Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1259030 | XP_013457732.1 | 97.596 | 208 | 3 | 1 | 1 | 208 | 1 | 206 | 5.67e-148 | 419 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1259030 | sp|Q9FGS5|NRT31_ARATH | 51.185 | 211 | 90 | 6 | 1 | 204 | 1 | 205 | 1.58e-63 | 199 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0004180 | Msa1259030 | -0.800487 | 1.408436e-48 | -8.615850e-47 |
Msa0034540 | Msa1259030 | 0.835234 | 1.889240e-56 | -8.615850e-47 |
Msa0034590 | Msa1259030 | -0.828848 | 7.155633e-55 | -8.615850e-47 |
Msa0037040 | Msa1259030 | -0.811583 | 6.511925e-51 | -8.615850e-47 |
Msa0047630 | Msa1259030 | -0.820566 | 6.410105e-53 | -8.615850e-47 |
Msa0078110 | Msa1259030 | -0.823674 | 1.220061e-53 | -8.615850e-47 |
Msa0107830 | Msa1259030 | 0.822505 | 2.285636e-53 | -8.615850e-47 |
Msa0117650 | Msa1259030 | 0.817726 | 2.839473e-52 | -8.615850e-47 |
Msa0603310 | Msa1259030 | 0.801724 | 7.866867e-49 | -8.615850e-47 |
Msa0606340 | Msa1259030 | -0.804633 | 1.967024e-49 | -8.615850e-47 |
Msa0619030 | Msa1259030 | -0.801803 | 7.578221e-49 | -8.615850e-47 |
Msa0637590 | Msa1259030 | 0.813747 | 2.188606e-51 | -8.615850e-47 |
Msa0644340 | Msa1259030 | 0.807534 | 4.824033e-50 | -8.615850e-47 |
Msa0648840 | Msa1259030 | -0.820436 | 6.865535e-53 | -8.615850e-47 |
Msa0657260 | Msa1259030 | 0.820993 | 5.112353e-53 | -8.615850e-47 |
Msa0666950 | Msa1259030 | 0.801962 | 7.028747e-49 | -8.615850e-47 |
Msa0669350 | Msa1259030 | 0.806263 | 8.955946e-50 | -8.615850e-47 |
Msa0670170 | Msa1259030 | 0.808293 | 3.325192e-50 | -8.615850e-47 |
Msa0675590 | Msa1259030 | 0.808710 | 2.709969e-50 | -8.615850e-47 |
Msa0693050 | Msa1259030 | -0.810678 | 1.022709e-50 | -8.615850e-47 |
Msa0695250 | Msa1259030 | -0.804808 | 1.808255e-49 | -8.615850e-47 |
Msa0701490 | Msa1259030 | 0.825758 | 3.936568e-54 | -8.615850e-47 |
Msa0701560 | Msa1259030 | 0.825366 | 4.874514e-54 | -8.615850e-47 |
Msa0716620 | Msa1259030 | 0.805154 | 1.530520e-49 | -8.615850e-47 |
Msa0729740 | Msa1259030 | -0.800618 | 1.324530e-48 | -8.615850e-47 |
Msa0731580 | Msa1259030 | 0.804843 | 1.778527e-49 | -8.615850e-47 |
Msa0736560 | Msa1259030 | 0.804073 | 2.573751e-49 | -8.615850e-47 |
Msa0744550 | Msa1259030 | 0.837352 | 5.467896e-57 | -8.615850e-47 |
Msa0744560 | Msa1259030 | 0.833362 | 5.570557e-56 | -8.615850e-47 |
Msa0744710 | Msa1259030 | 0.813208 | 2.875864e-51 | -8.615850e-47 |
Msa0746340 | Msa1259030 | 0.827696 | 1.356386e-54 | -8.615850e-47 |
Msa0771810 | Msa1259030 | 0.807943 | 3.947780e-50 | -8.615850e-47 |
Msa0772350 | Msa1259030 | 0.813147 | 2.965395e-51 | -8.615850e-47 |
Msa0788490 | Msa1259030 | -0.818670 | 1.736558e-52 | -8.615850e-47 |
Msa0792490 | Msa1259030 | -0.800173 | 1.631579e-48 | -8.615850e-47 |
Msa0793270 | Msa1259030 | 0.802636 | 5.107608e-49 | -8.615850e-47 |
Msa0795320 | Msa1259030 | 0.817183 | 3.763138e-52 | -8.615850e-47 |
Msa0809920 | Msa1259030 | 0.820078 | 8.293879e-53 | -8.615850e-47 |
Msa0812050 | Msa1259030 | 0.809029 | 2.314974e-50 | -8.615850e-47 |
Msa0816390 | Msa1259030 | -0.818961 | 1.491650e-52 | -8.615850e-47 |
Msa0826240 | Msa1259030 | 0.814500 | 1.493083e-51 | -8.615850e-47 |
Msa0826360 | Msa1259030 | 0.830846 | 2.333202e-55 | -8.615850e-47 |
Msa0826370 | Msa1259030 | 0.804646 | 1.955115e-49 | -8.615850e-47 |
Msa0833980 | Msa1259030 | -0.805862 | 1.087386e-49 | -8.615850e-47 |
Msa0129290 | Msa1259030 | 0.817325 | 3.497276e-52 | -8.615850e-47 |
Msa0129770 | Msa1259030 | 0.822502 | 2.288713e-53 | -8.615850e-47 |
Msa0129820 | Msa1259030 | -0.812737 | 3.647599e-51 | -8.615850e-47 |
Msa0143640 | Msa1259030 | 0.820197 | 7.790758e-53 | -8.615850e-47 |
Msa0143830 | Msa1259030 | 0.807224 | 5.611841e-50 | -8.615850e-47 |
Msa0164350 | Msa1259030 | 0.834402 | 3.060560e-56 | -8.615850e-47 |
Msa0167160 | Msa1259030 | -0.800390 | 1.474069e-48 | -8.615850e-47 |
Msa0185040 | Msa1259030 | 0.800365 | 1.491713e-48 | -8.615850e-47 |
Msa0193950 | Msa1259030 | 0.802166 | 6.382948e-49 | -8.615850e-47 |
Msa1239190 | Msa1259030 | 0.818789 | 1.631496e-52 | -8.615850e-47 |
Msa1245890 | Msa1259030 | 0.999790 | 0.000000e+00 | -8.615850e-47 |
Msa1254870 | Msa1259030 | 0.814537 | 1.465072e-51 | -8.615850e-47 |
Msa1259030 | Msa1263500 | 0.809515 | 1.821399e-50 | -8.615850e-47 |
