Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0621390 | XP_003629427.1 | 98.611 | 72 | 1 | 0 | 1 | 72 | 1 | 72 | 1.16e-45 | 150 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0621390 | sp|F4JVB8|RADL1_ARATH | 66.154 | 65 | 21 | 1 | 5 | 68 | 14 | 78 | 1.39e-27 | 98.2 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000220 | Msa0621390 | 0.837078 | 6.426941e-57 | -8.615850e-47 |
| Msa0001460 | Msa0621390 | 0.812444 | 4.227673e-51 | -8.615850e-47 |
| Msa0006580 | Msa0621390 | 0.803035 | 4.223792e-49 | -8.615850e-47 |
| Msa0049990 | Msa0621390 | 0.810958 | 8.897711e-51 | -8.615850e-47 |
| Msa0094670 | Msa0621390 | 0.810867 | 9.312515e-51 | -8.615850e-47 |
| Msa0101150 | Msa0621390 | 0.823201 | 1.573640e-53 | -8.615850e-47 |
| Msa0101210 | Msa0621390 | 0.826364 | 2.824507e-54 | -8.615850e-47 |
| Msa0607300 | Msa0621390 | 0.806490 | 8.019367e-50 | -8.615850e-47 |
| Msa0621380 | Msa0621390 | 0.951397 | 2.225000e-109 | -8.615850e-47 |
| Msa0621390 | Msa0621400 | 0.828753 | 7.545235e-55 | -8.615850e-47 |
| Msa0621390 | Msa0621410 | 0.902044 | 1.449518e-78 | -8.615850e-47 |
| Msa0621390 | Msa0639420 | 0.801525 | 8.639802e-49 | -8.615850e-47 |
| Msa0621390 | Msa0683650 | 0.814133 | 1.799647e-51 | -8.615850e-47 |
| Msa0621390 | Msa0688760 | 0.800691 | 1.279786e-48 | -8.615850e-47 |
| Msa0621390 | Msa0690350 | 0.807260 | 5.512190e-50 | -8.615850e-47 |
| Msa0621390 | Msa0710950 | 0.810009 | 1.426131e-50 | -8.615850e-47 |
| Msa0621390 | Msa0730180 | 0.816652 | 4.953111e-52 | -8.615850e-47 |
| Msa0621390 | Msa0753530 | 0.813520 | 2.455433e-51 | -8.615850e-47 |
| Msa0621390 | Msa0757990 | -0.810282 | 1.245837e-50 | -8.615850e-47 |
| Msa0621390 | Msa0770430 | 0.808498 | 3.007559e-50 | -8.615850e-47 |
| Msa0621390 | Msa0786090 | 0.800636 | 1.313176e-48 | -8.615850e-47 |
| Msa0621390 | Msa0808420 | 0.803903 | 2.790904e-49 | -8.615850e-47 |
| Msa0621390 | Msa0829570 | 0.813620 | 2.333756e-51 | -8.615850e-47 |
| Msa0621390 | Msa0836200 | 0.800201 | 1.610735e-48 | -8.615850e-47 |
| Msa0621390 | Msa0846180 | 0.810441 | 1.151020e-50 | -8.615850e-47 |
| Msa0621390 | Msa0875130 | 0.821407 | 4.105566e-53 | -8.615850e-47 |
| Msa0621390 | Msa0881050 | 0.822957 | 1.793977e-53 | -8.615850e-47 |
| Msa0621390 | Msa0899140 | 0.800144 | 1.654496e-48 | -8.615850e-47 |
| Msa0621390 | Msa0931730 | 0.804701 | 1.903927e-49 | -8.615850e-47 |
| Msa0621390 | Msa0968450 | 0.829952 | 3.859982e-55 | -8.615850e-47 |
| Msa0621390 | Msa0976950 | 0.804251 | 2.362446e-49 | -8.615850e-47 |
| Msa0621390 | Msa1000470 | 0.831542 | 1.574063e-55 | -8.615850e-47 |
| Msa0621390 | Msa1033160 | 0.802589 | 5.223135e-49 | -8.615850e-47 |
| Msa0621390 | Msa1067430 | 0.812862 | 3.424597e-51 | -8.615850e-47 |
| Msa0621390 | Msa1161160 | 0.816507 | 5.336779e-52 | -8.615850e-47 |
| Msa0621390 | Msa1174320 | 0.803299 | 3.725240e-49 | -8.615850e-47 |
| Msa0621390 | Msa1214900 | 0.834305 | 3.236380e-56 | -8.615850e-47 |
| Msa0621390 | Msa1222390 | 0.805826 | 1.106713e-49 | -8.615850e-47 |
| Msa0621390 | Msa1229050 | 0.800878 | 1.172343e-48 | -8.615850e-47 |
| Msa0621390 | Msa1243860 | 0.816667 | 4.914247e-52 | -8.615850e-47 |
| Msa0621390 | Msa1255120 | 0.916961 | 9.477532e-86 | -8.615850e-47 |
| Msa0621390 | Msa1255130 | 0.880750 | 4.245190e-70 | -8.615850e-47 |
