AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0078170


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0078170 MtrunA17_Chr1g0188361 96.447 394 9 2 1 393 1 390 0.0 767
Msa0078170 MtrunA17_Chr5g0423381 34.967 306 168 9 84 383 50 330 8.70e-53 179
Msa0078170 MtrunA17_Chr8g0372991 35.694 353 185 12 58 393 38 365 1.78e-51 176
Msa0078170 MtrunA17_Chr4g0018641 31.190 311 172 12 87 390 398 673 3.45e-25 107
Msa0078170 MtrunA17_Chr3g0090521 24.507 355 200 13 82 393 121 450 6.34e-22 97.4
Msa0078170 MtrunA17_Chr4g0003831 25.256 293 175 10 122 393 373 642 5.86e-16 79.7
Msa0078170 MtrunA17_Chr2g0332311 24.573 293 179 9 121 393 376 646 1.12e-12 69.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0078170 AT5G38520.1 68.263 334 96 3 62 393 34 359 1.62e-159 453
Msa0078170 AT5G38520.2 67.059 340 102 3 62 393 34 371 4.96e-159 452
Msa0078170 AT5G19850.1 33.631 336 184 10 59 383 42 349 2.89e-54 183
Msa0078170 AT4G36530.2 32.011 378 199 17 30 391 28 363 1.83e-46 163
Msa0078170 AT4G36530.1 33.236 343 177 14 64 391 1 306 2.12e-46 162
Msa0078170 AT5G13800.2 26.615 387 204 16 51 393 64 414 1.12e-21 97.1
Msa0078170 AT5G13800.1 26.615 387 204 16 51 393 64 414 1.12e-21 97.1
Msa0078170 AT5G13800.3 26.615 387 204 16 51 393 87 437 1.59e-21 96.7
Msa0078170 AT5G13800.4 26.667 375 195 16 51 381 64 402 1.66e-20 92.8
Msa0078170 AT4G25290.1 26.738 374 202 13 47 393 342 670 3.78e-20 93.2
Msa0078170 AT4G12830.1 36.441 118 65 3 110 224 125 235 4.43e-14 73.6
Msa0078170 AT1G80280.1 24.742 291 179 10 121 393 374 642 7.20e-14 73.6

Find 103 sgRNAs with CRISPR-Local

Find 251 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCTTCTTGATACAACGTATT+TGG 0.096787 1_2:+55523621 None:intergenic
GCTATTGATCTTCTTGGTTT+TGG 0.163333 1_2:-55525195 Msa0078170:CDS
TAAAGAAACAAAATAATTTA+TGG 0.207219 1_2:+55526980 None:intergenic
GTTTATGCTATTGATCTTCT+TGG 0.221335 1_2:-55525201 Msa0078170:CDS
ACAGTTGATCTTGGATTTCT+TGG 0.227874 1_2:-55524864 Msa0078170:intron
CACCAATTACAAACTATAAA+AGG 0.236377 1_2:+55523819 None:intergenic
TGTTTCTACCACCATTGTTT+TGG 0.239122 1_2:+55527126 None:intergenic
TGTCTCATTGCTGCTGCTTC+AGG 0.241897 1_2:-55524785 Msa0078170:CDS
TCTCCCCATAAAAGTAAAAT+AGG 0.274171 1_2:+55524050 None:intergenic
GCATTTGTATCAATTGTAAC+AGG 0.286676 1_2:-55524119 Msa0078170:CDS
CTGTTACTTGTCCATGGCTT+TGG 0.291905 1_2:-55526918 Msa0078170:CDS
CTTCTTGATACAACGTATTT+GGG 0.312055 1_2:+55523622 None:intergenic
AAGGTTACGTTCAGAGTTCT+TGG 0.313499 1_2:-55523691 Msa0078170:three_prime_UTR
AATTGATACAAATGCATCTA+AGG 0.330008 1_2:+55524127 None:intergenic
TTGCAGAAGCAATTCCCTTT+TGG 0.333173 1_2:+55524531 None:intergenic
GAGTTCAGTGTATGGAAATA+AGG 0.338288 1_2:-55524389 Msa0078170:CDS
ATTTACACCACCATGTCTAT+TGG 0.339060 1_2:-55523722 Msa0078170:three_prime_UTR
ACAAAGCAATTGTTGATGAT+TGG 0.341853 1_2:-55524604 Msa0078170:CDS
TCAATACAAACAGTTGATCT+TGG 0.347401 1_2:-55524873 Msa0078170:intron
AGTTACTCCTTCCCTTGCTT+TGG 0.349148 1_2:-55524574 Msa0078170:CDS
AAGTAACAGAGGAGGGTTAT+TGG 0.354968 1_2:+55526932 None:intergenic
GATCCCTTTACTCCAATTGA+TGG 0.363586 1_2:-55524023 Msa0078170:CDS
TCAAGTGAAACTCTAGTTAG+AGG 0.364835 1_2:-55524662 Msa0078170:CDS
TAATGATCCTGAAGTTTCTA+TGG 0.365035 1_2:+55527061 None:intergenic
CAGAAGCCAACAGTACTAAT+AGG 0.371016 1_2:-55524830 Msa0078170:CDS
GACACTGTCTGAGAATTATA+CGG 0.378882 1_2:-55525223 Msa0078170:CDS
GGCACCAGTTGCACCGGATT+AGG 0.382985 1_2:+55524086 None:intergenic
ACTAGAGTTTCACTTGAATC+TGG 0.383055 1_2:+55524668 None:intergenic
TTTGGTTCCTCAGATCATTA+GGG 0.394374 1_2:-55524171 Msa0078170:intron
GGCAACTCTTTAAAATTCAT+AGG 0.394815 1_2:-55523868 Msa0078170:exon
CAAGTGCTGTTCACTCAGTT+GGG 0.401476 1_2:-55527268 Msa0078170:CDS
ATTGTGCTATTAAATTGTTC+TGG 0.404463 1_2:-55524638 Msa0078170:CDS
ACTGCTTCCATAGAAACTTC+AGG 0.405986 1_2:-55527068 Msa0078170:CDS
GGTCCATCAATTGGAGTAAA+GGG 0.415428 1_2:+55524020 None:intergenic