Msa1259030 | Msa1264940 | 0.805188 | 1.506036e-49 | -8.615850e-47 |
Msa1259030 | Msa1299480 | 0.834594 | 2.738862e-56 | -8.615850e-47 |
Msa1259030 | Msa1303150 | 0.801283 | 9.686940e-49 | -8.615850e-47 |
Msa1259030 | Msa1328430 | 0.815674 | 8.191436e-52 | -8.615850e-47 |
Msa1259030 | Msa1334000 | 0.811303 | 7.489046e-51 | -8.615850e-47 |
Msa1259030 | Msa1350130 | -0.800571 | 1.353827e-48 | -8.615850e-47 |
Msa1259030 | Msa1377050 | 0.803302 | 3.719988e-49 | -8.615850e-47 |
Msa1259030 | Msa1387610 | 0.816541 | 5.244640e-52 | -8.615850e-47 |
Msa1259030 | Msa1390200 | 0.826844 | 2.170939e-54 | -8.615850e-47 |
Msa1259030 | Msa1395200 | -0.807739 | 4.363814e-50 | -8.615850e-47 |
Msa1259030 | Msa1395250 | 0.819097 | 1.389005e-52 | -8.615850e-47 |
Msa1259030 | Msa1407040 | 0.804420 | 2.178915e-49 | -8.615850e-47 |
Msa1259030 | Msa1415510 | -0.800632 | 1.315941e-48 | -8.615850e-47 |
Msa1259030 | Msa1419200 | 0.993000 | 8.458559e-197 | -8.615850e-47 |
Msa1259030 | Msa1419210 | 0.816650 | 4.958335e-52 | -8.615850e-47 |
Msa1259030 | Msa1438160 | 0.818589 | 1.811486e-52 | -8.615850e-47 |
Msa1259030 | Msa1449470 | 0.825123 | 5.565401e-54 | -8.615850e-47 |
Msa1259030 | Msa1459920 | 0.831517 | 1.595748e-55 | -8.615850e-47 |
Msa1259030 | Msa1459930 | 0.837913 | 3.925415e-57 | -8.615850e-47 |
Msa0370360 | Msa1259030 | 0.843096 | 1.729108e-58 | -8.615850e-47 |
Msa0390200 | Msa1259030 | 0.817978 | 2.490435e-52 | -8.615850e-47 |
Msa0419150 | Msa1259030 | -0.802311 | 5.959521e-49 | -8.615850e-47 |
Msa0421080 | Msa1259030 | 0.821345 | 4.242618e-53 | -8.615850e-47 |
Msa0429840 | Msa1259030 | 0.815492 | 8.994173e-52 | -8.615850e-47 |
Msa0433090 | Msa1259030 | 0.804177 | 2.448361e-49 | -8.615850e-47 |
Msa0433890 | Msa1259030 | -0.806720 | 7.172535e-50 | -8.615850e-47 |
Msa0434460 | Msa1259030 | 0.802355 | 5.836209e-49 | -8.615850e-47 |
Msa0464980 | Msa1259030 | -0.801755 | 7.751605e-49 | -8.615850e-47 |
Msa0480540 | Msa1259030 | 0.839141 | 1.892132e-57 | -8.615850e-47 |
Msa0480550 | Msa1259030 | 0.835051 | 2.101232e-56 | -8.615850e-47 |
Msa1026890 | Msa1259030 | 0.802336 | 5.888769e-49 | -8.615850e-47 |
Msa1030210 | Msa1259030 | 0.837772 | 4.268347e-57 | -8.615850e-47 |
Msa1061840 | Msa1259030 | 0.821237 | 4.492270e-53 | -8.615850e-47 |
Msa1064240 | Msa1259030 | 0.815512 | 8.899541e-52 | -8.615850e-47 |
Msa1069250 | Msa1259030 | 0.821128 | 4.759009e-53 | -8.615850e-47 |
Msa1085820 | Msa1259030 | 0.808489 | 3.020047e-50 | -8.615850e-47 |
Msa1102210 | Msa1259030 | 0.810934 | 9.003926e-51 | -8.615850e-47 |
Msa0267900 | Msa1259030 | 0.810748 | 9.880344e-51 | -8.615850e-47 |
Msa0271700 | Msa1259030 | 0.827185 | 1.798590e-54 | -8.615850e-47 |
Msa0271720 | Msa1259030 | 0.820689 | 6.005592e-53 | -8.615850e-47 |
Msa0314240 | Msa1259030 | 0.803326 | 3.677781e-49 | -8.615850e-47 |
Msa0324810 | Msa1259030 | 0.803508 | 3.370687e-49 | -8.615850e-47 |
Msa1107510 | Msa1259030 | 0.803946 | 2.734029e-49 | -8.615850e-47 |
Msa1110900 | Msa1259030 | 0.816371 | 5.724252e-52 | -8.615850e-47 |
Msa1120580 | Msa1259030 | 0.809811 | 1.572994e-50 | -8.615850e-47 |
Msa1131120 | Msa1259030 | 0.804986 | 1.659556e-49 | -8.615850e-47 |
Msa1137750 | Msa1259030 | 0.818801 | 1.621625e-52 | -8.615850e-47 |
Msa1151070 | Msa1259030 | 0.806332 | 8.659252e-50 | -8.615850e-47 |
Msa1154240 | Msa1259030 | 0.820632 | 6.190774e-53 | -8.615850e-47 |
Msa1185270 | Msa1259030 | 0.802743 | 4.854594e-49 | -8.615850e-47 |
Msa1202110 | Msa1259030 | 0.814061 | 1.865861e-51 | -8.615850e-47 |
Msa1208840 | Msa1259030 | 0.949420 | 1.319147e-107 | -8.615850e-47 |
Msa1208920 | Msa1259030 | 0.922474 | 9.385237e-89 | -8.615850e-47 |
Msa1211610 | Msa1259030 | 0.837972 | 3.791316e-57 | -8.615850e-47 |
Msa1211930 | Msa1259030 | -0.801759 | 7.737776e-49 | -8.615850e-47 |
Msa1223560 | Msa1259030 | 0.824659 | 7.159023e-54 | -8.615850e-47 |
Msa1224510 | Msa1259030 | 0.824164 | 9.363429e-54 | -8.615850e-47 |
Msa0500910 | Msa1259030 | 0.815652 | 8.284847e-52 | -8.615850e-47 |
Msa0523980 | Msa1259030 | 0.804330 | 2.275585e-49 | -8.615850e-47 |
Msa0534610 | Msa1259030 | 0.806547 | 7.800187e-50 | -8.615850e-47 |
Msa0550980 | Msa1259030 | -0.803163 | 3.973915e-49 | -8.615850e-47 |
Msa0557440 | Msa1259030 | -0.800949 | 1.133579e-48 | -8.615850e-47 |
