Msa0251320:intron | 25.0% |
| ! | CAATAAATTAAAACAGAGGA+AGG | - | chr2_2:40840342-40840361 | None:intergenic | 25.0% |
| !! | TTATGATGATGATCTTAAAC+AGG | + | chr2_2:40840616-40840635 | Msa0251320:five_prime_UTR | 25.0% |
| !! | TGTTATGAGAAACATGTTTT+AGG | + | chr2_2:40841004-40841023 | Msa0251320:intron | 25.0% |
| !! | GTTATGAGAAACATGTTTTA+GGG | + | chr2_2:40841005-40841024 | Msa0251320:intron | 25.0% |
| !!! | TTATGAGAAACATGTTTTAG+GGG | + | chr2_2:40841006-40841025 | Msa0251320:intron | 25.0% |
| !!! | GTTTCTAGAATTAATGTTGT+TGG | + | chr2_2:40841037-40841056 | Msa0251320:intron | 25.0% |
| ! | TGTATATTTATGATCCTGTT+TGG | + | chr2_2:40841113-40841132 | Msa0251320:intron | 25.0% |
| ! | ATATATTCAAATCACCAAAC+AGG | - | chr2_2:40841130-40841149 | None:intergenic | 25.0% |
| ! | ACTAAAAAGTGAGAAAAGTA+TGG | - | chr2_2:40841351-40841370 | None:intergenic | 25.0% |
| !!! | ACTAATAGACATTGACTTAA+TGG | - | chr2_2:40841541-40841560 | None:intergenic | 25.0% |
| ! | TTAATGAAATCCAGAAAATG+AGG | + | chr2_2:40841722-40841741 | Msa0251320:five_prime_UTR | 25.0% |
| ! | TTAATGAAATCCAGAAAATG+AGG | + | chr2_2:40841722-40841741 | Msa0251320:five_prime_UTR | 25.0% |
| ! | TATAACAACATGCCAAATAT+GGG | + | chr2_2:40841989-40842008 | Msa0251320:intron | 25.0% |
| ! | TATGCTGCTAAAATCTAAAA+TGG | - | chr2_2:40842015-40842034 | None:intergenic | 25.0% |
| !!! | TTTCTCTAATTTTTGGAACA+GGG | - | chr2_2:40842105-40842124 | None:intergenic | 25.0% |
| ! | TGCAAAAACAAAAACAAAGT+CGG | - | chr2_2:40842171-40842190 | None:intergenic | 25.0% |
| !!! | TTTGTTTTTGTTTTTGCAAG+AGG | + | chr2_2:40842173-40842192 | Msa0251320:intron | 25.0% |
| !!! | TTGTTTTTGTTTTTGCAAGA+GGG | + | chr2_2:40842174-40842193 | Msa0251320:intron | 25.0% |
| !! | AACTCATAATTTGTGTATCA+AGG | - | chr2_2:40842391-40842410 | None:intergenic | 25.0% |
| !! | AAAGTGCTAATTTCCATATT+AGG | + | chr2_2:40842583-40842602 | Msa0251320:intron | 25.0% |
| ! | ACTACAGAAATTACTTATGA+TGG | - | chr2_2:40843095-40843114 | None:intergenic | 25.0% |
| ! | AATTGCTTTCATGCTATATT+CGG | + | chr2_2:40843117-40843136 | Msa0251320:intron | 25.0% |
| !! | TTCTCTAAAAACAATAGTTG+AGG | - | chr2_2:40843476-40843495 | None:intergenic | 25.0% |
| ! | AATTCTATAATTCAGCTCAA+GGG | - | chr2_2:40843736-40843755 | None:intergenic | 25.0% |
| ! | TATTTGAGTGTATGTTTCAA+AGG | + | chr2_2:40844239-40844258 | Msa0251320:intron | 25.0% |
| !!! | ATTACTTTAGCTTTTTGTTC+TGG | + | chr2_2:40844510-40844529 | Msa0251320:intron | 25.0% |
| !!! | CTGGAATTTTAAGACATATA+TGG | + | chr2_2:40844618-40844637 | Msa0251320:exon | 25.0% |
| ! | ATGTTAGATAAAAAGGATTG+AGG | - | chr2_2:40844692-40844711 | None:intergenic | 25.0% |
| !! | AATCCTTTTTATCTAACATC+AGG | + | chr2_2:40844693-40844712 | Msa0251320:intron | 25.0% |
| ! | AAACCTGATGTTAGATAAAA+AGG | - | chr2_2:40844699-40844718 | None:intergenic | 25.0% |
| !!! | TATACTTTTTAGTATGCTCT+AGG | + | chr2_2:40844753-40844772 | Msa0251320:intron | 25.0% |
| !!! | ATACTTTTTAGTATGCTCTA+GGG | + | chr2_2:40844754-40844773 | Msa0251320:intron | 25.0% |
| !! | TTTTGATAAATCTAAACCGA+TGG | - | chr2_2:40844835-40844854 | None:intergenic | 25.0% |
| ! | GGTTTAGATTTATCAAAAGT+TGG | + | chr2_2:40844837-40844856 | Msa0251320:intron | 25.0% |
| ! | TTAGCAGTGAAAATATAGTT+TGG | - | chr2_2:40844953-40844972 | None:intergenic | 25.0% |