GTTCAACTGTTCATGCTTGA+AGG 0.416044 1_2:-55523954 Msa0078170:CDS
CAATGAAGAAGAGTGTTCTT+TGG 0.417111 1_2:+55527176 None:intergenic
AGGGCCGCCGGGGCCTAATC+CGG 0.428980 1_2:-55524099 Msa0078170:CDS
TCCTCAGATCATTAGGGAAC+CGG 0.429301 1_2:-55524165 Msa0078170:intron
TTTCCAACAGGTCCATCAAT+TGG 0.431388 1_2:+55524011 None:intergenic
GGGGCCTAATCCGGTGCAAC+TGG 0.436807 1_2:-55524090 Msa0078170:CDS
TTAAATGCAGAGAGAATTTG+AGG 0.438567 1_2:-55524420 Msa0078170:intron
GAAAGGTTCAACAGCATCAA+TGG 0.438799 1_2:-55527230 Msa0078170:CDS
ACAAGTGCTGTTCACTCAGT+TGG 0.441439 1_2:-55527269 Msa0078170:CDS
GAAGAAAAGTACTTTCCAAC+AGG 0.449114 1_2:+55523999 None:intergenic
ACAGACATCGTAGAAAGAAA+TGG 0.455043 1_2:-55527297 Msa0078170:exon
TTGGTGCTTCCATTCCTCAC+TGG 0.462114 1_2:-55526899 Msa0078170:CDS
TAAAGCAGAAATGTCTTAAG+TGG 0.464903 1_2:-55527022 Msa0078170:CDS
CCTCCTCTGTTACTTGTCCA+TGG 0.474310 1_2:-55526924 Msa0078170:CDS
AGGTTACGTTCAGAGTTCTT+GGG 0.478184 1_2:-55523690 Msa0078170:three_prime_UTR
AAGAGTGTTCTTTGGTGTAG+TGG 0.482090 1_2:+55527184 None:intergenic
AGGTCCATCAATTGGAGTAA+AGG 0.483632 1_2:+55524019 None:intergenic
GACATTGTCCCCATGATGAC+AGG 0.489475 1_2:-55523926 Msa0078170:CDS
TCAATTGTAACAGGGCCGCC+GGG 0.490938 1_2:-55524110 Msa0078170:CDS
ACTCCAATTGATGGACCTGT+TGG 0.491390 1_2:-55524014 Msa0078170:CDS
TTCAACTGTTCATGCTTGAA+GGG 0.491418 1_2:-55523953 Msa0078170:CDS
GAGTTTCCTATTAGTACTGT+TGG 0.496781 1_2:+55524824 None:intergenic
ATCAATTGTAACAGGGCCGC+CGG 0.498322 1_2:-55524111 Msa0078170:CDS
GTACTAATAGGAAACTCTGT+TGG 0.499809 1_2:-55524818 Msa0078170:CDS
CTAATTCAGGCCTGTCATCA+TGG 0.500280 1_2:+55523916 None:intergenic
TTTCGTATACCATGGAAACA+TGG 0.503219 1_2:-55525149 Msa0078170:CDS
CTGTTCATGCTTGAAGGGGT+TGG 0.503540 1_2:-55523948 Msa0078170:CDS
ATGTCTATTGGAAGGAAGAA+AGG 0.507439 1_2:-55523710 Msa0078170:three_prime_UTR
AACATCTTGAGTTCAGTGTA+TGG 0.513396 1_2:-55524397 Msa0078170:CDS
TAATTCAGGCCTGTCATCAT+GGG 0.516079 1_2:+55523917 None:intergenic
GGTTTCTCAAACAACTTGAA+AGG 0.517413 1_2:-55527247 Msa0078170:CDS
AGAAATGTCTTAAGTGGAAG+TGG 0.522801 1_2:-55527016 Msa0078170:CDS
AAAATCAATCAGCCAAAGCA+AGG 0.543664 1_2:+55524562 None:intergenic
GGAGCATCAGATAAGCCACC+AGG 0.544264 1_2:-55525174 Msa0078170:CDS
TACCTCAGCCCATGTTTCCA+TGG 0.544343 1_2:+55525140 None:intergenic
CTTCCATTCCTCACTGGCGT+AGG 0.567976 1_2:-55526893 Msa0078170:intron
AAGGCTCCTTCAGCATTCGC+CGG 0.569196 1_2:+55524146 None:intergenic
CTTCCTTCCAATAGACATGG+TGG 0.571251 1_2:+55523715 None:intergenic
GAATGGAAGCACCAAAGCCA+TGG 0.571641 1_2:+55526907 None:intergenic
AGGGAACCGGCGAATGCTGA+AGG 0.582575 1_2:-55524152 Msa0078170:CDS
TCAGAGTTCTTGGGAAAACA+TGG 0.583064 1_2:-55523681 Msa0078170:three_prime_UTR
TACCATGGAAACATGGGCTG+AGG 0.583191 1_2:-55525142 Msa0078170:intron
GTATGGAAATAAGGAGGCTG+TGG 0.584738 1_2:-55524380 Msa0078170:CDS
ATACCTACGCCAGTGAGGAA+TGG 0.584882 1_2:+55526890 None:intergenic
ACACCACCATGTCTATTGGA+AGG 0.595153 1_2:-55523718 Msa0078170:three_prime_UTR
AAATCAATCAGCCAAAGCAA+GGG 0.595342 1_2:+55524563 None:intergenic
TGTCTTAAGTGGAAGTGGAA+AGG 0.597275 1_2:-55527011 Msa0078170:CDS
TTCGTATACCATGGAAACAT+GGG 0.598366 1_2:-55525148 Msa0078170:CDS
ATCAACATAATCTATACATG+TGG 0.601133 1_2:+55523763 None:intergenic
GTGCTATTAAATTGTTCTGG+TGG 0.607382 1_2:-55524635 Msa0078170:CDS
AGTTGCACCGGATTAGGCCC+CGG 0.614113 1_2:+55524092 None:intergenic
TTTCTTCCTTCCAATAGACA+TGG 0.618190 1_2:+55523712 None:intergenic
CAATCAGCCAAAGCAAGGGA+AGG 0.620564 1_2:+55524567 None:intergenic
CATTTGTATCAATTGTAACA+GGG 0.626940 1_2:-55524118 Msa0078170:CDS
GGCTGTGGATGATGAACTCG+TGG 0.631002 1_2:-55524365 Msa0078170:CDS
CATGGACAAGTAACAGAGGA+GGG 0.632484 1_2:+55526925 None:intergenic
CACTTAAGCATCCAAAACAA+TGG 0.634989 1_2:-55527137 Msa0078170:CDS
TCCATGGTATACGAAAAGCC+TGG 0.647873 1_2:+55525156 None:intergenic
TTCAGTGTATGGAAATAAGG+AGG 0.648155 1_2:-55524386 Msa0078170:CDS
CCATGGACAAGTAACAGAGG+AGG 0.649384 1_2:+55526924 None:intergenic