Msa0565120 | Msa1259030 | 0.850485 | 1.647404e-60 | -8.615850e-47 |
Msa0580840 | Msa1259030 | 0.817969 | 2.503218e-52 | -8.615850e-47 |
Msa0590810 | Msa1259030 | 0.804481 | 2.115819e-49 | -8.615850e-47 |
Msa0594250 | Msa1259030 | 0.807414 | 5.112963e-50 | -8.615850e-47 |
Msa0597370 | Msa1259030 | -0.811937 | 5.453770e-51 | -8.615850e-47 |
Msa0597820 | Msa1259030 | 0.806287 | 8.851332e-50 | -8.615850e-47 |
Msa0848020 | Msa1259030 | 0.823988 | 1.029887e-53 | -8.615850e-47 |
Msa0850480 | Msa1259030 | 0.813511 | 2.466693e-51 | -8.615850e-47 |
Msa0856080 | Msa1259030 | 0.803133 | 4.031594e-49 | -8.615850e-47 |
Msa0859040 | Msa1259030 | 0.801689 | 7.996659e-49 | -8.615850e-47 |
Msa0865810 | Msa1259030 | 0.800986 | 1.114265e-48 | -8.615850e-47 |
Msa0865820 | Msa1259030 | 0.819807 | 9.565430e-53 | -8.615850e-47 |
Msa0865830 | Msa1259030 | 0.829331 | 5.464454e-55 | -8.615850e-47 |
Msa0874750 | Msa1259030 | 0.811264 | 7.637153e-51 | -8.615850e-47 |
Msa0879940 | Msa1259030 | -0.820401 | 6.992779e-53 | -8.615850e-47 |
Msa0925940 | Msa1259030 | 0.801618 | 8.271224e-49 | -8.615850e-47 |
Msa0945160 | Msa1259030 | -0.800401 | 1.466254e-48 | -8.615850e-47 |
Msa0966580 | Msa1259030 | 0.816402 | 5.632763e-52 | -8.615850e-47 |
Msa0976400 | Msa1259030 | 0.804859 | 1.764256e-49 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1259030 | MtrunA17_Chr4g0058311 | 97.596 | 208 | 3 | 1 | 1 | 208 | 1 | 206 | 5.22e-152 | 419 |
Msa1259030 | MtrunA17_Chr4g0058331 | 97.115 | 208 | 4 | 1 | 1 | 208 | 1 | 206 | 7.41e-152 | 419 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1259030 | AT5G50200.1 | 51.185 | 211 | 90 | 6 | 1 | 204 | 1 | 205 | 1.60e-64 | 199 |
Msa1259030 | AT5G50200.3 | 51.185 | 211 | 90 | 6 | 1 | 204 | 1 | 205 | 1.60e-64 | 199 |
Msa1259030 | AT5G50200.2 | 51.185 | 211 | 90 | 6 | 1 | 204 | 1 | 205 | 1.60e-64 | 199 |
Msa1259030 | AT4G24715.1 | 50.239 | 209 | 94 | 6 | 1 | 204 | 23 | 226 | 2.80e-63 | 196 |
Find 64 sgRNAs with CRISPR-Local
Find 201 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GTAGCACAACTTCAGCTTTA+TGG | 0.134503 | 8_2:+60434834 | None:intergenic |
AAAATTTATGTCATAGAAAT+AGG | 0.214599 | 8_2:-60434214 | Msa1259030:three_prime_UTR |
ATCTACGCAGTTCTGTTATC+TGG | 0.302271 | 8_2:-60434928 | Msa1259030:intron |
CTATAGCTCCTATGACTATA+TGG | 0.312141 | 8_2:-60434284 | Msa1259030:three_prime_UTR |
ACTTACCTTGTCCCTGCTTA+GGG | 0.312527 | 8_2:+60435481 | None:intergenic |
TTATGCCTTATATATGTTGT+AGG | 0.313435 | 8_2:-60434370 | Msa1259030:three_prime_UTR |
AGAGAAAAGCCAATTGGAAT+TGG | 0.326415 | 8_2:+60435657 | None:intergenic |
TACTTACCTTGTCCCTGCTT+AGG | 0.355450 | 8_2:+60435480 | None:intergenic |
TGTTTAGCTGAACTTTGTTA+TGG | 0.379387 | 8_2:-60435552 | Msa1259030:CDS |
ACTGAATTCAATTACTGCTT+TGG | 0.387524 | 8_2:+60434433 | None:intergenic |
CCAGGCCTACAACATATATA+AGG | 0.400830 | 8_2:+60434365 | None:intergenic |
AACGATAAGGAAGTGGCTTA+TGG | 0.411170 | 8_2:-60434619 | Msa1259030:CDS |
TAGGGGAAGCTGTGACTTCA+AGG | 0.413086 | 8_2:+60435499 | None:intergenic |
TGCATTTGATTCCAACGATA+AGG | 0.421816 | 8_2:-60434632 | Msa1259030:CDS |
AATATCATTCCAATTCCAAT+TGG | 0.435193 | 8_2:-60435666 | Msa1259030:five_prime_UTR |
CAGTGACATAGGAAACTTCA+TGG | 0.450404 | 8_2:-60434414 | Msa1259030:three_prime_UTR |
AGTGAAAACCATATAGTCAT+AGG | 0.457048 | 8_2:+60434276 | None:intergenic |
GCTTTCTCAGTTGTGTCCCT+AGG | 0.459425 | 8_2:-60434493 | Msa1259030:CDS |
AGTCACAGCTTCCCCTAAGC+AGG | 0.463378 | 8_2:-60435493 | Msa1259030:CDS |
CCTTATATATGTTGTAGGCC+TGG | 0.464256 | 8_2:-60434365 | Msa1259030:three_prime_UTR |
GGTACTCTTACCCGCGTTCG+TGG | 0.464298 | 8_2:+60434591 | None:intergenic |
GACTTCAGAGAAAAGCCAAT+TGG | 0.464343 | 8_2:+60435651 | None:intergenic |
AAAGAAAAGTCAACTGTGAA+AGG | 0.477653 | 8_2:+60435623 | None:intergenic |
AGCTGAACTTTGTTATGGAA+AGG | 0.496120 | 8_2:-60435547 | Msa1259030:CDS |
ATAAGCCACTTCCTTATCGT+TGG | 0.499427 | 8_2:+60434621 | None:intergenic |
GTAATTGAATTCAGTGACAT+AGG | 0.512101 | 8_2:-60434425 | Msa1259030:exon |
AGACCGAGGATGAACTCTCT+AGG | 0.513840 | 8_2:-60434777 | Msa1259030:CDS |
TATGATGAGTCTGTTCCAGC+TGG | 0.517572 | 8_2:+60434862 | None:intergenic |
ATGTCATAGAAATAGGAGTC+AGG | 0.520060 | 8_2:-60434207 | Msa1259030:three_prime_UTR |
TGATTCCAACGATAAGGAAG+TGG | 0.521314 | 8_2:-60434626 | Msa1259030:CDS |
