Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0161900 | sp|Q9SZL8|FRS5_ARATH | 36.242 | 149 | 74 | 6 | 2 | 132 | 21 | 166 | 6.14e-13 | 68.2 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0161900 | A0A392N1M6 | 79.389 | 131 | 25 | 1 | 1 | 129 | 1 | 131 | 9.10e-70 | 215 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0161900 | TF | FAR1 |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0006110 | Msa0161900 | 0.820403 | 6.988232e-53 | -8.615850e-47 |
| Msa0011170 | Msa0161900 | 0.805568 | 1.253858e-49 | -8.615850e-47 |
| Msa0014710 | Msa0161900 | 0.826657 | 2.404909e-54 | -8.615850e-47 |
| Msa0015390 | Msa0161900 | 0.805230 | 1.475619e-49 | -8.615850e-47 |
| Msa0017070 | Msa0161900 | 0.801929 | 7.140381e-49 | -8.615850e-47 |
| Msa0020410 | Msa0161900 | 0.820938 | 5.264004e-53 | -8.615850e-47 |
| Msa0026910 | Msa0161900 | 0.806487 | 8.030822e-50 | -8.615850e-47 |
| Msa0036140 | Msa0161900 | 0.817479 | 3.228177e-52 | -8.615850e-47 |
| Msa0037880 | Msa0161900 | 0.805736 | 1.155876e-49 | -8.615850e-47 |
| Msa0068740 | Msa0161900 | -0.802050 | 6.742326e-49 | -8.615850e-47 |
| Msa0075880 | Msa0161900 | 0.811730 | 6.049739e-51 | -8.615850e-47 |
| Msa0086420 | Msa0161900 | 0.800641 | 1.309972e-48 | -8.615850e-47 |
| Msa0095560 | Msa0161900 | 0.805889 | 1.073209e-49 | -8.615850e-47 |
| Msa0096450 | Msa0161900 | 0.804891 | 1.737836e-49 | -8.615850e-47 |
| Msa0100090 | Msa0161900 | 0.800325 | 1.519367e-48 | -8.615850e-47 |
| Msa0112750 | Msa0161900 | 0.800487 | 1.408765e-48 | -8.615850e-47 |
| Msa0114060 | Msa0161900 | 0.805008 | 1.642164e-49 | -8.615850e-47 |
| Msa0114430 | Msa0161900 | 0.802417 | 5.666584e-49 | -8.615850e-47 |
| Msa0116770 | Msa0161900 | 0.802592 | 5.213892e-49 | -8.615850e-47 |
| Msa0117770 | Msa0161900 | 0.819732 | 9.951531e-53 | -8.615850e-47 |
| Msa0131770 | Msa0161900 | 0.823505 | 1.335873e-53 | -8.615850e-47 |
| Msa0140860 | Msa0161900 | 0.803374 | 3.594532e-49 | -8.615850e-47 |
| Msa0143930 | Msa0161900 | 0.800863 | 1.180242e-48 | -8.615850e-47 |
| Msa0159770 | Msa0161900 | 0.816876 | 4.411859e-52 | -8.615850e-47 |
| Msa0161900 | Msa0178930 | 0.821753 | 3.413831e-53 | -8.615850e-47 |
| Msa0161900 | Msa0187250 | 0.820551 | 6.461889e-53 | -8.615850e-47 |
| Msa0161900 | Msa0188830 | 0.805891 | 1.072519e-49 | -8.615850e-47 |
| Msa0161900 | Msa0206010 | 0.829526 | 4.900783e-55 | -8.615850e-47 |
| Msa0161900 | Msa0208090 | 0.809580 | 1.763700e-50 | -8.615850e-47 |
| Msa0161900 | Msa0210450 | 0.815204 | 1.042038e-51 | -8.615850e-47 |
| Msa0161900 | Msa0212990 | 0.808111 | 3.635601e-50 | -8.615850e-47 |
| Msa0161900 | Msa0213520 | 0.801715 | 7.900982e-49 | -8.615850e-47 |
| Msa0161900 | Msa0217680 | 0.800550 | 1.367598e-48 | -8.615850e-47 |
| Msa0161900 | Msa0223010 | 0.813196 | 2.893168e-51 | -8.615850e-47 |
| Msa0161900 | Msa0223910 | 0.804733 | 1.874563e-49 | -8.615850e-47 |
| Msa0161900 | Msa0233300 | 0.838252 | 3.211522e-57 | -8.615850e-47 |
| Msa0161900 | Msa0243710 | 0.812529 | 4.050280e-51 | -8.615850e-47 |
| Msa0161900 | Msa0249100 | 0.802385 | 5.752437e-49 | -8.615850e-47 |
| Msa0161900 | Msa0258760 | 0.818198 | 2.221696e-52 | -8.615850e-47 |
| Msa0161900 | Msa0261720 | 0.801941 | 7.100052e-49 | -8.615850e-47 |
| Msa0161900 | Msa0264150 | 0.804019 | 2.640485e-49 | -8.615850e-47 |
| Msa0161900 | Msa0285450 | 0.807103 | 5.953031e-50 | -8.615850e-47 |
| Msa0161900 | Msa0286670 | 0.804001 | 2.663580e-49 | -8.615850e-47 |
| Msa0161900 | Msa0287410 | 0.827563 | 1.459876e-54 | -8.615850e-47 |
| Msa0161900 | Msa0288100 | 0.811715 | 6.095017e-51 | -8.615850e-47 |
| Msa0161900 | Msa0292030 | 0.800261 | 1.565647e-48 | -8.615850e-47 |
| Msa0161900 | Msa0292930 | 0.805166 | 1.521857e-49 | -8.615850e-47 |
| Msa0161900 | Msa0305190 | 0.802929 | 4.442463e-49 | -8.615850e-47 |
| Msa0161900 | Msa0306210 | -0.820331 | 7.258125e-53 | -8.615850e-47 |
| Msa0161900 | Msa0319170 | 0.839841 | 1.244568e-57 | -8.615850e-47 |
| Msa0161900 | Msa0326110 | 0.831768 | 1.384450e-55 | -8.615850e-47 |
| Msa0161900 | Msa0326520 | 0.836215 | 1.066242e-56 | -8.615850e-47 |