CAATTGTAACAGGGCCGCCG+GGG 0.653302 1_2:-55524109 Msa0078170:CDS
TCAACTGTTCATGCTTGAAG+GGG 0.658262 1_2:-55523952 Msa0078170:CDS
TTAAGCATCCAAAACAATGG+TGG 0.671828 1_2:-55527134 Msa0078170:CDS
AATTCAGGCCTGTCATCATG+GGG 0.687756 1_2:+55523918 None:intergenic
ATGGTATACGAAAAGCCTGG+TGG 0.725251 1_2:+55525159 None:intergenic
AAGCCATGGACAAGTAACAG+AGG 0.730393 1_2:+55526921 None:intergenic
CAAACATACCTACGCCAGTG+AGG 0.731840 1_2:+55526885 None:intergenic
TGTGGATGATGAACTCGTGG+AGG 0.755163 1_2:-55524362 Msa0078170:intron
TGCACCGGATTAGGCCCCGG+CGG 0.755765 1_2:+55524095 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAAGAAACAAAATAATTTA+TGG + chr1_2:55523921-55523940 None:intergenic 10.0%
!!! TTCTTTTACATTTAATTTAT+AGG + chr1_2:55527302-55527321 None:intergenic 10.0%
!!! TTGGTTTTTAAAAAAAAAGA+GGG - chr1_2:55524664-55524683 Msa0078170:CDS 15.0%
!!! CATAACAAATTTAACTTATA+CGG - chr1_2:55525994-55526013 Msa0078170:intron 15.0%
!!! ACTTATAAGAATTCATATTT+TGG - chr1_2:55526709-55526728 Msa0078170:intron 15.0%
!!! ATACATTATTTCTGAATACA+TGG + chr1_2:55524262-55524281 None:intergenic 20.0%
!!! CTCTTTTTTTTTAAAAACCA+AGG + chr1_2:55524665-55524684 None:intergenic 20.0%
!!! CTTGGTTTTTAAAAAAAAAG+AGG - chr1_2:55524663-55524682 Msa0078170:CDS 20.0%
!!! ATAAAATTGTGACATTTTAG+AGG + chr1_2:55525569-55525588 None:intergenic 20.0%
!!! TCAACTATTTTTCTCAAAAT+TGG - chr1_2:55525613-55525632 Msa0078170:intron 20.0%
!!! CAACTATTTTTCTCAAAATT+GGG - chr1_2:55525614-55525633 Msa0078170:intron 20.0%
!!! TCTCTAAAATAGTTATATTG+CGG + chr1_2:55525857-55525876 None:intergenic 20.0%
!!! TGATTTTTTATTGAACCAAA+AGG - chr1_2:55526352-55526371 Msa0078170:intron 20.0%
!!! GATTTTTTATTGAACCAAAA+GGG - chr1_2:55526353-55526372 Msa0078170:intron 20.0%
!! CAAAAAATTTAGGGAAATTA+TGG + chr1_2:55526434-55526453 None:intergenic 20.0%
!!! ATTTCCCTAAATTTTTTGAT+AGG - chr1_2:55526436-55526455 Msa0078170:intron 20.0%
!! GTTTCCTATCAAAAAATTTA+GGG + chr1_2:55526443-55526462 None:intergenic 20.0%
!! TGTTTCCTATCAAAAAATTT+AGG + chr1_2:55526444-55526463 None:intergenic 20.0%
!! AAAAAAATTAATACTCCTTC+CGG + chr1_2:55526672-55526691 None:intergenic 20.0%
!!! AAAATAGGCAATGATATTTT+TGG + chr1_2:55526836-55526855 None:intergenic 20.0%
!!! ATTGCCTATTTTACTTTTAT+GGG - chr1_2:55526844-55526863 Msa0078170:intron 20.0%
!!! AACCTTTTATAGTTTGTAAT+TGG - chr1_2:55527077-55527096 Msa0078170:CDS 20.0%
! AAAATATGAGTTATTGACAG+TGG + chr1_2:55524039-55524058 None:intergenic 25.0%
!! CTTTTAGCAAAAAAAATGAG+TGG + chr1_2:55524078-55524097 None:intergenic 25.0%
! AGAATATAAAGTGACAAACA+AGG + chr1_2:55524111-55524130 None:intergenic 25.0%
! AATTGTAAAAGAAACTGATG+AGG - chr1_2:55524351-55524370 Msa0078170:intron 25.0%
! TTTCACGTAAAATGAAATAG+CGG + chr1_2:55524630-55524649 None:intergenic 25.0%
! GAGAGAAAATGAAGTTATTA+GGG + chr1_2:55524712-55524731 None:intergenic 25.0%
! AGAGAGAAAATGAAGTTATT+AGG + chr1_2:55524713-55524732 None:intergenic 25.0%
! CCACAAAAACAACAAAAATA+AGG + chr1_2:55525034-55525053 None:intergenic 25.0%
!!! CCTTATTTTTGTTGTTTTTG+TGG - chr1_2:55525031-55525050 Msa0078170:intron 25.0%
! TCCTAAAAGTTATGAAATAG+CGG - chr1_2:55525336-55525355 Msa0078170:intron 25.0%
! GATAACATAGTAGTTAATAG+CGG + chr1_2:55525423-55525442 None:intergenic 25.0%
! TAACTACTATGTTATCAACA+AGG - chr1_2:55525427-55525446 Msa0078170:intron 25.0%
!! ACTCTATTTCTCAATCATAA+AGG + chr1_2:55525473-55525492 None:intergenic 25.0%
! TTTAATGATGTCGAACTAAA+AGG + chr1_2:55525796-55525815 None:intergenic 25.0%
!! ATTGTGCTATTAAATTGTTC+TGG - chr1_2:55526260-55526279 Msa0078170:intron 25.0%
! AAAGGTAATCTCTTTAGATT+AGG - chr1_2:55526408-55526427 Msa0078170:intron 25.0%
!! ATTTTTGTCTACAAAACCAA+CGG + chr1_2:55526611-55526630 None:intergenic 25.0%
! AATTGATACAAATGCATCTA+AGG + chr1_2:55526774-55526793 None:intergenic 25.0%
! CATTTGTATCAATTGTAACA+GGG - chr1_2:55526780-55526799 Msa0078170:intron 25.0%