CTAAACAAGACCTTCCCAGC+TGG | 0.523958 | 8_2:-60434877 | Msa1259030:CDS |
GTTGGAAGCATTGTAGGGCA+TGG | 0.526614 | 8_2:+60434726 | None:intergenic |
AAGAAAAGTCAACTGTGAAA+GGG | 0.535727 | 8_2:+60435624 | None:intergenic |
TGAGTCTGTTCCAGCTGGGA+AGG | 0.539300 | 8_2:+60434867 | None:intergenic |
TGCGTTGATCTCAAACAAGT+TGG | 0.539862 | 8_2:+60434564 | None:intergenic |
CTACAATGCTTCCAACAAAA+CGG | 0.541838 | 8_2:-60434719 | Msa1259030:CDS |
GTCCCTAGAGAGTTCATCCT+CGG | 0.558273 | 8_2:+60434774 | None:intergenic |
TAGACAAAATCAGTGGAACA+TGG | 0.559795 | 8_2:-60434903 | Msa1259030:CDS |
GACCGAGGATGAACTCTCTA+GGG | 0.561011 | 8_2:-60434776 | Msa1259030:CDS |
AGGGGAAGCTGTGACTTCAA+GGG | 0.577454 | 8_2:+60435500 | None:intergenic |
CTTACCTTGTCCCTGCTTAG+GGG | 0.578473 | 8_2:+60435482 | None:intergenic |
GATCTCAAACAAGTTGGTAG+TGG | 0.584307 | 8_2:+60434570 | None:intergenic |
ACTGATAATATTATTTAACC+AGG | 0.587057 | 8_2:+60434347 | None:intergenic |
CAATATAGAAGAACACACCT+AGG | 0.601286 | 8_2:+60434476 | None:intergenic |
TTTGAGATCAACGCAATCAG+TGG | 0.604199 | 8_2:-60434556 | Msa1259030:CDS |
AGACAAAATCAGTGGAACAT+GGG | 0.618150 | 8_2:-60434902 | Msa1259030:CDS |
ATCGTTGGAATCAAATGCAT+AGG | 0.623735 | 8_2:+60434636 | None:intergenic |
GTCACAGCTTCCCCTAAGCA+GGG | 0.629784 | 8_2:-60435492 | Msa1259030:CDS |
TATGGCCAAACCACGAACGC+GGG | 0.634750 | 8_2:-60434601 | Msa1259030:CDS |
TTATGGCCAAACCACGAACG+CGG | 0.634987 | 8_2:-60434602 | Msa1259030:CDS |
GCTTCCCCTAAGCAGGGACA+AGG | 0.636634 | 8_2:-60435486 | Msa1259030:intron |
GCGCTGAATCAACCACTCGA+AGG | 0.649799 | 8_2:+60434690 | None:intergenic |
CCTCGGTCTTTCTCCAAGCG+CGG | 0.651070 | 8_2:+60434791 | None:intergenic |
AATATAGAAGAACACACCTA+GGG | 0.653049 | 8_2:+60434477 | None:intergenic |
TATGGCAGCACACAAGCTTG+TGG | 0.654698 | 8_2:-60435595 | Msa1259030:CDS |
TCTGGAGTAGACAAAATCAG+TGG | 0.660740 | 8_2:-60434910 | Msa1259030:CDS |
TGAGAAAGCACTGAAGACAA+CGG | 0.661115 | 8_2:+60434507 | None:intergenic |
AAACGGTTCAAACCTTCGAG+TGG | 0.663100 | 8_2:-60434702 | Msa1259030:CDS |
CGTACAAAGTACGTTGCCTG+AGG | 0.678441 | 8_2:+60434661 | None:intergenic |
AGCAGATATCAAGAGTCGCG+TGG | 0.681698 | 8_2:+60434530 | None:intergenic |
ATGATGAGTCTGTTCCAGCT+GGG | 0.682275 | 8_2:+60434863 | None:intergenic |
AGATATCAAGAGTCGCGTGG+CGG | 0.700580 | 8_2:+60434533 | None:intergenic |
CCGCGCTTGGAGAAAGACCG+AGG | 0.703551 | 8_2:-60434791 | Msa1259030:CDS |
AAAGCTGAAGTTGTGCTACG+CGG | 0.733243 | 8_2:-60434830 | Msa1259030:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | GATAAGACATTTATTTATTA+AGG | + | chr8_2:60434776-60434795 | None:intergenic | 15.0% |
!! | AAAATTTATGTCATAGAAAT+AGG | - | chr8_2:60435600-60435619 | Msa1259030:exon | 15.0% |
!! | GATAAGACATTTATTTATTA+AGG | + | chr8_2:60434776-60434795 | None:intergenic | 15.0% |
!! | AAAATTTATGTCATAGAAAT+AGG | - | chr8_2:60435600-60435619 | Msa1259030:exon | 15.0% |
!! | TTATTCAAATTCAAGAAAAG+AGG | + | chr8_2:60434570-60434589 | None:intergenic | 20.0% |
!!! | GAACATTTTTCAAGAAAATT+TGG | - | chr8_2:60434606-60434625 | Msa1259030:CDS | 20.0% |
!! | TGTTCTTCTATATTGAAAAA+AGG | - | chr8_2:60435346-60435365 | Msa1259030:intron | 20.0% |
!! | TTCTATATTGAAAAAAGGAA+GGG | - | chr8_2:60435351-60435370 | Msa1259030:intron | 20.0% |
!! | ACTGATAATATTATTTAACC+AGG | + | chr8_2:60435470-60435489 | None:intergenic | 20.0% |
!! | CATGAAATATGAAAAACTTA+GGG | + | chr8_2:60435504-60435523 | None:intergenic | 20.0% |
!!! | ATATTATTCTGAAAAGAATC+TGG | + | chr8_2:60434133-60434152 | None:intergenic | 20.0% |
!! | TTATTCAAATTCAAGAAAAG+AGG | + | chr8_2:60434570-60434589 | None:intergenic | 20.0% |
!!! | GAACATTTTTCAAGAAAATT+TGG | - | chr8_2:60434606-60434625 | Msa1259030:CDS | 20.0% |
!! | TGTTCTTCTATATTGAAAAA+AGG | - | chr8_2:60435346-60435365 | Msa1259030:intron | 20.0% |
!! | TTCTATATTGAAAAAAGGAA+GGG | - | chr8_2:60435351-60435370 | Msa1259030:intron | 20.0% |
!! | ACTGATAATATTATTTAACC+AGG | + | chr8_2:60435470-60435489 | None:intergenic | 20.0% |
!! | CATGAAATATGAAAAACTTA+GGG | + | chr8_2:60435504-60435523 | None:intergenic | 20.0% |
! | AATATCATTCCAATTCCAAT+TGG | - | chr8_2:60434148-60434167 | Msa1259030:three_prime_UTR | 25.0% |
!!! | TTGACTTTTCTTTAGAACTA+TGG | - | chr8_2:60434201-60434220 | Msa1259030:three_prime_UTR | 25.0% |