| Msa0161900 | Msa0330340 | 0.808788 | 2.607609e-50 | -8.615850e-47 |
| Msa0161900 | Msa0336320 | 0.808079 | 3.693415e-50 | -8.615850e-47 |
| Msa0161900 | Msa0339620 | 0.814475 | 1.511524e-51 | -8.615850e-47 |
| Msa0161900 | Msa0340450 | 0.817844 | 2.670563e-52 | -8.615850e-47 |
| Msa0161900 | Msa0344690 | -0.804630 | 1.970319e-49 | -8.615850e-47 |
| Msa0161900 | Msa0344980 | 0.802591 | 5.216664e-49 | -8.615850e-47 |
| Msa0161900 | Msa0345970 | 0.807636 | 4.589322e-50 | -8.615850e-47 |
| Msa0161900 | Msa0359030 | 0.802660 | 5.050093e-49 | -8.615850e-47 |
| Msa0161900 | Msa0373450 | 0.817528 | 3.146871e-52 | -8.615850e-47 |
| Msa0161900 | Msa0376590 | 0.800117 | 1.674782e-48 | -8.615850e-47 |
| Msa0161900 | Msa0376910 | 0.804742 | 1.866667e-49 | -8.615850e-47 |
| Msa0161900 | Msa0379640 | 0.823640 | 1.242330e-53 | -8.615850e-47 |
| Msa0161900 | Msa0392040 | -0.800871 | 1.175825e-48 | -8.615850e-47 |
| Msa0161900 | Msa0402290 | 0.810278 | 1.247935e-50 | -8.615850e-47 |
| Msa0161900 | Msa0412840 | 0.821559 | 3.786242e-53 | -8.615850e-47 |
| Msa0161900 | Msa0419980 | 0.804460 | 2.137495e-49 | -8.615850e-47 |
| Msa0161900 | Msa0426900 | 0.814949 | 1.187463e-51 | -8.615850e-47 |
| Msa0161900 | Msa0431690 | 0.820170 | 7.901538e-53 | -8.615850e-47 |
| Msa0161900 | Msa0433410 | -0.818436 | 1.962339e-52 | -8.615850e-47 |
| Msa0161900 | Msa0436760 | 0.801897 | 7.247972e-49 | -8.615850e-47 |
| Msa0161900 | Msa0453330 | 0.814233 | 1.709751e-51 | -8.615850e-47 |
| Msa0161900 | Msa0455760 | 0.806813 | 6.855138e-50 | -8.615850e-47 |
| Msa0161900 | Msa0469940 | -0.801554 | 8.522697e-49 | -8.615850e-47 |
| Msa0161900 | Msa0471900 | 0.814018 | 1.907196e-51 | -8.615850e-47 |
| Msa0161900 | Msa0477130 | -0.825216 | 5.289916e-54 | -8.615850e-47 |
| Msa0161900 | Msa0479340 | 0.827414 | 1.584892e-54 | -8.615850e-47 |
| Msa0161900 | Msa0484780 | 0.847778 | 9.321034e-60 | -8.615850e-47 |
| Msa0161900 | Msa0512900 | 0.818911 | 1.531271e-52 | -8.615850e-47 |
| Msa0161900 | Msa0518380 | 0.802493 | 5.466528e-49 | -8.615850e-47 |
| Msa0161900 | Msa0532350 | 0.817524 | 3.153753e-52 | -8.615850e-47 |
| Msa0161900 | Msa0536220 | 0.811634 | 6.346518e-51 | -8.615850e-47 |
| Msa0161900 | Msa0541130 | 0.811368 | 7.248812e-51 | -8.615850e-47 |
| Msa0161900 | Msa0545700 | 0.807607 | 4.654045e-50 | -8.615850e-47 |
| Msa0161900 | Msa0558690 | 0.802839 | 4.637059e-49 | -8.615850e-47 |
| Msa0161900 | Msa0565350 | 0.826521 | 2.591600e-54 | -8.615850e-47 |
| Msa0161900 | Msa0565450 | 0.824139 | 9.489219e-54 | -8.615850e-47 |
| Msa0161900 | Msa0620960 | 0.812056 | 5.135728e-51 | -8.615850e-47 |
| Msa0161900 | Msa0637070 | 0.800695 | 1.277414e-48 | -8.615850e-47 |
| Msa0161900 | Msa0638070 | 0.808932 | 2.428404e-50 | -8.615850e-47 |
| Msa0161900 | Msa0648080 | 0.804027 | 2.630996e-49 | -8.615850e-47 |
| Msa0161900 | Msa0657970 | 0.818656 | 1.748983e-52 | -8.615850e-47 |
| Msa0161900 | Msa0659400 | 0.806077 | 9.801681e-50 | -8.615850e-47 |
| Msa0161900 | Msa0663240 | 0.809277 | 2.048954e-50 | -8.615850e-47 |
| Msa0161900 | Msa0669440 | 0.812352 | 4.427145e-51 | -8.615850e-47 |
| Msa0161900 | Msa0673460 | 0.822752 | 2.002025e-53 | -8.615850e-47 |
| Msa0161900 | Msa0685920 | 0.801204 | 1.005178e-48 | -8.615850e-47 |
| Msa0161900 | Msa0688070 | 0.806966 | 6.363610e-50 | -8.615850e-47 |
| Msa0161900 | Msa0688480 | 0.811087 | 8.343383e-51 | -8.615850e-47 |
| Msa0161900 | Msa0693380 | 0.818633 | 1.770490e-52 | -8.615850e-47 |
| Msa0161900 | Msa0724210 | 0.806202 | 9.223755e-50 | -8.615850e-47 |
| Msa0161900 | Msa0731180 | 0.826100 | 3.265593e-54 | -8.615850e-47 |
| Msa0161900 | Msa0731940 | 0.820482 | 6.700408e-53 | -8.615850e-47 |
| Msa0161900 | Msa0743720 | 0.813127 | 2.994754e-51 | -8.615850e-47 |
| Msa0161900 | Msa0745790 | 0.807610 | 4.647876e-50 | -8.615850e-47 |
| Msa0161900 | Msa0753720 | 0.804868 | 1.756904e-49 | -8.615850e-47 |
| Msa0161900 | Msa0760130 | 0.809877 | 1.523037e-50 | -8.615850e-47 |
| Msa0161900 | Msa0762360 | 0.810225 | 1.281063e-50 | -8.615850e-47 |
| Msa0161900 | Msa0763890 | 0.802138 | 6.468039e-49 | -8.615850e-47 |