| Msa0621390 | Msa1255140 | 0.867705 | 1.123469e-65 | -8.615850e-47 |
| Msa0621390 | Msa1258100 | 0.806624 | 7.516774e-50 | -8.615850e-47 |
| Msa0621390 | Msa1258770 | 0.827349 | 1.643012e-54 | -8.615850e-47 |
| Msa0621390 | Msa1271490 | 0.800338 | 1.510337e-48 | -8.615850e-47 |
| Msa0621390 | Msa1295560 | 0.801778 | 7.667849e-49 | -8.615850e-47 |
| Msa0621390 | Msa1295570 | 0.920012 | 2.190861e-87 | -8.615850e-47 |
| Msa0621390 | Msa1295580 | 0.979283 | 1.248397e-147 | -8.615850e-47 |
| Msa0621390 | Msa1295590 | 0.859442 | 4.124886e-63 | -8.615850e-47 |
| Msa0621390 | Msa1295600 | 0.862752 | 4.056104e-64 | -8.615850e-47 |
| Msa0621390 | Msa1330280 | 0.842279 | 2.849804e-58 | -8.615850e-47 |
| Msa0621390 | Msa1344940 | 0.824115 | 9.615383e-54 | -8.615850e-47 |
| Msa0621390 | Msa1367600 | 0.807737 | 4.366270e-50 | -8.615850e-47 |
| Msa0621390 | Msa1369900 | 0.833299 | 5.776697e-56 | -8.615850e-47 |
| Msa0621390 | Msa1406550 | 0.814536 | 1.465702e-51 | -8.615850e-47 |
| Msa0621390 | Msa1406880 | 0.805124 | 1.553492e-49 | -8.615850e-47 |
| Msa0621390 | Msa1415250 | 0.806177 | 9.336584e-50 | -8.615850e-47 |
| Msa0621390 | Msa1435910 | 0.808400 | 3.156008e-50 | -8.615850e-47 |
| Msa0621390 | Msa1464800 | 0.803791 | 2.945569e-49 | -8.615850e-47 |
| Msa0131390 | Msa0621390 | 0.821834 | 3.270156e-53 | -8.615850e-47 |
| Msa0144340 | Msa0621390 | 0.802365 | 5.806950e-49 | -8.615850e-47 |
| Msa0177490 | Msa0621390 | 0.821011 | 5.066025e-53 | -8.615850e-47 |
| Msa0217470 | Msa0621390 | 0.819434 | 1.163810e-52 | -8.615850e-47 |
| Msa0403670 | Msa0621390 | 0.840564 | 8.057954e-58 | -8.615850e-47 |
| Msa0405040 | Msa0621390 | 0.836235 | 1.054036e-56 | -8.615850e-47 |
| Msa0427590 | Msa0621390 | 0.802277 | 6.056536e-49 | -8.615850e-47 |
| Msa0430020 | Msa0621390 | 0.801318 | 9.528654e-49 | -8.615850e-47 |
| Msa0432390 | Msa0621390 | 0.803486 | 3.407484e-49 | -8.615850e-47 |
| Msa0434630 | Msa0621390 | 0.803189 | 3.925746e-49 | -8.615850e-47 |
| Msa0446480 | Msa0621390 | 0.811115 | 8.225008e-51 | -8.615850e-47 |
| Msa0455200 | Msa0621390 | 0.808609 | 2.847779e-50 | -8.615850e-47 |
| Msa0471090 | Msa0621390 | 0.800264 | 1.563581e-48 | -8.615850e-47 |
| Msa0476180 | Msa0621390 | 0.801446 | 8.968640e-49 | -8.615850e-47 |
| Msa0321230 | Msa0621390 | 0.800140 | 1.657274e-48 | -8.615850e-47 |
| Msa0342620 | Msa0621390 | 0.801401 | 9.162915e-49 | -8.615850e-47 |
| Msa0362840 | Msa0621390 | 0.812610 | 3.887779e-51 | -8.615850e-47 |
| Msa0498320 | Msa0621390 | 0.823672 | 1.221026e-53 | -8.615850e-47 |
| Msa0503120 | Msa0621390 | 0.803469 | 3.434884e-49 | -8.615850e-47 |
| Msa0512130 | Msa0621390 | 0.811867 | 5.648667e-51 | -8.615850e-47 |
| Msa0513660 | Msa0621390 | 0.808986 | 2.365483e-50 | -8.615850e-47 |
| Msa0524510 | Msa0621390 | 0.818678 | 1.729350e-52 | -8.615850e-47 |
| Msa0547780 | Msa0621390 | 0.806730 | 7.138728e-50 | -8.615850e-47 |
| Msa0553350 | Msa0621390 | 0.805337 | 1.401415e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0621390 | MtrunA17_Chr8g0373111 | 98.611 | 72 | 1 | 0 | 1 | 72 | 1 | 72 | 1.06e-49 | 150 |
| Msa0621390 | MtrunA17_Chr8g0373121 | 98.611 | 72 | 1 | 0 | 1 | 72 | 1 | 72 | 1.06e-49 | 150 |
| Msa0621390 | MtrunA17_Chr8g0373131 | 97.222 | 72 | 2 | 0 | 1 | 72 | 1 | 72 | 3.36e-49 | 149 |