! | ATAATCACATAAATCAAGGT+TGG | + | chr8_2:60434540-60434559 | None:intergenic | 25.0% |
! | GAACATAATCACATAAATCA+AGG | + | chr8_2:60434544-60434563 | None:intergenic | 25.0% |
! | TTCTTGAAAAATGTTCATAC+TGG | + | chr8_2:60434602-60434621 | None:intergenic | 25.0% |
! | CTTAATAAATAGTAACACAC+CGG | + | chr8_2:60434648-60434667 | None:intergenic | 25.0% |
! | TACATTACAAATGATCACAA+AGG | - | chr8_2:60434700-60434719 | Msa1259030:CDS | 25.0% |
! | CAAGTATGCAATCATAATAT+AGG | + | chr8_2:60434798-60434817 | None:intergenic | 25.0% |
!! | AAGCTGATTAAACTCAATTT+TGG | - | chr8_2:60434855-60434874 | Msa1259030:CDS | 25.0% |
! | CTTCTATATTGAAAAAAGGA+AGG | - | chr8_2:60435350-60435369 | Msa1259030:intron | 25.0% |
! | TTATGCCTTATATATGTTGT+AGG | - | chr8_2:60435444-60435463 | Msa1259030:intron | 25.0% |
! | CCATGAAATATGAAAAACTT+AGG | + | chr8_2:60435505-60435524 | None:intergenic | 25.0% |
!! | CCTAAGTTTTTCATATTTCA+TGG | - | chr8_2:60435502-60435521 | Msa1259030:CDS | 25.0% |
!! | AGTTTTTCATATTTCATGGA+TGG | - | chr8_2:60435506-60435525 | Msa1259030:CDS | 25.0% |
! | AATATCATTCCAATTCCAAT+TGG | - | chr8_2:60434148-60434167 | Msa1259030:three_prime_UTR | 25.0% |
!!! | TTGACTTTTCTTTAGAACTA+TGG | - | chr8_2:60434201-60434220 | Msa1259030:three_prime_UTR | 25.0% |
! | ATAATCACATAAATCAAGGT+TGG | + | chr8_2:60434540-60434559 | None:intergenic | 25.0% |
! | GAACATAATCACATAAATCA+AGG | + | chr8_2:60434544-60434563 | None:intergenic | 25.0% |
! | TTCTTGAAAAATGTTCATAC+TGG | + | chr8_2:60434602-60434621 | None:intergenic | 25.0% |
! | CTTAATAAATAGTAACACAC+CGG | + | chr8_2:60434648-60434667 | None:intergenic | 25.0% |
! | TACATTACAAATGATCACAA+AGG | - | chr8_2:60434700-60434719 | Msa1259030:CDS | 25.0% |
! | CAAGTATGCAATCATAATAT+AGG | + | chr8_2:60434798-60434817 | None:intergenic | 25.0% |
!! | AAGCTGATTAAACTCAATTT+TGG | - | chr8_2:60434855-60434874 | Msa1259030:CDS | 25.0% |
! | CTTCTATATTGAAAAAAGGA+AGG | - | chr8_2:60435350-60435369 | Msa1259030:intron | 25.0% |
! | TTATGCCTTATATATGTTGT+AGG | - | chr8_2:60435444-60435463 | Msa1259030:intron | 25.0% |
! | CCATGAAATATGAAAAACTT+AGG | + | chr8_2:60435505-60435524 | None:intergenic | 25.0% |
!! | CCTAAGTTTTTCATATTTCA+TGG | - | chr8_2:60435502-60435521 | Msa1259030:CDS | 25.0% |
!! | AGTTTTTCATATTTCATGGA+TGG | - | chr8_2:60435506-60435525 | Msa1259030:CDS | 25.0% |
AAGAAAAGTCAACTGTGAAA+GGG | + | chr8_2:60434193-60434212 | None:intergenic | 30.0% | |
AAAGAAAAGTCAACTGTGAA+AGG | + | chr8_2:60434194-60434213 | None:intergenic | 30.0% | |
TGTTTAGCTGAACTTTGTTA+TGG | - | chr8_2:60434262-60434281 | Msa1259030:three_prime_UTR | 30.0% | |
TCAAATTCAAGAAAAGAGGA+AGG | + | chr8_2:60434566-60434585 | None:intergenic | 30.0% | |
!!! | TTTTTCAAGAAAATTTGGCC+AGG | - | chr8_2:60434611-60434630 | Msa1259030:CDS | 30.0% |
! | CGGTGTGTTACTATTTATTA+AGG | - | chr8_2:60434646-60434665 | Msa1259030:CDS | 30.0% |
ATTGAGTTTAATCAGCTTGA+AGG | + | chr8_2:60434853-60434872 | None:intergenic | 30.0% | |
AATATAGAAGAACACACCTA+GGG | + | chr8_2:60435340-60435359 | None:intergenic | 30.0% | |
ACTGAATTCAATTACTGCTT+TGG | + | chr8_2:60435384-60435403 | None:intergenic | 30.0% | |
GTAATTGAATTCAGTGACAT+AGG | - | chr8_2:60435389-60435408 | Msa1259030:intron | 30.0% | |
AGTGAAAACCATATAGTCAT+AGG | + | chr8_2:60435541-60435560 | None:intergenic | 30.0% | |
AAGAAAAGTCAACTGTGAAA+GGG | + | chr8_2:60434193-60434212 | None:intergenic | 30.0% | |
AAAGAAAAGTCAACTGTGAA+AGG | + | chr8_2:60434194-60434213 | None:intergenic | 30.0% | |
TGTTTAGCTGAACTTTGTTA+TGG | - | chr8_2:60434262-60434281 | Msa1259030:three_prime_UTR | 30.0% | |
TCAAATTCAAGAAAAGAGGA+AGG | + | chr8_2:60434566-60434585 | None:intergenic | 30.0% | |
!!! | TTTTTCAAGAAAATTTGGCC+AGG | - | chr8_2:60434611-60434630 | Msa1259030:CDS | 30.0% |
! | CGGTGTGTTACTATTTATTA+AGG | - | chr8_2:60434646-60434665 | Msa1259030:CDS | 30.0% |
ATTGAGTTTAATCAGCTTGA+AGG | + | chr8_2:60434853-60434872 | None:intergenic | 30.0% | |
AATATAGAAGAACACACCTA+GGG | + | chr8_2:60435340-60435359 | None:intergenic | 30.0% | |
ACTGAATTCAATTACTGCTT+TGG | + | chr8_2:60435384-60435403 | None:intergenic | 30.0% | |
GTAATTGAATTCAGTGACAT+AGG | - | chr8_2:60435389-60435408 | Msa1259030:intron | 30.0% | |
AGTGAAAACCATATAGTCAT+AGG | + | chr8_2:60435541-60435560 | None:intergenic | 30.0% | |