| !!! | ACATTATTTGCTAATTTGCT+AGG | + | chr2_2:40844987-40845006 | Msa0251320:intron | 25.0% |
| !! | CTTCTTTTCAATCTTAACAA+CGG | - | chr2_2:40845103-40845122 | None:intergenic | 25.0% |
| ! | GTTAAGATTGAAAAGAAGAA+TGG | + | chr2_2:40845105-40845124 | Msa0251320:CDS | 25.0% |
| ! | AGAATGGGAAAATTTACTTT+CGG | + | chr2_2:40845121-40845140 | Msa0251320:CDS | 25.0% |
| !! | AATTTTTACAAGATTGAGCT+AGG | + | chr2_2:40845165-40845184 | Msa0251320:CDS | 25.0% |
| !! | ATTTTTACAAGATTGAGCTA+GGG | + | chr2_2:40845166-40845185 | Msa0251320:CDS | 25.0% |
| ! | AATAAACTATTAACTACCCA+AGG | - | chr2_2:40845860-40845879 | None:intergenic | 25.0% |
| AATGATGAAGAAAAGGCAAT+CGG | - | chr2_2:40840073-40840092 | None:intergenic | 30.0% | |
| TACCTTGAATGATGAAGAAA+AGG | - | chr2_2:40840080-40840099 | None:intergenic | 30.0% | |
| ATCTGATATCATGCATGTTT+AGG | + | chr2_2:40840122-40840141 | Msa0251320:intron | 30.0% | |
| ! | TCTTTTCATCAATCTTCATG+AGG | + | chr2_2:40840152-40840171 | Msa0251320:intron | 30.0% |
| ATCAAGATGAAATGCAAATC+GGG | - | chr2_2:40840211-40840230 | None:intergenic | 30.0% | |
| ! | TTGTGAATTTTTGTTGGGTT+TGG | + | chr2_2:40840238-40840257 | Msa0251320:intron | 30.0% |
| !! | TTGTGTTTGATTTTTGTAGG+TGG | + | chr2_2:40840420-40840439 | Msa0251320:intron | 30.0% |
| TTGATGAATGTGAAACTAGA+TGG | + | chr2_2:40840660-40840679 | Msa0251320:intron | 30.0% | |
| ! | AAAGCAATGTTTTCTCAAGA+GGG | + | chr2_2:40840766-40840785 | Msa0251320:five_prime_UTR | 30.0% |
| !! | GAAAACTGATTCACTTTTGT+TGG | - | chr2_2:40840948-40840967 | None:intergenic | 30.0% |
| ! | TTAATTCTCGACACACTTTT+AGG | + | chr2_2:40840971-40840990 | Msa0251320:intron | 30.0% |
| TTGTTTGTGTGATTTCTGTT+TGG | + | chr2_2:40841077-40841096 | Msa0251320:intron | 30.0% | |
| !!! | CACTTTTTAGTTGATTGTGA+TGG | + | chr2_2:40841360-40841379 | Msa0251320:intron | 30.0% |
| TGACTTAATGGCATTTATCT+CGG | - | chr2_2:40841529-40841548 | None:intergenic | 30.0% | |
| CTATAACAACATGCCAAATA+TGG | + | chr2_2:40841988-40842007 | Msa0251320:intron | 30.0% | |
| ! | AATCTAAAATGGCCCATATT+TGG | - | chr2_2:40842004-40842023 | None:intergenic | 30.0% |
| !!! | TTCTCTAATTTTTGGAACAG+GGG | - | chr2_2:40842104-40842123 | None:intergenic | 30.0% |
| !!! | GTTTCTCTAATTTTTGGAAC+AGG | - | chr2_2:40842106-40842125 | None:intergenic | 30.0% |
| !! | GATGAATTGATGGATTGATT+TGG | + | chr2_2:40842201-40842220 | Msa0251320:intron | 30.0% |
| ! | TCCTTTTCTGATAAAGAAAC+TGG | + | chr2_2:40842252-40842271 | Msa0251320:intron | 30.0% |
| ! | CCTTTTCTGATAAAGAAACT+GGG | + | chr2_2:40842253-40842272 | Msa0251320:intron | 30.0% |
| ! | CTGGGTTGAATATAGAAAAT+TGG | + | chr2_2:40842271-40842290 | Msa0251320:intron | 30.0% |
| !! | ACAAATTATGAGTTTTTGGG+TGG | + | chr2_2:40842397-40842416 | Msa0251320:intron | 30.0% |
| ACAGCTTTACAATGAAAGTT+TGG | + | chr2_2:40842518-40842537 | Msa0251320:intron | 30.0% | |
| ! | TATATTTCTTTTGCAAGCTG+AGG | + | chr2_2:40842555-40842574 | Msa0251320:intron | 30.0% |
| AATCAAAGTGAGACCTAATA+TGG | - | chr2_2:40842599-40842618 | None:intergenic | 30.0% | |
| ! | ACTCATTCAGTTTTTCTTGA+AGG | - | chr2_2:40842885-40842904 | None:intergenic | 30.0% |
| ! | GTTTTTATGCGTGACTAAAA+TGG | - | chr2_2:40843028-40843047 | None:intergenic | 30.0% |
