Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1245890 | XP_013457732.1 | 97.596 | 208 | 3 | 1 | 1 | 208 | 1 | 206 | 5.67e-148 | 419 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1245890 | sp|Q9FGS5|NRT31_ARATH | 51.185 | 211 | 90 | 6 | 1 | 204 | 1 | 205 | 1.58e-63 | 199 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1245890 | I3SMV0 | 97.596 | 208 | 3 | 1 | 1 | 208 | 1 | 206 | 2.71e-148 | 419 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0004180 | Msa1245890 | -0.802089 | 6.619988e-49 | -8.615850e-47 |
Msa0034540 | Msa1245890 | 0.835150 | 1.984187e-56 | -8.615850e-47 |
Msa0034590 | Msa1245890 | -0.829456 | 5.096660e-55 | -8.615850e-47 |
Msa0037040 | Msa1245890 | -0.811971 | 5.361527e-51 | -8.615850e-47 |
Msa0047630 | Msa1245890 | -0.822391 | 2.429494e-53 | -8.615850e-47 |
Msa0078110 | Msa1245890 | -0.825121 | 5.571963e-54 | -8.615850e-47 |
Msa0107830 | Msa1245890 | 0.823944 | 1.054161e-53 | -8.615850e-47 |
Msa0117650 | Msa1245890 | 0.818253 | 2.158231e-52 | -8.615850e-47 |
Msa0603310 | Msa1245890 | 0.802214 | 6.239098e-49 | -8.615850e-47 |
Msa0606340 | Msa1245890 | -0.806212 | 9.177461e-50 | -8.615850e-47 |
Msa0619030 | Msa1245890 | -0.803129 | 4.038816e-49 | -8.615850e-47 |
Msa0637590 | Msa1245890 | 0.813750 | 2.185050e-51 | -8.615850e-47 |
Msa0644340 | Msa1245890 | 0.808398 | 3.159217e-50 | -8.615850e-47 |
Msa0648840 | Msa1245890 | -0.822205 | 2.682399e-53 | -8.615850e-47 |
Msa0657260 | Msa1245890 | 0.822545 | 2.236940e-53 | -8.615850e-47 |
Msa0666950 | Msa1245890 | 0.803912 | 2.779999e-49 | -8.615850e-47 |
Msa0669350 | Msa1245890 | 0.808348 | 3.237326e-50 | -8.615850e-47 |
Msa0670170 | Msa1245890 | 0.808406 | 3.146146e-50 | -8.615850e-47 |
Msa0675590 | Msa1245890 | 0.809319 | 2.007171e-50 | -8.615850e-47 |
Msa0693050 | Msa1245890 | -0.811780 | 5.897950e-51 | -8.615850e-47 |
Msa0695250 | Msa1245890 | -0.806725 | 7.154982e-50 | -8.615850e-47 |
Msa0701490 | Msa1245890 | 0.827490 | 1.520436e-54 | -8.615850e-47 |
Msa0701560 | Msa1245890 | 0.827114 | 1.870248e-54 | -8.615850e-47 |
Msa0716620 | Msa1245890 | 0.807160 | 5.790421e-50 | -8.615850e-47 |
Msa0729740 | Msa1245890 | -0.801782 | 7.655309e-49 | -8.615850e-47 |
Msa0731580 | Msa1245890 | 0.806490 | 8.020614e-50 | -8.615850e-47 |
Msa0736560 | Msa1245890 | 0.805355 | 1.389678e-49 | -8.615850e-47 |
Msa0744550 | Msa1245890 | 0.839678 | 1.372200e-57 | -8.615850e-47 |
Msa0744560 | Msa1245890 | 0.836261 | 1.037713e-56 | -8.615850e-47 |
Msa0744710 | Msa1245890 | 0.814890 | 1.223491e-51 | -8.615850e-47 |
Msa0746340 | Msa1245890 | 0.829701 | 4.442089e-55 | -8.615850e-47 |
Msa0771810 | Msa1245890 | 0.809386 | 1.941536e-50 | -8.615850e-47 |
Msa0772350 | Msa1245890 | 0.814801 | 1.280604e-51 | -8.615850e-47 |
Msa0788490 | Msa1245890 | -0.818203 | 2.215282e-52 | -8.615850e-47 |
Msa0792490 | Msa1245890 | -0.801229 | 9.937627e-49 | -8.615850e-47 |
Msa0793270 | Msa1245890 | 0.804803 | 1.812513e-49 | -8.615850e-47 |
Msa0795320 | Msa1245890 | 0.818645 | 1.759506e-52 | -8.615850e-47 |
Msa0809920 | Msa1245890 | 0.821045 | 4.975043e-53 | -8.615850e-47 |
Msa0812050 | Msa1245890 | 0.810336 | 1.212660e-50 | -8.615850e-47 |
Msa0816390 | Msa1245890 | -0.819418 | 1.173776e-52 | -8.615850e-47 |
Msa0826240 | Msa1245890 | 0.816208 | 6.224143e-52 | -8.615850e-47 |
Msa0826360 | Msa1245890 | 0.832522 | 9.008272e-56 | -8.615850e-47 |
Msa0826370 | Msa1245890 | 0.807057 | 6.086748e-50 | -8.615850e-47 |
Msa0833980 | Msa1245890 | -0.807139 | 5.847595e-50 | -8.615850e-47 |
Msa0129290 | Msa1245890 | 0.819008 | 1.454739e-52 | -8.615850e-47 |
Msa0129770 | Msa1245890 | 0.822733 | 2.022956e-53 | -8.615850e-47 |
Msa0129820 | Msa1245890 | -0.813497 | 2.483812e-51 | -8.615850e-47 |
Msa0143640 | Msa1245890 | 0.822269 | 2.592760e-53 | -8.615850e-47 |
Msa0143830 | Msa1245890 | 0.808560 | 2.916797e-50 | -8.615850e-47 |
Msa0164350 | Msa1245890 | 0.835974 | 1.227877e-56 | -8.615850e-47 |
Msa0167160 | Msa1245890 | -0.802264 | 6.092634e-49 | -8.615850e-47 |
Msa0167570 | Msa1245890 | -0.801522 | 8.653246e-49 | -8.615850e-47 |
Msa0185040 | Msa1245890 | 0.801422 | 9.073765e-49 | -8.615850e-47 |
Msa0193950 | Msa1245890 | 0.802578 | 5.250402e-49 | -8.615850e-47 |
Msa1239190 | Msa1245890 | 0.819690 | 1.017449e-52 | -8.615850e-47 |
Msa1245890 | Msa1254870 | 0.816150 | 6.412475e-52 | -8.615850e-47 |