| Msa0621390 | MtrunA17_Chr5g0404301 | 82.258 | 62 | 11 | 0 | 3 | 64 | 2 | 63 | 1.06e-35 | 114 |
| Msa0621390 | MtrunA17_Chr8g0373101 | 68.571 | 70 | 21 | 1 | 1 | 70 | 1 | 69 | 3.10e-32 | 106 |
| Msa0621390 | MtrunA17_Chr3g0144631 | 64.615 | 65 | 22 | 1 | 5 | 68 | 16 | 80 | 1.12e-27 | 95.1 |
| Msa0621390 | MtrunA17_Chr1g0155181 | 55.224 | 67 | 29 | 1 | 2 | 67 | 4 | 70 | 6.04e-26 | 90.9 |
| Msa0621390 | MtrunA17_Chr6g0449111 | 57.576 | 66 | 27 | 1 | 2 | 66 | 7 | 72 | 2.73e-25 | 89.0 |
| Msa0621390 | MtrunA17_Chr5g0404101 | 54.688 | 64 | 28 | 1 | 5 | 67 | 19 | 82 | 1.38e-24 | 87.8 |
| Msa0621390 | MtrunA17_Chr3g0141601 | 55.072 | 69 | 30 | 1 | 2 | 69 | 4 | 72 | 6.39e-24 | 85.9 |
| Msa0621390 | MtrunA17_Chr3g0081631 | 55.072 | 69 | 29 | 1 | 2 | 68 | 7 | 75 | 8.47e-23 | 83.2 |
| Msa0621390 | MtrunA17_Chr7g0255841 | 59.016 | 61 | 24 | 1 | 8 | 67 | 15 | 75 | 3.53e-22 | 81.6 |
| Msa0621390 | MtrunA17_Chr5g0429521 | 54.930 | 71 | 31 | 1 | 1 | 70 | 25 | 95 | 7.70e-21 | 82.8 |
| Msa0621390 | MtrunA17_Chr3g0141641 | 55.385 | 65 | 28 | 1 | 4 | 67 | 2 | 66 | 6.53e-20 | 75.9 |
| Msa0621390 | MtrunA17_Chr3g0104071 | 54.412 | 68 | 30 | 1 | 2 | 68 | 40 | 107 | 8.68e-20 | 80.1 |
| Msa0621390 | MtrunA17_Chr7g0241761 | 51.429 | 70 | 33 | 1 | 2 | 70 | 32 | 101 | 7.15e-18 | 75.1 |
| Msa0621390 | MtrunA17_Chr8g0365011 | 43.836 | 73 | 40 | 1 | 1 | 72 | 4 | 76 | 5.99e-17 | 72.4 |
| Msa0621390 | MtrunA17_Chr5g0436501 | 50.769 | 65 | 31 | 1 | 3 | 66 | 25 | 89 | 5.16e-16 | 69.7 |
| Msa0621390 | MtrunA17_Chr1g0194071 | 47.143 | 70 | 35 | 1 | 3 | 70 | 9 | 78 | 3.30e-15 | 63.9 |
| Msa0621390 | MtrunA17_Chr7g0270711 | 50.820 | 61 | 28 | 1 | 3 | 61 | 9 | 69 | 1.29e-14 | 62.4 |
| Msa0621390 | MtrunA17_Chr1g0162081 | 38.571 | 70 | 42 | 1 | 2 | 70 | 9 | 78 | 2.60e-14 | 65.1 |
| Msa0621390 | MtrunA17_Chr8g0364741 | 37.500 | 72 | 44 | 1 | 2 | 72 | 7 | 78 | 1.87e-13 | 60.5 |
| Msa0621390 | MtrunA17_Chr1g0210471 | 40.000 | 65 | 38 | 1 | 3 | 66 | 22 | 86 | 1.32e-11 | 57.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0621390 | AT4G39250.1 | 66.154 | 65 | 21 | 1 | 5 | 68 | 14 | 78 | 1.41e-28 | 98.2 |
| Msa0621390 | AT1G75250.2 | 62.687 | 67 | 24 | 1 | 3 | 68 | 10 | 76 | 4.76e-27 | 94.4 |
| Msa0621390 | AT1G75250.1 | 64.615 | 65 | 22 | 1 | 5 | 68 | 12 | 76 | 6.58e-27 | 94.7 |
| Msa0621390 | AT2G21650.1 | 56.522 | 69 | 29 | 1 | 5 | 72 | 14 | 82 | 8.41e-26 | 91.3 |
| Msa0621390 | AT1G19510.1 | 61.290 | 62 | 23 | 1 | 8 | 68 | 15 | 76 | 7.36e-24 | 86.3 |
| Msa0621390 | AT2G18328.1 | 55.385 | 65 | 27 | 2 | 8 | 71 | 14 | 77 | 1.04e-18 | 72.8 |
| Msa0621390 | AT2G38090.1 | 51.429 | 70 | 33 | 1 | 2 | 70 | 26 | 95 | 3.22e-18 | 76.3 |
| Msa0621390 | AT5G58900.1 | 52.174 | 69 | 32 | 1 | 2 | 69 | 31 | 99 | 1.33e-17 | 74.3 |
| Msa0621390 | AT4G36570.1 | 65.909 | 44 | 14 | 1 | 5 | 47 | 12 | 55 | 6.84e-16 | 65.1 |
| Msa0621390 | AT5G05790.2 | 45.714 | 70 | 37 | 1 | 2 | 70 | 28 | 97 | 9.27e-16 | 69.3 |
| Msa0621390 | AT5G05790.1 | 45.714 | 70 | 37 | 1 | 2 | 70 | 28 | 97 | 9.27e-16 | 69.3 |
| Msa0621390 | AT3G11280.2 | 49.206 | 63 | 31 | 1 | 5 | 66 | 33 | 95 | 2.42e-15 | 68.2 |
| Msa0621390 | AT3G11280.1 | 49.206 | 63 | 31 | 1 | 5 | 66 | 33 | 95 | 2.42e-15 | 68.2 |
| Msa0621390 | AT5G08520.1 | 47.826 | 69 | 35 | 1 | 5 | 72 | 12 | 80 | 3.62e-14 | 65.1 |
