Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1419200 | sp|Q9FGS5|NRT31_ARATH | 51.185 | 211 | 90 | 6 | 1 | 204 | 1 | 205 | 1.58e-63 | 199 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1419200 | I3SMV0 | 97.596 | 208 | 3 | 1 | 1 | 208 | 1 | 206 | 2.71e-148 | 419 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0034540 | Msa1419200 | 0.837065 | 6.473695e-57 | -8.615850e-47 |
| Msa0034590 | Msa1419200 | -0.825869 | 3.705048e-54 | -8.615850e-47 |
| Msa0037040 | Msa1419200 | -0.810083 | 1.375070e-50 | -8.615850e-47 |
| Msa0047630 | Msa1419200 | -0.827525 | 1.490950e-54 | -8.615850e-47 |
| Msa0078110 | Msa1419200 | -0.832550 | 8.866746e-56 | -8.615850e-47 |
| Msa0107830 | Msa1419200 | 0.826638 | 2.430605e-54 | -8.615850e-47 |
| Msa0117650 | Msa1419200 | 0.815603 | 8.496742e-52 | -8.615850e-47 |
| Msa1377050 | Msa1419200 | 0.807094 | 5.978283e-50 | -8.615850e-47 |
| Msa1386910 | Msa1419200 | -0.801953 | 7.059664e-49 | -8.615850e-47 |
| Msa1387610 | Msa1419200 | 0.832178 | 1.096087e-55 | -8.615850e-47 |
| Msa1390200 | Msa1419200 | 0.826498 | 2.624226e-54 | -8.615850e-47 |
| Msa1395200 | Msa1419200 | -0.804436 | 2.161908e-49 | -8.615850e-47 |
| Msa1395250 | Msa1419200 | 0.813716 | 2.222988e-51 | -8.615850e-47 |
| Msa1395380 | Msa1419200 | -0.800528 | 1.381313e-48 | -8.615850e-47 |
| Msa1398120 | Msa1419200 | 0.812061 | 5.124044e-51 | -8.615850e-47 |
| Msa1405500 | Msa1419200 | 0.802508 | 5.425827e-49 | -8.615850e-47 |
| Msa1407040 | Msa1419200 | 0.810798 | 9.638250e-51 | -8.615850e-47 |
| Msa1415510 | Msa1419200 | -0.802447 | 5.587190e-49 | -8.615850e-47 |
| Msa1419200 | Msa1419210 | 0.824826 | 6.538451e-54 | -8.615850e-47 |
| Msa1419200 | Msa1434860 | -0.801527 | 8.632764e-49 | -8.615850e-47 |
| Msa1419200 | Msa1437590 | 0.804497 | 2.100072e-49 | -8.615850e-47 |
| Msa1419200 | Msa1438160 | 0.821704 | 3.505270e-53 | -8.615850e-47 |
| Msa1419200 | Msa1449470 | 0.839988 | 1.139455e-57 | -8.615850e-47 |
| Msa1419200 | Msa1454300 | -0.801080 | 1.065814e-48 | -8.615850e-47 |
| Msa1419200 | Msa1459920 | 0.834891 | 2.305075e-56 | -8.615850e-47 |
| Msa1419200 | Msa1459930 | 0.850180 | 2.005474e-60 | -8.615850e-47 |
| Msa0606340 | Msa1419200 | -0.805421 | 1.345581e-49 | -8.615850e-47 |
| Msa0637590 | Msa1419200 | 0.805924 | 1.055601e-49 | -8.615850e-47 |
| Msa0644340 | Msa1419200 | 0.804268 | 2.343938e-49 | -8.615850e-47 |
| Msa0648840 | Msa1419200 | -0.827303 | 1.685105e-54 | -8.615850e-47 |
| Msa0657260 | Msa1419200 | 0.832359 | 9.890140e-56 | -8.615850e-47 |
| Msa0666950 | Msa1419200 | 0.811750 | 5.989354e-51 | -8.615850e-47 |
| Msa0670170 | Msa1419200 | 0.804408 | 2.190984e-49 | -8.615850e-47 |
| Msa0675590 | Msa1419200 | 0.814897 | 1.219181e-51 | -8.615850e-47 |
| Msa0684390 | Msa1419200 | 0.805659 | 1.199431e-49 | -8.615850e-47 |
| Msa0693050 | Msa1419200 | -0.807270 | 5.485699e-50 | -8.615850e-47 |
| Msa0695250 | Msa1419200 | -0.806418 | 8.307352e-50 | -8.615850e-47 |
| Msa0701490 | Msa1419200 | 0.838186 | 3.339127e-57 | -8.615850e-47 |
| Msa0701560 | Msa1419200 | 0.837589 | 4.753932e-57 | -8.615850e-47 |
| Msa0716620 | Msa1419200 | 0.818241 | 2.171672e-52 | -8.615850e-47 |
| Msa0729740 | Msa1419200 | -0.804153 | 2.476305e-49 | -8.615850e-47 |
| Msa0731580 | Msa1419200 | 0.808289 | 3.332599e-50 | -8.615850e-47 |
| Msa0736560 | Msa1419200 | 0.810016 | 1.421421e-50 | -8.615850e-47 |
| Msa0744550 | Msa1419200 | 0.847592 | 1.049219e-59 | -8.615850e-47 |
| Msa0744560 | Msa1419200 | 0.840317 | 9.352493e-58 | -8.615850e-47 |
| Msa0744710 | Msa1419200 | 0.818248 | 2.163773e-52 | -8.615850e-47 |
| Msa0746340 | Msa1419200 | 0.833981 | 3.902246e-56 | -8.615850e-47 |
| Msa0771810 | Msa1419200 | 0.813316 | 2.723187e-51 | -8.615850e-47 |
| Msa0772350 | Msa1419200 | 0.830029 | 3.696668e-55 | -8.615850e-47 |
| Msa0788490 | Msa1419200 | -0.812674 | 3.764006e-51 | -8.615850e-47 |
| Msa0793270 | Msa1419200 | 0.807013 | 6.220198e-50 | -8.615850e-47 |
| Msa0795320 | Msa1419200 | 0.826635 | 2.434797e-54 | -8.615850e-47 |
| Msa0809920 | Msa1419200 | 0.828606 | 8.186740e-55 | -8.615850e-47 |
| Msa0812050 | Msa1419200 | 0.819785 | 9.677386e-53 | -8.615850e-47 |
| Msa0816390 | Msa1419200 | -0.818982 | 1.475024e-52 | -8.615850e-47 |
| Msa0826240 | Msa1419200 | 0.821160 | 4.679224e-53 | -8.615850e-47 |
| Msa0826360 | Msa1419200 | 0.844872 | 5.776527e-59 | -8.615850e-47 |
| Msa0826370 | Msa1419200 | 0.820631 | 6.194166e-53 | -8.615850e-47 |