AGAGAAAAGCCAATTGGAAT+TGG | + | chr8_2:60434160-60434179 | None:intergenic | 35.0% | |
! | AGCTGAACTTTGTTATGGAA+AGG | - | chr8_2:60434267-60434286 | Msa1259030:three_prime_UTR | 35.0% |
GAAAATTTGGCCAGGTTTAA+TGG | - | chr8_2:60434619-60434638 | Msa1259030:CDS | 35.0% | |
AAAAATTGCAACGCAACTTG+CGG | + | chr8_2:60434680-60434699 | None:intergenic | 35.0% | |
TAGACAAAATCAGTGGAACA+TGG | - | chr8_2:60434911-60434930 | Msa1259030:CDS | 35.0% | |
AGACAAAATCAGTGGAACAT+GGG | - | chr8_2:60434912-60434931 | Msa1259030:CDS | 35.0% | |
!!! | GTTTTGTTGGAAGCATTGTA+GGG | + | chr8_2:60435096-60435115 | None:intergenic | 35.0% |
CTACAATGCTTCCAACAAAA+CGG | - | chr8_2:60435095-60435114 | Msa1259030:intron | 35.0% | |
ATCGTTGGAATCAAATGCAT+AGG | + | chr8_2:60435181-60435200 | None:intergenic | 35.0% | |
TGCATTTGATTCCAACGATA+AGG | - | chr8_2:60435182-60435201 | Msa1259030:intron | 35.0% | |
CAATATAGAAGAACACACCT+AGG | + | chr8_2:60435341-60435360 | None:intergenic | 35.0% | |
CTATAGCTCCTATGACTATA+TGG | - | chr8_2:60435530-60435549 | Msa1259030:CDS | 35.0% | |
! | ACTATATGGTTTTCACTCAC+TGG | - | chr8_2:60435544-60435563 | Msa1259030:CDS | 35.0% |
ATGTCATAGAAATAGGAGTC+AGG | - | chr8_2:60435607-60435626 | Msa1259030:exon | 35.0% | |
AGAGAAAAGCCAATTGGAAT+TGG | + | chr8_2:60434160-60434179 | None:intergenic | 35.0% | |
! | AGCTGAACTTTGTTATGGAA+AGG | - | chr8_2:60434267-60434286 | Msa1259030:three_prime_UTR | 35.0% |
GAAAATTTGGCCAGGTTTAA+TGG | - | chr8_2:60434619-60434638 | Msa1259030:CDS | 35.0% | |
AAAAATTGCAACGCAACTTG+CGG | + | chr8_2:60434680-60434699 | None:intergenic | 35.0% | |
TAGACAAAATCAGTGGAACA+TGG | - | chr8_2:60434911-60434930 | Msa1259030:CDS | 35.0% | |
AGACAAAATCAGTGGAACAT+GGG | - | chr8_2:60434912-60434931 | Msa1259030:CDS | 35.0% | |
!!! | GTTTTGTTGGAAGCATTGTA+GGG | + | chr8_2:60435096-60435115 | None:intergenic | 35.0% |
CTACAATGCTTCCAACAAAA+CGG | - | chr8_2:60435095-60435114 | Msa1259030:intron | 35.0% | |
ATCGTTGGAATCAAATGCAT+AGG | + | chr8_2:60435181-60435200 | None:intergenic | 35.0% | |
TGCATTTGATTCCAACGATA+AGG | - | chr8_2:60435182-60435201 | Msa1259030:intron | 35.0% | |
CAATATAGAAGAACACACCT+AGG | + | chr8_2:60435341-60435360 | None:intergenic | 35.0% | |
CTATAGCTCCTATGACTATA+TGG | - | chr8_2:60435530-60435549 | Msa1259030:CDS | 35.0% | |
! | ACTATATGGTTTTCACTCAC+TGG | - | chr8_2:60435544-60435563 | Msa1259030:CDS | 35.0% |
ATGTCATAGAAATAGGAGTC+AGG | - | chr8_2:60435607-60435626 | Msa1259030:exon | 35.0% | |
GACTTCAGAGAAAAGCCAAT+TGG | + | chr8_2:60434166-60434185 | None:intergenic | 40.0% | |
ATCTACGCAGTTCTGTTATC+TGG | - | chr8_2:60434886-60434905 | Msa1259030:CDS | 40.0% | |
! | TCTGGAGTAGACAAAATCAG+TGG | - | chr8_2:60434904-60434923 | Msa1259030:CDS | 40.0% |
GTAGCACAACTTCAGCTTTA+TGG | + | chr8_2:60434983-60435002 | None:intergenic | 40.0% | |
! | GCATGGCTAACATTTTGTGT+TGG | + | chr8_2:60435074-60435093 | None:intergenic | 40.0% |
!!! | CGTTTTGTTGGAAGCATTGT+AGG | + | chr8_2:60435097-60435116 | None:intergenic | 40.0% |
! | GAAGGTTTGAACCGTTTTGT+TGG | + | chr8_2:60435109-60435128 | None:intergenic | 40.0% |
TGATTCCAACGATAAGGAAG+TGG | - | chr8_2:60435188-60435207 | Msa1259030:intron | 40.0% | |
ATAAGCCACTTCCTTATCGT+TGG | + | chr8_2:60435196-60435215 | None:intergenic | 40.0% | |
AACGATAAGGAAGTGGCTTA+TGG | - | chr8_2:60435195-60435214 | Msa1259030:intron | 40.0% | |
!! | GATCTCAAACAAGTTGGTAG+TGG | + | chr8_2:60435247-60435266 | None:intergenic | 40.0% |
! | TGCGTTGATCTCAAACAAGT+TGG | + | chr8_2:60435253-60435272 | None:intergenic | 40.0% |
! | TTTGAGATCAACGCAATCAG+TGG | - | chr8_2:60435258-60435277 | Msa1259030:intron | 40.0% |
!! | TGAGAAAGCACTGAAGACAA+CGG | + | chr8_2:60435310-60435329 | None:intergenic | 40.0% |
CAGTGACATAGGAAACTTCA+TGG | - | chr8_2:60435400-60435419 | Msa1259030:intron | 40.0% | |
CCAGGCCTACAACATATATA+AGG | + | chr8_2:60435452-60435471 | None:intergenic | 40.0% | |
CCTTATATATGTTGTAGGCC+TGG | - | chr8_2:60435449-60435468 | Msa1259030:intron | 40.0% | |
GACTTCAGAGAAAAGCCAAT+TGG | + | chr8_2:60434166-60434185 | None:intergenic | 40.0% | |
ATCTACGCAGTTCTGTTATC+TGG | - | chr8_2:60434886-60434905 | Msa1259030:CDS | 40.0% | |
! | TCTGGAGTAGACAAAATCAG+TGG | - | chr8_2:60434904-60434923 | Msa1259030:CDS | 40.0% |
GTAGCACAACTTCAGCTTTA+TGG | + | chr8_2:60434983-60435002 | None:intergenic | 40.0% | |