Msa1245890 | Msa1259030 | 0.999790 | 0.000000e+00 | -8.615850e-47 |
Msa1245890 | Msa1263500 | 0.811286 | 7.553801e-51 | -8.615850e-47 |
Msa1245890 | Msa1264940 | 0.805310 | 1.420233e-49 | -8.615850e-47 |
Msa1245890 | Msa1299480 | 0.836315 | 1.005763e-56 | -8.615850e-47 |
Msa1245890 | Msa1303150 | 0.801559 | 8.504262e-49 | -8.615850e-47 |
Msa1245890 | Msa1328430 | 0.817289 | 3.562454e-52 | -8.615850e-47 |
Msa1245890 | Msa1333700 | 0.802075 | 6.663038e-49 | -8.615850e-47 |
Msa1245890 | Msa1334000 | 0.812055 | 5.138943e-51 | -8.615850e-47 |
Msa1245890 | Msa1350130 | -0.801431 | 9.031606e-49 | -8.615850e-47 |
Msa1245890 | Msa1373930 | -0.800460 | 1.426104e-48 | -8.615850e-47 |
Msa1245890 | Msa1377050 | 0.806029 | 1.003291e-49 | -8.615850e-47 |
Msa1245890 | Msa1387610 | 0.818578 | 1.822046e-52 | -8.615850e-47 |
Msa1245890 | Msa1390200 | 0.827146 | 1.838074e-54 | -8.615850e-47 |
Msa1245890 | Msa1395200 | -0.808210 | 3.464484e-50 | -8.615850e-47 |
Msa1245890 | Msa1395250 | 0.819515 | 1.115428e-52 | -8.615850e-47 |
Msa1245890 | Msa1398120 | 0.800739 | 1.251129e-48 | -8.615850e-47 |
Msa1245890 | Msa1405500 | 0.800895 | 1.162905e-48 | -8.615850e-47 |
Msa1245890 | Msa1407040 | 0.805715 | 1.167795e-49 | -8.615850e-47 |
Msa1245890 | Msa1415510 | -0.802763 | 4.808318e-49 | -8.615850e-47 |
Msa1245890 | Msa1419200 | 0.993292 | 9.761801e-199 | -8.615850e-47 |
Msa1245890 | Msa1419210 | 0.817208 | 3.715074e-52 | -8.615850e-47 |
Msa1245890 | Msa1434860 | -0.801163 | 1.024901e-48 | -8.615850e-47 |
Msa1245890 | Msa1438160 | 0.820060 | 8.372517e-53 | -8.615850e-47 |
Msa1245890 | Msa1449470 | 0.827261 | 1.725227e-54 | -8.615850e-47 |
Msa1245890 | Msa1459920 | 0.833531 | 5.056195e-56 | -8.615850e-47 |
Msa1245890 | Msa1459930 | 0.840317 | 9.349396e-58 | -8.615850e-47 |
Msa0370360 | Msa1245890 | 0.844478 | 7.372828e-59 | -8.615850e-47 |
Msa0390200 | Msa1245890 | 0.819382 | 1.195745e-52 | -8.615850e-47 |
Msa0419150 | Msa1245890 | -0.804201 | 2.420156e-49 | -8.615850e-47 |
Msa0421080 | Msa1245890 | 0.822763 | 1.990523e-53 | -8.615850e-47 |
Msa0429840 | Msa1245890 | 0.816503 | 5.347341e-52 | -8.615850e-47 |
Msa0433090 | Msa1245890 | 0.804842 | 1.779127e-49 | -8.615850e-47 |
Msa0433890 | Msa1245890 | -0.807740 | 4.360609e-50 | -8.615850e-47 |
Msa0434460 | Msa1245890 | 0.804356 | 2.246867e-49 | -8.615850e-47 |
Msa0444770 | Msa1245890 | -0.800112 | 1.679417e-48 | -8.615850e-47 |
Msa0464980 | Msa1245890 | -0.803594 | 3.235816e-49 | -8.615850e-47 |
Msa0480540 | Msa1245890 | 0.841501 | 4.572532e-58 | -8.615850e-47 |
Msa0480550 | Msa1245890 | 0.837691 | 4.476800e-57 | -8.615850e-47 |
Msa1026890 | Msa1245890 | 0.804081 | 2.562950e-49 | -8.615850e-47 |
Msa1027910 | Msa1245890 | 0.800171 | 1.633021e-48 | -8.615850e-47 |
Msa1030210 | Msa1245890 | 0.839442 | 1.581002e-57 | -8.615850e-47 |
Msa1061840 | Msa1245890 | 0.821942 | 3.088089e-53 | -8.615850e-47 |
Msa1064240 | Msa1245890 | 0.817652 | 2.950924e-52 | -8.615850e-47 |
Msa1069250 | Msa1245890 | 0.823483 | 1.351749e-53 | -8.615850e-47 |
Msa1085820 | Msa1245890 | 0.809110 | 2.224600e-50 | -8.615850e-47 |
Msa1102210 | Msa1245890 | 0.811637 | 6.337750e-51 | -8.615850e-47 |
Msa0267900 | Msa1245890 | 0.812220 | 4.730580e-51 | -8.615850e-47 |
Msa0271700 | Msa1245890 | 0.828827 | 7.239489e-55 | -8.615850e-47 |
Msa0271720 | Msa1245890 | 0.822123 | 2.802636e-53 | -8.615850e-47 |
Msa0314240 | Msa1245890 | 0.803443 | 3.477919e-49 | -8.615850e-47 |
Msa0324810 | Msa1245890 | 0.805047 | 1.611906e-49 | -8.615850e-47 |
Msa1107510 | Msa1245890 | 0.804584 | 2.014246e-49 | -8.615850e-47 |
Msa1110900 | Msa1245890 | 0.817382 | 3.394892e-52 | -8.615850e-47 |
Msa1120580 | Msa1245890 | 0.811874 | 5.628986e-51 | -8.615850e-47 |
Msa1131120 | Msa1245890 | 0.806509 | 7.946447e-50 | -8.615850e-47 |
Msa1137750 | Msa1245890 | 0.820435 | 6.868825e-53 | -8.615850e-47 |
Msa1151070 | Msa1245890 | 0.807600 | 4.669826e-50 | -8.615850e-47 |
Msa1154240 | Msa1245890 | 0.822312 | 2.533848e-53 | -8.615850e-47 |
Msa1185270 | Msa1245890 | 0.803890 | 2.808918e-49 | -8.615850e-47 |
Msa1202110 | Msa1245890 | 0.815698 | 8.091379e-52 | -8.615850e-47 |
Msa1208840 | Msa1245890 | 0.950307 | 2.158538e-108 | -8.615850e-47 |
Msa1208920 | Msa1245890 | 0.922935 | 5.143000e-89 | -8.615850e-47 |
Msa1211610 | Msa1245890 | 0.839619 | 1.421556e-57 | -8.615850e-47 |
Msa1211930 | Msa1245890 | -0.802750 | 4.837189e-49 | -8.615850e-47 |