| Msa0621390 | AT5G04760.1 | 43.284 | 67 | 37 | 1 | 1 | 66 | 1 | 67 | 3.29e-13 | 61.6 |
| Msa0621390 | AT5G01200.1 | 45.070 | 71 | 37 | 2 | 4 | 72 | 29 | 99 | 1.61e-12 | 60.5 |
| Msa0621390 | AT1G49010.1 | 41.429 | 70 | 37 | 2 | 1 | 66 | 4 | 73 | 5.46e-12 | 59.3 |
Find 26 sgRNAs with CRISPR-Local
Find 204 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCAACATTGTGCCATCTTTC+AGG | 0.193556 | 4_2:-73475077 | None:intergenic |
| GTACAGTGTAAGGAAATTAA+AGG | 0.280704 | 4_2:-73476780 | None:intergenic |
| CAAGCTTAATTATTGTGTTC+TGG | 0.297492 | 4_2:-73476582 | None:intergenic |
| AATGCATACTAGTGTATCTT+TGG | 0.359894 | 4_2:+73476644 | Msa0621390:three_prime_UTR |
| ATTAAAGATACGTCAAATAC+TGG | 0.365763 | 4_2:-73476614 | None:intergenic |
| ATAGAAAGAAATTAATATAT+AGG | 0.371156 | 4_2:-73476724 | None:intergenic |
| TTCATTCATTCATCAACAAA+TGG | 0.409031 | 4_2:+73474986 | Msa0621390:exon |
| TGTAACGAGGAAAAGGGATA+TGG | 0.417505 | 4_2:-73475181 | None:intergenic |
| TACGTTGAACATCTTCTTTG+AGG | 0.435409 | 4_2:-73475148 | None:intergenic |
| ATCAACAAATGGCAACCTCT+TGG | 0.450563 | 4_2:+73474997 | Msa0621390:exon |
| CAAACTGTTTGAACAAGCAT+TGG | 0.467435 | 4_2:+73475034 | Msa0621390:CDS |
| TCATTATTGTAAGTTTATGA+AGG | 0.469922 | 4_2:+73476837 | Msa0621390:three_prime_UTR |
| TACAGTGTAAGGAAATTAAA+GGG | 0.482580 | 4_2:-73476779 | None:intergenic |
| CACAATGTTGCCAAAGTGGT+TGG | 0.534351 | 4_2:+73475089 | Msa0621390:CDS |
| TGGCAACCTCTTGGACTGCA+AGG | 0.539984 | 4_2:+73475006 | Msa0621390:CDS |
| ATAGAGAAACTCCTGAAAGA+TGG | 0.546752 | 4_2:+73475066 | Msa0621390:CDS |
| AAAACTAACACCAACTCCTA+AGG | 0.547909 | 4_2:+73475203 | Msa0621390:CDS |
| AAGATACGTCAAATACTGGT+TGG | 0.552145 | 4_2:-73476610 | None:intergenic |
| AGAAGAGTGCCACATTCACT+TGG | 0.560492 | 4_2:-73476699 | None:intergenic |
| ATATATTATACCTTAGGAGT+TGG | 0.560505 | 4_2:-73475213 | None:intergenic |
| TGTAAGGAAATTAAAGGGCG+AGG | 0.564312 | 4_2:-73476774 | None:intergenic |
| GTTCTGCCTTGCAGTCCAAG+AGG | 0.596751 | 4_2:-73475012 | None:intergenic |
| AGTGCCACATTCACTTGGCA+AGG | 0.606187 | 4_2:-73476694 | None:intergenic |
| ATGGCACAATGTTGCCAAAG+TGG | 0.642850 | 4_2:+73475085 | Msa0621390:CDS |
| TGCACCTTGCCAAGTGAATG+TGG | 0.653689 | 4_2:+73476690 | Msa0621390:three_prime_UTR |
| GATGTTCAACGTATTGAGCG+TGG | 0.669371 | 4_2:+73475158 | Msa0621390:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATAAGTGTTTAATATATT+AGG | - | chr4_2:73475361-73475380 | None:intergenic | 10.0% |
| !!! | TTAATTGAGATTTTATATTA+TGG | - | chr4_2:73475878-73475897 | None:intergenic | 10.0% |
| !!! | ATATGTTTAATTTTTTTCTT+AGG | + | chr4_2:73476054-73476073 | Msa0621390:intron | 10.0% |
| !! | ATATTATATAGTTTATTCAA+TGG | - | chr4_2:73476194-73476213 | None:intergenic | 10.0% |
| !! | AATAAACTATATAATATCAA+TGG | + | chr4_2:73476197-73476216 | Msa0621390:intron | 10.0% |
| !!! | ATAATAAGTATTTGAAATTT+TGG | + | chr4_2:73476453-73476472 | Msa0621390:intron | 10.0% |
| !!! | TAATAAGTATTTGAAATTTT+GGG | + | chr4_2:73476454-73476473 | Msa0621390:intron | 10.0% |
| !! | ATAGAAAGAAATTAATATAT+AGG | - | chr4_2:73476727-73476746 | None:intergenic | 10.0% |
| !!! | TAAATGCAATATTTTATTTT+TGG | - | chr4_2:73476805-73476824 | None:intergenic | 10.0% |
| !! | ATATAAGTGTTTAATATATT+AGG | - | chr4_2:73475361-73475380 | None:intergenic | 10.0% |