! | GCATGGCTAACATTTTGTGT+TGG | + | chr8_2:60435074-60435093 | None:intergenic | 40.0% |
!!! | CGTTTTGTTGGAAGCATTGT+AGG | + | chr8_2:60435097-60435116 | None:intergenic | 40.0% |
! | GAAGGTTTGAACCGTTTTGT+TGG | + | chr8_2:60435109-60435128 | None:intergenic | 40.0% |
TGATTCCAACGATAAGGAAG+TGG | - | chr8_2:60435188-60435207 | Msa1259030:intron | 40.0% | |
ATAAGCCACTTCCTTATCGT+TGG | + | chr8_2:60435196-60435215 | None:intergenic | 40.0% | |
AACGATAAGGAAGTGGCTTA+TGG | - | chr8_2:60435195-60435214 | Msa1259030:intron | 40.0% | |
!! | GATCTCAAACAAGTTGGTAG+TGG | + | chr8_2:60435247-60435266 | None:intergenic | 40.0% |
! | TGCGTTGATCTCAAACAAGT+TGG | + | chr8_2:60435253-60435272 | None:intergenic | 40.0% |
! | TTTGAGATCAACGCAATCAG+TGG | - | chr8_2:60435258-60435277 | Msa1259030:intron | 40.0% |
!! | TGAGAAAGCACTGAAGACAA+CGG | + | chr8_2:60435310-60435329 | None:intergenic | 40.0% |
CAGTGACATAGGAAACTTCA+TGG | - | chr8_2:60435400-60435419 | Msa1259030:intron | 40.0% | |
CCAGGCCTACAACATATATA+AGG | + | chr8_2:60435452-60435471 | None:intergenic | 40.0% | |
CCTTATATATGTTGTAGGCC+TGG | - | chr8_2:60435449-60435468 | Msa1259030:intron | 40.0% | |
ACTTACCTTGTCCCTGCTTA+GGG | + | chr8_2:60434336-60434355 | None:intergenic | 45.0% | |
TACTTACCTTGTCCCTGCTT+AGG | + | chr8_2:60434337-60434356 | None:intergenic | 45.0% | |
ATGATGAGTCTGTTCCAGCT+GGG | + | chr8_2:60434954-60434973 | None:intergenic | 45.0% | |
TATGATGAGTCTGTTCCAGC+TGG | + | chr8_2:60434955-60434974 | None:intergenic | 45.0% | |
AAAGCTGAAGTTGTGCTACG+CGG | - | chr8_2:60434984-60435003 | Msa1259030:intron | 45.0% | |
AAACGGTTCAAACCTTCGAG+TGG | - | chr8_2:60435112-60435131 | Msa1259030:intron | 45.0% | |
ACTTACCTTGTCCCTGCTTA+GGG | + | chr8_2:60434336-60434355 | None:intergenic | 45.0% | |
TACTTACCTTGTCCCTGCTT+AGG | + | chr8_2:60434337-60434356 | None:intergenic | 45.0% | |
ATGATGAGTCTGTTCCAGCT+GGG | + | chr8_2:60434954-60434973 | None:intergenic | 45.0% | |
TATGATGAGTCTGTTCCAGC+TGG | + | chr8_2:60434955-60434974 | None:intergenic | 45.0% | |
AAAGCTGAAGTTGTGCTACG+CGG | - | chr8_2:60434984-60435003 | Msa1259030:intron | 45.0% | |
AAACGGTTCAAACCTTCGAG+TGG | - | chr8_2:60435112-60435131 | Msa1259030:intron | 45.0% | |
TATGGCAGCACACAAGCTTG+TGG | - | chr8_2:60434219-60434238 | Msa1259030:three_prime_UTR | 50.0% | |
AGGGGAAGCTGTGACTTCAA+GGG | + | chr8_2:60434317-60434336 | None:intergenic | 50.0% | |
TAGGGGAAGCTGTGACTTCA+AGG | + | chr8_2:60434318-60434337 | None:intergenic | 50.0% | |
CTTACCTTGTCCCTGCTTAG+GGG | + | chr8_2:60434335-60434354 | None:intergenic | 50.0% | |
TGGCCAGGTTTAATGGAGTC+CGG | - | chr8_2:60434626-60434645 | Msa1259030:CDS | 50.0% | |
ACACCGGACTCCATTAAACC+TGG | + | chr8_2:60434632-60434651 | None:intergenic | 50.0% | |
CTAAACAAGACCTTCCCAGC+TGG | - | chr8_2:60434937-60434956 | Msa1259030:intron | 50.0% | |
!!! | AGCGCGGTCTTTTTGGCTTA+TGG | + | chr8_2:60435010-60435029 | None:intergenic | 50.0% |
TAAGCCAAAAAGACCGCGCT+TGG | - | chr8_2:60435010-60435029 | Msa1259030:intron | 50.0% | |
! | TTCTCCAAGCGCGGTCTTTT+TGG | + | chr8_2:60435017-60435036 | None:intergenic | 50.0% |
AGACCGAGGATGAACTCTCT+AGG | - | chr8_2:60435037-60435056 | Msa1259030:intron | 50.0% | |
GACCGAGGATGAACTCTCTA+GGG | - | chr8_2:60435038-60435057 | Msa1259030:intron | 50.0% | |
GTCCCTAGAGAGTTCATCCT+CGG | + | chr8_2:60435043-60435062 | None:intergenic | 50.0% | |
!! | GTTGGAAGCATTGTAGGGCA+TGG | + | chr8_2:60435091-60435110 | None:intergenic | 50.0% |
CGTACAAAGTACGTTGCCTG+AGG | + | chr8_2:60435156-60435175 | None:intergenic | 50.0% | |
TTATGGCCAAACCACGAACG+CGG | - | chr8_2:60435212-60435231 | Msa1259030:intron | 50.0% | |
AGATATCAAGAGTCGCGTGG+CGG | + | chr8_2:60435284-60435303 | None:intergenic | 50.0% | |
AGCAGATATCAAGAGTCGCG+TGG | + | chr8_2:60435287-60435306 | None:intergenic | 50.0% | |
GCTTTCTCAGTTGTGTCCCT+AGG | - | chr8_2:60435321-60435340 | Msa1259030:intron | 50.0% | |
TATGGCAGCACACAAGCTTG+TGG | - | chr8_2:60434219-60434238 | Msa1259030:three_prime_UTR | 50.0% | |
AGGGGAAGCTGTGACTTCAA+GGG | + | chr8_2:60434317-60434336 | None:intergenic | 50.0% | |
TAGGGGAAGCTGTGACTTCA+AGG | + | chr8_2:60434318-60434337 | None:intergenic | 50.0% | |
CTTACCTTGTCCCTGCTTAG+GGG | + | chr8_2:60434335-60434354 | None:intergenic | 50.0% | |