| Msa0161900 | Msa0766630 | 0.847147 | 1.389559e-59 | -8.615850e-47 |
| Msa0161900 | Msa0771580 | 0.802353 | 5.839801e-49 | -8.615850e-47 |
| Msa0161900 | Msa0777230 | 0.817522 | 3.156911e-52 | -8.615850e-47 |
| Msa0161900 | Msa0794700 | 0.808433 | 3.103960e-50 | -8.615850e-47 |
| Msa0161900 | Msa0806090 | 0.802113 | 6.544553e-49 | -8.615850e-47 |
| Msa0161900 | Msa0810220 | 0.826057 | 3.342951e-54 | -8.615850e-47 |
| Msa0161900 | Msa0816710 | 0.803348 | 3.638660e-49 | -8.615850e-47 |
| Msa0161900 | Msa0820770 | 0.812204 | 4.767873e-51 | -8.615850e-47 |
| Msa0161900 | Msa0820850 | 0.829240 | 5.750644e-55 | -8.615850e-47 |
| Msa0161900 | Msa0831850 | 0.813330 | 2.703212e-51 | -8.615850e-47 |
| Msa0161900 | Msa0832340 | 0.811744 | 6.008049e-51 | -8.615850e-47 |
| Msa0161900 | Msa0833460 | 0.800677 | 1.288082e-48 | -8.615850e-47 |
| Msa0161900 | Msa0840820 | 0.805735 | 1.156171e-49 | -8.615850e-47 |
| Msa0161900 | Msa0842650 | 0.800307 | 1.532619e-48 | -8.615850e-47 |
| Msa0161900 | Msa0861090 | 0.804862 | 1.761978e-49 | -8.615850e-47 |
| Msa0161900 | Msa0861130 | 0.827456 | 1.548586e-54 | -8.615850e-47 |
| Msa0161900 | Msa0866410 | 0.805519 | 1.283382e-49 | -8.615850e-47 |
| Msa0161900 | Msa0876580 | 0.803092 | 4.110760e-49 | -8.615850e-47 |
| Msa0161900 | Msa0895950 | 0.802132 | 6.485073e-49 | -8.615850e-47 |
| Msa0161900 | Msa0907070 | 0.824468 | 7.943541e-54 | -8.615850e-47 |
| Msa0161900 | Msa0910000 | 0.812967 | 3.248165e-51 | -8.615850e-47 |
| Msa0161900 | Msa0924310 | 0.814906 | 1.213420e-51 | -8.615850e-47 |
| Msa0161900 | Msa0925290 | 0.826780 | 2.247897e-54 | -8.615850e-47 |
| Msa0161900 | Msa0927380 | 0.808410 | 3.139616e-50 | -8.615850e-47 |
| Msa0161900 | Msa0933100 | 0.804241 | 2.374210e-49 | -8.615850e-47 |
| Msa0161900 | Msa0936300 | 0.802029 | 6.811201e-49 | -8.615850e-47 |
| Msa0161900 | Msa0953120 | 0.808911 | 2.454580e-50 | -8.615850e-47 |
| Msa0161900 | Msa0969450 | 0.824870 | 6.385544e-54 | -8.615850e-47 |
| Msa0161900 | Msa0969520 | 0.829974 | 3.813056e-55 | -8.615850e-47 |
| Msa0161900 | Msa0969600 | 0.804360 | 2.242779e-49 | -8.615850e-47 |
| Msa0161900 | Msa1014540 | 0.811073 | 8.400312e-51 | -8.615850e-47 |
| Msa0161900 | Msa1030970 | 0.804596 | 2.002097e-49 | -8.615850e-47 |
| Msa0161900 | Msa1034150 | 0.805371 | 1.378685e-49 | -8.615850e-47 |
| Msa0161900 | Msa1036610 | 0.812530 | 4.048281e-51 | -8.615850e-47 |
| Msa0161900 | Msa1054990 | 0.807536 | 4.818459e-50 | -8.615850e-47 |
| Msa0161900 | Msa1059570 | 0.803514 | 3.362304e-49 | -8.615850e-47 |
| Msa0161900 | Msa1065610 | 0.802109 | 6.558220e-49 | -8.615850e-47 |
| Msa0161900 | Msa1070010 | 0.803575 | 3.265860e-49 | -8.615850e-47 |
| Msa0161900 | Msa1073070 | -0.807476 | 4.961328e-50 | -8.615850e-47 |
| Msa0161900 | Msa1075220 | -0.817127 | 3.874410e-52 | -8.615850e-47 |
| Msa0161900 | Msa1081590 | 0.821247 | 4.467643e-53 | -8.615850e-47 |
| Msa0161900 | Msa1082500 | 0.856305 | 3.519248e-62 | -8.615850e-47 |
| Msa0161900 | Msa1082580 | 0.817134 | 3.860016e-52 | -8.615850e-47 |
| Msa0161900 | Msa1104090 | 0.805209 | 1.491127e-49 | -8.615850e-47 |
| Msa0161900 | Msa1111180 | 0.811071 | 8.410046e-51 | -8.615850e-47 |
| Msa0161900 | Msa1121490 | 0.805870 | 1.083399e-49 | -8.615850e-47 |
| Msa0161900 | Msa1131220 | 0.815507 | 8.925554e-52 | -8.615850e-47 |
| Msa0161900 | Msa1137570 | 0.813647 | 2.302832e-51 | -8.615850e-47 |
| Msa0161900 | Msa1162550 | -0.819332 | 1.228129e-52 | -8.615850e-47 |
| Msa0161900 | Msa1172400 | 0.803243 | 3.824857e-49 | -8.615850e-47 |
| Msa0161900 | Msa1174040 | 0.817472 | 3.239322e-52 | -8.615850e-47 |
| Msa0161900 | Msa1185980 | 0.800167 | 1.636404e-48 | -8.615850e-47 |
| Msa0161900 | Msa1186060 | 0.816407 | 5.619557e-52 | -8.615850e-47 |
| Msa0161900 | Msa1193290 | 0.829993 | 3.770799e-55 | -8.615850e-47 |
| Msa0161900 | Msa1198400 | 0.808732 | 2.680547e-50 | -8.615850e-47 |
| Msa0161900 | Msa1204530 | 0.805564 | 1.256201e-49 | -8.615850e-47 |
| Msa0161900 | Msa1224480 | 0.808157 | 3.555928e-50 | -8.615850e-47 |