| Msa0826450 | Msa1419200 | 0.803131 | 4.035308e-49 | -8.615850e-47 |
| Msa0833980 | Msa1419200 | -0.804992 | 1.655118e-49 | -8.615850e-47 |
| Msa0129290 | Msa1419200 | 0.833434 | 5.344330e-56 | -8.615850e-47 |
| Msa0129770 | Msa1419200 | 0.818682 | 1.725346e-52 | -8.615850e-47 |
| Msa0129820 | Msa1419200 | -0.809977 | 1.449410e-50 | -8.615850e-47 |
| Msa0143640 | Msa1419200 | 0.827059 | 1.928016e-54 | -8.615850e-47 |
| Msa0143830 | Msa1419200 | 0.822830 | 1.920547e-53 | -8.615850e-47 |
| Msa0164350 | Msa1419200 | 0.839827 | 1.255305e-57 | -8.615850e-47 |
| Msa0167160 | Msa1419200 | -0.800671 | 1.292032e-48 | -8.615850e-47 |
| Msa1239190 | Msa1419200 | 0.824954 | 6.099165e-54 | -8.615850e-47 |
| Msa1245890 | Msa1419200 | 0.993292 | 9.761801e-199 | -8.615850e-47 |
| Msa1254870 | Msa1419200 | 0.812586 | 3.934543e-51 | -8.615850e-47 |
| Msa1259030 | Msa1419200 | 0.993000 | 8.458559e-197 | -8.615850e-47 |
| Msa1263500 | Msa1419200 | 0.827446 | 1.557275e-54 | -8.615850e-47 |
| Msa1264940 | Msa1419200 | 0.810297 | 1.236576e-50 | -8.615850e-47 |
| Msa1299480 | Msa1419200 | 0.842497 | 2.493910e-58 | -8.615850e-47 |
| Msa1303150 | Msa1419200 | 0.807660 | 4.535435e-50 | -8.615850e-47 |
| Msa1328430 | Msa1419200 | 0.813686 | 2.257769e-51 | -8.615850e-47 |
| Msa1333700 | Msa1419200 | 0.813070 | 3.082736e-51 | -8.615850e-47 |
| Msa1334000 | Msa1419200 | 0.819967 | 8.791716e-53 | -8.615850e-47 |
| Msa0370360 | Msa1419200 | 0.852128 | 5.654565e-61 | -8.615850e-47 |
| Msa0390200 | Msa1419200 | 0.823844 | 1.112624e-53 | -8.615850e-47 |
| Msa0419150 | Msa1419200 | -0.802761 | 4.811197e-49 | -8.615850e-47 |
| Msa0421080 | Msa1419200 | 0.832601 | 8.615303e-56 | -8.615850e-47 |
| Msa0429840 | Msa1419200 | 0.814795 | 1.284400e-51 | -8.615850e-47 |
| Msa0433090 | Msa1419200 | 0.813322 | 2.714568e-51 | -8.615850e-47 |
| Msa0433890 | Msa1419200 | -0.809165 | 2.165697e-50 | -8.615850e-47 |
| Msa0434460 | Msa1419200 | 0.811964 | 5.378289e-51 | -8.615850e-47 |
| Msa0464980 | Msa1419200 | -0.802102 | 6.580114e-49 | -8.615850e-47 |
| Msa0480540 | Msa1419200 | 0.849127 | 3.948190e-60 | -8.615850e-47 |
| Msa0480550 | Msa1419200 | 0.841117 | 5.772549e-58 | -8.615850e-47 |
| Msa1020490 | Msa1419200 | -0.801016 | 1.098530e-48 | -8.615850e-47 |
| Msa1023430 | Msa1419200 | 0.812619 | 3.870251e-51 | -8.615850e-47 |
| Msa1026890 | Msa1419200 | 0.800897 | 1.161449e-48 | -8.615850e-47 |
| Msa1027910 | Msa1419200 | 0.801660 | 8.107733e-49 | -8.615850e-47 |
| Msa1030210 | Msa1419200 | 0.843062 | 1.765256e-58 | -8.615850e-47 |
| Msa1061840 | Msa1419200 | 0.829169 | 5.982474e-55 | -8.615850e-47 |
| Msa1064240 | Msa1419200 | 0.816113 | 6.537375e-52 | -8.615850e-47 |
| Msa1069250 | Msa1419200 | 0.829195 | 5.896045e-55 | -8.615850e-47 |
| Msa1085820 | Msa1419200 | 0.814775 | 1.297325e-51 | -8.615850e-47 |
| Msa1102210 | Msa1419200 | 0.816036 | 6.800838e-52 | -8.615850e-47 |
| Msa0267900 | Msa1419200 | 0.809578 | 1.765920e-50 | -8.615850e-47 |
| Msa0271700 | Msa1419200 | 0.835338 | 1.778382e-56 | -8.615850e-47 |
| Msa0271720 | Msa1419200 | 0.827424 | 1.576858e-54 | -8.615850e-47 |
| Msa0324810 | Msa1419200 | 0.808003 | 3.833380e-50 | -8.615850e-47 |
| Msa1107510 | Msa1419200 | 0.814041 | 1.885187e-51 | -8.615850e-47 |
| Msa1110900 | Msa1419200 | 0.826253 | 3.002026e-54 | -8.615850e-47 |
| Msa1120580 | Msa1419200 | 0.813468 | 2.520880e-51 | -8.615850e-47 |
| Msa1131120 | Msa1419200 | 0.811777 | 5.907433e-51 | -8.615850e-47 |
| Msa1137750 | Msa1419200 | 0.819256 | 1.277595e-52 | -8.615850e-47 |
| Msa1151070 | Msa1419200 | 0.814664 | 1.373185e-51 | -8.615850e-47 |
| Msa1154240 | Msa1419200 | 0.819787 | 9.668505e-53 | -8.615850e-47 |
| Msa1185270 | Msa1419200 | 0.803071 | 4.151807e-49 | -8.615850e-47 |
| Msa1202110 | Msa1419200 | 0.812857 | 3.432167e-51 | -8.615850e-47 |
| Msa1208840 | Msa1419200 | 0.958657 | 1.368478e-116 | -8.615850e-47 |
| Msa1208920 | Msa1419200 | 0.934907 | 1.949776e-96 | -8.615850e-47 |
| Msa1211610 | Msa1419200 | 0.845062 | 5.131272e-59 | -8.615850e-47 |
| Msa1211930 | Msa1419200 | -0.801275 | 9.721776e-49 | -8.615850e-47 |
| Msa1212150 | Msa1419200 | -0.800235 | 1.585086e-48 | -8.615850e-47 |
| Msa1221520 | Msa1419200 | 0.804036 | 2.619648e-49 | -8.615850e-47 |
| Msa1223560 | Msa1419200 | 0.839411 | 1.609859e-57 | -8.615850e-47 |
| Msa1224510 | Msa1419200 | 0.831875 | 1.302778e-55 | -8.615850e-47 |