| !!! | TTAATTGAGATTTTATATTA+TGG | - | chr4_2:73475878-73475897 | None:intergenic | 10.0% |
| !!! | ATATGTTTAATTTTTTTCTT+AGG | + | chr4_2:73476054-73476073 | Msa0621390:intron | 10.0% |
| !! | ATATTATATAGTTTATTCAA+TGG | - | chr4_2:73476194-73476213 | None:intergenic | 10.0% |
| !! | AATAAACTATATAATATCAA+TGG | + | chr4_2:73476197-73476216 | Msa0621390:intron | 10.0% |
| !!! | ATAATAAGTATTTGAAATTT+TGG | + | chr4_2:73476453-73476472 | Msa0621390:intron | 10.0% |
| !!! | TAATAAGTATTTGAAATTTT+GGG | + | chr4_2:73476454-73476473 | Msa0621390:intron | 10.0% |
| !! | ATAGAAAGAAATTAATATAT+AGG | - | chr4_2:73476727-73476746 | None:intergenic | 10.0% |
| !!! | TAAATGCAATATTTTATTTT+TGG | - | chr4_2:73476805-73476824 | None:intergenic | 10.0% |
| !!! | TTAAATTAGTATGTTTTTGA+GGG | + | chr4_2:73475274-73475293 | Msa0621390:intron | 15.0% |
| !! | TAATATCTAATTAAGTTTAG+CGG | - | chr4_2:73475335-73475354 | None:intergenic | 15.0% |
| !!! | TTTAAGTTAAACTTAGTTTA+GGG | - | chr4_2:73475390-73475409 | None:intergenic | 15.0% |
| !!! | ATTTAAGTTAAACTTAGTTT+AGG | - | chr4_2:73475391-73475410 | None:intergenic | 15.0% |
| !!! | TTATAAAGTTTTTTTTGAAG+AGG | - | chr4_2:73476377-73476396 | None:intergenic | 15.0% |
| !!! | TTAAATTAGTATGTTTTTGA+GGG | + | chr4_2:73475274-73475293 | Msa0621390:intron | 15.0% |
| !! | TAATATCTAATTAAGTTTAG+CGG | - | chr4_2:73475335-73475354 | None:intergenic | 15.0% |
| !!! | TTTAAGTTAAACTTAGTTTA+GGG | - | chr4_2:73475390-73475409 | None:intergenic | 15.0% |
| !!! | ATTTAAGTTAAACTTAGTTT+AGG | - | chr4_2:73475391-73475410 | None:intergenic | 15.0% |
| !!! | TTATAAAGTTTTTTTTGAAG+AGG | - | chr4_2:73476377-73476396 | None:intergenic | 15.0% |
| !! | TATTGTCAGAAAAAAGAATA+AGG | - | chr4_2:73474959-73474978 | None:intergenic | 20.0% |
| !! | AACATACTAATTTAAGAACA+TGG | - | chr4_2:73475269-73475288 | None:intergenic | 20.0% |
| !!! | CTTAAATTAGTATGTTTTTG+AGG | + | chr4_2:73475273-73475292 | Msa0621390:intron | 20.0% |
| !! | TTAAGTTAAACTTAGTTTAG+GGG | - | chr4_2:73475389-73475408 | None:intergenic | 20.0% |
| !!! | TTAAATTAGCCTACTTAAAT+TGG | - | chr4_2:73475509-73475528 | None:intergenic | 20.0% |
| !! | TATCATCTTTACAAACATAT+AGG | + | chr4_2:73475593-73475612 | Msa0621390:intron | 20.0% |
| !! | CACAAAAGTTGTTAAAAAAA+TGG | - | chr4_2:73475693-73475712 | None:intergenic | 20.0% |
| !!! | TACAAAGAAATTTTAAGTAG+TGG | - | chr4_2:73475779-73475798 | None:intergenic | 20.0% |
| !!! | AGTTATTAGTTTTATATACG+TGG | + | chr4_2:73476004-73476023 | Msa0621390:intron | 20.0% |
| !!! | GATTCACTTTTTTTCTAATT+TGG | - | chr4_2:73476271-73476290 | None:intergenic | 20.0% |
| !!! | TTTTTTCCGTATAAAATTGA+TGG | - | chr4_2:73476404-73476423 | None:intergenic | 20.0% |
| !! | TCATTATTGTAAGTTTATGA+AGG | + | chr4_2:73476837-73476856 | Msa0621390:three_prime_UTR | 20.0% |
| !! | TATTGTCAGAAAAAAGAATA+AGG | - | chr4_2:73474959-73474978 | None:intergenic | 20.0% |
| !! | AACATACTAATTTAAGAACA+TGG | - | chr4_2:73475269-73475288 | None:intergenic | 20.0% |
| !!! | CTTAAATTAGTATGTTTTTG+AGG | + | chr4_2:73475273-73475292 | Msa0621390:intron | 20.0% |
| !! | TTAAGTTAAACTTAGTTTAG+GGG | - | chr4_2:73475389-73475408 | None:intergenic | 20.0% |
| !!! | TTAAATTAGCCTACTTAAAT+TGG | - | chr4_2:73475509-73475528 | None:intergenic | 20.0% |
| !! | TATCATCTTTACAAACATAT+AGG | + | chr4_2:73475593-73475612 | Msa0621390:intron | 20.0% |