| Msa0161900 | Msa1224580 | -0.816805 | 4.575373e-52 | -8.615850e-47 |
| Msa0161900 | Msa1233890 | 0.800884 | 1.168663e-48 | -8.615850e-47 |
| Msa0161900 | Msa1250890 | 0.804692 | 1.911898e-49 | -8.615850e-47 |
| Msa0161900 | Msa1276440 | 0.817628 | 2.987486e-52 | -8.615850e-47 |
| Msa0161900 | Msa1280490 | 0.933638 | 1.383841e-95 | -8.615850e-47 |
| Msa0161900 | Msa1284680 | 0.821616 | 3.672316e-53 | -8.615850e-47 |
| Msa0161900 | Msa1305190 | 0.819774 | 9.736144e-53 | -8.615850e-47 |
| Msa0161900 | Msa1305340 | 0.831338 | 1.766859e-55 | -8.615850e-47 |
| Msa0161900 | Msa1305350 | 0.802786 | 4.754723e-49 | -8.615850e-47 |
| Msa0161900 | Msa1309030 | 0.801661 | 8.104432e-49 | -8.615850e-47 |
| Msa0161900 | Msa1314340 | 0.803735 | 3.024744e-49 | -8.615850e-47 |
| Msa0161900 | Msa1325860 | -0.814599 | 1.419145e-51 | -8.615850e-47 |
| Msa0161900 | Msa1327680 | 0.808964 | 2.390562e-50 | -8.615850e-47 |
| Msa0161900 | Msa1329700 | 0.810259 | 1.260147e-50 | -8.615850e-47 |
| Msa0161900 | Msa1331000 | 0.824883 | 6.342064e-54 | -8.615850e-47 |
| Msa0161900 | Msa1343760 | 0.807223 | 5.615193e-50 | -8.615850e-47 |
| Msa0161900 | Msa1348760 | 0.819323 | 1.233895e-52 | -8.615850e-47 |
| Msa0161900 | Msa1348950 | 0.818194 | 2.225953e-52 | -8.615850e-47 |
| Msa0161900 | Msa1353470 | 0.830410 | 2.982790e-55 | -8.615850e-47 |
| Msa0161900 | Msa1359040 | 0.808186 | 3.505416e-50 | -8.615850e-47 |
| Msa0161900 | Msa1362880 | 0.801332 | 9.464362e-49 | -8.615850e-47 |
| Msa0161900 | Msa1372760 | 0.819443 | 1.158242e-52 | -8.615850e-47 |
| Msa0161900 | Msa1372980 | 0.809205 | 2.123294e-50 | -8.615850e-47 |
| Msa0161900 | Msa1373030 | 0.839036 | 2.014331e-57 | -8.615850e-47 |
| Msa0161900 | Msa1384350 | 0.802031 | 6.802883e-49 | -8.615850e-47 |
| Msa0161900 | Msa1392260 | 0.820365 | 7.126915e-53 | -8.615850e-47 |
| Msa0161900 | Msa1393040 | 0.807682 | 4.486110e-50 | -8.615850e-47 |
| Msa0161900 | Msa1397120 | 0.829878 | 4.023438e-55 | -8.615850e-47 |
| Msa0161900 | Msa1403340 | 0.805165 | 1.522675e-49 | -8.615850e-47 |
| Msa0161900 | Msa1403480 | 0.806094 | 9.719406e-50 | -8.615850e-47 |
| Msa0161900 | Msa1403890 | 0.825305 | 5.040542e-54 | -8.615850e-47 |
| Msa0161900 | Msa1411020 | 0.817919 | 2.568804e-52 | -8.615850e-47 |
| Msa0161900 | Msa1419960 | 0.806156 | 9.430680e-50 | -8.615850e-47 |
| Msa0161900 | Msa1420490 | 0.809719 | 1.646341e-50 | -8.615850e-47 |
| Msa0161900 | Msa1420820 | 0.800344 | 1.506151e-48 | -8.615850e-47 |
| Msa0161900 | Msa1423390 | 0.811119 | 8.211621e-51 | -8.615850e-47 |
| Msa0161900 | Msa1423820 | 0.801690 | 7.993577e-49 | -8.615850e-47 |
| Msa0161900 | Msa1424290 | 0.815716 | 8.018438e-52 | -8.615850e-47 |
| Msa0161900 | Msa1424450 | 0.810952 | 8.922542e-51 | -8.615850e-47 |
| Msa0161900 | Msa1424680 | 0.809478 | 1.854717e-50 | -8.615850e-47 |
| Msa0161900 | Msa1427230 | 0.822595 | 2.177498e-53 | -8.615850e-47 |
| Msa0161900 | Msa1429900 | 0.806856 | 6.714718e-50 | -8.615850e-47 |
| Msa0161900 | Msa1434350 | 0.816619 | 5.036656e-52 | -8.615850e-47 |
| Msa0161900 | Msa1435270 | 0.810065 | 1.387275e-50 | -8.615850e-47 |
| Msa0161900 | Msa1439320 | 0.820076 | 8.303842e-53 | -8.615850e-47 |
| Msa0161900 | Msa1440370 | 0.812756 | 3.612205e-51 | -8.615850e-47 |
| Msa0161900 | Msa1440810 | 0.810453 | 1.144121e-50 | -8.615850e-47 |
| Msa0161900 | Msa1440940 | 0.813471 | 2.517233e-51 | -8.615850e-47 |
| Msa0161900 | Msa1445030 | 0.801962 | 7.028099e-49 | -8.615850e-47 |
| Msa0161900 | Msa1451620 | -0.814501 | 1.492067e-51 | -8.615850e-47 |
| Msa0161900 | Msa1453560 | 0.812709 | 3.697882e-51 | -8.615850e-47 |
| Msa0161900 | Msa1460050 | 0.809525 | 1.812206e-50 | -8.615850e-47 |
| Msa0161900 | Msa1460830 | 0.826409 | 2.756986e-54 | -8.615850e-47 |
| Msa0161900 | Msa1462070 | 0.801591 | 8.377739e-49 | -8.615850e-47 |
| Msa0161900 | Msa1462930 | 0.801226 | 9.951233e-49 | -8.615850e-47 |
| Msa0161900 | Msa1466540 | 0.836982 | 6.799557e-57 | -8.615850e-47 |
| Msa0161900 | Msa1466730 | 0.807075 | 6.033276e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0161900 | MtrunA17_Chr1g0202341 | 63.359 | 131 | 46 | 1 | 4 | 132 | 12 | 142 | 1.67e-50 | 170 |