| Msa0500910 | Msa1419200 | 0.814000 | 1.924674e-51 | -8.615850e-47 |
| Msa0523980 | Msa1419200 | 0.803453 | 3.461237e-49 | -8.615850e-47 |
| Msa0524710 | Msa1419200 | 0.804103 | 2.537099e-49 | -8.615850e-47 |
| Msa0550980 | Msa1419200 | -0.805248 | 1.463277e-49 | -8.615850e-47 |
| Msa0554770 | Msa1419200 | -0.804576 | 2.021749e-49 | -8.615850e-47 |
| Msa0557440 | Msa1419200 | -0.802391 | 5.736022e-49 | -8.615850e-47 |
| Msa0565120 | Msa1419200 | 0.858094 | 1.042546e-62 | -8.615850e-47 |
| Msa0572700 | Msa1419200 | 0.801034 | 1.089202e-48 | -8.615850e-47 |
| Msa0580840 | Msa1419200 | 0.823048 | 1.708359e-53 | -8.615850e-47 |
| Msa0588040 | Msa1419200 | 0.801622 | 8.255146e-49 | -8.615850e-47 |
| Msa0594250 | Msa1419200 | 0.819005 | 1.457428e-52 | -8.615850e-47 |
| Msa0597370 | Msa1419200 | -0.810131 | 1.342803e-50 | -8.615850e-47 |
| Msa0597820 | Msa1419200 | 0.809666 | 1.690167e-50 | -8.615850e-47 |
| Msa0848020 | Msa1419200 | 0.820094 | 8.223947e-53 | -8.615850e-47 |
| Msa0850480 | Msa1419200 | 0.817412 | 3.342475e-52 | -8.615850e-47 |
| Msa0856080 | Msa1419200 | 0.807911 | 4.010362e-50 | -8.615850e-47 |
| Msa0859040 | Msa1419200 | 0.802402 | 5.707989e-49 | -8.615850e-47 |
| Msa0865810 | Msa1419200 | 0.812597 | 3.914185e-51 | -8.615850e-47 |
| Msa0865820 | Msa1419200 | 0.827159 | 1.825057e-54 | -8.615850e-47 |
| Msa0865830 | Msa1419200 | 0.841006 | 6.170718e-58 | -8.615850e-47 |
| Msa0874750 | Msa1419200 | 0.823590 | 1.276173e-53 | -8.615850e-47 |
| Msa0879940 | Msa1419200 | -0.826866 | 2.144031e-54 | -8.615850e-47 |
| Msa0945160 | Msa1419200 | -0.801449 | 8.956792e-49 | -8.615850e-47 |
| Msa0966580 | Msa1419200 | 0.810177 | 1.312100e-50 | -8.615850e-47 |
| Msa0976400 | Msa1419200 | 0.817786 | 2.751948e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1419200 | MtrunA17_Chr4g0058311 | 97.596 | 208 | 3 | 1 | 1 | 208 | 1 | 206 | 5.22e-152 | 419 |
| Msa1419200 | MtrunA17_Chr4g0058331 | 97.115 | 208 | 4 | 1 | 1 | 208 | 1 | 206 | 7.41e-152 | 419 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1419200 | AT5G50200.1 | 51.185 | 211 | 90 | 6 | 1 | 204 | 1 | 205 | 1.60e-64 | 199 |
| Msa1419200 | AT5G50200.3 | 51.185 | 211 | 90 | 6 | 1 | 204 | 1 | 205 | 1.60e-64 | 199 |
| Msa1419200 | AT5G50200.2 | 51.185 | 211 | 90 | 6 | 1 | 204 | 1 | 205 | 1.60e-64 | 199 |
| Msa1419200 | AT4G24715.1 | 50.239 | 209 | 94 | 6 | 1 | 204 | 23 | 226 | 2.80e-63 | 196 |
Find 64 sgRNAs with CRISPR-Local
Find 201 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTAGCACAACTTCAGCTTTA+TGG | 0.134503 | tig0024683:-20079 | None:intergenic |
| AAAATTTATGTCATAGAAAT+AGG | 0.214599 | tig0024683:+20699 | Msa1419200:three_prime_UTR |
| ATCTACGCAGTTCTGTTATC+TGG | 0.302271 | tig0024683:+19985 | Msa1419200:intron |
| CTATAGCTCCTATGACTATA+TGG | 0.312141 | tig0024683:+20629 | Msa1419200:three_prime_UTR |
| ACTTACCTTGTCCCTGCTTA+GGG | 0.312527 | tig0024683:-19432 | None:intergenic |
| TTATGCCTTATATATGTTGT+AGG | 0.313435 | tig0024683:+20543 | Msa1419200:three_prime_UTR |
| AGAGAAAAGCCAATTGGAAT+TGG | 0.326415 | tig0024683:-19256 | None:intergenic |
| TACTTACCTTGTCCCTGCTT+AGG | 0.355450 | tig0024683:-19433 | None:intergenic |
| TGTTTAGCTGAACTTTGTTA+TGG | 0.379387 | tig0024683:+19361 | Msa1419200:CDS |
| ACTGAATTCAATTACTGCTT+TGG | 0.387524 | tig0024683:-20480 | None:intergenic |
| CCAGGCCTACAACATATATA+AGG | 0.400830 | tig0024683:-20548 | None:intergenic |
| AACGATAAGGAAGTGGCTTA+TGG | 0.411170 | tig0024683:+20294 | Msa1419200:CDS |
| TAGGGGAAGCTGTGACTTCA+AGG | 0.413086 | tig0024683:-19414 | None:intergenic |
| TGCATTTGATTCCAACGATA+AGG | 0.421816 | tig0024683:+20281 | Msa1419200:CDS |
| AATATCATTCCAATTCCAAT+TGG | 0.435193 | tig0024683:+19247 | Msa1419200:five_prime_UTR |
| CAGTGACATAGGAAACTTCA+TGG | 0.450404 | tig0024683:+20499 | Msa1419200:three_prime_UTR |
| AGTGAAAACCATATAGTCAT+AGG | 0.457048 | tig0024683:-20637 | None:intergenic |
| GCTTTCTCAGTTGTGTCCCT+AGG | 0.459425 | tig0024683:+20420 | Msa1419200:CDS |
| AGTCACAGCTTCCCCTAAGC+AGG | 0.463378 | tig0024683:+19420 | Msa1419200:CDS |
| CCTTATATATGTTGTAGGCC+TGG | 0.464256 | tig0024683:+20548 | Msa1419200:three_prime_UTR |
| GGTACTCTTACCCGCGTTCG+TGG | 0.464298 | tig0024683:-20322 | None:intergenic |
| GACTTCAGAGAAAAGCCAAT+TGG | 0.464343 | tig0024683:-19262 | None:intergenic |
| AAAGAAAAGTCAACTGTGAA+AGG | 0.477653 | tig0024683:-19290 | None:intergenic |