!!! CATTGCCTATTTTACTTTTA+TGG - chr1_2:55526843-55526862 Msa0078170:intron 25.0%
!!! TTGCCTATTTTACTTTTATG+GGG - chr1_2:55526845-55526864 Msa0078170:intron 25.0%
!!! AATTTTTCATGGACTAATTC+AGG + chr1_2:55526998-55527017 None:intergenic 25.0%
! CACCAATTACAAACTATAAA+AGG + chr1_2:55527082-55527101 None:intergenic 25.0%
! ATCAACATAATCTATACATG+TGG + chr1_2:55527138-55527157 None:intergenic 25.0%
TAATGATCCTGAAGTTTCTA+TGG + chr1_2:55523840-55523859 None:intergenic 30.0%
TAAAGCAGAAATGTCTTAAG+TGG - chr1_2:55523876-55523895 Msa0078170:exon 30.0%
AGTATAATTAACTTCCGCTT+AGG + chr1_2:55524201-55524220 None:intergenic 30.0%
AAGCGGAAGTTAATTATACT+AGG - chr1_2:55524201-55524220 Msa0078170:intron 30.0%
!! ACTACTCTGGTTGATAATAT+TGG + chr1_2:55524465-55524484 None:intergenic 30.0%
TGAAAATACAAGATTCTCCT+TGG - chr1_2:55524645-55524664 Msa0078170:CDS 30.0%
! CTTCCTTCTTTCATTCTTTT+CGG - chr1_2:55524731-55524750 Msa0078170:intron 30.0%
!! TTTTGAGAGAAATGCGTTTT+GGG + chr1_2:55524775-55524794 None:intergenic 30.0%
!! TTTTTGAGAGAAATGCGTTT+TGG + chr1_2:55524776-55524795 None:intergenic 30.0%
AACGCATTTCTCTCAAAAAA+CGG - chr1_2:55524777-55524796 Msa0078170:intron 30.0%
TGTTTATGAACAAAACAGAG+AGG + chr1_2:55524909-55524928 None:intergenic 30.0%
TTTATGAACAAGCAGAATAG+AGG + chr1_2:55524960-55524979 None:intergenic 30.0%
TTGCTTGGCAATTTAATCAT+TGG - chr1_2:55525156-55525175 Msa0078170:CDS 30.0%
!! ACCGCTATTTCATAACTTTT+AGG + chr1_2:55525340-55525359 None:intergenic 30.0%
!!! AGGCTGTTATTTTAACTACA+TGG - chr1_2:55525447-55525466 Msa0078170:intron 30.0%
!!! TCAACCTTGTTTTAACTACA+TGG + chr1_2:55525531-55525550 None:intergenic 30.0%
! TTCTCAAAATTGGGTTGTAA+AGG - chr1_2:55525623-55525642 Msa0078170:intron 30.0%
GTTTATGCTATTGATCTTCT+TGG - chr1_2:55525697-55525716 Msa0078170:intron 30.0%
CTTGATATTTAGGCAAAATG+TGG + chr1_2:55525912-55525931 None:intergenic 30.0%
! CACATTTTGCCTAAATATCA+AGG - chr1_2:55525910-55525929 Msa0078170:intron 30.0%
TGATGCAAACCTTGATATTT+AGG + chr1_2:55525922-55525941 None:intergenic 30.0%
TCAATACAAACAGTTGATCT+TGG - chr1_2:55526025-55526044 Msa0078170:intron 30.0%
!! ACAAAGCAATTGTTGATGAT+TGG - chr1_2:55526294-55526313 Msa0078170:intron 30.0%
!! TTTTTGAGCGTGTTAAACAA+AGG - chr1_2:55526390-55526409 Msa0078170:intron 30.0%
TTAAATGCAGAGAGAATTTG+AGG - chr1_2:55526478-55526497 Msa0078170:intron 30.0%
TACAAAACCAACGGTTAAAA+AGG + chr1_2:55526602-55526621 None:intergenic 30.0%
!!! TTGTCGTTTTCAAAGTTCAA+TGG - chr1_2:55526641-55526660 Msa0078170:intron 30.0%
GCATTTGTATCAATTGTAAC+AGG - chr1_2:55526779-55526798 Msa0078170:intron 30.0%
TCTCCCCATAAAAGTAAAAT+AGG + chr1_2:55526851-55526870 None:intergenic 30.0%
! TGAACATTTTCTTGTTGAGA+AGG + chr1_2:55526929-55526948 None:intergenic 30.0%
!! GGCAACTCTTTAAAATTCAT+AGG - chr1_2:55527030-55527049 Msa0078170:CDS 30.0%
! ATATGTGACAGTTTTTCATG+AGG + chr1_2:55527112-55527131 None:intergenic 30.0%
CTTCTTGATACAACGTATTT+GGG + chr1_2:55527279-55527298 None:intergenic 30.0%
ACAGACATCGTAGAAAGAAA+TGG - chr1_2:55523601-55523620 Msa0078170:three_prime_UTR 35.0%
GGTTTCTCAAACAACTTGAA+AGG - chr1_2:55523651-55523670 Msa0078170:three_prime_UTR 35.0%
!! CAATGAAGAAGAGTGTTCTT+TGG + chr1_2:55523725-55523744 None:intergenic 35.0%
! TTTTGGATGCTTAAGTGGTT+TGG + chr1_2:55523758-55523777 None:intergenic 35.0%
!!! CATTGTTTTGGATGCTTAAG+TGG + chr1_2:55523763-55523782 None:intergenic 35.0%
CACTTAAGCATCCAAAACAA+TGG - chr1_2:55523761-55523780 Msa0078170:three_prime_UTR 35.0%
TTAAGCATCCAAAACAATGG+TGG - chr1_2:55523764-55523783 Msa0078170:three_prime_UTR 35.0%
!! TGTTTCTACCACCATTGTTT+TGG + chr1_2:55523775-55523794 None:intergenic 35.0%
AGAAATGTCTTAAGTGGAAG+TGG - chr1_2:55523882-55523901 Msa0078170:CDS 35.0%
AAATGAGTGGATGAGAATTG+TGG + chr1_2:55524065-55524084 None:intergenic 35.0%
GAAATGAATTAGTGCCTAAG+TGG - chr1_2:55524223-55524242 Msa0078170:intron 35.0%
TCAACCAGAGTAGTTAATAG+CGG - chr1_2:55524471-55524490 Msa0078170:intron 35.0%