Msa1223560 | Msa1245890 | 0.826470 | 2.665854e-54 | -8.615850e-47 |
Msa1224510 | Msa1245890 | 0.826150 | 3.175850e-54 | -8.615850e-47 |
Msa0500910 | Msa1245890 | 0.816605 | 5.074334e-52 | -8.615850e-47 |
Msa0523980 | Msa1245890 | 0.805539 | 1.271591e-49 | -8.615850e-47 |
Msa0534610 | Msa1245890 | 0.808090 | 3.674075e-50 | -8.615850e-47 |
Msa0550980 | Msa1245890 | -0.804976 | 1.668217e-49 | -8.615850e-47 |
Msa0557440 | Msa1245890 | -0.803137 | 4.024304e-49 | -8.615850e-47 |
Msa0565120 | Msa1245890 | 0.851810 | 6.964205e-61 | -8.615850e-47 |
Msa0580840 | Msa1245890 | 0.820005 | 8.618820e-53 | -8.615850e-47 |
Msa0590810 | Msa1245890 | 0.806191 | 9.273237e-50 | -8.615850e-47 |
Msa0594250 | Msa1245890 | 0.808345 | 3.241407e-50 | -8.615850e-47 |
Msa0597370 | Msa1245890 | -0.813071 | 3.080776e-51 | -8.615850e-47 |
Msa0597820 | Msa1245890 | 0.807355 | 5.264915e-50 | -8.615850e-47 |
Msa0848020 | Msa1245890 | 0.825631 | 4.219675e-54 | -8.615850e-47 |
Msa0850480 | Msa1245890 | 0.814488 | 1.501785e-51 | -8.615850e-47 |
Msa0856080 | Msa1245890 | 0.804814 | 1.803074e-49 | -8.615850e-47 |
Msa0859040 | Msa1245890 | 0.803577 | 3.261805e-49 | -8.615850e-47 |
Msa0865810 | Msa1245890 | 0.803556 | 3.294716e-49 | -8.615850e-47 |
Msa0865820 | Msa1245890 | 0.822392 | 2.428287e-53 | -8.615850e-47 |
Msa0865830 | Msa1245890 | 0.831759 | 1.390985e-55 | -8.615850e-47 |
Msa0874750 | Msa1245890 | 0.812577 | 3.953378e-51 | -8.615850e-47 |
Msa0879940 | Msa1245890 | -0.821988 | 3.011902e-53 | -8.615850e-47 |
Msa0925940 | Msa1245890 | 0.803079 | 4.136685e-49 | -8.615850e-47 |
Msa0945160 | Msa1245890 | -0.802396 | 5.722331e-49 | -8.615850e-47 |
Msa0966580 | Msa1245890 | 0.818236 | 2.177864e-52 | -8.615850e-47 |
Msa0976400 | Msa1245890 | 0.806443 | 8.206878e-50 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1245890 | MtrunA17_Chr4g0058311 | 97.596 | 208 | 3 | 1 | 1 | 208 | 1 | 206 | 5.22e-152 | 419 |
Msa1245890 | MtrunA17_Chr4g0058331 | 97.115 | 208 | 4 | 1 | 1 | 208 | 1 | 206 | 7.41e-152 | 419 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1245890 | AT5G50200.1 | 51.185 | 211 | 90 | 6 | 1 | 204 | 1 | 205 | 1.60e-64 | 199 |
Msa1245890 | AT5G50200.3 | 51.185 | 211 | 90 | 6 | 1 | 204 | 1 | 205 | 1.60e-64 | 199 |
Msa1245890 | AT5G50200.2 | 51.185 | 211 | 90 | 6 | 1 | 204 | 1 | 205 | 1.60e-64 | 199 |
Msa1245890 | AT4G24715.1 | 50.239 | 209 | 94 | 6 | 1 | 204 | 23 | 226 | 2.80e-63 | 196 |
Find 64 sgRNAs with CRISPR-Local
Find 201 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GTAGCACAACTTCAGCTTTA+TGG | 0.134503 | 8_2:+36151018 | None:intergenic |
AAAATTTATGTCATAGAAAT+AGG | 0.214599 | 8_2:-36150398 | Msa1245890:three_prime_UTR |
ATCTACGCAGTTCTGTTATC+TGG | 0.302271 | 8_2:-36151112 | Msa1245890:intron |
CTATAGCTCCTATGACTATA+TGG | 0.312141 | 8_2:-36150468 | Msa1245890:three_prime_UTR |
ACTTACCTTGTCCCTGCTTA+GGG | 0.312527 | 8_2:+36151665 | None:intergenic |
TTATGCCTTATATATGTTGT+AGG | 0.313435 | 8_2:-36150554 | Msa1245890:three_prime_UTR |
AGAGAAAAGCCAATTGGAAT+TGG | 0.326415 | 8_2:+36151841 | None:intergenic |
TACTTACCTTGTCCCTGCTT+AGG | 0.355450 | 8_2:+36151664 | None:intergenic |
TGTTTAGCTGAACTTTGTTA+TGG | 0.379387 | 8_2:-36151736 | Msa1245890:CDS |
ACTGAATTCAATTACTGCTT+TGG | 0.387524 | 8_2:+36150617 | None:intergenic |
CCAGGCCTACAACATATATA+AGG | 0.400830 | 8_2:+36150549 | None:intergenic |
AACGATAAGGAAGTGGCTTA+TGG | 0.411170 | 8_2:-36150803 | Msa1245890:CDS |
TAGGGGAAGCTGTGACTTCA+AGG | 0.413086 | 8_2:+36151683 | None:intergenic |
TGCATTTGATTCCAACGATA+AGG | 0.421816 | 8_2:-36150816 | Msa1245890:CDS |
AATATCATTCCAATTCCAAT+TGG | 0.435193 | 8_2:-36151850 | Msa1245890:five_prime_UTR |
CAGTGACATAGGAAACTTCA+TGG | 0.450404 | 8_2:-36150598 | Msa1245890:three_prime_UTR |
AGTGAAAACCATATAGTCAT+AGG | 0.457048 | 8_2:+36150460 | None:intergenic |
GCTTTCTCAGTTGTGTCCCT+AGG | 0.459425 | 8_2:-36150677 | Msa1245890:CDS |
AGTCACAGCTTCCCCTAAGC+AGG | 0.463378 | 8_2:-36151677 | Msa1245890:CDS |
CCTTATATATGTTGTAGGCC+TGG | 0.464256 | 8_2:-36150549 | Msa1245890:three_prime_UTR |
GGTACTCTTACCCGCGTTCG+TGG | 0.464298 | 8_2:+36150775 | None:intergenic |
GACTTCAGAGAAAAGCCAAT+TGG | 0.464343 | 8_2:+36151835 | None:intergenic |
AAAGAAAAGTCAACTGTGAA+AGG | 0.477653 | 8_2:+36151807 | None:intergenic |
AGCTGAACTTTGTTATGGAA+AGG | 0.496120 | 8_2:-36151731 | Msa1245890:CDS |