| AGCTGAACTTTGTTATGGAA+AGG | 0.496120 | tig0024683:+19366 | Msa1419200:CDS |
| ATAAGCCACTTCCTTATCGT+TGG | 0.499427 | tig0024683:-20292 | None:intergenic |
| GTAATTGAATTCAGTGACAT+AGG | 0.512101 | tig0024683:+20488 | Msa1419200:exon |
| AGACCGAGGATGAACTCTCT+AGG | 0.513840 | tig0024683:+20136 | Msa1419200:CDS |
| TATGATGAGTCTGTTCCAGC+TGG | 0.517572 | tig0024683:-20051 | None:intergenic |
| ATGTCATAGAAATAGGAGTC+AGG | 0.520060 | tig0024683:+20706 | Msa1419200:three_prime_UTR |
| TGATTCCAACGATAAGGAAG+TGG | 0.521314 | tig0024683:+20287 | Msa1419200:CDS |
| CTAAACAAGACCTTCCCAGC+TGG | 0.523958 | tig0024683:+20036 | Msa1419200:CDS |
| GTTGGAAGCATTGTAGGGCA+TGG | 0.526614 | tig0024683:-20187 | None:intergenic |
| AAGAAAAGTCAACTGTGAAA+GGG | 0.535727 | tig0024683:-19289 | None:intergenic |
| TGAGTCTGTTCCAGCTGGGA+AGG | 0.539300 | tig0024683:-20046 | None:intergenic |
| TGCGTTGATCTCAAACAAGT+TGG | 0.539862 | tig0024683:-20349 | None:intergenic |
| CTACAATGCTTCCAACAAAA+CGG | 0.541838 | tig0024683:+20194 | Msa1419200:CDS |
| GTCCCTAGAGAGTTCATCCT+CGG | 0.558273 | tig0024683:-20139 | None:intergenic |
| TAGACAAAATCAGTGGAACA+TGG | 0.559795 | tig0024683:+20010 | Msa1419200:CDS |
| GACCGAGGATGAACTCTCTA+GGG | 0.561011 | tig0024683:+20137 | Msa1419200:CDS |
| AGGGGAAGCTGTGACTTCAA+GGG | 0.577454 | tig0024683:-19413 | None:intergenic |
| CTTACCTTGTCCCTGCTTAG+GGG | 0.578473 | tig0024683:-19431 | None:intergenic |
| GATCTCAAACAAGTTGGTAG+TGG | 0.584307 | tig0024683:-20343 | None:intergenic |
| ACTGATAATATTATTTAACC+AGG | 0.587057 | tig0024683:-20566 | None:intergenic |
| CAATATAGAAGAACACACCT+AGG | 0.601286 | tig0024683:-20437 | None:intergenic |
| TTTGAGATCAACGCAATCAG+TGG | 0.604199 | tig0024683:+20357 | Msa1419200:CDS |
| AGACAAAATCAGTGGAACAT+GGG | 0.618150 | tig0024683:+20011 | Msa1419200:CDS |
| ATCGTTGGAATCAAATGCAT+AGG | 0.623735 | tig0024683:-20277 | None:intergenic |
| GTCACAGCTTCCCCTAAGCA+GGG | 0.629784 | tig0024683:+19421 | Msa1419200:CDS |
| TATGGCCAAACCACGAACGC+GGG | 0.634750 | tig0024683:+20312 | Msa1419200:CDS |
| TTATGGCCAAACCACGAACG+CGG | 0.634987 | tig0024683:+20311 | Msa1419200:CDS |
| GCTTCCCCTAAGCAGGGACA+AGG | 0.636634 | tig0024683:+19427 | Msa1419200:CDS |
| GCGCTGAATCAACCACTCGA+AGG | 0.649799 | tig0024683:-20223 | None:intergenic |
| CCTCGGTCTTTCTCCAAGCG+CGG | 0.651070 | tig0024683:-20122 | None:intergenic |
| AATATAGAAGAACACACCTA+GGG | 0.653049 | tig0024683:-20436 | None:intergenic |
| TATGGCAGCACACAAGCTTG+TGG | 0.654698 | tig0024683:+19318 | Msa1419200:exon |
| TCTGGAGTAGACAAAATCAG+TGG | 0.660740 | tig0024683:+20003 | Msa1419200:CDS |
| TGAGAAAGCACTGAAGACAA+CGG | 0.661115 | tig0024683:-20406 | None:intergenic |
| AAACGGTTCAAACCTTCGAG+TGG | 0.663100 | tig0024683:+20211 | Msa1419200:CDS |
| CGTACAAAGTACGTTGCCTG+AGG | 0.678441 | tig0024683:-20252 | None:intergenic |
| AGCAGATATCAAGAGTCGCG+TGG | 0.681698 | tig0024683:-20383 | None:intergenic |
| ATGATGAGTCTGTTCCAGCT+GGG | 0.682275 | tig0024683:-20050 | None:intergenic |
| AGATATCAAGAGTCGCGTGG+CGG | 0.700580 | tig0024683:-20380 | None:intergenic |
| CCGCGCTTGGAGAAAGACCG+AGG | 0.703551 | tig0024683:+20122 | Msa1419200:CDS |
| AAAGCTGAAGTTGTGCTACG+CGG | 0.733243 | tig0024683:+20083 | Msa1419200:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GATAAGACATTTATTTATTA+AGG | - | tig0024683:19875-19894 | None:intergenic | 15.0% |
| !! | AAAATTTATGTCATAGAAAT+AGG | + | tig0024683:20699-20718 | Msa1419200:three_prime_UTR | 15.0% |
| !! | GATAAGACATTTATTTATTA+AGG | - | tig0024683:19875-19894 | None:intergenic | 15.0% |
| !! | AAAATTTATGTCATAGAAAT+AGG | + | tig0024683:20699-20718 | Msa1419200:three_prime_UTR | 15.0% |
| !! | TTATTCAAATTCAAGAAAAG+AGG | - | tig0024683:19669-19688 | None:intergenic | 20.0% |
| !!! | GAACATTTTTCAAGAAAATT+TGG | + | tig0024683:19705-19724 | Msa1419200:intron | 20.0% |
| !! | TGTTCTTCTATATTGAAAAA+AGG | + | tig0024683:20445-20464 | Msa1419200:CDS | 20.0% |
| !! | TTCTATATTGAAAAAAGGAA+GGG | + | tig0024683:20450-20469 | Msa1419200:CDS | 20.0% |
| !! | ACTGATAATATTATTTAACC+AGG | - | tig0024683:20569-20588 | None:intergenic | 20.0% |
| !! | CATGAAATATGAAAAACTTA+GGG | - | tig0024683:20603-20622 | None:intergenic | 20.0% |
| !!! | ATATTATTCTGAAAAGAATC+TGG | - | tig0024683:19232-19251 | None:intergenic | 20.0% |
| !! | TTATTCAAATTCAAGAAAAG+AGG | - | tig0024683:19669-19688 | None:intergenic | 20.0% |
| !!! | GAACATTTTTCAAGAAAATT+TGG | + | tig0024683:19705-19724 | Msa1419200:intron | 20.0% |