! TTTGAGAGAAATGCGTTTTG+GGG + chr1_2:55524774-55524793 None:intergenic 35.0%
GAAGTTACAAACCTAAGGAA+CGG + chr1_2:55524853-55524872 None:intergenic 35.0%
GTCAAGAAGTTACAAACCTA+AGG + chr1_2:55524858-55524877 None:intergenic 35.0%
ATAGAGGATGAACAAAACAG+AGG + chr1_2:55524944-55524963 None:intergenic 35.0%
ATAGAGGATGAACAAAACAG+AGG + chr1_2:55524944-55524963 None:intergenic 35.0%
! TTTTGTGGACAAAACAGTCA+TGG - chr1_2:55525046-55525065 Msa0078170:intron 35.0%
CATGTGCTCAAAGACATAAA+CGG - chr1_2:55525114-55525133 Msa0078170:intron 35.0%
TTCTGTGATAAGTTCAGCAA+TGG - chr1_2:55525215-55525234 Msa0078170:CDS 35.0%
AAGACACCAATTGGGAATTA+TGG - chr1_2:55525256-55525275 Msa0078170:intron 35.0%
AGACACCAATTGGGAATTAT+GGG - chr1_2:55525257-55525276 Msa0078170:intron 35.0%
! TATCCCGCTATAGCATTTTT+GGG - chr1_2:55525375-55525394 Msa0078170:intron 35.0%
!! TAGTAGTTAATAGCGGATAG+CGG + chr1_2:55525416-55525435 None:intergenic 35.0%
ACGTACATGATTGAGAAGAA+AGG + chr1_2:55525508-55525527 None:intergenic 35.0%
ACGTCCATGTAGTTAAAACA+AGG - chr1_2:55525524-55525543 Msa0078170:intron 35.0%
!! TTGTGACATTTTAGAGGCAT+CGG + chr1_2:55525563-55525582 None:intergenic 35.0%
GACACTGTCTGAGAATTATA+CGG - chr1_2:55525675-55525694 Msa0078170:intron 35.0%
! GCTATTGATCTTCTTGGTTT+TGG - chr1_2:55525703-55525722 Msa0078170:intron 35.0%
TTTCGTATACCATGGAAACA+TGG - chr1_2:55525749-55525768 Msa0078170:intron 35.0%
TTCGTATACCATGGAAACAT+GGG - chr1_2:55525750-55525769 Msa0078170:intron 35.0%
TTGTAGTTTGGACTGCAAAT+TGG + chr1_2:55525828-55525847 None:intergenic 35.0%
CTGCATTGTAACTGTAATTG+CGG - chr1_2:55525886-55525905 Msa0078170:intron 35.0%
ACAGTTGATCTTGGATTTCT+TGG - chr1_2:55526034-55526053 Msa0078170:intron 35.0%
GAGTTTCCTATTAGTACTGT+TGG + chr1_2:55526077-55526096 None:intergenic 35.0%
GTACTAATAGGAAACTCTGT+TGG - chr1_2:55526080-55526099 Msa0078170:intron 35.0%
ACTAGAGTTTCACTTGAATC+TGG + chr1_2:55526233-55526252 None:intergenic 35.0%
TCAAGTGAAACTCTAGTTAG+AGG - chr1_2:55526236-55526255 Msa0078170:intron 35.0%
! GTGCTATTAAATTGTTCTGG+TGG - chr1_2:55526263-55526282 Msa0078170:intron 35.0%
AAATCAATCAGCCAAAGCAA+GGG + chr1_2:55526338-55526357 None:intergenic 35.0%
AAAATCAATCAGCCAAAGCA+AGG + chr1_2:55526339-55526358 None:intergenic 35.0%
AACATCTTGAGTTCAGTGTA+TGG - chr1_2:55526501-55526520 Msa0078170:intron 35.0%
GAGTTCAGTGTATGGAAATA+AGG - chr1_2:55526509-55526528 Msa0078170:intron 35.0%
TTCAGTGTATGGAAATAAGG+AGG - chr1_2:55526512-55526531 Msa0078170:intron 35.0%
TCAAAGTTCAATGGAATCAC+CGG - chr1_2:55526650-55526669 Msa0078170:intron 35.0%
!!! TTTTGGTTCCTCAGATCATT+AGG - chr1_2:55526726-55526745 Msa0078170:intron 35.0%
! TTTGGTTCCTCAGATCATTA+GGG - chr1_2:55526727-55526746 Msa0078170:intron 35.0%
!! GAAGAAAAGTACTTTCCAAC+AGG + chr1_2:55526902-55526921 None:intergenic 35.0%
TTCAACTGTTCATGCTTGAA+GGG - chr1_2:55526945-55526964 Msa0078170:CDS 35.0%
TCCATGAAAAATTGCTTCCA+TGG - chr1_2:55527005-55527024 Msa0078170:CDS 35.0%
! ACCATGGAAGCAATTTTTCA+TGG + chr1_2:55527009-55527028 None:intergenic 35.0%
TGAAAAATTGCTTCCATGGT+TGG - chr1_2:55527009-55527028 Msa0078170:CDS 35.0%
!! TTTTAAAGAGTTGCCAACCA+TGG + chr1_2:55527025-55527044 None:intergenic 35.0%
ATTTACACCACCATGTCTAT+TGG - chr1_2:55527176-55527195 Msa0078170:CDS 35.0%
TTTCTTCCTTCCAATAGACA+TGG + chr1_2:55527189-55527208 None:intergenic 35.0%
ATGTCTATTGGAAGGAAGAA+AGG - chr1_2:55527188-55527207 Msa0078170:CDS 35.0%
GCTTCTTGATACAACGTATT+TGG + chr1_2:55527280-55527299 None:intergenic 35.0%
GAAAGGTTCAACAGCATCAA+TGG - chr1_2:55523668-55523687 Msa0078170:three_prime_UTR 40.0%
! GGTTTTTGTGGATAGGAACA+AGG + chr1_2:55523696-55523715 None:intergenic 40.0%
! GTGTAGTGGTTTTTGTGGAT+AGG + chr1_2:55523703-55523722 None:intergenic 40.0%
!! CTTTGGTGTAGTGGTTTTTG+TGG + chr1_2:55523708-55523727 None:intergenic 40.0%
!! AAGAGTGTTCTTTGGTGTAG+TGG + chr1_2:55523717-55523736 None:intergenic 40.0%