| Msa0161900 | MtrunA17_Chr3g0077241 | 70.652 | 92 | 21 | 2 | 6 | 94 | 1 | 89 | 1.55e-39 | 129 |
| Msa0161900 | MtrunA17_Chr4g0052331 | 57.895 | 95 | 38 | 1 | 1 | 93 | 1 | 95 | 3.29e-33 | 112 |
| Msa0161900 | MtrunA17_Chr2g0329361 | 38.947 | 95 | 57 | 1 | 39 | 132 | 59 | 153 | 3.37e-18 | 78.2 |
| Msa0161900 | MtrunA17_Chr2g0329421 | 33.333 | 117 | 66 | 4 | 23 | 132 | 5 | 116 | 7.27e-16 | 71.2 |
| Msa0161900 | MtrunA17_Chr4g0033611 | 32.000 | 125 | 70 | 4 | 19 | 133 | 47 | 166 | 2.99e-15 | 70.1 |
| Msa0161900 | MtrunA17_Chr5g0448761 | 45.918 | 98 | 48 | 3 | 39 | 132 | 58 | 154 | 2.04e-13 | 66.2 |
| Msa0161900 | MtrunA17_Chr3g0078041 | 35.789 | 95 | 57 | 3 | 40 | 132 | 49 | 141 | 2.89e-12 | 61.6 |
| Msa0161900 | MtrunA17_Chr2g0287061 | 31.068 | 103 | 55 | 2 | 31 | 132 | 173 | 260 | 3.70e-12 | 62.8 |
| Msa0161900 | MtrunA17_Chr6g0458391 | 36.111 | 108 | 51 | 3 | 36 | 140 | 86 | 178 | 2.03e-11 | 60.5 |
| Msa0161900 | MtrunA17_Chr7g0233911 | 36.458 | 96 | 55 | 3 | 40 | 132 | 33 | 125 | 2.62e-11 | 58.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0161900 | AT3G59470.3 | 36.170 | 94 | 56 | 2 | 40 | 132 | 69 | 159 | 2.88e-15 | 70.5 |
| Msa0161900 | AT3G59470.1 | 36.170 | 94 | 56 | 2 | 40 | 132 | 69 | 159 | 2.88e-15 | 70.5 |
| Msa0161900 | AT3G59470.2 | 36.170 | 94 | 56 | 2 | 40 | 132 | 81 | 171 | 3.21e-15 | 70.5 |
| Msa0161900 | AT4G38180.1 | 36.242 | 149 | 74 | 6 | 2 | 132 | 21 | 166 | 6.24e-14 | 68.2 |
| Msa0161900 | AT3G06250.2 | 35.789 | 95 | 45 | 3 | 39 | 132 | 26 | 105 | 7.08e-13 | 65.1 |
| Msa0161900 | AT3G06250.1 | 35.789 | 95 | 45 | 3 | 39 | 132 | 26 | 105 | 7.08e-13 | 65.1 |
| Msa0161900 | AT3G06250.3 | 35.789 | 95 | 45 | 3 | 39 | 132 | 26 | 105 | 7.08e-13 | 65.1 |
| Msa0161900 | AT3G07500.1 | 38.947 | 95 | 55 | 2 | 39 | 132 | 31 | 123 | 2.45e-12 | 62.0 |
| Msa0161900 | AT5G18960.2 | 33.684 | 95 | 47 | 3 | 39 | 132 | 41 | 120 | 3.89e-12 | 62.8 |
| Msa0161900 | AT5G18960.1 | 33.684 | 95 | 47 | 3 | 39 | 132 | 41 | 120 | 3.89e-12 | 62.8 |
Find 39 sgRNAs with CRISPR-Local
Find 114 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATTCCTTCAAAGGGCTCTA+AGG | 0.261818 | 1_4:-38015929 | None:intergenic |
| GAAGAAGATTATGGAAGTTT+TGG | 0.293650 | 1_4:+38015516 | Msa0161900:five_prime_UTR |
| AGAACGGATGGTAGAGTAAT+TGG | 0.359499 | 1_4:+38016045 | Msa0161900:CDS |
| ACAAGGTACGCGAGGAATAA+AGG | 0.387113 | 1_4:+38015988 | Msa0161900:CDS |
| CTTCTTCGAAGACGGTTCTC+AGG | 0.416570 | 1_4:-38015500 | None:intergenic |
| CATGAACATACCAACATGAT+TGG | 0.442395 | 1_4:+38015844 | Msa0161900:CDS |
| ACCGTCTTCGAAGAAGATTA+TGG | 0.460480 | 1_4:+38015507 | Msa0161900:five_prime_UTR |
| CTTAGAGCCCTTTGAAGGAA+TGG | 0.476103 | 1_4:+38015930 | Msa0161900:CDS |
| ATTCCTTCAAAGGGCTCTAA+GGG | 0.488264 | 1_4:-38015928 | None:intergenic |
| CTCCCCTTAGAGCCCTTTGA+AGG | 0.489876 | 1_4:+38015925 | Msa0161900:CDS |
| CGTAAACTCCATTCCTTCAA+AGG | 0.494092 | 1_4:-38015938 | None:intergenic |
| TCAATACAACAAAACTCAAT+CGG | 0.502319 | 1_4:+38015370 | Msa0161900:five_prime_UTR |
| ATATCAAGAAAAGTGAAGAT+AGG | 0.503755 | 1_4:+38016181 | Msa0161900:CDS |
| TCAAGAGATTCTTTGTTCAA+AGG | 0.507548 | 1_4:+38016068 | Msa0161900:CDS |
| GGCTCTAAGGGGAGCTCCAA+TGG | 0.508044 | 1_4:-38015916 | None:intergenic |
| TCCATAATCTTCTTCGAAGA+CGG | 0.517402 | 1_4:-38015508 | None:intergenic |
| AGATTCTTTGTTCAAAGGAG+GGG | 0.523644 | 1_4:+38016073 | Msa0161900:CDS |
| TCTCAATGATAGACTACCAT+TGG | 0.530176 | 1_4:+38015900 | Msa0161900:CDS |
| TCAAACGAACAAAAGAAAGT+AGG | 0.536997 | 1_4:-38015436 | None:intergenic |
| GAGATTCTTTGTTCAAAGGA+GGG | 0.539548 | 1_4:+38016072 | Msa0161900:CDS |
| ACTGTTTGTGTTGAAGCTGC+AGG | 0.548752 | 1_4:+38016207 | Msa0161900:CDS |
| AGAGATTCTTTGTTCAAAGG+AGG | 0.550163 | 1_4:+38016071 | Msa0161900:CDS |
| GTAAACTCCATTCCTTCAAA+GGG | 0.551143 | 1_4:-38015937 | None:intergenic |
| TTTGTGTTGAAGCTGCAGGC+AGG | 0.559406 | 1_4:+38016211 | Msa0161900:CDS |
| TCAAACAAGGGTAGGATGCA+AGG | 0.583329 | 1_4:+38016149 | Msa0161900:CDS |
| AATGGTAGTCTTATTGTACA+TGG | 0.595875 | 1_4:+38016126 | Msa0161900:CDS |