| !! | TGGAGTTTTATATTTCCAAC+TGG | - | chr2_2:40843075-40843094 | None:intergenic | 30.0% |
| ATCAGGATTATGATGTTAAC+TGG | + | chr2_2:40843152-40843171 | Msa0251320:intron | 30.0% | |
| TAACCTTCTGACATTTATGT+TGG | - | chr2_2:40843293-40843312 | None:intergenic | 30.0% | |
| ! | CACTGTAACTTTTTGCATAT+AGG | - | chr2_2:40843409-40843428 | None:intergenic | 30.0% |
| ! | TGATTCTTTTGAGCCATAAT+TGG | + | chr2_2:40843511-40843530 | Msa0251320:intron | 30.0% |
| ! | GATTCTTTTGAGCCATAATT+GGG | + | chr2_2:40843512-40843531 | Msa0251320:intron | 30.0% |
| GGGATTTCTATTACTCTAAA+TGG | - | chr2_2:40843599-40843618 | None:intergenic | 30.0% | |
| GAATTCTATAATTCAGCTCA+AGG | - | chr2_2:40843737-40843756 | None:intergenic | 30.0% | |
| AAATTAATACTTGCAGAGGA+AGG | - | chr2_2:40843811-40843830 | None:intergenic | 30.0% | |
| GGTTAAATTAATACTTGCAG+AGG | - | chr2_2:40843815-40843834 | None:intergenic | 30.0% | |
| GCATTCAATACAGAAAAATG+AGG | - | chr2_2:40843878-40843897 | None:intergenic | 30.0% | |
| ! | GATCAAAGTTTTCCTCATTA+TGG | + | chr2_2:40844020-40844039 | Msa0251320:intron | 30.0% |
| ATTGAGACAATTGAGTGAAA+GGG | - | chr2_2:40844187-40844206 | None:intergenic | 30.0% | |
| AATTGAGACAATTGAGTGAA+AGG | - | chr2_2:40844188-40844207 | None:intergenic | 30.0% | |
| ACAATTGAGACAATCACATA+TGG | - | chr2_2:40844219-40844238 | None:intergenic | 30.0% | |
| GCACATGGTAATTATATTAG+CGG | - | chr2_2:40844428-40844447 | None:intergenic | 30.0% | |
| GATAAATTGGATTACTACCT+TGG | - | chr2_2:40844903-40844922 | None:intergenic | 30.0% | |
| ATGAGCAATGAGTGATAAAT+TGG | - | chr2_2:40844916-40844935 | None:intergenic | 30.0% | |
| ! | TTTTTACAAGATTGAGCTAG+GGG | + | chr2_2:40845167-40845186 | Msa0251320:CDS | 30.0% |
| ATGGATAAAACTGACATACT+CGG | + | chr2_2:40845191-40845210 | Msa0251320:CDS | 30.0% | |
| ! | GCAAAAAAAGTACACCAAAT+TGG | - | chr2_2:40845340-40845359 | None:intergenic | 30.0% |
| CAAAAATCCTGAAACGATAT+CGG | - | chr2_2:40845388-40845407 | None:intergenic | 30.0% | |
| AAGAAGTTATTCTGCAAGAT+CGG | + | chr2_2:40845618-40845637 | Msa0251320:three_prime_UTR | 30.0% | |
| ACATGATTGCAAAAACAGAA+AGG | - | chr2_2:40845933-40845952 | None:intergenic | 30.0% | |
| !!! | TCTGTTTTTGCAATCATGTA+TGG | + | chr2_2:40845934-40845953 | Msa0251320:three_prime_UTR | 30.0% |
| ACACATAGTAGCAAAGAAAA+TGG | - | chr2_2:40845986-40846005 | None:intergenic | 30.0% | |
| TTCTTTCATATGCTTAAGTG+TGG | + | chr2_2:40846064-40846083 | Msa0251320:three_prime_UTR | 30.0% | |
| ! | TGCCTTTTCTTCATCATTCA+AGG | + | chr2_2:40840075-40840094 | Msa0251320:five_prime_UTR | 35.0% |
| TCAAGATGAAATGCAAATCG+GGG | - | chr2_2:40840210-40840229 | None:intergenic | 35.0% | |
| ! | TGAATTTTTGTTGGGTTTGG+TGG | + | chr2_2:40840241-40840260 | Msa0251320:intron | 35.0% |
| !! | GTGGATTTTGGAAGAAAGTT+AGG | + | chr2_2:40840260-40840279 | Msa0251320:intron | 35.0% |
| GATTTAGGTGAAAGAATCTG+TGG | + | chr2_2:40840292-40840311 | Msa0251320:intron | 35.0% | |
| ATTTGCTTTCATGTTGTGCA+AGG | + | chr2_2:40840364-40840383 | Msa0251320:intron | 35.0% | |
| ! | TTCATGTTGTGCAAGGTTTT+TGG | + | chr2_2:40840371-40840390 | Msa0251320:intron | 35.0% |
| ! | CAAAGCAATGTTTTCTCAAG+AGG | + | chr2_2:40840765-40840784 | Msa0251320:five_prime_UTR | 35.0% |
| !!! | TAGGTTCTCACTTTTTACCA+AGG | - | chr2_2:40840857-40840876 | None:intergenic | 35.0% |