ACTGCTTCCATAGAAACTTC+AGG - chr1_2:55523830-55523849 Msa0078170:three_prime_UTR 40.0%
TGTCTTAAGTGGAAGTGGAA+AGG - chr1_2:55523887-55523906 Msa0078170:CDS 40.0%
AAGTAACAGAGGAGGGTTAT+TGG + chr1_2:55523969-55523988 None:intergenic 40.0%
!! TGTGCATTTTAGTGCCTAAG+CGG - chr1_2:55524184-55524203 Msa0078170:intron 40.0%
!!! TTTTGGGGTGAGAAGATGAA+AGG + chr1_2:55524759-55524778 None:intergenic 40.0%
TATAGAAGAGAGCAAACACG+AGG + chr1_2:55524880-55524899 None:intergenic 40.0%
AGCAATGTCGAGATTATCAC+CGG + chr1_2:55525141-55525160 None:intergenic 40.0%
GTGATAATCTCGACATTGCT+TGG - chr1_2:55525141-55525160 Msa0078170:intron 40.0%
TAGAGCAAGAAGACACCAAT+TGG - chr1_2:55525247-55525266 Msa0078170:intron 40.0%
AGAGCAAGAAGACACCAATT+GGG - chr1_2:55525248-55525267 Msa0078170:intron 40.0%
CATCACCCATAATTCCCAAT+TGG + chr1_2:55525265-55525284 None:intergenic 40.0%
! CTATCCCGCTATAGCATTTT+TGG - chr1_2:55525374-55525393 Msa0078170:intron 40.0%
! ATCCCGCTATAGCATTTTTG+GGG - chr1_2:55525376-55525395 Msa0078170:intron 40.0%
GGCATCATCATTTATCTGAC+AGG - chr1_2:55525644-55525663 Msa0078170:intron 40.0%
ACAGTTCTTAATCGCAGTTG+CGG + chr1_2:55525960-55525979 None:intergenic 40.0%
CAGAAGCCAACAGTACTAAT+AGG - chr1_2:55526068-55526087 Msa0078170:intron 40.0%
! TTGCAGAAGCAATTCCCTTT+TGG + chr1_2:55526370-55526389 None:intergenic 40.0%
GAACTCGTGGAGGTAAATTA+AGG - chr1_2:55526546-55526565 Msa0078170:intron 40.0%
! CTTCGTTCCTTTTTAACCGT+TGG - chr1_2:55526592-55526611 Msa0078170:intron 40.0%
GATCCCTTTACTCCAATTGA+TGG - chr1_2:55526875-55526894 Msa0078170:intron 40.0%
GGTCCATCAATTGGAGTAAA+GGG + chr1_2:55526881-55526900 None:intergenic 40.0%
AGGTCCATCAATTGGAGTAA+AGG + chr1_2:55526882-55526901 None:intergenic 40.0%
TTTCCAACAGGTCCATCAAT+TGG + chr1_2:55526890-55526909 None:intergenic 40.0%
GTTCAACTGTTCATGCTTGA+AGG - chr1_2:55526944-55526963 Msa0078170:CDS 40.0%
TCAACTGTTCATGCTTGAAG+GGG - chr1_2:55526946-55526965 Msa0078170:CDS 40.0%
TAATTCAGGCCTGTCATCAT+GGG + chr1_2:55526984-55527003 None:intergenic 40.0%
AAGGTTACGTTCAGAGTTCT+TGG - chr1_2:55527207-55527226 Msa0078170:CDS 40.0%
AGGTTACGTTCAGAGTTCTT+GGG - chr1_2:55527208-55527227 Msa0078170:CDS 40.0%
TCAGAGTTCTTGGGAAAACA+TGG - chr1_2:55527217-55527236 Msa0078170:CDS 40.0%
! ACAAGTGCTGTTCACTCAGT+TGG - chr1_2:55523629-55523648 Msa0078170:three_prime_UTR 45.0%
! CAAGTGCTGTTCACTCAGTT+GGG - chr1_2:55523630-55523649 Msa0078170:three_prime_UTR 45.0%
CATGGACAAGTAACAGAGGA+GGG + chr1_2:55523976-55523995 None:intergenic 45.0%
AAGCCATGGACAAGTAACAG+AGG + chr1_2:55523980-55523999 None:intergenic 45.0%
! CTGTTACTTGTCCATGGCTT+TGG - chr1_2:55523980-55523999 Msa0078170:CDS 45.0%
GACGTGATTATGCACCACTT+AGG + chr1_2:55524240-55524259 None:intergenic 45.0%
AGTTAATAGCGGCGCTATAG+CGG - chr1_2:55524482-55524501 Msa0078170:intron 45.0%
TATCTCATAACGCTACGCCA+TGG + chr1_2:55524558-55524577 None:intergenic 45.0%
AAAACCGCTATGCAGTGTTG+CGG + chr1_2:55524596-55524615 None:intergenic 45.0%
GCGCCGAAAAGAATGAAAGA+AGG + chr1_2:55524737-55524756 None:intergenic 45.0%
GTTACAAACCTAAGGAACGG+CGG + chr1_2:55524850-55524869 None:intergenic 45.0%
GGAAACAGAGAGCAGAATAG+AGG + chr1_2:55525013-55525032 None:intergenic 45.0%
GCTCAAAGACATAAACGGAC+CGG - chr1_2:55525119-55525138 Msa0078170:intron 45.0%
GACCCCAAAAATGCTATAGC+GGG + chr1_2:55525381-55525400 None:intergenic 45.0%
CGACCCCAAAAATGCTATAG+CGG + chr1_2:55525382-55525401 None:intergenic 45.0%
!!! CGCTATAGCATTTTTGGGGT+CGG - chr1_2:55525380-55525399 Msa0078170:intron 45.0%
ATGGTATACGAAAAGCCTGG+TGG + chr1_2:55525742-55525761 None:intergenic 45.0%
! ACCAGGCTTTTCGTATACCA+TGG - chr1_2:55525741-55525760 Msa0078170:intron 45.0%
TCCATGGTATACGAAAAGCC+TGG + chr1_2:55525745-55525764 None:intergenic 45.0%
! TGGGCTGAGGTATTTGTCTA+AGG - chr1_2:55525769-55525788 Msa0078170:intron 45.0%
TTGCGGCTGCAATTGTAGTT+TGG + chr1_2:55525840-55525859 None:intergenic 45.0%
AGTTACTCCTTCCCTTGCTT+TGG - chr1_2:55526324-55526343 Msa0078170:intron 45.0%