ATAAGCCACTTCCTTATCGT+TGG | 0.499427 | 8_2:+36150805 | None:intergenic |
GTAATTGAATTCAGTGACAT+AGG | 0.512101 | 8_2:-36150609 | Msa1245890:exon |
AGACCGAGGATGAACTCTCT+AGG | 0.513840 | 8_2:-36150961 | Msa1245890:CDS |
TATGATGAGTCTGTTCCAGC+TGG | 0.517572 | 8_2:+36151046 | None:intergenic |
ATGTCATAGAAATAGGAGTC+AGG | 0.520060 | 8_2:-36150391 | Msa1245890:three_prime_UTR |
TGATTCCAACGATAAGGAAG+TGG | 0.521314 | 8_2:-36150810 | Msa1245890:CDS |
CTAAACAAGACCTTCCCAGC+TGG | 0.523958 | 8_2:-36151061 | Msa1245890:CDS |
GTTGGAAGCATTGTAGGGCA+TGG | 0.526614 | 8_2:+36150910 | None:intergenic |
AAGAAAAGTCAACTGTGAAA+GGG | 0.535727 | 8_2:+36151808 | None:intergenic |
TGAGTCTGTTCCAGCTGGGA+AGG | 0.539300 | 8_2:+36151051 | None:intergenic |
TGCGTTGATCTCAAACAAGT+TGG | 0.539862 | 8_2:+36150748 | None:intergenic |
CTACAATGCTTCCAACAAAA+CGG | 0.541838 | 8_2:-36150903 | Msa1245890:CDS |
GTCCCTAGAGAGTTCATCCT+CGG | 0.558273 | 8_2:+36150958 | None:intergenic |
TAGACAAAATCAGTGGAACA+TGG | 0.559795 | 8_2:-36151087 | Msa1245890:CDS |
GACCGAGGATGAACTCTCTA+GGG | 0.561011 | 8_2:-36150960 | Msa1245890:CDS |
AGGGGAAGCTGTGACTTCAA+GGG | 0.577454 | 8_2:+36151684 | None:intergenic |
CTTACCTTGTCCCTGCTTAG+GGG | 0.578473 | 8_2:+36151666 | None:intergenic |
GATCTCAAACAAGTTGGTAG+TGG | 0.584307 | 8_2:+36150754 | None:intergenic |
ACTGATAATATTATTTAACC+AGG | 0.587057 | 8_2:+36150531 | None:intergenic |
CAATATAGAAGAACACACCT+AGG | 0.601286 | 8_2:+36150660 | None:intergenic |
TTTGAGATCAACGCAATCAG+TGG | 0.604199 | 8_2:-36150740 | Msa1245890:CDS |
AGACAAAATCAGTGGAACAT+GGG | 0.618150 | 8_2:-36151086 | Msa1245890:CDS |
ATCGTTGGAATCAAATGCAT+AGG | 0.623735 | 8_2:+36150820 | None:intergenic |
GTCACAGCTTCCCCTAAGCA+GGG | 0.629784 | 8_2:-36151676 | Msa1245890:CDS |
TATGGCCAAACCACGAACGC+GGG | 0.634750 | 8_2:-36150785 | Msa1245890:CDS |
TTATGGCCAAACCACGAACG+CGG | 0.634987 | 8_2:-36150786 | Msa1245890:CDS |
GCTTCCCCTAAGCAGGGACA+AGG | 0.636634 | 8_2:-36151670 | Msa1245890:intron |
GCGCTGAATCAACCACTCGA+AGG | 0.649799 | 8_2:+36150874 | None:intergenic |
CCTCGGTCTTTCTCCAAGCG+CGG | 0.651070 | 8_2:+36150975 | None:intergenic |
AATATAGAAGAACACACCTA+GGG | 0.653049 | 8_2:+36150661 | None:intergenic |
TATGGCAGCACACAAGCTTG+TGG | 0.654698 | 8_2:-36151779 | Msa1245890:CDS |
TCTGGAGTAGACAAAATCAG+TGG | 0.660740 | 8_2:-36151094 | Msa1245890:CDS |
TGAGAAAGCACTGAAGACAA+CGG | 0.661115 | 8_2:+36150691 | None:intergenic |
AAACGGTTCAAACCTTCGAG+TGG | 0.663100 | 8_2:-36150886 | Msa1245890:CDS |
CGTACAAAGTACGTTGCCTG+AGG | 0.678441 | 8_2:+36150845 | None:intergenic |
AGCAGATATCAAGAGTCGCG+TGG | 0.681698 | 8_2:+36150714 | None:intergenic |
ATGATGAGTCTGTTCCAGCT+GGG | 0.682275 | 8_2:+36151047 | None:intergenic |
AGATATCAAGAGTCGCGTGG+CGG | 0.700580 | 8_2:+36150717 | None:intergenic |
CCGCGCTTGGAGAAAGACCG+AGG | 0.703551 | 8_2:-36150975 | Msa1245890:CDS |
AAAGCTGAAGTTGTGCTACG+CGG | 0.733243 | 8_2:-36151014 | Msa1245890:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | GATAAGACATTTATTTATTA+AGG | + | chr8_2:36150960-36150979 | None:intergenic | 15.0% |
!! | AAAATTTATGTCATAGAAAT+AGG | - | chr8_2:36151784-36151803 | Msa1245890:exon | 15.0% |
!! | GATAAGACATTTATTTATTA+AGG | + | chr8_2:36150960-36150979 | None:intergenic | 15.0% |
!! | AAAATTTATGTCATAGAAAT+AGG | - | chr8_2:36151784-36151803 | Msa1245890:exon | 15.0% |
!! | TTATTCAAATTCAAGAAAAG+AGG | + | chr8_2:36150754-36150773 | None:intergenic | 20.0% |
!!! | GAACATTTTTCAAGAAAATT+TGG | - | chr8_2:36150790-36150809 | Msa1245890:CDS | 20.0% |
!! | TGTTCTTCTATATTGAAAAA+AGG | - | chr8_2:36151530-36151549 | Msa1245890:intron | 20.0% |
!! | TTCTATATTGAAAAAAGGAA+GGG | - | chr8_2:36151535-36151554 | Msa1245890:intron | 20.0% |
!! | ACTGATAATATTATTTAACC+AGG | + | chr8_2:36151654-36151673 | None:intergenic | 20.0% |
!! | CATGAAATATGAAAAACTTA+GGG | + | chr8_2:36151688-36151707 | None:intergenic | 20.0% |
!!! | ATATTATTCTGAAAAGAATC+TGG | + | chr8_2:36150317-36150336 | None:intergenic | 20.0% |
!! | TTATTCAAATTCAAGAAAAG+AGG | + | chr8_2:36150754-36150773 | None:intergenic | 20.0% |
!!! | GAACATTTTTCAAGAAAATT+TGG | - | chr8_2:36150790-36150809 | Msa1245890:CDS | 20.0% |
!! | TGTTCTTCTATATTGAAAAA+AGG | - | chr8_2:36151530-36151549 | Msa1245890:intron | 20.0% |
!! | TTCTATATTGAAAAAAGGAA+GGG | - | chr8_2:36151535-36151554 | Msa1245890:intron | 20.0% |
!! | ACTGATAATATTATTTAACC+AGG | + | chr8_2:36151654-36151673 | None:intergenic | 20.0% |