| !! | CACAAAAGTTGTTAAAAAAA+TGG | - | chr4_2:73475693-73475712 | None:intergenic | 20.0% |
| !!! | TACAAAGAAATTTTAAGTAG+TGG | - | chr4_2:73475779-73475798 | None:intergenic | 20.0% |
| !!! | AGTTATTAGTTTTATATACG+TGG | + | chr4_2:73476004-73476023 | Msa0621390:intron | 20.0% |
| !!! | GATTCACTTTTTTTCTAATT+TGG | - | chr4_2:73476271-73476290 | None:intergenic | 20.0% |
| !!! | TTTTTTCCGTATAAAATTGA+TGG | - | chr4_2:73476404-73476423 | None:intergenic | 20.0% |
| !! | TCATTATTGTAAGTTTATGA+AGG | + | chr4_2:73476837-73476856 | Msa0621390:three_prime_UTR | 20.0% |
| ! | TTCATTCATTCATCAACAAA+TGG | + | chr4_2:73474986-73475005 | Msa0621390:exon | 25.0% |
| ! | ATATATTATACCTTAGGAGT+TGG | - | chr4_2:73475216-73475235 | None:intergenic | 25.0% |
| ! | CAGTACATATATTATACCTT+AGG | - | chr4_2:73475222-73475241 | None:intergenic | 25.0% |
| ! | ATATCATTTCTCTTATGAGA+TGG | - | chr4_2:73475662-73475681 | None:intergenic | 25.0% |
| !!! | TGTTTTTACTTTCTCTCTAT+TGG | + | chr4_2:73475740-73475759 | Msa0621390:intron | 25.0% |
| ! | AATTCTTATCCCATTCAATA+TGG | - | chr4_2:73475951-73475970 | None:intergenic | 25.0% |
| ! | TATTGAATGGGATAAGAATT+TGG | + | chr4_2:73475951-73475970 | Msa0621390:intron | 25.0% |
| ! | ATTGAATGGGATAAGAATTT+GGG | + | chr4_2:73475952-73475971 | Msa0621390:intron | 25.0% |
| ! | GTTTATTCAATGGACAATAT+AGG | - | chr4_2:73476184-73476203 | None:intergenic | 25.0% |
| !! | AACCTTCCATCAATTTTATA+CGG | + | chr4_2:73476395-73476414 | Msa0621390:intron | 25.0% |
| ! | ATTAAAGATACGTCAAATAC+TGG | - | chr4_2:73476617-73476636 | None:intergenic | 25.0% |
| ! | TACAGTGTAAGGAAATTAAA+GGG | - | chr4_2:73476782-73476801 | None:intergenic | 25.0% |
| !!! | TTTATTTTTGGTACAGTGTA+AGG | - | chr4_2:73476793-73476812 | None:intergenic | 25.0% |
| ! | TTCATTCATTCATCAACAAA+TGG | + | chr4_2:73474986-73475005 | Msa0621390:exon | 25.0% |
| ! | ATATATTATACCTTAGGAGT+TGG | - | chr4_2:73475216-73475235 | None:intergenic | 25.0% |
| ! | CAGTACATATATTATACCTT+AGG | - | chr4_2:73475222-73475241 | None:intergenic | 25.0% |
| ! | ATATCATTTCTCTTATGAGA+TGG | - | chr4_2:73475662-73475681 | None:intergenic | 25.0% |
| !!! | TGTTTTTACTTTCTCTCTAT+TGG | + | chr4_2:73475740-73475759 | Msa0621390:intron | 25.0% |
| ! | AATTCTTATCCCATTCAATA+TGG | - | chr4_2:73475951-73475970 | None:intergenic | 25.0% |
| ! | TATTGAATGGGATAAGAATT+TGG | + | chr4_2:73475951-73475970 | Msa0621390:intron | 25.0% |
| ! | ATTGAATGGGATAAGAATTT+GGG | + | chr4_2:73475952-73475971 | Msa0621390:intron | 25.0% |
| ! | GTTTATTCAATGGACAATAT+AGG | - | chr4_2:73476184-73476203 | None:intergenic | 25.0% |
| !! | AACCTTCCATCAATTTTATA+CGG | + | chr4_2:73476395-73476414 | Msa0621390:intron | 25.0% |
| ! | ATTAAAGATACGTCAAATAC+TGG | - | chr4_2:73476617-73476636 | None:intergenic | 25.0% |
| ! | TACAGTGTAAGGAAATTAAA+GGG | - | chr4_2:73476782-73476801 | None:intergenic | 25.0% |
| !!! | TTTATTTTTGGTACAGTGTA+AGG | - | chr4_2:73476793-73476812 | None:intergenic | 25.0% |
| GTCAGAAAAAAGAATAAGGT+TGG | - | chr4_2:73474955-73474974 | None:intergenic | 30.0% | |
| !!! | TAGTTTTGTAACGAGGAAAA+GGG | - | chr4_2:73475190-73475209 | None:intergenic | 30.0% |
| !!! | TTAGTTTTGTAACGAGGAAA+AGG | - | chr4_2:73475191-73475210 | None:intergenic | 30.0% |