GTATGGAAATAAGGAGGCTG+TGG - chr1_2:55526518-55526537 Msa0078170:intron 45.0%
AGTTCAATGGAATCACCGGA+AGG - chr1_2:55526654-55526673 Msa0078170:intron 45.0%
TCCTCAGATCATTAGGGAAC+CGG - chr1_2:55526733-55526752 Msa0078170:intron 45.0%
!!! ATTTTTGGCACCAGTTGCAC+CGG + chr1_2:55526821-55526840 None:intergenic 45.0%
! ACTCCAATTGATGGACCTGT+TGG - chr1_2:55526884-55526903 Msa0078170:intron 45.0%
AATTCAGGCCTGTCATCATG+GGG + chr1_2:55526983-55527002 None:intergenic 45.0%
CTAATTCAGGCCTGTCATCA+TGG + chr1_2:55526985-55527004 None:intergenic 45.0%
ACACCACCATGTCTATTGGA+AGG - chr1_2:55527180-55527199 Msa0078170:CDS 45.0%
CTTCCTTCCAATAGACATGG+TGG + chr1_2:55527186-55527205 None:intergenic 45.0%
CCATGGACAAGTAACAGAGG+AGG + chr1_2:55523977-55523996 None:intergenic 50.0%
! CCTCCTCTGTTACTTGTCCA+TGG - chr1_2:55523974-55523993 Msa0078170:CDS 50.0%
!! GAATGGAAGCACCAAAGCCA+TGG + chr1_2:55523994-55524013 None:intergenic 50.0%
! TTGGTGCTTCCATTCCTCAC+TGG - chr1_2:55523999-55524018 Msa0078170:CDS 50.0%
ATACCTACGCCAGTGAGGAA+TGG + chr1_2:55524011-55524030 None:intergenic 50.0%
CAAACATACCTACGCCAGTG+AGG + chr1_2:55524016-55524035 None:intergenic 50.0%
AGCGCCGCTATTAACTACTC+TGG + chr1_2:55524478-55524497 None:intergenic 50.0%
TGGCTTATTGCATAGCGGTC+CGG + chr1_2:55524538-55524557 None:intergenic 50.0%
GACCGCTATGCAATAAGCCA+TGG - chr1_2:55524538-55524557 Msa0078170:CDS 50.0%
CGCCATGGCTTATTGCATAG+CGG + chr1_2:55524543-55524562 None:intergenic 50.0%
GGCGTAGCGTTATGAGATAG+CGG - chr1_2:55524559-55524578 Msa0078170:CDS 50.0%
! ATGAGATAGCGGCGCAATAG+CGG - chr1_2:55524570-55524589 Msa0078170:CDS 50.0%
GTCATGGCAACATCAGCTTC+TGG - chr1_2:55525062-55525081 Msa0078170:intron 50.0%
GAAATAGCGGTCATAGCGCT+AGG - chr1_2:55525349-55525368 Msa0078170:intron 50.0%
! TACCATGGAAACATGGGCTG+AGG - chr1_2:55525756-55525775 Msa0078170:intron 50.0%
TACCTCAGCCCATGTTTCCA+TGG + chr1_2:55525761-55525780 None:intergenic 50.0%
! TGTCTCATTGCTGCTGCTTC+AGG - chr1_2:55526113-55526132 Msa0078170:intron 50.0%
CAATCAGCCAAAGCAAGGGA+AGG + chr1_2:55526334-55526353 None:intergenic 50.0%
TGTGGATGATGAACTCGTGG+AGG - chr1_2:55526536-55526555 Msa0078170:intron 50.0%
ATCAATTGTAACAGGGCCGC+CGG - chr1_2:55526787-55526806 Msa0078170:intron 50.0%
CTGTTCATGCTTGAAGGGGT+TGG - chr1_2:55526950-55526969 Msa0078170:CDS 50.0%
GACATTGTCCCCATGATGAC+AGG - chr1_2:55526972-55526991 Msa0078170:CDS 50.0%
CTTCCATTCCTCACTGGCGT+AGG - chr1_2:55524005-55524024 Msa0078170:CDS 55.0%
ACAAACCTAAGGAACGGCGG+CGG + chr1_2:55524847-55524866 None:intergenic 55.0%
! GGAGCATCAGATAAGCCACC+AGG - chr1_2:55525724-55525743 Msa0078170:intron 55.0%
GGCTGTGGATGATGAACTCG+TGG - chr1_2:55526533-55526552 Msa0078170:intron 55.0%
! GCCGGTTCCCTAATGATCTG+AGG + chr1_2:55526737-55526756 None:intergenic 55.0%
AAGGCTCCTTCAGCATTCGC+CGG + chr1_2:55526755-55526774 None:intergenic 55.0%
TCAATTGTAACAGGGCCGCC+GGG - chr1_2:55526788-55526807 Msa0078170:intron 55.0%
GGCGCTATAGCGGCCAATAG+CGG - chr1_2:55524492-55524511 Msa0078170:intron 60.0%
TAAGGAACGGCGGCGGATGA+CGG + chr1_2:55524840-55524859 None:intergenic 60.0%
AGGGAACCGGCGAATGCTGA+AGG - chr1_2:55526746-55526765 Msa0078170:intron 60.0%
CAATTGTAACAGGGCCGCCG+GGG - chr1_2:55526789-55526808 Msa0078170:intron 60.0%
! AGTTGCACCGGATTAGGCCC+CGG + chr1_2:55526809-55526828 None:intergenic 60.0%
GGCACCAGTTGCACCGGATT+AGG + chr1_2:55526815-55526834 None:intergenic 60.0%
GCGGCCGCAACACTGCATAG+CGG - chr1_2:55524589-55524608 Msa0078170:CDS 65.0%
! GGTGCGACGGCGGCGTTTTA+TGG + chr1_2:55524819-55524838 None:intergenic 65.0%
GTCATCCGCCGCCGTTCCTT+AGG - chr1_2:55524839-55524858 Msa0078170:CDS 65.0%
! TAGCGGATAGCGGCGCGTAG+CGG + chr1_2:55525406-55525425 None:intergenic 65.0%
GGGGCCTAATCCGGTGCAAC+TGG - chr1_2:55526808-55526827 Msa0078170:intron 65.0%
! TGCACCGGATTAGGCCCCGG+CGG + chr1_2:55526806-55526825 None:intergenic 70.0%
AGCGGCCAATAGCGGCCGCG+CGG - chr1_2:55524500-55524519 Msa0078170:intron 75.0%