| !! | AACTGATTCACTTTTGTTGG+AGG | - | chr2_2:40840945-40840964 | None:intergenic | 35.0% |
| ACTTGTTCAACTCAAGGAAA+AGG | - | chr2_2:40841156-40841175 | None:intergenic | 35.0% | |
| ! | TACATGGATGTGTGTTTTGT+TGG | + | chr2_2:40841175-40841194 | Msa0251320:intron | 35.0% |
| !! | GTGTTTTGTTGGTCTATGTT+TGG | + | chr2_2:40841186-40841205 | Msa0251320:intron | 35.0% |
| AAGTATGGTGCTCATCATTA+AGG | - | chr2_2:40841336-40841355 | None:intergenic | 35.0% | |
| AATCCAGAAAATGAGGATCA+AGG | + | chr2_2:40841729-40841748 | Msa0251320:five_prime_UTR | 35.0% | |
| AATCCAGAAAATGAGGATCA+AGG | + | chr2_2:40841729-40841748 | Msa0251320:five_prime_UTR | 35.0% | |
| CCCAGTTTCTTTATCAGAAA+AGG | - | chr2_2:40842256-40842275 | None:intergenic | 35.0% | |
| !!! | TGGTCACTTTTCTCATTTGA+TGG | + | chr2_2:40842291-40842310 | Msa0251320:intron | 35.0% |
| !!! | TATGAGTTTTTGGGTGGAAA+AGG | + | chr2_2:40842403-40842422 | Msa0251320:intron | 35.0% |
| GCTTTACAATGAAAGTTTGG+TGG | + | chr2_2:40842521-40842540 | Msa0251320:intron | 35.0% | |
| TATGCTAAGATTCGTTTCTG+TGG | + | chr2_2:40842845-40842864 | Msa0251320:intron | 35.0% | |
| AAGATTCGTTTCTGTGGATT+TGG | + | chr2_2:40842851-40842870 | Msa0251320:intron | 35.0% | |
| GTACCAACATAAATGTCAGA+AGG | + | chr2_2:40843287-40843306 | Msa0251320:intron | 35.0% | |
| TGAGGCCAGATAAAAAAGAA+AGG | - | chr2_2:40843860-40843879 | None:intergenic | 35.0% | |
| TTAACTCAGCTTCCATAATG+AGG | - | chr2_2:40844035-40844054 | None:intergenic | 35.0% | |
| TGAGGTGAAGAATAATAGTG+TGG | + | chr2_2:40844351-40844370 | Msa0251320:intron | 35.0% | |
| ! | GTCTATTTGAGATATGTTCG+TGG | + | chr2_2:40844373-40844392 | Msa0251320:five_prime_UTR | 35.0% |
| !!! | ACTTTAGCTTTTTGTTCTGG+TGG | + | chr2_2:40844513-40844532 | Msa0251320:intron | 35.0% |
| !! | TGACATTGCTTTTGTTGGAA+AGG | + | chr2_2:40844591-40844610 | Msa0251320:five_prime_UTR | 35.0% |
| ! | CATAGCTTTACTTTGTATGC+TGG | + | chr2_2:40844874-40844893 | Msa0251320:intron | 35.0% |
| AAATTTACTTTCGGCATGGT+TGG | + | chr2_2:40845130-40845149 | Msa0251320:CDS | 35.0% | |
| ! | CGATATCGTTTCAGGATTTT+TGG | + | chr2_2:40845386-40845405 | Msa0251320:three_prime_UTR | 35.0% |
| TAGTCAGCTAACACTTTCTT+CGG | - | chr2_2:40845542-40845561 | None:intergenic | 35.0% | |
| ! | TGATTTGCAGTTTGTGATTG+TGG | + | chr2_2:40845593-40845612 | Msa0251320:three_prime_UTR | 35.0% |
| GATTTGCAGTTTGTGATTGT+GGG | + | chr2_2:40845594-40845613 | Msa0251320:three_prime_UTR | 35.0% | |
| !! | CTATCTGTTGATTTACCCTT+AGG | + | chr2_2:40845652-40845671 | Msa0251320:three_prime_UTR | 35.0% |
| TTTAACAGACACGCTTTGTA+TGG | + | chr2_2:40846014-40846033 | Msa0251320:three_prime_UTR | 35.0% | |
| !! | GGTTGTTTTCTAATTGTGTG+TGG | + | chr2_2:40846085-40846104 | Msa0251320:three_prime_UTR | 35.0% |
| CAAGATGAAATGCAAATCGG+GGG | - | chr2_2:40840209-40840228 | None:intergenic | 40.0% | |
| !!! | TTGTTGGGTTTGGTGGATTT+TGG | + | chr2_2:40840248-40840267 | Msa0251320:intron | 40.0% |
| TTTAATCGCAGCTCGATCAT+AGG | - | chr2_2:40840555-40840574 | None:intergenic | 40.0% | |
| ATCGAGCTGCGATTAAATTC+CGG | + | chr2_2:40840558-40840577 | Msa0251320:five_prime_UTR | 40.0% | |
| GGCGAAGAATTTATCGAAAG+AGG | + | chr2_2:40840719-40840738 | Msa0251320:intron | 40.0% | |