| TCAAGAAAAGTGAAGATAGG+TGG | 0.599813 | 1_4:+38016184 | Msa0161900:CDS |
| TTATTGTACATGGTCAAACA+AGG | 0.601311 | 1_4:+38016136 | Msa0161900:CDS |
| ATCATCTGAGCCAATCATGT+TGG | 0.609119 | 1_4:-38015854 | None:intergenic |
| GTTACTAAATCAAGAACGGA+TGG | 0.614185 | 1_4:+38016033 | Msa0161900:CDS |
| AATGGTAGTCTATCATTGAG+AGG | 0.621900 | 1_4:-38015898 | None:intergenic |
| TGGTCTGAGACATTATAACC+AGG | 0.630311 | 1_4:+38015536 | Msa0161900:five_prime_UTR |
| AGACGGTTCTCAGGTCGTAA+CGG | 0.630551 | 1_4:-38015491 | None:intergenic |
| GTACATGGTCAAACAAGGGT+AGG | 0.635603 | 1_4:+38016141 | Msa0161900:CDS |
| TCGTGTTACTAAATCAAGAA+CGG | 0.641576 | 1_4:+38016029 | Msa0161900:CDS |
| AATACTACACAAGGTACGCG+AGG | 0.651596 | 1_4:+38015980 | Msa0161900:CDS |
| TTCCTTCAAAGGGCTCTAAG+GGG | 0.687755 | 1_4:-38015927 | None:intergenic |
| TATTGTACATGGTCAAACAA+GGG | 0.709401 | 1_4:+38016137 | Msa0161900:CDS |
| CGGTTCTCAGGTCGTAACGG+CGG | 0.719840 | 1_4:-38015488 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTCTTTTTTCAAATTTTTTT+GGG | - | chr1_4:38016106-38016125 | None:intergenic | 10.0% |
| !!! | TTTCTTTTTTCAAATTTTTT+TGG | - | chr1_4:38016107-38016126 | None:intergenic | 10.0% |
| !! | AAAAATTTGAAAAAAGAAAA+TGG | + | chr1_4:38016108-38016127 | Msa0161900:CDS | 10.0% |
| !!! | TTCTTTTTTCAAATTTTTTT+GGG | - | chr1_4:38016106-38016125 | None:intergenic | 10.0% |
| !!! | TTTCTTTTTTCAAATTTTTT+TGG | - | chr1_4:38016107-38016126 | None:intergenic | 10.0% |
| !! | AAAAATTTGAAAAAAGAAAA+TGG | + | chr1_4:38016108-38016127 | Msa0161900:CDS | 10.0% |
| !! | TTCATATTTAAACATGTTTG+TGG | + | chr1_4:38015674-38015693 | Msa0161900:intron | 20.0% |
| !!! | TTAACTTGCTTTTCTAAATA+TGG | + | chr1_4:38015747-38015766 | Msa0161900:intron | 20.0% |
| !! | ATGTAAAAAAATACTACACA+AGG | + | chr1_4:38015971-38015990 | Msa0161900:CDS | 20.0% |
| !! | TTCATATTTAAACATGTTTG+TGG | + | chr1_4:38015674-38015693 | Msa0161900:intron | 20.0% |
| !!! | TTAACTTGCTTTTCTAAATA+TGG | + | chr1_4:38015747-38015766 | Msa0161900:intron | 20.0% |
| !! | ATGTAAAAAAATACTACACA+AGG | + | chr1_4:38015971-38015990 | Msa0161900:CDS | 20.0% |
| !!! | ATTGAGTTTTGTTGTATTGA+CGG | - | chr1_4:38015370-38015389 | None:intergenic | 25.0% |
| ! | TCAATACAACAAAACTCAAT+CGG | + | chr1_4:38015370-38015389 | Msa0161900:five_prime_UTR | 25.0% |
| !! | TGAATTTTATTCAGCATAAC+AGG | + | chr1_4:38015779-38015798 | Msa0161900:intron | 25.0% |
| ! | ATATCAAGAAAAGTGAAGAT+AGG | + | chr1_4:38016181-38016200 | Msa0161900:CDS | 25.0% |
| !!! | ATTGAGTTTTGTTGTATTGA+CGG | - | chr1_4:38015370-38015389 | None:intergenic | 25.0% |
| ! | TCAATACAACAAAACTCAAT+CGG | + | chr1_4:38015370-38015389 | Msa0161900:five_prime_UTR | 25.0% |
| !! | TGAATTTTATTCAGCATAAC+AGG | + | chr1_4:38015779-38015798 | Msa0161900:intron | 25.0% |
| ! | ATATCAAGAAAAGTGAAGAT+AGG | + | chr1_4:38016181-38016200 | Msa0161900:CDS | 25.0% |
| !!! | TCTCTCTCTTTTTCAATTGA+AGG | + | chr1_4:38015394-38015413 | Msa0161900:five_prime_UTR | 30.0% |
| TCAAACGAACAAAAGAAAGT+AGG | - | chr1_4:38015439-38015458 | None:intergenic | 30.0% | |
| ! | GAAGAAGATTATGGAAGTTT+TGG | + | chr1_4:38015516-38015535 | Msa0161900:five_prime_UTR | 30.0% |
| TTGTAGAACTAAAGAAACCA+AGG | - | chr1_4:38015585-38015604 | None:intergenic | 30.0% | |
| ! | AGTCTCCAAAGATTTTTGTT+TGG | + | chr1_4:38015642-38015661 | Msa0161900:intron | 30.0% |
| CATTGCCAAACAAAAATCTT+TGG | - | chr1_4:38015650-38015669 | None:intergenic | 30.0% | |
| !!! | TAAAGGTTTTAGCTTTCGTA+TGG | + | chr1_4:38016005-38016024 | Msa0161900:CDS | 30.0% |
| !!! | AAAGGTTTTAGCTTTCGTAT+GGG | + | chr1_4:38016006-38016025 | Msa0161900:CDS | 30.0% |
| ! | TCGTGTTACTAAATCAAGAA+CGG | + | chr1_4:38016029-38016048 | Msa0161900:CDS | 30.0% |
| TCAAGAGATTCTTTGTTCAA+AGG | + | chr1_4:38016068-38016087 | Msa0161900:CDS | 30.0% | |
| !! | AATGGTAGTCTTATTGTACA+TGG | + | chr1_4:38016126-38016145 | Msa0161900:CDS | 30.0% |
| TTATTGTACATGGTCAAACA+AGG | + | chr1_4:38016136-38016155 | Msa0161900:CDS | 30.0% | |
| TATTGTACATGGTCAAACAA+GGG | + | chr1_4:38016137-38016156 | Msa0161900:CDS | 30.0% | |