| !! | TGTTCTTCTATATTGAAAAA+AGG | + | tig0024683:20445-20464 | Msa1419200:CDS | 20.0% |
| !! | TTCTATATTGAAAAAAGGAA+GGG | + | tig0024683:20450-20469 | Msa1419200:CDS | 20.0% |
| !! | ACTGATAATATTATTTAACC+AGG | - | tig0024683:20569-20588 | None:intergenic | 20.0% |
| !! | CATGAAATATGAAAAACTTA+GGG | - | tig0024683:20603-20622 | None:intergenic | 20.0% |
| ! | AATATCATTCCAATTCCAAT+TGG | + | tig0024683:19247-19266 | Msa1419200:five_prime_UTR | 25.0% |
| !!! | TTGACTTTTCTTTAGAACTA+TGG | + | tig0024683:19300-19319 | Msa1419200:exon | 25.0% |
| ! | ATAATCACATAAATCAAGGT+TGG | - | tig0024683:19639-19658 | None:intergenic | 25.0% |
| ! | GAACATAATCACATAAATCA+AGG | - | tig0024683:19643-19662 | None:intergenic | 25.0% |
| ! | TTCTTGAAAAATGTTCATAC+TGG | - | tig0024683:19701-19720 | None:intergenic | 25.0% |
| ! | CTTAATAAATAGTAACACAC+CGG | - | tig0024683:19747-19766 | None:intergenic | 25.0% |
| ! | TACATTACAAATGATCACAA+AGG | + | tig0024683:19799-19818 | Msa1419200:intron | 25.0% |
| ! | CAAGTATGCAATCATAATAT+AGG | - | tig0024683:19897-19916 | None:intergenic | 25.0% |
| !! | AAGCTGATTAAACTCAATTT+TGG | + | tig0024683:19954-19973 | Msa1419200:intron | 25.0% |
| ! | CTTCTATATTGAAAAAAGGA+AGG | + | tig0024683:20449-20468 | Msa1419200:CDS | 25.0% |
| ! | TTATGCCTTATATATGTTGT+AGG | + | tig0024683:20543-20562 | Msa1419200:three_prime_UTR | 25.0% |
| ! | CCATGAAATATGAAAAACTT+AGG | - | tig0024683:20604-20623 | None:intergenic | 25.0% |
| !! | CCTAAGTTTTTCATATTTCA+TGG | + | tig0024683:20601-20620 | Msa1419200:three_prime_UTR | 25.0% |
| !! | AGTTTTTCATATTTCATGGA+TGG | + | tig0024683:20605-20624 | Msa1419200:three_prime_UTR | 25.0% |
| ! | AATATCATTCCAATTCCAAT+TGG | + | tig0024683:19247-19266 | Msa1419200:five_prime_UTR | 25.0% |
| !!! | TTGACTTTTCTTTAGAACTA+TGG | + | tig0024683:19300-19319 | Msa1419200:exon | 25.0% |
| ! | ATAATCACATAAATCAAGGT+TGG | - | tig0024683:19639-19658 | None:intergenic | 25.0% |
| ! | GAACATAATCACATAAATCA+AGG | - | tig0024683:19643-19662 | None:intergenic | 25.0% |
| ! | TTCTTGAAAAATGTTCATAC+TGG | - | tig0024683:19701-19720 | None:intergenic | 25.0% |
| ! | CTTAATAAATAGTAACACAC+CGG | - | tig0024683:19747-19766 | None:intergenic | 25.0% |
| ! | TACATTACAAATGATCACAA+AGG | + | tig0024683:19799-19818 | Msa1419200:intron | 25.0% |
| ! | CAAGTATGCAATCATAATAT+AGG | - | tig0024683:19897-19916 | None:intergenic | 25.0% |
| !! | AAGCTGATTAAACTCAATTT+TGG | + | tig0024683:19954-19973 | Msa1419200:intron | 25.0% |
| ! | CTTCTATATTGAAAAAAGGA+AGG | + | tig0024683:20449-20468 | Msa1419200:CDS | 25.0% |
| ! | TTATGCCTTATATATGTTGT+AGG | + | tig0024683:20543-20562 | Msa1419200:three_prime_UTR | 25.0% |
| ! | CCATGAAATATGAAAAACTT+AGG | - | tig0024683:20604-20623 | None:intergenic | 25.0% |
| !! | CCTAAGTTTTTCATATTTCA+TGG | + | tig0024683:20601-20620 | Msa1419200:three_prime_UTR | 25.0% |
| !! | AGTTTTTCATATTTCATGGA+TGG | + | tig0024683:20605-20624 | Msa1419200:three_prime_UTR | 25.0% |
| AAGAAAAGTCAACTGTGAAA+GGG | - | tig0024683:19292-19311 | None:intergenic | 30.0% | |
| AAAGAAAAGTCAACTGTGAA+AGG | - | tig0024683:19293-19312 | None:intergenic | 30.0% | |
| TGTTTAGCTGAACTTTGTTA+TGG | + | tig0024683:19361-19380 | Msa1419200:CDS | 30.0% | |
| TCAAATTCAAGAAAAGAGGA+AGG | - | tig0024683:19665-19684 | None:intergenic | 30.0% | |
| !!! | TTTTTCAAGAAAATTTGGCC+AGG | + | tig0024683:19710-19729 | Msa1419200:intron | 30.0% |
| ! | CGGTGTGTTACTATTTATTA+AGG | + | tig0024683:19745-19764 | Msa1419200:intron | 30.0% |
| ATTGAGTTTAATCAGCTTGA+AGG | - | tig0024683:19952-19971 | None:intergenic | 30.0% | |
| AATATAGAAGAACACACCTA+GGG | - | tig0024683:20439-20458 | None:intergenic | 30.0% | |
| ACTGAATTCAATTACTGCTT+TGG | - | tig0024683:20483-20502 | None:intergenic | 30.0% | |
| GTAATTGAATTCAGTGACAT+AGG | + | tig0024683:20488-20507 | Msa1419200:exon | 30.0% | |
| AGTGAAAACCATATAGTCAT+AGG | - | tig0024683:20640-20659 | None:intergenic | 30.0% | |
| AAGAAAAGTCAACTGTGAAA+GGG | - | tig0024683:19292-19311 | None:intergenic | 30.0% | |
| AAAGAAAAGTCAACTGTGAA+AGG | - | tig0024683:19293-19312 | None:intergenic | 30.0% | |
| TGTTTAGCTGAACTTTGTTA+TGG | + | tig0024683:19361-19380 | Msa1419200:CDS | 30.0% | |
| TCAAATTCAAGAAAAGAGGA+AGG | - | tig0024683:19665-19684 | None:intergenic | 30.0% | |
| !!! | TTTTTCAAGAAAATTTGGCC+AGG | + | tig0024683:19710-19729 | Msa1419200:intron | 30.0% |