| CCATGTACTTGTTCAACTCA+AGG | - | chr2_2:40841162-40841181 | None:intergenic | 40.0% | |
| !! | CCTTGAGTTGAACAAGTACA+TGG | + | chr2_2:40841159-40841178 | Msa0251320:intron | 40.0% |
| CAGCAATGTTCAAGCTCAAT+GGG | - | chr2_2:40841295-40841314 | None:intergenic | 40.0% | |
| TCAGCAATGTTCAAGCTCAA+TGG | - | chr2_2:40841296-40841315 | None:intergenic | 40.0% | |
| !! | TATTAGTCTTCCACCTGCTT+TGG | + | chr2_2:40841554-40841573 | Msa0251320:intron | 40.0% |
| AGTCAAAAAACCAAAGCAGG+TGG | - | chr2_2:40841567-40841586 | None:intergenic | 40.0% | |
| CTCAGTCAAAAAACCAAAGC+AGG | - | chr2_2:40841570-40841589 | None:intergenic | 40.0% | |
| ! | GATCCTTGATCCTCATTTTC+TGG | - | chr2_2:40841735-40841754 | None:intergenic | 40.0% |
| ! | GATCCTTGATCCTCATTTTC+TGG | - | chr2_2:40841735-40841754 | None:intergenic | 40.0% |
| !! | ATTTTGACATGCACTCCTCT+AGG | - | chr2_2:40841814-40841833 | None:intergenic | 40.0% |
| GTCAAAATCTGCTCACACTA+AGG | + | chr2_2:40841826-40841845 | Msa0251320:five_prime_UTR | 40.0% | |
| TTCACATGAGAAGCTTGTAG+TGG | - | chr2_2:40842047-40842066 | None:intergenic | 40.0% | |
| AGAGGGACTTGATGAATTGA+TGG | + | chr2_2:40842191-40842210 | Msa0251320:intron | 40.0% | |
| ! | TTGATGGATCGAAATGCTTC+AGG | + | chr2_2:40842307-40842326 | Msa0251320:intron | 40.0% |
| TCGAAATGCTTCAGGATTGA+TGG | + | chr2_2:40842315-40842334 | Msa0251320:intron | 40.0% | |
| !! | TGCTTCAGGATTGATGGTTT+TGG | + | chr2_2:40842321-40842340 | Msa0251320:intron | 40.0% |
| GCGTGACTAAAATGGATAGA+CGG | - | chr2_2:40843020-40843039 | None:intergenic | 40.0% | |
| !!! | CTTTGTTTTCTCAGTCCAGT+TGG | + | chr2_2:40843057-40843076 | Msa0251320:intron | 40.0% |
| TTCGGAGAGACTTAGATATC+AGG | + | chr2_2:40843135-40843154 | Msa0251320:intron | 40.0% | |
| !! | TTTCTTTTGGTTGTCATGCG+TGG | + | chr2_2:40843676-40843695 | Msa0251320:intron | 40.0% |
| TAATACTTGCAGAGGAAGGA+AGG | - | chr2_2:40843807-40843826 | None:intergenic | 40.0% | |
| !! | GCTTCTTATTGCTGTTTCTG+AGG | + | chr2_2:40844333-40844352 | Msa0251320:intron | 40.0% |
| AGAAACTCTCGTCTCTTAGA+GGG | - | chr2_2:40844400-40844419 | None:intergenic | 40.0% | |
| CATCAGAGTCAATTAGCACA+TGG | - | chr2_2:40844443-40844462 | None:intergenic | 40.0% | |
| !! | GGTGATGACATTGCTTTTGT+TGG | + | chr2_2:40844586-40844605 | Msa0251320:five_prime_UTR | 40.0% |
| ! | CTTTTGTTGGAAAGGACATC+TGG | + | chr2_2:40844599-40844618 | Msa0251320:five_prime_UTR | 40.0% |
| TAGTTTCATCGCCTGTGTAT+AGG | + | chr2_2:40844790-40844809 | Msa0251320:intron | 40.0% | |
| ! | CAAAGTGCTTACCTATACAC+AGG | - | chr2_2:40844804-40844823 | None:intergenic | 40.0% |
| GCACTTTGTATAGACACCAT+CGG | + | chr2_2:40844816-40844835 | Msa0251320:intron | 40.0% | |
| ACTTTGTATGCTGGATACCA+AGG | + | chr2_2:40844883-40844902 | Msa0251320:intron | 40.0% | |
| TACTCTTTGGCAAAACACGT+TGG | - | chr2_2:40845027-40845046 | None:intergenic | 40.0% | |
| ! | ACGTGTTTTGCCAAAGAGTA+TGG | + | chr2_2:40845027-40845046 | Msa0251320:CDS | 40.0% |
| !! | TTTTGCCAAAGAGTATGGTG+TGG | + | chr2_2:40845032-40845051 | Msa0251320:CDS | 40.0% |
| GGGAAAATTTACTTTCGGCA+TGG | + | chr2_2:40845126-40845145 | Msa0251320:CDS | 40.0% | |
| ATAGACACCAGCAGAAGATT+GGG | - | chr2_2:40845219-40845238 | None:intergenic | 40.0% | |
| TATAGACACCAGCAGAAGAT+TGG | - | chr2_2:40845220-40845239 | None:intergenic | 40.0% | |