!! | CATGAAATATGAAAAACTTA+GGG | + | chr8_2:36151688-36151707 | None:intergenic | 20.0% |
! | AATATCATTCCAATTCCAAT+TGG | - | chr8_2:36150332-36150351 | Msa1245890:three_prime_UTR | 25.0% |
!!! | TTGACTTTTCTTTAGAACTA+TGG | - | chr8_2:36150385-36150404 | Msa1245890:three_prime_UTR | 25.0% |
! | ATAATCACATAAATCAAGGT+TGG | + | chr8_2:36150724-36150743 | None:intergenic | 25.0% |
! | GAACATAATCACATAAATCA+AGG | + | chr8_2:36150728-36150747 | None:intergenic | 25.0% |
! | TTCTTGAAAAATGTTCATAC+TGG | + | chr8_2:36150786-36150805 | None:intergenic | 25.0% |
! | CTTAATAAATAGTAACACAC+CGG | + | chr8_2:36150832-36150851 | None:intergenic | 25.0% |
! | TACATTACAAATGATCACAA+AGG | - | chr8_2:36150884-36150903 | Msa1245890:CDS | 25.0% |
! | CAAGTATGCAATCATAATAT+AGG | + | chr8_2:36150982-36151001 | None:intergenic | 25.0% |
!! | AAGCTGATTAAACTCAATTT+TGG | - | chr8_2:36151039-36151058 | Msa1245890:CDS | 25.0% |
! | CTTCTATATTGAAAAAAGGA+AGG | - | chr8_2:36151534-36151553 | Msa1245890:intron | 25.0% |
! | TTATGCCTTATATATGTTGT+AGG | - | chr8_2:36151628-36151647 | Msa1245890:intron | 25.0% |
! | CCATGAAATATGAAAAACTT+AGG | + | chr8_2:36151689-36151708 | None:intergenic | 25.0% |
!! | CCTAAGTTTTTCATATTTCA+TGG | - | chr8_2:36151686-36151705 | Msa1245890:CDS | 25.0% |
!! | AGTTTTTCATATTTCATGGA+TGG | - | chr8_2:36151690-36151709 | Msa1245890:CDS | 25.0% |
! | AATATCATTCCAATTCCAAT+TGG | - | chr8_2:36150332-36150351 | Msa1245890:three_prime_UTR | 25.0% |
!!! | TTGACTTTTCTTTAGAACTA+TGG | - | chr8_2:36150385-36150404 | Msa1245890:three_prime_UTR | 25.0% |
! | ATAATCACATAAATCAAGGT+TGG | + | chr8_2:36150724-36150743 | None:intergenic | 25.0% |
! | GAACATAATCACATAAATCA+AGG | + | chr8_2:36150728-36150747 | None:intergenic | 25.0% |
! | TTCTTGAAAAATGTTCATAC+TGG | + | chr8_2:36150786-36150805 | None:intergenic | 25.0% |
! | CTTAATAAATAGTAACACAC+CGG | + | chr8_2:36150832-36150851 | None:intergenic | 25.0% |
! | TACATTACAAATGATCACAA+AGG | - | chr8_2:36150884-36150903 | Msa1245890:CDS | 25.0% |
! | CAAGTATGCAATCATAATAT+AGG | + | chr8_2:36150982-36151001 | None:intergenic | 25.0% |
!! | AAGCTGATTAAACTCAATTT+TGG | - | chr8_2:36151039-36151058 | Msa1245890:CDS | 25.0% |
! | CTTCTATATTGAAAAAAGGA+AGG | - | chr8_2:36151534-36151553 | Msa1245890:intron | 25.0% |
! | TTATGCCTTATATATGTTGT+AGG | - | chr8_2:36151628-36151647 | Msa1245890:intron | 25.0% |
! | CCATGAAATATGAAAAACTT+AGG | + | chr8_2:36151689-36151708 | None:intergenic | 25.0% |
!! | CCTAAGTTTTTCATATTTCA+TGG | - | chr8_2:36151686-36151705 | Msa1245890:CDS | 25.0% |
!! | AGTTTTTCATATTTCATGGA+TGG | - | chr8_2:36151690-36151709 | Msa1245890:CDS | 25.0% |
AAGAAAAGTCAACTGTGAAA+GGG | + | chr8_2:36150377-36150396 | None:intergenic | 30.0% | |
AAAGAAAAGTCAACTGTGAA+AGG | + | chr8_2:36150378-36150397 | None:intergenic | 30.0% | |
TGTTTAGCTGAACTTTGTTA+TGG | - | chr8_2:36150446-36150465 | Msa1245890:three_prime_UTR | 30.0% | |
TCAAATTCAAGAAAAGAGGA+AGG | + | chr8_2:36150750-36150769 | None:intergenic | 30.0% | |
!!! | TTTTTCAAGAAAATTTGGCC+AGG | - | chr8_2:36150795-36150814 | Msa1245890:CDS | 30.0% |
! | CGGTGTGTTACTATTTATTA+AGG | - | chr8_2:36150830-36150849 | Msa1245890:CDS | 30.0% |
ATTGAGTTTAATCAGCTTGA+AGG | + | chr8_2:36151037-36151056 | None:intergenic | 30.0% | |
AATATAGAAGAACACACCTA+GGG | + | chr8_2:36151524-36151543 | None:intergenic | 30.0% | |
ACTGAATTCAATTACTGCTT+TGG | + | chr8_2:36151568-36151587 | None:intergenic | 30.0% | |
GTAATTGAATTCAGTGACAT+AGG | - | chr8_2:36151573-36151592 | Msa1245890:intron | 30.0% | |
AGTGAAAACCATATAGTCAT+AGG | + | chr8_2:36151725-36151744 | None:intergenic | 30.0% | |
AAGAAAAGTCAACTGTGAAA+GGG | + | chr8_2:36150377-36150396 | None:intergenic | 30.0% | |
AAAGAAAAGTCAACTGTGAA+AGG | + | chr8_2:36150378-36150397 | None:intergenic | 30.0% | |
TGTTTAGCTGAACTTTGTTA+TGG | - | chr8_2:36150446-36150465 | Msa1245890:three_prime_UTR | 30.0% | |
TCAAATTCAAGAAAAGAGGA+AGG | + | chr8_2:36150750-36150769 | None:intergenic | 30.0% | |
!!! | TTTTTCAAGAAAATTTGGCC+AGG | - | chr8_2:36150795-36150814 | Msa1245890:CDS | 30.0% |
! | CGGTGTGTTACTATTTATTA+AGG | - | chr8_2:36150830-36150849 | Msa1245890:CDS | 30.0% |
ATTGAGTTTAATCAGCTTGA+AGG | + | chr8_2:36151037-36151056 | None:intergenic | 30.0% | |
AATATAGAAGAACACACCTA+GGG | + | chr8_2:36151524-36151543 | None:intergenic | 30.0% | |