| !!! | TCTCTCTCTTTTTCAATTGA+AGG | + | chr1_4:38015394-38015413 | Msa0161900:five_prime_UTR | 30.0% |
| TCAAACGAACAAAAGAAAGT+AGG | - | chr1_4:38015439-38015458 | None:intergenic | 30.0% | |
| ! | GAAGAAGATTATGGAAGTTT+TGG | + | chr1_4:38015516-38015535 | Msa0161900:five_prime_UTR | 30.0% |
| TTGTAGAACTAAAGAAACCA+AGG | - | chr1_4:38015585-38015604 | None:intergenic | 30.0% | |
| ! | AGTCTCCAAAGATTTTTGTT+TGG | + | chr1_4:38015642-38015661 | Msa0161900:intron | 30.0% |
| CATTGCCAAACAAAAATCTT+TGG | - | chr1_4:38015650-38015669 | None:intergenic | 30.0% | |
| !!! | TAAAGGTTTTAGCTTTCGTA+TGG | + | chr1_4:38016005-38016024 | Msa0161900:CDS | 30.0% |
| !!! | AAAGGTTTTAGCTTTCGTAT+GGG | + | chr1_4:38016006-38016025 | Msa0161900:CDS | 30.0% |
| ! | TCGTGTTACTAAATCAAGAA+CGG | + | chr1_4:38016029-38016048 | Msa0161900:CDS | 30.0% |
| TCAAGAGATTCTTTGTTCAA+AGG | + | chr1_4:38016068-38016087 | Msa0161900:CDS | 30.0% | |
| !! | AATGGTAGTCTTATTGTACA+TGG | + | chr1_4:38016126-38016145 | Msa0161900:CDS | 30.0% |
| TTATTGTACATGGTCAAACA+AGG | + | chr1_4:38016136-38016155 | Msa0161900:CDS | 30.0% | |
| TATTGTACATGGTCAAACAA+GGG | + | chr1_4:38016137-38016156 | Msa0161900:CDS | 30.0% | |
| ! | TTCTTTTGTTCGTTTGAACG+AGG | + | chr1_4:38015442-38015461 | Msa0161900:five_prime_UTR | 35.0% |
| TCCATAATCTTCTTCGAAGA+CGG | - | chr1_4:38015511-38015530 | None:intergenic | 35.0% | |
| AACCACATCTTCAATTACCT+TGG | + | chr1_4:38015565-38015584 | Msa0161900:intron | 35.0% | |
| AACCAAGGTAATTGAAGATG+TGG | - | chr1_4:38015570-38015589 | None:intergenic | 35.0% | |
| CATGAACATACCAACATGAT+TGG | + | chr1_4:38015844-38015863 | Msa0161900:CDS | 35.0% | |
| AATGGTAGTCTATCATTGAG+AGG | - | chr1_4:38015901-38015920 | None:intergenic | 35.0% | |
| TCTCAATGATAGACTACCAT+TGG | + | chr1_4:38015900-38015919 | Msa0161900:CDS | 35.0% | |
| GTAAACTCCATTCCTTCAAA+GGG | - | chr1_4:38015940-38015959 | None:intergenic | 35.0% | |
| GTTACTAAATCAAGAACGGA+TGG | + | chr1_4:38016033-38016052 | Msa0161900:CDS | 35.0% | |
| AGAGATTCTTTGTTCAAAGG+AGG | + | chr1_4:38016071-38016090 | Msa0161900:CDS | 35.0% | |
| GAGATTCTTTGTTCAAAGGA+GGG | + | chr1_4:38016072-38016091 | Msa0161900:CDS | 35.0% | |
| AGATTCTTTGTTCAAAGGAG+GGG | + | chr1_4:38016073-38016092 | Msa0161900:CDS | 35.0% | |
| TCAAGAAAAGTGAAGATAGG+TGG | + | chr1_4:38016184-38016203 | Msa0161900:CDS | 35.0% | |
| ! | TTCTTTTGTTCGTTTGAACG+AGG | + | chr1_4:38015442-38015461 | Msa0161900:five_prime_UTR | 35.0% |
| TCCATAATCTTCTTCGAAGA+CGG | - | chr1_4:38015511-38015530 | None:intergenic | 35.0% | |
| AACCACATCTTCAATTACCT+TGG | + | chr1_4:38015565-38015584 | Msa0161900:intron | 35.0% | |
| AACCAAGGTAATTGAAGATG+TGG | - | chr1_4:38015570-38015589 | None:intergenic | 35.0% | |
| CATGAACATACCAACATGAT+TGG | + | chr1_4:38015844-38015863 | Msa0161900:CDS | 35.0% | |
| AATGGTAGTCTATCATTGAG+AGG | - | chr1_4:38015901-38015920 | None:intergenic | 35.0% | |
| TCTCAATGATAGACTACCAT+TGG | + | chr1_4:38015900-38015919 | Msa0161900:CDS | 35.0% | |
| GTAAACTCCATTCCTTCAAA+GGG | - | chr1_4:38015940-38015959 | None:intergenic | 35.0% | |
| GTTACTAAATCAAGAACGGA+TGG | + | chr1_4:38016033-38016052 | Msa0161900:CDS | 35.0% | |
| AGAGATTCTTTGTTCAAAGG+AGG | + | chr1_4:38016071-38016090 | Msa0161900:CDS | 35.0% | |
| GAGATTCTTTGTTCAAAGGA+GGG | + | chr1_4:38016072-38016091 | Msa0161900:CDS | 35.0% | |
| AGATTCTTTGTTCAAAGGAG+GGG | + | chr1_4:38016073-38016092 | Msa0161900:CDS | 35.0% | |
| TCAAGAAAAGTGAAGATAGG+TGG | + | chr1_4:38016184-38016203 | Msa0161900:CDS | 35.0% | |
| ACCGTCTTCGAAGAAGATTA+TGG | + | chr1_4:38015507-38015526 | Msa0161900:five_prime_UTR | 40.0% | |
| ! | TGGTCTGAGACATTATAACC+AGG | + | chr1_4:38015536-38015555 | Msa0161900:five_prime_UTR | 40.0% |
| GAAGATGTGGTTAATTCACC+TGG | - | chr1_4:38015557-38015576 | None:intergenic | 40.0% | |
| ATCATCTGAGCCAATCATGT+TGG | - | chr1_4:38015857-38015876 | None:intergenic | 40.0% | |
| ! | ATTCCTTCAAAGGGCTCTAA+GGG | - | chr1_4:38015931-38015950 | None:intergenic | 40.0% |
| CGTAAACTCCATTCCTTCAA+AGG | - | chr1_4:38015941-38015960 | None:intergenic | 40.0% | |