| TGCTGGTGTCTATAAAAAGC+AGG | + | chr2_2:40845226-40845245 | Msa0251320:CDS | 40.0% | |
| CAGTCGTATTACTACTTGTC+GGG | - | chr2_2:40845272-40845291 | None:intergenic | 40.0% | |
| CCAGTCGTATTACTACTTGT+CGG | - | chr2_2:40845273-40845292 | None:intergenic | 40.0% | |
| TCAACATATGTCGGGAAAGT+GGG | - | chr2_2:40845303-40845322 | None:intergenic | 40.0% | |
| ATCAACATATGTCGGGAAAG+TGG | - | chr2_2:40845304-40845323 | None:intergenic | 40.0% | |
| CATCACGATCAACATATGTC+GGG | - | chr2_2:40845311-40845330 | None:intergenic | 40.0% | |
| CCATCACGATCAACATATGT+CGG | - | chr2_2:40845312-40845331 | None:intergenic | 40.0% | |
| TCGTGATGGTCAAACCAATT+TGG | + | chr2_2:40845323-40845342 | Msa0251320:three_prime_UTR | 40.0% | |
| ACCAAATCCGATATCGTTTC+AGG | + | chr2_2:40845378-40845397 | Msa0251320:three_prime_UTR | 40.0% | |
| TCCTGAAACGATATCGGATT+TGG | - | chr2_2:40845382-40845401 | None:intergenic | 40.0% | |
| ! | CTGACTATTGTTGACTACGA+GGG | + | chr2_2:40845555-40845574 | Msa0251320:three_prime_UTR | 40.0% |
| AAGTTATTCTGCAAGATCGG+AGG | + | chr2_2:40845621-40845640 | Msa0251320:three_prime_UTR | 40.0% | |
| !! | CTGTTGATTTACCCTTAGGT+TGG | + | chr2_2:40845656-40845675 | Msa0251320:three_prime_UTR | 40.0% |
| !! | TATCAAGTTTGCTGCTCATC+AGG | + | chr2_2:40845692-40845711 | Msa0251320:three_prime_UTR | 40.0% |
| TTCCCATGCACATTCTCAAT+GGG | - | chr2_2:40845786-40845805 | None:intergenic | 40.0% | |
| ATTCCCATGCACATTCTCAA+TGG | - | chr2_2:40845787-40845806 | None:intergenic | 40.0% | |
| TGCTGTCCAGTTTAGAGAGA+AGG | - | chr2_2:40840016-40840035 | None:intergenic | 45.0% | |
| TCGAGCTGCGATTAAATTCC+GGG | + | chr2_2:40840559-40840578 | Msa0251320:five_prime_UTR | 45.0% | |
| TTATGTCAGCATCAACTCCC+CGG | - | chr2_2:40840580-40840599 | None:intergenic | 45.0% | |
| GTTCGAATGGGTCAATTCCT+TGG | + | chr2_2:40840837-40840856 | Msa0251320:five_prime_UTR | 45.0% | |
| ! | CACTTTTGTTGGAGGCCTTA+GGG | - | chr2_2:40840937-40840956 | None:intergenic | 45.0% |
| !! | TCACTTTTGTTGGAGGCCTT+AGG | - | chr2_2:40840938-40840957 | None:intergenic | 45.0% |
| GGATCTTTCAAAACGCCTAG+AGG | + | chr2_2:40841796-40841815 | Msa0251320:five_prime_UTR | 45.0% | |
| TGAGTGAAAGGGTCACTTGT+TGG | - | chr2_2:40844176-40844195 | None:intergenic | 45.0% | |
| GAGAAACTCTCGTCTCTTAG+AGG | - | chr2_2:40844401-40844420 | None:intergenic | 45.0% | |
| !!! | GCTGCTGCTTTTTCACTAGA+AGG | + | chr2_2:40844462-40844481 | Msa0251320:five_prime_UTR | 45.0% |
| CAGCATTACGTAGTCGTCAA+GGG | - | chr2_2:40845058-40845077 | None:intergenic | 45.0% | |
| ACAACGGTGATGTTTCGCTT+GGG | - | chr2_2:40845087-40845106 | None:intergenic | 45.0% | |
| AACAACGGTGATGTTTCGCT+TGG | - | chr2_2:40845088-40845107 | None:intergenic | 45.0% | |
| CGTATTACTACTTGTCGGGA+AGG | - | chr2_2:40845268-40845287 | None:intergenic | 45.0% | |
| CCGACAAGTAGTAATACGAC+TGG | + | chr2_2:40845270-40845289 | Msa0251320:three_prime_UTR | 45.0% | |
| CCGACATATGTTGATCGTGA+TGG | + | chr2_2:40845309-40845328 | Msa0251320:three_prime_UTR | 45.0% | |
| !!! | GTTTCAGGATTTTTGGTGCG+TGG | + | chr2_2:40845393-40845412 | Msa0251320:intron | 45.0% |
| AATCAGATGCTGCCTTGACA+TGG | + | chr2_2:40845497-40845516 | Msa0251320:intron | 45.0% | |
| ! | GCTGACTATTGTTGACTACG+AGG | + | chr2_2:40845554-40845573 | Msa0251320:three_prime_UTR | 45.0% |