CCAATAGCGGCCGCGCGGTG+CGG - chr1_2:55524505-55524524 Msa0078170:intron 75.0%
! GGCGGATGACGGTGCGACGG+CGG + chr1_2:55524829-55524848 None:intergenic 75.0%
! GGCGGCGGATGACGGTGCGA+CGG + chr1_2:55524832-55524851 None:intergenic 75.0%
AGGGCCGCCGGGGCCTAATC+CGG - chr1_2:55526799-55526818 Msa0078170:intron 75.0%
! CCGCACCGCGCGGCCGCTAT+TGG + chr1_2:55524508-55524527 None:intergenic 80.0%
! CGGTACCGCACCGCACCGCG+CGG + chr1_2:55524518-55524537 None:intergenic 80.0%
! CGCGCGGTGCGGTGCGGTAC+CGG - chr1_2:55524516-55524535 Msa0078170:CDS 80.0%
! AGCGGCCGCGCGGTGCGGTG+CGG - chr1_2:55524510-55524529 Msa0078170:CDS 85.0%
Chromosome Type Strat End Strand Name
chr1_2 gene 55523594 55527326 55523594 ID=Msa0078170;Name=Msa0078170
chr1_2 mRNA 55523594 55527326 55523594 ID=Msa0078170-mRNA-1;Parent=Msa0078170;Name=Msa0078170-mRNA-1;_AED=0.15;_eAED=0.15;_QI=26|1|1|1|1|1|6|284|393
chr1_2 exon 55523594 55524180 55523594 ID=Msa0078170-mRNA-1:exon:17325;Parent=Msa0078170-mRNA-1
chr1_2 exon 55524363 55524432 55524363 ID=Msa0078170-mRNA-1:exon:17324;Parent=Msa0078170-mRNA-1
chr1_2 exon 55524509 55524697 55524509 ID=Msa0078170-mRNA-1:exon:17323;Parent=Msa0078170-mRNA-1
chr1_2 exon 55524782 55524882 55524782 ID=Msa0078170-mRNA-1:exon:17322;Parent=Msa0078170-mRNA-1
chr1_2 exon 55525143 55525254 55525143 ID=Msa0078170-mRNA-1:exon:17321;Parent=Msa0078170-mRNA-1
chr1_2 exon 55526894 55527326 55526894 ID=Msa0078170-mRNA-1:exon:17320;Parent=Msa0078170-mRNA-1
chr1_2 five_prime_UTR 55527301 55527326 55527301 ID=Msa0078170-mRNA-1:five_prime_utr;Parent=Msa0078170-mRNA-1
chr1_2 CDS 55526894 55527300 55526894 ID=Msa0078170-mRNA-1:cds;Parent=Msa0078170-mRNA-1
chr1_2 CDS 55525143 55525254 55525143 ID=Msa0078170-mRNA-1:cds;Parent=Msa0078170-mRNA-1
chr1_2 CDS 55524782 55524882 55524782 ID=Msa0078170-mRNA-1:cds;Parent=Msa0078170-mRNA-1
chr1_2 CDS 55524509 55524697 55524509 ID=Msa0078170-mRNA-1:cds;Parent=Msa0078170-mRNA-1
chr1_2 CDS 55524363 55524432 55524363 ID=Msa0078170-mRNA-1:cds;Parent=Msa0078170-mRNA-1
chr1_2 CDS 55523878 55524180 55523878 ID=Msa0078170-mRNA-1:cds;Parent=Msa0078170-mRNA-1
chr1_2 three_prime_UTR 55523594 55523877 55523594 ID=Msa0078170-mRNA-1:three_prime_utr;Parent=Msa0078170-mRNA-1
Gene Sequence

>Msa0078170

ATGGAAGTGACAAGTGCTGTTCACTCAGTTGGGTTTCTCAAACAACTTGAAAGGTTCAACAGCATCAATGGATCCTTGTTCCTATCCACAAAAACCACTACACCAAAGAACACTCTTCTTCATTGTTATCTTCATCCAAACCACTTAAGCATCCAAAACAATGGTGGTAGAAACAGTAAAAGTGTGATCATCAACTCAACTTCTTCTTCTACTGCTTCCATAGAAACTTCAGGATCATTATCTGAAGTTGAAAAGATAAAGCAGAAATGTCTTAAGTGGAAGTGGAAAGGTGAATATTCCATAAATTATTTTGTTTCTTTAGACTCATCTTCAGATTCTGCAAAGTCCAATAACCCTCCTCTGTTACTTGTCCATGGCTTTGGTGCTTCCATTCCTCACTGGCGTAGGAATATCAAGACACTGTCTGAGAATTATACGGTTTATGCTATTGATCTTCTTGGTTTTGGAGCATCAGATAAGCCACCAGGCTTTTCGTATACCATGGAAACATGGGCTGAGTTGATCTTGGATTTCTTGGATGAAGTTGTTCAGAAGCCAACAGTACTAATAGGAAACTCTGTTGGAAGTCTTGCTTGTCTCATTGCTGCTGCTTCAGGCATTATTCGACCAGATTCAAGTGAAACTCTAGTTAGAGGAATTGTGCTATTAAATTGTTCTGGTGGCATGAACAACAAAGCAATTGTTGATGATTGGAGAATCAAGTTACTCCTTCCCTTGCTTTGGCTGATTGATTTTTTATTGAACCAAAAGGGAATTGCTTCTGCAATTTTTGAGCGTGTTAAACAAAGAGAGAATTTGAGGAACATCTTGAGTTCAGTGTATGGAAATAAGGAGGCTGTGGATGATGAACTCGTGGAGATCATTAGGGAACCGGCGAATGCTGAAGGAGCCTTAGATGCATTTGTATCAATTGTAACAGGGCCGCCGGGGCCTAATCCGGTGCAACTGGTGCCAAAAATATCATTGCCTATTTTACTTTTATGGGGAGATGAAGATCCCTTTACTCCAATTGATGGACCTGTTGGAAAGTACTTTTCTTCATTGCCTTCTCAACAAGAAAATGTTCAACTGTTCATGCTTGAAGGGGTTGGACATTGTCCCCATGATGACAGGCCTGAATTAGTCCATGAAAAATTGCTTCCATGGTTGGCAACTCTTTAA

Protein sequence

>Msa0078170

MEVTSAVHSVGFLKQLERFNSINGSLFLSTKTTTPKNTLLHCYLHPNHLSIQNNGGRNSKSVIINSTSSSTASIETSGSLSEVEKIKQKCLKWKWKGEYSINYFVSLDSSSDSAKSNNPPLLLVHGFGASIPHWRRNIKTLSENYTVYAIDLLGFGASDKPPGFSYTMETWAELILDFLDEVVQKPTVLIGNSVGSLACLIAAASGIIRPDSSETLVRGIVLLNCSGGMNNKAIVDDWRIKLLLPLLWLIDFLLNQKGIASAIFERVKQRENLRNILSSVYGNKEAVDDELVEIIREPANAEGALDAFVSIVTGPPGPNPVQLVPKISLPILLLWGDEDPFTPIDGPVGKYFSSLPSQQENVQLFMLEGVGHCPHDDRPELVHEKLLPWLATL*