| AGAACGGATGGTAGAGTAAT+TGG | + | chr1_4:38016045-38016064 | Msa0161900:CDS | 40.0% | |
| ACCGTCTTCGAAGAAGATTA+TGG | + | chr1_4:38015507-38015526 | Msa0161900:five_prime_UTR | 40.0% | |
| ! | TGGTCTGAGACATTATAACC+AGG | + | chr1_4:38015536-38015555 | Msa0161900:five_prime_UTR | 40.0% |
| GAAGATGTGGTTAATTCACC+TGG | - | chr1_4:38015557-38015576 | None:intergenic | 40.0% | |
| ATCATCTGAGCCAATCATGT+TGG | - | chr1_4:38015857-38015876 | None:intergenic | 40.0% | |
| ! | ATTCCTTCAAAGGGCTCTAA+GGG | - | chr1_4:38015931-38015950 | None:intergenic | 40.0% |
| CGTAAACTCCATTCCTTCAA+AGG | - | chr1_4:38015941-38015960 | None:intergenic | 40.0% | |
| AGAACGGATGGTAGAGTAAT+TGG | + | chr1_4:38016045-38016064 | Msa0161900:CDS | 40.0% | |
| !! | TTCCTTCAAAGGGCTCTAAG+GGG | - | chr1_4:38015930-38015949 | None:intergenic | 45.0% |
| CATTCCTTCAAAGGGCTCTA+AGG | - | chr1_4:38015932-38015951 | None:intergenic | 45.0% | |
| ! | CTTAGAGCCCTTTGAAGGAA+TGG | + | chr1_4:38015930-38015949 | Msa0161900:CDS | 45.0% |
| AATACTACACAAGGTACGCG+AGG | + | chr1_4:38015980-38015999 | Msa0161900:CDS | 45.0% | |
| ACAAGGTACGCGAGGAATAA+AGG | + | chr1_4:38015988-38016007 | Msa0161900:CDS | 45.0% | |
| GTACATGGTCAAACAAGGGT+AGG | + | chr1_4:38016141-38016160 | Msa0161900:CDS | 45.0% | |
| TCAAACAAGGGTAGGATGCA+AGG | + | chr1_4:38016149-38016168 | Msa0161900:CDS | 45.0% | |
| ACTGTTTGTGTTGAAGCTGC+AGG | + | chr1_4:38016207-38016226 | Msa0161900:CDS | 45.0% | |
| !! | TTCCTTCAAAGGGCTCTAAG+GGG | - | chr1_4:38015930-38015949 | None:intergenic | 45.0% |
| CATTCCTTCAAAGGGCTCTA+AGG | - | chr1_4:38015932-38015951 | None:intergenic | 45.0% | |
| ! | CTTAGAGCCCTTTGAAGGAA+TGG | + | chr1_4:38015930-38015949 | Msa0161900:CDS | 45.0% |
| AATACTACACAAGGTACGCG+AGG | + | chr1_4:38015980-38015999 | Msa0161900:CDS | 45.0% | |
| ACAAGGTACGCGAGGAATAA+AGG | + | chr1_4:38015988-38016007 | Msa0161900:CDS | 45.0% | |
| GTACATGGTCAAACAAGGGT+AGG | + | chr1_4:38016141-38016160 | Msa0161900:CDS | 45.0% | |
| TCAAACAAGGGTAGGATGCA+AGG | + | chr1_4:38016149-38016168 | Msa0161900:CDS | 45.0% | |
| ACTGTTTGTGTTGAAGCTGC+AGG | + | chr1_4:38016207-38016226 | Msa0161900:CDS | 45.0% | |
| AGACGGTTCTCAGGTCGTAA+CGG | - | chr1_4:38015494-38015513 | None:intergenic | 50.0% | |
| CTTCTTCGAAGACGGTTCTC+AGG | - | chr1_4:38015503-38015522 | None:intergenic | 50.0% | |
| TTTGTGTTGAAGCTGCAGGC+AGG | + | chr1_4:38016211-38016230 | Msa0161900:CDS | 50.0% | |
| AGACGGTTCTCAGGTCGTAA+CGG | - | chr1_4:38015494-38015513 | None:intergenic | 50.0% | |
| CTTCTTCGAAGACGGTTCTC+AGG | - | chr1_4:38015503-38015522 | None:intergenic | 50.0% | |
| TTTGTGTTGAAGCTGCAGGC+AGG | + | chr1_4:38016211-38016230 | Msa0161900:CDS | 50.0% | |
| CTCCCCTTAGAGCCCTTTGA+AGG | + | chr1_4:38015925-38015944 | Msa0161900:CDS | 55.0% | |
| CTCCCCTTAGAGCCCTTTGA+AGG | + | chr1_4:38015925-38015944 | Msa0161900:CDS | 55.0% | |
| CGGTTCTCAGGTCGTAACGG+CGG | - | chr1_4:38015491-38015510 | None:intergenic | 60.0% | |
| !! | GGCTCTAAGGGGAGCTCCAA+TGG | - | chr1_4:38015919-38015938 | None:intergenic | 60.0% |
| CGGTTCTCAGGTCGTAACGG+CGG | - | chr1_4:38015491-38015510 | None:intergenic | 60.0% | |
| !! | GGCTCTAAGGGGAGCTCCAA+TGG | - | chr1_4:38015919-38015938 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_4 | gene | 38015347 | 38016248 | 38015347 | ID=Msa0161900;Name=Msa0161900 |
| chr1_4 | mRNA | 38015347 | 38016248 | 38015347 | ID=Msa0161900-mRNA-1;Parent=Msa0161900;Name=Msa0161900-mRNA-1;_AED=0.11;_eAED=0.13;_QI=235|1|0.5|1|0|0.5|2|0|143 |
| chr1_4 | exon | 38015347 | 38015557 | 38015347 | ID=Msa0161900-mRNA-1:exon:11144;Parent=Msa0161900-mRNA-1 |
| chr1_4 | exon | 38015793 | 38016248 | 38015793 | ID=Msa0161900-mRNA-1:exon:11145;Parent=Msa0161900-mRNA-1 |
| chr1_4 | five_prime_UTR | 38015347 | 38015557 | 38015347 | ID=Msa0161900-mRNA-1:five_prime_utr;Parent=Msa0161900-mRNA-1 |
| chr1_4 | five_prime_UTR | 38015793 | 38015816 | 38015793 | ID=Msa0161900-mRNA-1:five_prime_utr;Parent=Msa0161900-mRNA-1 |
| chr1_4 | CDS | 38015817 | 38016248 | 38015817 | ID=Msa0161900-mRNA-1:cds;Parent=Msa0161900-mRNA-1 |
| Gene Sequence |
| Protein sequence |