ACTGAATTCAATTACTGCTT+TGG | + | chr8_2:36151568-36151587 | None:intergenic | 30.0% | |
GTAATTGAATTCAGTGACAT+AGG | - | chr8_2:36151573-36151592 | Msa1245890:intron | 30.0% | |
AGTGAAAACCATATAGTCAT+AGG | + | chr8_2:36151725-36151744 | None:intergenic | 30.0% | |
AGAGAAAAGCCAATTGGAAT+TGG | + | chr8_2:36150344-36150363 | None:intergenic | 35.0% | |
! | AGCTGAACTTTGTTATGGAA+AGG | - | chr8_2:36150451-36150470 | Msa1245890:three_prime_UTR | 35.0% |
GAAAATTTGGCCAGGTTTAA+TGG | - | chr8_2:36150803-36150822 | Msa1245890:CDS | 35.0% | |
AAAAATTGCAACGCAACTTG+CGG | + | chr8_2:36150864-36150883 | None:intergenic | 35.0% | |
TAGACAAAATCAGTGGAACA+TGG | - | chr8_2:36151095-36151114 | Msa1245890:CDS | 35.0% | |
AGACAAAATCAGTGGAACAT+GGG | - | chr8_2:36151096-36151115 | Msa1245890:CDS | 35.0% | |
!!! | GTTTTGTTGGAAGCATTGTA+GGG | + | chr8_2:36151280-36151299 | None:intergenic | 35.0% |
CTACAATGCTTCCAACAAAA+CGG | - | chr8_2:36151279-36151298 | Msa1245890:intron | 35.0% | |
ATCGTTGGAATCAAATGCAT+AGG | + | chr8_2:36151365-36151384 | None:intergenic | 35.0% | |
TGCATTTGATTCCAACGATA+AGG | - | chr8_2:36151366-36151385 | Msa1245890:intron | 35.0% | |
CAATATAGAAGAACACACCT+AGG | + | chr8_2:36151525-36151544 | None:intergenic | 35.0% | |
CTATAGCTCCTATGACTATA+TGG | - | chr8_2:36151714-36151733 | Msa1245890:CDS | 35.0% | |
! | ACTATATGGTTTTCACTCAC+TGG | - | chr8_2:36151728-36151747 | Msa1245890:CDS | 35.0% |
ATGTCATAGAAATAGGAGTC+AGG | - | chr8_2:36151791-36151810 | Msa1245890:exon | 35.0% | |
AGAGAAAAGCCAATTGGAAT+TGG | + | chr8_2:36150344-36150363 | None:intergenic | 35.0% | |
! | AGCTGAACTTTGTTATGGAA+AGG | - | chr8_2:36150451-36150470 | Msa1245890:three_prime_UTR | 35.0% |
GAAAATTTGGCCAGGTTTAA+TGG | - | chr8_2:36150803-36150822 | Msa1245890:CDS | 35.0% | |
AAAAATTGCAACGCAACTTG+CGG | + | chr8_2:36150864-36150883 | None:intergenic | 35.0% | |
TAGACAAAATCAGTGGAACA+TGG | - | chr8_2:36151095-36151114 | Msa1245890:CDS | 35.0% | |
AGACAAAATCAGTGGAACAT+GGG | - | chr8_2:36151096-36151115 | Msa1245890:CDS | 35.0% | |
!!! | GTTTTGTTGGAAGCATTGTA+GGG | + | chr8_2:36151280-36151299 | None:intergenic | 35.0% |
CTACAATGCTTCCAACAAAA+CGG | - | chr8_2:36151279-36151298 | Msa1245890:intron | 35.0% | |
ATCGTTGGAATCAAATGCAT+AGG | + | chr8_2:36151365-36151384 | None:intergenic | 35.0% | |
TGCATTTGATTCCAACGATA+AGG | - | chr8_2:36151366-36151385 | Msa1245890:intron | 35.0% | |
CAATATAGAAGAACACACCT+AGG | + | chr8_2:36151525-36151544 | None:intergenic | 35.0% | |
CTATAGCTCCTATGACTATA+TGG | - | chr8_2:36151714-36151733 | Msa1245890:CDS | 35.0% | |
! | ACTATATGGTTTTCACTCAC+TGG | - | chr8_2:36151728-36151747 | Msa1245890:CDS | 35.0% |
ATGTCATAGAAATAGGAGTC+AGG | - | chr8_2:36151791-36151810 | Msa1245890:exon | 35.0% | |
GACTTCAGAGAAAAGCCAAT+TGG | + | chr8_2:36150350-36150369 | None:intergenic | 40.0% | |
ATCTACGCAGTTCTGTTATC+TGG | - | chr8_2:36151070-36151089 | Msa1245890:CDS | 40.0% | |
! | TCTGGAGTAGACAAAATCAG+TGG | - | chr8_2:36151088-36151107 | Msa1245890:CDS | 40.0% |
GTAGCACAACTTCAGCTTTA+TGG | + | chr8_2:36151167-36151186 | None:intergenic | 40.0% | |
! | GCATGGCTAACATTTTGTGT+TGG | + | chr8_2:36151258-36151277 | None:intergenic | 40.0% |
!!! | CGTTTTGTTGGAAGCATTGT+AGG | + | chr8_2:36151281-36151300 | None:intergenic | 40.0% |
! | GAAGGTTTGAACCGTTTTGT+TGG | + | chr8_2:36151293-36151312 | None:intergenic | 40.0% |
TGATTCCAACGATAAGGAAG+TGG | - | chr8_2:36151372-36151391 | Msa1245890:intron | 40.0% | |
ATAAGCCACTTCCTTATCGT+TGG | + | chr8_2:36151380-36151399 | None:intergenic | 40.0% | |
AACGATAAGGAAGTGGCTTA+TGG | - | chr8_2:36151379-36151398 | Msa1245890:intron | 40.0% | |
!! | GATCTCAAACAAGTTGGTAG+TGG | + | chr8_2:36151431-36151450 | None:intergenic | 40.0% |
! | TGCGTTGATCTCAAACAAGT+TGG | + | chr8_2:36151437-36151456 | None:intergenic | 40.0% |
! | TTTGAGATCAACGCAATCAG+TGG | - | chr8_2:36151442-36151461 | Msa1245890:intron | 40.0% |
!! | TGAGAAAGCACTGAAGACAA+CGG | + | chr8_2:36151494-36151513 | None:intergenic | 40.0% |
CAGTGACATAGGAAACTTCA+TGG | - | chr8_2:36151584-36151603 | Msa1245890:intron | 40.0% | |
CCAGGCCTACAACATATATA+AGG | + | chr8_2:36151636-36151655 | None:intergenic | 40.0% | |
CCTTATATATGTTGTAGGCC+TGG | - | chr8_2:36151633-36151652 | Msa1245890:intron | 40.0% | |
GACTTCAGAGAAAAGCCAAT+TGG | + | chr8_2:36150350-36150369 | None:intergenic | 40.0% | |
ATCTACGCAGTTCTGTTATC+TGG | - | chr8_2:36151070-36151089 | Msa1245890:CDS | 40.0% | |