TGGCCAGGTTTAATGGAGTC+CGG | - | chr8_2:60434626-60434645 | Msa1259030:CDS | 50.0% | |
ACACCGGACTCCATTAAACC+TGG | + | chr8_2:60434632-60434651 | None:intergenic | 50.0% | |
CTAAACAAGACCTTCCCAGC+TGG | - | chr8_2:60434937-60434956 | Msa1259030:intron | 50.0% | |
!!! | AGCGCGGTCTTTTTGGCTTA+TGG | + | chr8_2:60435010-60435029 | None:intergenic | 50.0% |
TAAGCCAAAAAGACCGCGCT+TGG | - | chr8_2:60435010-60435029 | Msa1259030:intron | 50.0% | |
! | TTCTCCAAGCGCGGTCTTTT+TGG | + | chr8_2:60435017-60435036 | None:intergenic | 50.0% |
AGACCGAGGATGAACTCTCT+AGG | - | chr8_2:60435037-60435056 | Msa1259030:intron | 50.0% | |
GACCGAGGATGAACTCTCTA+GGG | - | chr8_2:60435038-60435057 | Msa1259030:intron | 50.0% | |
GTCCCTAGAGAGTTCATCCT+CGG | + | chr8_2:60435043-60435062 | None:intergenic | 50.0% | |
!! | GTTGGAAGCATTGTAGGGCA+TGG | + | chr8_2:60435091-60435110 | None:intergenic | 50.0% |
CGTACAAAGTACGTTGCCTG+AGG | + | chr8_2:60435156-60435175 | None:intergenic | 50.0% | |
TTATGGCCAAACCACGAACG+CGG | - | chr8_2:60435212-60435231 | Msa1259030:intron | 50.0% | |
AGATATCAAGAGTCGCGTGG+CGG | + | chr8_2:60435284-60435303 | None:intergenic | 50.0% | |
AGCAGATATCAAGAGTCGCG+TGG | + | chr8_2:60435287-60435306 | None:intergenic | 50.0% | |
GCTTTCTCAGTTGTGTCCCT+AGG | - | chr8_2:60435321-60435340 | Msa1259030:intron | 50.0% | |
AGTCACAGCTTCCCCTAAGC+AGG | - | chr8_2:60434321-60434340 | Msa1259030:three_prime_UTR | 55.0% | |
GTCACAGCTTCCCCTAAGCA+GGG | - | chr8_2:60434322-60434341 | Msa1259030:three_prime_UTR | 55.0% | |
TGAGTCTGTTCCAGCTGGGA+AGG | + | chr8_2:60434950-60434969 | None:intergenic | 55.0% | |
GCGCTGAATCAACCACTCGA+AGG | + | chr8_2:60435127-60435146 | None:intergenic | 55.0% | |
TATGGCCAAACCACGAACGC+GGG | - | chr8_2:60435213-60435232 | Msa1259030:intron | 55.0% | |
TCTTACCCGCGTTCGTGGTT+TGG | + | chr8_2:60435221-60435240 | None:intergenic | 55.0% | |
AGTCACAGCTTCCCCTAAGC+AGG | - | chr8_2:60434321-60434340 | Msa1259030:three_prime_UTR | 55.0% | |
GTCACAGCTTCCCCTAAGCA+GGG | - | chr8_2:60434322-60434341 | Msa1259030:three_prime_UTR | 55.0% | |
TGAGTCTGTTCCAGCTGGGA+AGG | + | chr8_2:60434950-60434969 | None:intergenic | 55.0% | |
GCGCTGAATCAACCACTCGA+AGG | + | chr8_2:60435127-60435146 | None:intergenic | 55.0% | |
TATGGCCAAACCACGAACGC+GGG | - | chr8_2:60435213-60435232 | Msa1259030:intron | 55.0% | |
TCTTACCCGCGTTCGTGGTT+TGG | + | chr8_2:60435221-60435240 | None:intergenic | 55.0% | |
GCTTCCCCTAAGCAGGGACA+AGG | - | chr8_2:60434328-60434347 | Msa1259030:three_prime_UTR | 60.0% | |
CCTCGGTCTTTCTCCAAGCG+CGG | + | chr8_2:60435026-60435045 | None:intergenic | 60.0% | |
GGTACTCTTACCCGCGTTCG+TGG | + | chr8_2:60435226-60435245 | None:intergenic | 60.0% | |
GCTTCCCCTAAGCAGGGACA+AGG | - | chr8_2:60434328-60434347 | Msa1259030:three_prime_UTR | 60.0% | |
CCTCGGTCTTTCTCCAAGCG+CGG | + | chr8_2:60435026-60435045 | None:intergenic | 60.0% | |
GGTACTCTTACCCGCGTTCG+TGG | + | chr8_2:60435226-60435245 | None:intergenic | 60.0% | |
CCGCGCTTGGAGAAAGACCG+AGG | - | chr8_2:60435023-60435042 | Msa1259030:intron | 65.0% | |
GATTCAGCGCGACGTGCCTC+AGG | - | chr8_2:60435137-60435156 | Msa1259030:intron | 65.0% | |
CCGCGCTTGGAGAAAGACCG+AGG | - | chr8_2:60435023-60435042 | Msa1259030:intron | 65.0% | |
GATTCAGCGCGACGTGCCTC+AGG | - | chr8_2:60435137-60435156 | Msa1259030:intron | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8_2 | gene | 60434132 | 60435704 | 60434132 | ID=Msa1259030;Name=Msa1259030 |
chr8_2 | mRNA | 60434132 | 60435704 | 60434132 | ID=Msa1259030-mRNA-1;Parent=Msa1259030;Name=Msa1259030-mRNA-1;_AED=0.00;_eAED=0.00;_QI=88|1|1|1|1|1|2|312|208 |
chr8_2 | exon | 60434132 | 60434940 | 60434132 | ID=Msa1259030-mRNA-1:exon:18951;Parent=Msa1259030-mRNA-1 |
chr8_2 | exon | 60435487 | 60435704 | 60435487 | ID=Msa1259030-mRNA-1:exon:18950;Parent=Msa1259030-mRNA-1 |
chr8_2 | five_prime_UTR | 60435617 | 60435704 | 60435617 | ID=Msa1259030-mRNA-1:five_prime_utr;Parent=Msa1259030-mRNA-1 |
chr8_2 | CDS | 60435487 | 60435616 | 60435487 | ID=Msa1259030-mRNA-1:cds;Parent=Msa1259030-mRNA-1 |
chr8_2 | CDS | 60434444 | 60434940 | 60434444 | ID=Msa1259030-mRNA-1:cds;Parent=Msa1259030-mRNA-1 |
chr8_2 | three_prime_UTR | 60434132 | 60434443 | 60434132 | ID=Msa1259030-mRNA-1:three_prime_utr;Parent=Msa1259030-mRNA-1 |
Gene Sequence |
Protein sequence |