| ! | CGGTGTGTTACTATTTATTA+AGG | + | tig0024683:19745-19764 | Msa1419200:intron | 30.0% |
| ATTGAGTTTAATCAGCTTGA+AGG | - | tig0024683:19952-19971 | None:intergenic | 30.0% | |
| AATATAGAAGAACACACCTA+GGG | - | tig0024683:20439-20458 | None:intergenic | 30.0% | |
| ACTGAATTCAATTACTGCTT+TGG | - | tig0024683:20483-20502 | None:intergenic | 30.0% | |
| GTAATTGAATTCAGTGACAT+AGG | + | tig0024683:20488-20507 | Msa1419200:exon | 30.0% | |
| AGTGAAAACCATATAGTCAT+AGG | - | tig0024683:20640-20659 | None:intergenic | 30.0% | |
| AGAGAAAAGCCAATTGGAAT+TGG | - | tig0024683:19259-19278 | None:intergenic | 35.0% | |
| ! | AGCTGAACTTTGTTATGGAA+AGG | + | tig0024683:19366-19385 | Msa1419200:CDS | 35.0% |
| GAAAATTTGGCCAGGTTTAA+TGG | + | tig0024683:19718-19737 | Msa1419200:intron | 35.0% | |
| AAAAATTGCAACGCAACTTG+CGG | - | tig0024683:19779-19798 | None:intergenic | 35.0% | |
| TAGACAAAATCAGTGGAACA+TGG | + | tig0024683:20010-20029 | Msa1419200:CDS | 35.0% | |
| AGACAAAATCAGTGGAACAT+GGG | + | tig0024683:20011-20030 | Msa1419200:CDS | 35.0% | |
| !!! | GTTTTGTTGGAAGCATTGTA+GGG | - | tig0024683:20195-20214 | None:intergenic | 35.0% |
| CTACAATGCTTCCAACAAAA+CGG | + | tig0024683:20194-20213 | Msa1419200:CDS | 35.0% | |
| ATCGTTGGAATCAAATGCAT+AGG | - | tig0024683:20280-20299 | None:intergenic | 35.0% | |
| TGCATTTGATTCCAACGATA+AGG | + | tig0024683:20281-20300 | Msa1419200:CDS | 35.0% | |
| CAATATAGAAGAACACACCT+AGG | - | tig0024683:20440-20459 | None:intergenic | 35.0% | |
| CTATAGCTCCTATGACTATA+TGG | + | tig0024683:20629-20648 | Msa1419200:three_prime_UTR | 35.0% | |
| ! | ACTATATGGTTTTCACTCAC+TGG | + | tig0024683:20643-20662 | Msa1419200:three_prime_UTR | 35.0% |
| ATGTCATAGAAATAGGAGTC+AGG | + | tig0024683:20706-20725 | Msa1419200:three_prime_UTR | 35.0% | |
| AGAGAAAAGCCAATTGGAAT+TGG | - | tig0024683:19259-19278 | None:intergenic | 35.0% | |
| ! | AGCTGAACTTTGTTATGGAA+AGG | + | tig0024683:19366-19385 | Msa1419200:CDS | 35.0% |
| GAAAATTTGGCCAGGTTTAA+TGG | + | tig0024683:19718-19737 | Msa1419200:intron | 35.0% | |
| AAAAATTGCAACGCAACTTG+CGG | - | tig0024683:19779-19798 | None:intergenic | 35.0% | |
| TAGACAAAATCAGTGGAACA+TGG | + | tig0024683:20010-20029 | Msa1419200:CDS | 35.0% | |
| AGACAAAATCAGTGGAACAT+GGG | + | tig0024683:20011-20030 | Msa1419200:CDS | 35.0% | |
| !!! | GTTTTGTTGGAAGCATTGTA+GGG | - | tig0024683:20195-20214 | None:intergenic | 35.0% |
| CTACAATGCTTCCAACAAAA+CGG | + | tig0024683:20194-20213 | Msa1419200:CDS | 35.0% | |
| ATCGTTGGAATCAAATGCAT+AGG | - | tig0024683:20280-20299 | None:intergenic | 35.0% | |
| TGCATTTGATTCCAACGATA+AGG | + | tig0024683:20281-20300 | Msa1419200:CDS | 35.0% | |
| CAATATAGAAGAACACACCT+AGG | - | tig0024683:20440-20459 | None:intergenic | 35.0% | |
| CTATAGCTCCTATGACTATA+TGG | + | tig0024683:20629-20648 | Msa1419200:three_prime_UTR | 35.0% | |
| ! | ACTATATGGTTTTCACTCAC+TGG | + | tig0024683:20643-20662 | Msa1419200:three_prime_UTR | 35.0% |
| ATGTCATAGAAATAGGAGTC+AGG | + | tig0024683:20706-20725 | Msa1419200:three_prime_UTR | 35.0% | |
| GACTTCAGAGAAAAGCCAAT+TGG | - | tig0024683:19265-19284 | None:intergenic | 40.0% | |
| ATCTACGCAGTTCTGTTATC+TGG | + | tig0024683:19985-20004 | Msa1419200:intron | 40.0% | |
| ! | TCTGGAGTAGACAAAATCAG+TGG | + | tig0024683:20003-20022 | Msa1419200:CDS | 40.0% |
| GTAGCACAACTTCAGCTTTA+TGG | - | tig0024683:20082-20101 | None:intergenic | 40.0% | |
| ! | GCATGGCTAACATTTTGTGT+TGG | - | tig0024683:20173-20192 | None:intergenic | 40.0% |
| !!! | CGTTTTGTTGGAAGCATTGT+AGG | - | tig0024683:20196-20215 | None:intergenic | 40.0% |
| ! | GAAGGTTTGAACCGTTTTGT+TGG | - | tig0024683:20208-20227 | None:intergenic | 40.0% |
| TGATTCCAACGATAAGGAAG+TGG | + | tig0024683:20287-20306 | Msa1419200:CDS | 40.0% | |
| ATAAGCCACTTCCTTATCGT+TGG | - | tig0024683:20295-20314 | None:intergenic | 40.0% | |
| AACGATAAGGAAGTGGCTTA+TGG | + | tig0024683:20294-20313 | Msa1419200:CDS | 40.0% | |
| !! | GATCTCAAACAAGTTGGTAG+TGG | - | tig0024683:20346-20365 | None:intergenic | 40.0% |
| ! | TGCGTTGATCTCAAACAAGT+TGG | - | tig0024683:20352-20371 | None:intergenic | 40.0% |
| ! | TTTGAGATCAACGCAATCAG+TGG | + | tig0024683:20357-20376 | Msa1419200:CDS | 40.0% |
| !! | TGAGAAAGCACTGAAGACAA+CGG | - | tig0024683:20409-20428 | None:intergenic | 40.0% |
| CAGTGACATAGGAAACTTCA+TGG | + | tig0024683:20499-20518 | Msa1419200:three_prime_UTR | 40.0% | |
| CCAGGCCTACAACATATATA+AGG | - | tig0024683:20551-20570 | None:intergenic | 40.0% | |