| !! | TTTACCCTTAGGTTGGTCGA+AGG | + | chr2_2:40845663-40845682 | Msa0251320:three_prime_UTR | 45.0% |
| ATGACCTTCGACCAACCTAA+GGG | - | chr2_2:40845670-40845689 | None:intergenic | 45.0% | |
| TTCCACTGCAGTGTACTCAT+AGG | + | chr2_2:40845748-40845767 | Msa0251320:three_prime_UTR | 45.0% | |
| AAGCCCATTGAGAATGTGCA+TGG | + | chr2_2:40845780-40845799 | Msa0251320:three_prime_UTR | 45.0% | |
| AGCCCATTGAGAATGTGCAT+GGG | + | chr2_2:40845781-40845800 | Msa0251320:three_prime_UTR | 45.0% | |
| GTGTAGTGCTGCACTTTGTA+TGG | + | chr2_2:40845885-40845904 | Msa0251320:three_prime_UTR | 45.0% | |
| AGTGCTGCACTTTGTATGGT+CGG | + | chr2_2:40845889-40845908 | Msa0251320:three_prime_UTR | 45.0% | |
| !! | GGTCGGTGTCATTTCTTATG+TGG | + | chr2_2:40845906-40845925 | Msa0251320:three_prime_UTR | 45.0% |
| CGAGCTGCGATTAAATTCCG+GGG | + | chr2_2:40840560-40840579 | Msa0251320:five_prime_UTR | 50.0% | |
| AGAGGGAGTTCGAACTACAG+AGG | + | chr2_2:40840783-40840802 | Msa0251320:five_prime_UTR | 50.0% | |
| GGAGTGACCCTGCACAAATA+TGG | + | chr2_2:40840804-40840823 | Msa0251320:five_prime_UTR | 50.0% | |
| CCAACGGCCATATTTGTGCA+GGG | - | chr2_2:40840814-40840833 | None:intergenic | 50.0% | |
| CCTGCACAAATATGGCCGTT+GGG | + | chr2_2:40840812-40840831 | Msa0251320:five_prime_UTR | 50.0% | |
| GACCCATTCGAACTTCCCAA+CGG | - | chr2_2:40840830-40840849 | None:intergenic | 50.0% | |
| AAGGGCCACACCATACTCTT+TGG | - | chr2_2:40845040-40845059 | None:intergenic | 50.0% | |
| GCAGCATTACGTAGTCGTCA+AGG | - | chr2_2:40845059-40845078 | None:intergenic | 50.0% | |
| ! | TACTTTCGGCATGGTTGGTC+TGG | + | chr2_2:40845135-40845154 | Msa0251320:CDS | 50.0% |
| !! | ACTTTCGGCATGGTTGGTCT+GGG | + | chr2_2:40845136-40845155 | Msa0251320:CDS | 50.0% |
| ACAAGATTGAGCTAGGGGCA+TGG | + | chr2_2:40845172-40845191 | Msa0251320:CDS | 50.0% | |
| CGGGAAGGAAATCTAGACAC+AGG | - | chr2_2:40845253-40845272 | None:intergenic | 50.0% | |
| TTGACTACGAGGGTTGTGCT+TGG | + | chr2_2:40845565-40845584 | Msa0251320:three_prime_UTR | 50.0% | |
| CATGACCTTCGACCAACCTA+AGG | - | chr2_2:40845671-40845690 | None:intergenic | 50.0% | |
| CTCCTATGAGTACACTGCAG+TGG | - | chr2_2:40845753-40845772 | None:intergenic | 50.0% | |
| TGTCCAGCAAAGAGCAACCT+TGG | + | chr2_2:40845840-40845859 | Msa0251320:three_prime_UTR | 50.0% | |
| GTCCAGCAAAGAGCAACCTT+GGG | + | chr2_2:40845841-40845860 | Msa0251320:three_prime_UTR | 50.0% | |
| TACCCAAGGTTGCTCTTTGC+TGG | - | chr2_2:40845846-40845865 | None:intergenic | 50.0% | |
| ACGCTTTGTATGGCGTGTCT+GGG | + | chr2_2:40846024-40846043 | Msa0251320:three_prime_UTR | 50.0% | |
| ACACAGCTCATGCTGCTGCT+AGG | + | chr2_2:40840447-40840466 | Msa0251320:five_prime_UTR | 55.0% | |
| CCCTGCACAAATATGGCCGT+TGG | + | chr2_2:40840811-40840830 | Msa0251320:five_prime_UTR | 55.0% | |
| CCCAACGGCCATATTTGTGC+AGG | - | chr2_2:40840815-40840834 | None:intergenic | 55.0% | |
| TGGCCGTTGGGAAGTTCGAA+TGG | + | chr2_2:40840824-40840843 | Msa0251320:five_prime_UTR | 55.0% | |
| GGCCGTTGGGAAGTTCGAAT+GGG | + | chr2_2:40840825-40840844 | Msa0251320:five_prime_UTR | 55.0% | |
| CGCTGACAGAAGCCATGTCA+AGG | - | chr2_2:40845512-40845531 | None:intergenic | 55.0% | |
| TCTGCAAGATCGGAGGTGAC+TGG | + | chr2_2:40845628-40845647 | Msa0251320:three_prime_UTR | 55.0% | |