| ATTTAGAAACTAAACCCACT+TGG | + | chr4_2:73475409-73475428 | Msa0621390:intron | 30.0% | |
| TCTCTAGTACCAATTTAAGT+AGG | + | chr4_2:73475497-73475516 | Msa0621390:intron | 30.0% | |
| TGCTTATTCTGCACAATTTA+GGG | - | chr4_2:73475621-73475640 | None:intergenic | 30.0% | |
| TTGCTTATTCTGCACAATTT+AGG | - | chr4_2:73475622-73475641 | None:intergenic | 30.0% | |
| ATTCCTCTCTCATAATATTG+AGG | + | chr4_2:73475848-73475867 | Msa0621390:intron | 30.0% | |
| AAACCTCAATATTATGAGAG+AGG | - | chr4_2:73475854-73475873 | None:intergenic | 30.0% | |
| !! | AATAACTGTCGCACTTTTTA+GGG | - | chr4_2:73475991-73476010 | None:intergenic | 30.0% |
| !! | TAATAACTGTCGCACTTTTT+AGG | - | chr4_2:73475992-73476011 | None:intergenic | 30.0% |
| !!! | GTTTTTTTTGAAGAGGAGAA+AGG | - | chr4_2:73476370-73476389 | None:intergenic | 30.0% |
| TTCCGTATAAAATTGATGGA+AGG | - | chr4_2:73476400-73476419 | None:intergenic | 30.0% | |
| CAAGCTTAATTATTGTGTTC+TGG | - | chr4_2:73476585-73476604 | None:intergenic | 30.0% | |
| AATGCATACTAGTGTATCTT+TGG | + | chr4_2:73476644-73476663 | Msa0621390:three_prime_UTR | 30.0% | |
| GTACAGTGTAAGGAAATTAA+AGG | - | chr4_2:73476783-73476802 | None:intergenic | 30.0% | |
| GTCAGAAAAAAGAATAAGGT+TGG | - | chr4_2:73474955-73474974 | None:intergenic | 30.0% | |
| !!! | TAGTTTTGTAACGAGGAAAA+GGG | - | chr4_2:73475190-73475209 | None:intergenic | 30.0% |
| !!! | TTAGTTTTGTAACGAGGAAA+AGG | - | chr4_2:73475191-73475210 | None:intergenic | 30.0% |
| ATTTAGAAACTAAACCCACT+TGG | + | chr4_2:73475409-73475428 | Msa0621390:intron | 30.0% | |
| TCTCTAGTACCAATTTAAGT+AGG | + | chr4_2:73475497-73475516 | Msa0621390:intron | 30.0% | |
| TGCTTATTCTGCACAATTTA+GGG | - | chr4_2:73475621-73475640 | None:intergenic | 30.0% | |
| TTGCTTATTCTGCACAATTT+AGG | - | chr4_2:73475622-73475641 | None:intergenic | 30.0% | |
| ATTCCTCTCTCATAATATTG+AGG | + | chr4_2:73475848-73475867 | Msa0621390:intron | 30.0% | |
| AAACCTCAATATTATGAGAG+AGG | - | chr4_2:73475854-73475873 | None:intergenic | 30.0% | |
| !! | AATAACTGTCGCACTTTTTA+GGG | - | chr4_2:73475991-73476010 | None:intergenic | 30.0% |
| !! | TAATAACTGTCGCACTTTTT+AGG | - | chr4_2:73475992-73476011 | None:intergenic | 30.0% |
| !!! | GTTTTTTTTGAAGAGGAGAA+AGG | - | chr4_2:73476370-73476389 | None:intergenic | 30.0% |
| TTCCGTATAAAATTGATGGA+AGG | - | chr4_2:73476400-73476419 | None:intergenic | 30.0% | |
| CAAGCTTAATTATTGTGTTC+TGG | - | chr4_2:73476585-73476604 | None:intergenic | 30.0% | |
| AATGCATACTAGTGTATCTT+TGG | + | chr4_2:73476644-73476663 | Msa0621390:three_prime_UTR | 30.0% | |
| GTACAGTGTAAGGAAATTAA+AGG | - | chr4_2:73476783-73476802 | None:intergenic | 30.0% | |
| CAAACTGTTTGAACAAGCAT+TGG | + | chr4_2:73475034-73475053 | Msa0621390:CDS | 35.0% | |
| ATAGAGAAACTCCTGAAAGA+TGG | + | chr4_2:73475066-73475085 | Msa0621390:CDS | 35.0% | |
| !! | AACTGATTTTCCAACCACTT+TGG | - | chr4_2:73475102-73475121 | None:intergenic | 35.0% |
| TACGTTGAACATCTTCTTTG+AGG | - | chr4_2:73475151-73475170 | None:intergenic | 35.0% | |
| !!! | TTGGTGTTAGTTTTGTAACG+AGG | - | chr4_2:73475197-73475216 | None:intergenic | 35.0% |
| AAAACTAACACCAACTCCTA+AGG | + | chr4_2:73475203-73475222 | Msa0621390:CDS | 35.0% | |
| !! | TTTTGAGGGAAGACTAAAAG+AGG | + | chr4_2:73475288-73475307 | Msa0621390:intron | 35.0% |
| CTAAAAGAGGCTATACTCTT+TGG | + | chr4_2:73475301-73475320 | Msa0621390:intron | 35.0% | |