| CCTTATATATGTTGTAGGCC+TGG | + | tig0024683:20548-20567 | Msa1419200:three_prime_UTR | 40.0% | |
| GACTTCAGAGAAAAGCCAAT+TGG | - | tig0024683:19265-19284 | None:intergenic | 40.0% | |
| ATCTACGCAGTTCTGTTATC+TGG | + | tig0024683:19985-20004 | Msa1419200:intron | 40.0% | |
| ! | TCTGGAGTAGACAAAATCAG+TGG | + | tig0024683:20003-20022 | Msa1419200:CDS | 40.0% |
| GTAGCACAACTTCAGCTTTA+TGG | - | tig0024683:20082-20101 | None:intergenic | 40.0% | |
| ! | GCATGGCTAACATTTTGTGT+TGG | - | tig0024683:20173-20192 | None:intergenic | 40.0% |
| !!! | CGTTTTGTTGGAAGCATTGT+AGG | - | tig0024683:20196-20215 | None:intergenic | 40.0% |
| ! | GAAGGTTTGAACCGTTTTGT+TGG | - | tig0024683:20208-20227 | None:intergenic | 40.0% |
| TGATTCCAACGATAAGGAAG+TGG | + | tig0024683:20287-20306 | Msa1419200:CDS | 40.0% | |
| ATAAGCCACTTCCTTATCGT+TGG | - | tig0024683:20295-20314 | None:intergenic | 40.0% | |
| AACGATAAGGAAGTGGCTTA+TGG | + | tig0024683:20294-20313 | Msa1419200:CDS | 40.0% | |
| !! | GATCTCAAACAAGTTGGTAG+TGG | - | tig0024683:20346-20365 | None:intergenic | 40.0% |
| ! | TGCGTTGATCTCAAACAAGT+TGG | - | tig0024683:20352-20371 | None:intergenic | 40.0% |
| ! | TTTGAGATCAACGCAATCAG+TGG | + | tig0024683:20357-20376 | Msa1419200:CDS | 40.0% |
| !! | TGAGAAAGCACTGAAGACAA+CGG | - | tig0024683:20409-20428 | None:intergenic | 40.0% |
| CAGTGACATAGGAAACTTCA+TGG | + | tig0024683:20499-20518 | Msa1419200:three_prime_UTR | 40.0% | |
| CCAGGCCTACAACATATATA+AGG | - | tig0024683:20551-20570 | None:intergenic | 40.0% | |
| CCTTATATATGTTGTAGGCC+TGG | + | tig0024683:20548-20567 | Msa1419200:three_prime_UTR | 40.0% | |
| ACTTACCTTGTCCCTGCTTA+GGG | - | tig0024683:19435-19454 | None:intergenic | 45.0% | |
| TACTTACCTTGTCCCTGCTT+AGG | - | tig0024683:19436-19455 | None:intergenic | 45.0% | |
| ATGATGAGTCTGTTCCAGCT+GGG | - | tig0024683:20053-20072 | None:intergenic | 45.0% | |
| TATGATGAGTCTGTTCCAGC+TGG | - | tig0024683:20054-20073 | None:intergenic | 45.0% | |
| AAAGCTGAAGTTGTGCTACG+CGG | + | tig0024683:20083-20102 | Msa1419200:CDS | 45.0% | |
| AAACGGTTCAAACCTTCGAG+TGG | + | tig0024683:20211-20230 | Msa1419200:CDS | 45.0% | |
| ACTTACCTTGTCCCTGCTTA+GGG | - | tig0024683:19435-19454 | None:intergenic | 45.0% | |
| TACTTACCTTGTCCCTGCTT+AGG | - | tig0024683:19436-19455 | None:intergenic | 45.0% | |
| ATGATGAGTCTGTTCCAGCT+GGG | - | tig0024683:20053-20072 | None:intergenic | 45.0% | |
| TATGATGAGTCTGTTCCAGC+TGG | - | tig0024683:20054-20073 | None:intergenic | 45.0% | |
| AAAGCTGAAGTTGTGCTACG+CGG | + | tig0024683:20083-20102 | Msa1419200:CDS | 45.0% | |
| AAACGGTTCAAACCTTCGAG+TGG | + | tig0024683:20211-20230 | Msa1419200:CDS | 45.0% | |
| TATGGCAGCACACAAGCTTG+TGG | + | tig0024683:19318-19337 | Msa1419200:exon | 50.0% | |
| AGGGGAAGCTGTGACTTCAA+GGG | - | tig0024683:19416-19435 | None:intergenic | 50.0% | |
| TAGGGGAAGCTGTGACTTCA+AGG | - | tig0024683:19417-19436 | None:intergenic | 50.0% | |
| CTTACCTTGTCCCTGCTTAG+GGG | - | tig0024683:19434-19453 | None:intergenic | 50.0% | |
| TGGCCAGGTTTAATGGAGTC+CGG | + | tig0024683:19725-19744 | Msa1419200:intron | 50.0% | |
| ACACCGGACTCCATTAAACC+TGG | - | tig0024683:19731-19750 | None:intergenic | 50.0% | |
| CTAAACAAGACCTTCCCAGC+TGG | + | tig0024683:20036-20055 | Msa1419200:CDS | 50.0% | |
| !!! | AGCGCGGTCTTTTTGGCTTA+TGG | - | tig0024683:20109-20128 | None:intergenic | 50.0% |
| TAAGCCAAAAAGACCGCGCT+TGG | + | tig0024683:20109-20128 | Msa1419200:CDS | 50.0% | |
| ! | TTCTCCAAGCGCGGTCTTTT+TGG | - | tig0024683:20116-20135 | None:intergenic | 50.0% |
| AGACCGAGGATGAACTCTCT+AGG | + | tig0024683:20136-20155 | Msa1419200:CDS | 50.0% | |
| GACCGAGGATGAACTCTCTA+GGG | + | tig0024683:20137-20156 | Msa1419200:CDS | 50.0% | |
| GTCCCTAGAGAGTTCATCCT+CGG | - | tig0024683:20142-20161 | None:intergenic | 50.0% | |
| !! | GTTGGAAGCATTGTAGGGCA+TGG | - | tig0024683:20190-20209 | None:intergenic | 50.0% |
| CGTACAAAGTACGTTGCCTG+AGG | - | tig0024683:20255-20274 | None:intergenic | 50.0% | |
| TTATGGCCAAACCACGAACG+CGG | + | tig0024683:20311-20330 | Msa1419200:CDS | 50.0% | |
| AGATATCAAGAGTCGCGTGG+CGG | - | tig0024683:20383-20402 | None:intergenic | 50.0% | |
| AGCAGATATCAAGAGTCGCG+TGG | - | tig0024683:20386-20405 | None:intergenic | 50.0% | |
| GCTTTCTCAGTTGTGTCCCT+AGG | + | tig0024683:20420-20439 | Msa1419200:CDS | 50.0% | |
| TATGGCAGCACACAAGCTTG+TGG | + | tig0024683:19318-19337 | Msa1419200:exon | 50.0% | |