| CTGCAAGATCGGAGGTGACT+GGG | + | chr2_2:40845629-40845648 | Msa0251320:three_prime_UTR | 55.0% | |
| ACAACACTGTCCTCCACACG+AGG | + | chr2_2:40845721-40845740 | Msa0251320:three_prime_UTR | 55.0% | |
| GTGGAAAATGCCTCGTGTGG+AGG | - | chr2_2:40845734-40845753 | None:intergenic | 55.0% | |
| GCAGTGGAAAATGCCTCGTG+TGG | - | chr2_2:40845737-40845756 | None:intergenic | 55.0% | |
| CACGCTTTGTATGGCGTGTC+TGG | + | chr2_2:40846023-40846042 | Msa0251320:three_prime_UTR | 55.0% | |
| CTCGGCTCCCAATCTTCTGC+TGG | + | chr2_2:40845209-40845228 | Msa0251320:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_2 | gene | 40840011 | 40846157 | 40840011 | ID=Msa0251320;Name=Msa0251320 |
| chr2_2 | mRNA | 40840011 | 40846157 | 40840011 | ID=Msa0251320-mRNA-1;Parent=Msa0251320;Name=Msa0251320-mRNA-1;_AED=0.03;_eAED=0.03;_QI=690|1|1|1|0.5|0.44|9|802|91 |
| chr2_2 | exon | 40840011 | 40840096 | 40840011 | ID=Msa0251320-mRNA-1:exon:12760;Parent=Msa0251320-mRNA-1 |
| chr2_2 | exon | 40840439 | 40840468 | 40840439 | ID=Msa0251320-mRNA-1:exon:12761;Parent=Msa0251320-mRNA-1 |
| chr2_2 | exon | 40840550 | 40840637 | 40840550 | ID=Msa0251320-mRNA-1:exon:12762;Parent=Msa0251320-mRNA-1 |
| chr2_2 | exon | 40840720 | 40840865 | 40840720 | ID=Msa0251320-mRNA-1:exon:12763;Parent=Msa0251320-mRNA-1 |
| chr2_2 | exon | 40841687 | 40841847 | 40841687 | ID=Msa0251320-mRNA-1:exon:12764;Parent=Msa0251320-mRNA-1 |
| chr2_2 | exon | 40844361 | 40844483 | 40844361 | ID=Msa0251320-mRNA-1:exon:12765;Parent=Msa0251320-mRNA-1 |
| chr2_2 | exon | 40844581 | 40844660 | 40844581 | ID=Msa0251320-mRNA-1:exon:12766;Parent=Msa0251320-mRNA-1 |
| chr2_2 | exon | 40845009 | 40845407 | 40845009 | ID=Msa0251320-mRNA-1:exon:12767;Parent=Msa0251320-mRNA-1 |
| chr2_2 | exon | 40845503 | 40846157 | 40845503 | ID=Msa0251320-mRNA-1:exon:12768;Parent=Msa0251320-mRNA-1 |
| chr2_2 | five_prime_UTR | 40840011 | 40840096 | 40840011 | ID=Msa0251320-mRNA-1:five_prime_utr;Parent=Msa0251320-mRNA-1 |
| chr2_2 | five_prime_UTR | 40840439 | 40840468 | 40840439 | ID=Msa0251320-mRNA-1:five_prime_utr;Parent=Msa0251320-mRNA-1 |
| chr2_2 | five_prime_UTR | 40840550 | 40840637 | 40840550 | ID=Msa0251320-mRNA-1:five_prime_utr;Parent=Msa0251320-mRNA-1 |
| chr2_2 | five_prime_UTR | 40840720 | 40840865 | 40840720 | ID=Msa0251320-mRNA-1:five_prime_utr;Parent=Msa0251320-mRNA-1 |
| chr2_2 | five_prime_UTR | 40841687 | 40841847 | 40841687 | ID=Msa0251320-mRNA-1:five_prime_utr;Parent=Msa0251320-mRNA-1 |
| chr2_2 | five_prime_UTR | 40844361 | 40844483 | 40844361 | ID=Msa0251320-mRNA-1:five_prime_utr;Parent=Msa0251320-mRNA-1 |
| chr2_2 | five_prime_UTR | 40844581 | 40844636 | 40844581 | ID=Msa0251320-mRNA-1:five_prime_utr;Parent=Msa0251320-mRNA-1 |
| chr2_2 | CDS | 40844637 | 40844660 | 40844637 | ID=Msa0251320-mRNA-1:cds;Parent=Msa0251320-mRNA-1 |
| chr2_2 | CDS | 40845009 | 40845260 | 40845009 | ID=Msa0251320-mRNA-1:cds;Parent=Msa0251320-mRNA-1 |
| chr2_2 | three_prime_UTR | 40845261 | 40845407 | 40845261 | ID=Msa0251320-mRNA-1:three_prime_utr;Parent=Msa0251320-mRNA-1 |
| chr2_2 | three_prime_UTR | 40845503 | 40846157 | 40845503 | ID=Msa0251320-mRNA-1:three_prime_utr;Parent=Msa0251320-mRNA-1 |
| Gene Sequence |
| Protein sequence |