! | TCTGGAGTAGACAAAATCAG+TGG | - | chr8_2:36151088-36151107 | Msa1245890:CDS | 40.0% |
GTAGCACAACTTCAGCTTTA+TGG | + | chr8_2:36151167-36151186 | None:intergenic | 40.0% | |
! | GCATGGCTAACATTTTGTGT+TGG | + | chr8_2:36151258-36151277 | None:intergenic | 40.0% |
!!! | CGTTTTGTTGGAAGCATTGT+AGG | + | chr8_2:36151281-36151300 | None:intergenic | 40.0% |
! | GAAGGTTTGAACCGTTTTGT+TGG | + | chr8_2:36151293-36151312 | None:intergenic | 40.0% |
TGATTCCAACGATAAGGAAG+TGG | - | chr8_2:36151372-36151391 | Msa1245890:intron | 40.0% | |
ATAAGCCACTTCCTTATCGT+TGG | + | chr8_2:36151380-36151399 | None:intergenic | 40.0% | |
AACGATAAGGAAGTGGCTTA+TGG | - | chr8_2:36151379-36151398 | Msa1245890:intron | 40.0% | |
!! | GATCTCAAACAAGTTGGTAG+TGG | + | chr8_2:36151431-36151450 | None:intergenic | 40.0% |
! | TGCGTTGATCTCAAACAAGT+TGG | + | chr8_2:36151437-36151456 | None:intergenic | 40.0% |
! | TTTGAGATCAACGCAATCAG+TGG | - | chr8_2:36151442-36151461 | Msa1245890:intron | 40.0% |
!! | TGAGAAAGCACTGAAGACAA+CGG | + | chr8_2:36151494-36151513 | None:intergenic | 40.0% |
CAGTGACATAGGAAACTTCA+TGG | - | chr8_2:36151584-36151603 | Msa1245890:intron | 40.0% | |
CCAGGCCTACAACATATATA+AGG | + | chr8_2:36151636-36151655 | None:intergenic | 40.0% | |
CCTTATATATGTTGTAGGCC+TGG | - | chr8_2:36151633-36151652 | Msa1245890:intron | 40.0% | |
ACTTACCTTGTCCCTGCTTA+GGG | + | chr8_2:36150520-36150539 | None:intergenic | 45.0% | |
TACTTACCTTGTCCCTGCTT+AGG | + | chr8_2:36150521-36150540 | None:intergenic | 45.0% | |
ATGATGAGTCTGTTCCAGCT+GGG | + | chr8_2:36151138-36151157 | None:intergenic | 45.0% | |
TATGATGAGTCTGTTCCAGC+TGG | + | chr8_2:36151139-36151158 | None:intergenic | 45.0% | |
AAAGCTGAAGTTGTGCTACG+CGG | - | chr8_2:36151168-36151187 | Msa1245890:intron | 45.0% | |
AAACGGTTCAAACCTTCGAG+TGG | - | chr8_2:36151296-36151315 | Msa1245890:intron | 45.0% | |
ACTTACCTTGTCCCTGCTTA+GGG | + | chr8_2:36150520-36150539 | None:intergenic | 45.0% | |
TACTTACCTTGTCCCTGCTT+AGG | + | chr8_2:36150521-36150540 | None:intergenic | 45.0% | |
ATGATGAGTCTGTTCCAGCT+GGG | + | chr8_2:36151138-36151157 | None:intergenic | 45.0% | |
TATGATGAGTCTGTTCCAGC+TGG | + | chr8_2:36151139-36151158 | None:intergenic | 45.0% | |
AAAGCTGAAGTTGTGCTACG+CGG | - | chr8_2:36151168-36151187 | Msa1245890:intron | 45.0% | |
AAACGGTTCAAACCTTCGAG+TGG | - | chr8_2:36151296-36151315 | Msa1245890:intron | 45.0% | |
TATGGCAGCACACAAGCTTG+TGG | - | chr8_2:36150403-36150422 | Msa1245890:three_prime_UTR | 50.0% | |
AGGGGAAGCTGTGACTTCAA+GGG | + | chr8_2:36150501-36150520 | None:intergenic | 50.0% | |
TAGGGGAAGCTGTGACTTCA+AGG | + | chr8_2:36150502-36150521 | None:intergenic | 50.0% | |
CTTACCTTGTCCCTGCTTAG+GGG | + | chr8_2:36150519-36150538 | None:intergenic | 50.0% | |
TGGCCAGGTTTAATGGAGTC+CGG | - | chr8_2:36150810-36150829 | Msa1245890:CDS | 50.0% | |
ACACCGGACTCCATTAAACC+TGG | + | chr8_2:36150816-36150835 | None:intergenic | 50.0% | |
CTAAACAAGACCTTCCCAGC+TGG | - | chr8_2:36151121-36151140 | Msa1245890:intron | 50.0% | |
!!! | AGCGCGGTCTTTTTGGCTTA+TGG | + | chr8_2:36151194-36151213 | None:intergenic | 50.0% |
TAAGCCAAAAAGACCGCGCT+TGG | - | chr8_2:36151194-36151213 | Msa1245890:intron | 50.0% | |
! | TTCTCCAAGCGCGGTCTTTT+TGG | + | chr8_2:36151201-36151220 | None:intergenic | 50.0% |
AGACCGAGGATGAACTCTCT+AGG | - | chr8_2:36151221-36151240 | Msa1245890:intron | 50.0% | |
GACCGAGGATGAACTCTCTA+GGG | - | chr8_2:36151222-36151241 | Msa1245890:intron | 50.0% | |
GTCCCTAGAGAGTTCATCCT+CGG | + | chr8_2:36151227-36151246 | None:intergenic | 50.0% | |
!! | GTTGGAAGCATTGTAGGGCA+TGG | + | chr8_2:36151275-36151294 | None:intergenic | 50.0% |
CGTACAAAGTACGTTGCCTG+AGG | + | chr8_2:36151340-36151359 | None:intergenic | 50.0% | |
TTATGGCCAAACCACGAACG+CGG | - | chr8_2:36151396-36151415 | Msa1245890:intron | 50.0% | |
AGATATCAAGAGTCGCGTGG+CGG | + | chr8_2:36151468-36151487 | None:intergenic | 50.0% | |
AGCAGATATCAAGAGTCGCG+TGG | + | chr8_2:36151471-36151490 | None:intergenic | 50.0% | |
GCTTTCTCAGTTGTGTCCCT+AGG | - | chr8_2:36151505-36151524 | Msa1245890:intron | 50.0% | |
TATGGCAGCACACAAGCTTG+TGG | - | chr8_2:36150403-36150422 | Msa1245890:three_prime_UTR | 50.0% | |
AGGGGAAGCTGTGACTTCAA+GGG | + | chr8_2:36150501-36150520 | None:intergenic | 50.0% | |
TAGGGGAAGCTGTGACTTCA+AGG | + | chr8_2:36150502-36150521 | None:intergenic | 50.0% | |