| AGGGGAAGCTGTGACTTCAA+GGG | - | tig0024683:19416-19435 | None:intergenic | 50.0% | |
| TAGGGGAAGCTGTGACTTCA+AGG | - | tig0024683:19417-19436 | None:intergenic | 50.0% | |
| CTTACCTTGTCCCTGCTTAG+GGG | - | tig0024683:19434-19453 | None:intergenic | 50.0% | |
| TGGCCAGGTTTAATGGAGTC+CGG | + | tig0024683:19725-19744 | Msa1419200:intron | 50.0% | |
| ACACCGGACTCCATTAAACC+TGG | - | tig0024683:19731-19750 | None:intergenic | 50.0% | |
| CTAAACAAGACCTTCCCAGC+TGG | + | tig0024683:20036-20055 | Msa1419200:CDS | 50.0% | |
| !!! | AGCGCGGTCTTTTTGGCTTA+TGG | - | tig0024683:20109-20128 | None:intergenic | 50.0% |
| TAAGCCAAAAAGACCGCGCT+TGG | + | tig0024683:20109-20128 | Msa1419200:CDS | 50.0% | |
| ! | TTCTCCAAGCGCGGTCTTTT+TGG | - | tig0024683:20116-20135 | None:intergenic | 50.0% |
| AGACCGAGGATGAACTCTCT+AGG | + | tig0024683:20136-20155 | Msa1419200:CDS | 50.0% | |
| GACCGAGGATGAACTCTCTA+GGG | + | tig0024683:20137-20156 | Msa1419200:CDS | 50.0% | |
| GTCCCTAGAGAGTTCATCCT+CGG | - | tig0024683:20142-20161 | None:intergenic | 50.0% | |
| !! | GTTGGAAGCATTGTAGGGCA+TGG | - | tig0024683:20190-20209 | None:intergenic | 50.0% |
| CGTACAAAGTACGTTGCCTG+AGG | - | tig0024683:20255-20274 | None:intergenic | 50.0% | |
| TTATGGCCAAACCACGAACG+CGG | + | tig0024683:20311-20330 | Msa1419200:CDS | 50.0% | |
| AGATATCAAGAGTCGCGTGG+CGG | - | tig0024683:20383-20402 | None:intergenic | 50.0% | |
| AGCAGATATCAAGAGTCGCG+TGG | - | tig0024683:20386-20405 | None:intergenic | 50.0% | |
| GCTTTCTCAGTTGTGTCCCT+AGG | + | tig0024683:20420-20439 | Msa1419200:CDS | 50.0% | |
| AGTCACAGCTTCCCCTAAGC+AGG | + | tig0024683:19420-19439 | Msa1419200:CDS | 55.0% | |
| GTCACAGCTTCCCCTAAGCA+GGG | + | tig0024683:19421-19440 | Msa1419200:CDS | 55.0% | |
| TGAGTCTGTTCCAGCTGGGA+AGG | - | tig0024683:20049-20068 | None:intergenic | 55.0% | |
| GCGCTGAATCAACCACTCGA+AGG | - | tig0024683:20226-20245 | None:intergenic | 55.0% | |
| TATGGCCAAACCACGAACGC+GGG | + | tig0024683:20312-20331 | Msa1419200:CDS | 55.0% | |
| TCTTACCCGCGTTCGTGGTT+TGG | - | tig0024683:20320-20339 | None:intergenic | 55.0% | |
| AGTCACAGCTTCCCCTAAGC+AGG | + | tig0024683:19420-19439 | Msa1419200:CDS | 55.0% | |
| GTCACAGCTTCCCCTAAGCA+GGG | + | tig0024683:19421-19440 | Msa1419200:CDS | 55.0% | |
| TGAGTCTGTTCCAGCTGGGA+AGG | - | tig0024683:20049-20068 | None:intergenic | 55.0% | |
| GCGCTGAATCAACCACTCGA+AGG | - | tig0024683:20226-20245 | None:intergenic | 55.0% | |
| TATGGCCAAACCACGAACGC+GGG | + | tig0024683:20312-20331 | Msa1419200:CDS | 55.0% | |
| TCTTACCCGCGTTCGTGGTT+TGG | - | tig0024683:20320-20339 | None:intergenic | 55.0% | |
| GCTTCCCCTAAGCAGGGACA+AGG | + | tig0024683:19427-19446 | Msa1419200:CDS | 60.0% | |
| CCTCGGTCTTTCTCCAAGCG+CGG | - | tig0024683:20125-20144 | None:intergenic | 60.0% | |
| GGTACTCTTACCCGCGTTCG+TGG | - | tig0024683:20325-20344 | None:intergenic | 60.0% | |
| GCTTCCCCTAAGCAGGGACA+AGG | + | tig0024683:19427-19446 | Msa1419200:CDS | 60.0% | |
| CCTCGGTCTTTCTCCAAGCG+CGG | - | tig0024683:20125-20144 | None:intergenic | 60.0% | |
| GGTACTCTTACCCGCGTTCG+TGG | - | tig0024683:20325-20344 | None:intergenic | 60.0% | |
| CCGCGCTTGGAGAAAGACCG+AGG | + | tig0024683:20122-20141 | Msa1419200:CDS | 65.0% | |
| GATTCAGCGCGACGTGCCTC+AGG | + | tig0024683:20236-20255 | Msa1419200:CDS | 65.0% | |
| CCGCGCTTGGAGAAAGACCG+AGG | + | tig0024683:20122-20141 | Msa1419200:CDS | 65.0% | |
| GATTCAGCGCGACGTGCCTC+AGG | + | tig0024683:20236-20255 | Msa1419200:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0024683 | gene | 19231 | 20803 | 19231 | ID=Msa1419200;Name=Msa1419200 |
| tig0024683 | mRNA | 19231 | 20803 | 19231 | ID=Msa1419200-mRNA-1;Parent=Msa1419200;Name=Msa1419200-mRNA-1;_AED=0.00;_eAED=0.00;_QI=88|1|1|1|1|1|2|312|208 |
| tig0024683 | exon | 19231 | 19448 | 19231 | ID=Msa1419200-mRNA-1:exon:801;Parent=Msa1419200-mRNA-1 |
| tig0024683 | exon | 19995 | 20803 | 19995 | ID=Msa1419200-mRNA-1:exon:802;Parent=Msa1419200-mRNA-1 |
| tig0024683 | five_prime_UTR | 19231 | 19318 | 19231 | ID=Msa1419200-mRNA-1:five_prime_utr;Parent=Msa1419200-mRNA-1 |
| tig0024683 | CDS | 19319 | 19448 | 19319 | ID=Msa1419200-mRNA-1:cds;Parent=Msa1419200-mRNA-1 |
| tig0024683 | CDS | 19995 | 20491 | 19995 | ID=Msa1419200-mRNA-1:cds;Parent=Msa1419200-mRNA-1 |
| tig0024683 | three_prime_UTR | 20492 | 20803 | 20492 | ID=Msa1419200-mRNA-1:three_prime_utr;Parent=Msa1419200-mRNA-1 |
| Gene Sequence |
| Protein sequence |