CTTACCTTGTCCCTGCTTAG+GGG | + | chr8_2:36150519-36150538 | None:intergenic | 50.0% | |
TGGCCAGGTTTAATGGAGTC+CGG | - | chr8_2:36150810-36150829 | Msa1245890:CDS | 50.0% | |
ACACCGGACTCCATTAAACC+TGG | + | chr8_2:36150816-36150835 | None:intergenic | 50.0% | |
CTAAACAAGACCTTCCCAGC+TGG | - | chr8_2:36151121-36151140 | Msa1245890:intron | 50.0% | |
!!! | AGCGCGGTCTTTTTGGCTTA+TGG | + | chr8_2:36151194-36151213 | None:intergenic | 50.0% |
TAAGCCAAAAAGACCGCGCT+TGG | - | chr8_2:36151194-36151213 | Msa1245890:intron | 50.0% | |
! | TTCTCCAAGCGCGGTCTTTT+TGG | + | chr8_2:36151201-36151220 | None:intergenic | 50.0% |
AGACCGAGGATGAACTCTCT+AGG | - | chr8_2:36151221-36151240 | Msa1245890:intron | 50.0% | |
GACCGAGGATGAACTCTCTA+GGG | - | chr8_2:36151222-36151241 | Msa1245890:intron | 50.0% | |
GTCCCTAGAGAGTTCATCCT+CGG | + | chr8_2:36151227-36151246 | None:intergenic | 50.0% | |
!! | GTTGGAAGCATTGTAGGGCA+TGG | + | chr8_2:36151275-36151294 | None:intergenic | 50.0% |
CGTACAAAGTACGTTGCCTG+AGG | + | chr8_2:36151340-36151359 | None:intergenic | 50.0% | |
TTATGGCCAAACCACGAACG+CGG | - | chr8_2:36151396-36151415 | Msa1245890:intron | 50.0% | |
AGATATCAAGAGTCGCGTGG+CGG | + | chr8_2:36151468-36151487 | None:intergenic | 50.0% | |
AGCAGATATCAAGAGTCGCG+TGG | + | chr8_2:36151471-36151490 | None:intergenic | 50.0% | |
GCTTTCTCAGTTGTGTCCCT+AGG | - | chr8_2:36151505-36151524 | Msa1245890:intron | 50.0% | |
AGTCACAGCTTCCCCTAAGC+AGG | - | chr8_2:36150505-36150524 | Msa1245890:three_prime_UTR | 55.0% | |
GTCACAGCTTCCCCTAAGCA+GGG | - | chr8_2:36150506-36150525 | Msa1245890:three_prime_UTR | 55.0% | |
TGAGTCTGTTCCAGCTGGGA+AGG | + | chr8_2:36151134-36151153 | None:intergenic | 55.0% | |
GCGCTGAATCAACCACTCGA+AGG | + | chr8_2:36151311-36151330 | None:intergenic | 55.0% | |
TATGGCCAAACCACGAACGC+GGG | - | chr8_2:36151397-36151416 | Msa1245890:intron | 55.0% | |
TCTTACCCGCGTTCGTGGTT+TGG | + | chr8_2:36151405-36151424 | None:intergenic | 55.0% | |
AGTCACAGCTTCCCCTAAGC+AGG | - | chr8_2:36150505-36150524 | Msa1245890:three_prime_UTR | 55.0% | |
GTCACAGCTTCCCCTAAGCA+GGG | - | chr8_2:36150506-36150525 | Msa1245890:three_prime_UTR | 55.0% | |
TGAGTCTGTTCCAGCTGGGA+AGG | + | chr8_2:36151134-36151153 | None:intergenic | 55.0% | |
GCGCTGAATCAACCACTCGA+AGG | + | chr8_2:36151311-36151330 | None:intergenic | 55.0% | |
TATGGCCAAACCACGAACGC+GGG | - | chr8_2:36151397-36151416 | Msa1245890:intron | 55.0% | |
TCTTACCCGCGTTCGTGGTT+TGG | + | chr8_2:36151405-36151424 | None:intergenic | 55.0% | |
GCTTCCCCTAAGCAGGGACA+AGG | - | chr8_2:36150512-36150531 | Msa1245890:three_prime_UTR | 60.0% | |
CCTCGGTCTTTCTCCAAGCG+CGG | + | chr8_2:36151210-36151229 | None:intergenic | 60.0% | |
GGTACTCTTACCCGCGTTCG+TGG | + | chr8_2:36151410-36151429 | None:intergenic | 60.0% | |
GCTTCCCCTAAGCAGGGACA+AGG | - | chr8_2:36150512-36150531 | Msa1245890:three_prime_UTR | 60.0% | |
CCTCGGTCTTTCTCCAAGCG+CGG | + | chr8_2:36151210-36151229 | None:intergenic | 60.0% | |
GGTACTCTTACCCGCGTTCG+TGG | + | chr8_2:36151410-36151429 | None:intergenic | 60.0% | |
CCGCGCTTGGAGAAAGACCG+AGG | - | chr8_2:36151207-36151226 | Msa1245890:intron | 65.0% | |
GATTCAGCGCGACGTGCCTC+AGG | - | chr8_2:36151321-36151340 | Msa1245890:intron | 65.0% | |
CCGCGCTTGGAGAAAGACCG+AGG | - | chr8_2:36151207-36151226 | Msa1245890:intron | 65.0% | |
GATTCAGCGCGACGTGCCTC+AGG | - | chr8_2:36151321-36151340 | Msa1245890:intron | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8_2 | gene | 36150316 | 36151888 | 36150316 | ID=Msa1245890;Name=Msa1245890 |
chr8_2 | mRNA | 36150316 | 36151888 | 36150316 | ID=Msa1245890-mRNA-1;Parent=Msa1245890;Name=Msa1245890-mRNA-1;_AED=0.00;_eAED=0.00;_QI=88|1|1|1|1|1|2|312|208 |
chr8_2 | exon | 36150316 | 36151124 | 36150316 | ID=Msa1245890-mRNA-1:exon:11528;Parent=Msa1245890-mRNA-1 |
chr8_2 | exon | 36151671 | 36151888 | 36151671 | ID=Msa1245890-mRNA-1:exon:11527;Parent=Msa1245890-mRNA-1 |
chr8_2 | five_prime_UTR | 36151801 | 36151888 | 36151801 | ID=Msa1245890-mRNA-1:five_prime_utr;Parent=Msa1245890-mRNA-1 |
chr8_2 | CDS | 36151671 | 36151800 | 36151671 | ID=Msa1245890-mRNA-1:cds;Parent=Msa1245890-mRNA-1 |
chr8_2 | CDS | 36150628 | 36151124 | 36150628 | ID=Msa1245890-mRNA-1:cds;Parent=Msa1245890-mRNA-1 |
chr8_2 | three_prime_UTR | 36150316 | 36150627 | 36150316 | ID=Msa1245890-mRNA-1:three_prime_utr;Parent=Msa1245890-mRNA-1 |
Gene Sequence |
Protein sequence |