| TCCTAAAAGTCAATACCACT+AGG | - | chr4_2:73475440-73475459 | None:intergenic | 35.0% | |
| CCTTTGTTGAGACAATTTCT+TGG | - | chr4_2:73475814-73475833 | None:intergenic | 35.0% | |
| CCAAGAAATTGTCTCAACAA+AGG | + | chr4_2:73475811-73475830 | Msa0621390:intron | 35.0% | |
| GCACAAGTACTTTAAGTACA+CGG | - | chr4_2:73475918-73475937 | None:intergenic | 35.0% | |
| ! | CTTAAAGTACTTGTGCTATG+CGG | + | chr4_2:73475922-73475941 | Msa0621390:intron | 35.0% |
| ! | TTAAAGTACTTGTGCTATGC+GGG | + | chr4_2:73475923-73475942 | Msa0621390:intron | 35.0% |
| TAAGTCGTTGTTTAAGTGCA+TGG | - | chr4_2:73476110-73476129 | None:intergenic | 35.0% | |
| ! | AACAACGACTTATGACTTGT+CGG | + | chr4_2:73476118-73476137 | Msa0621390:intron | 35.0% |
| AAGATACGTCAAATACTGGT+TGG | - | chr4_2:73476613-73476632 | None:intergenic | 35.0% | |
| CAAACTGTTTGAACAAGCAT+TGG | + | chr4_2:73475034-73475053 | Msa0621390:CDS | 35.0% | |
| ATAGAGAAACTCCTGAAAGA+TGG | + | chr4_2:73475066-73475085 | Msa0621390:CDS | 35.0% | |
| !! | AACTGATTTTCCAACCACTT+TGG | - | chr4_2:73475102-73475121 | None:intergenic | 35.0% |
| TACGTTGAACATCTTCTTTG+AGG | - | chr4_2:73475151-73475170 | None:intergenic | 35.0% | |
| !!! | TTGGTGTTAGTTTTGTAACG+AGG | - | chr4_2:73475197-73475216 | None:intergenic | 35.0% |
| AAAACTAACACCAACTCCTA+AGG | + | chr4_2:73475203-73475222 | Msa0621390:CDS | 35.0% | |
| !! | TTTTGAGGGAAGACTAAAAG+AGG | + | chr4_2:73475288-73475307 | Msa0621390:intron | 35.0% |
| CTAAAAGAGGCTATACTCTT+TGG | + | chr4_2:73475301-73475320 | Msa0621390:intron | 35.0% | |
| TCCTAAAAGTCAATACCACT+AGG | - | chr4_2:73475440-73475459 | None:intergenic | 35.0% | |
| CCTTTGTTGAGACAATTTCT+TGG | - | chr4_2:73475814-73475833 | None:intergenic | 35.0% | |
| CCAAGAAATTGTCTCAACAA+AGG | + | chr4_2:73475811-73475830 | Msa0621390:intron | 35.0% | |
| GCACAAGTACTTTAAGTACA+CGG | - | chr4_2:73475918-73475937 | None:intergenic | 35.0% | |
| ! | CTTAAAGTACTTGTGCTATG+CGG | + | chr4_2:73475922-73475941 | Msa0621390:intron | 35.0% |
| ! | TTAAAGTACTTGTGCTATGC+GGG | + | chr4_2:73475923-73475942 | Msa0621390:intron | 35.0% |
| TAAGTCGTTGTTTAAGTGCA+TGG | - | chr4_2:73476110-73476129 | None:intergenic | 35.0% | |
| ! | AACAACGACTTATGACTTGT+CGG | + | chr4_2:73476118-73476137 | Msa0621390:intron | 35.0% |
| AAGATACGTCAAATACTGGT+TGG | - | chr4_2:73476613-73476632 | None:intergenic | 35.0% | |
| ATCAACAAATGGCAACCTCT+TGG | + | chr4_2:73474997-73475016 | Msa0621390:exon | 40.0% | |
| TGTAACGAGGAAAAGGGATA+TGG | - | chr4_2:73475184-73475203 | None:intergenic | 40.0% | |
| GAAACTAAACCCACTTGGAT+TGG | + | chr4_2:73475414-73475433 | Msa0621390:intron | 40.0% | |
| !!! | GCCTAGTGGTATTGACTTTT+AGG | + | chr4_2:73475436-73475455 | Msa0621390:intron | 40.0% |
| GAGATCTCAAGGAAATTCTC+AGG | - | chr4_2:73475463-73475482 | None:intergenic | 40.0% | |
| GAGAATTTCCTTGAGATCTC+AGG | + | chr4_2:73475463-73475482 | Msa0621390:intron | 40.0% | |
| GAATTGAACCTGAGATCTCA+AGG | - | chr4_2:73475474-73475493 | None:intergenic | 40.0% | |
| ! | TAAAGTACTTGTGCTATGCG+GGG | + | chr4_2:73475924-73475943 | Msa0621390:intron | 40.0% |
| GTGCATGGACATATTGTAGT+TGG | - | chr4_2:73476095-73476114 | None:intergenic | 40.0% | |
| TTGTTTGAACCTGCAAGCTT+GGG | - | chr4_2:73476224-73476243 | None:intergenic | 40.0% | |
| TTTGTTTGAACCTGCAAGCT+TGG | - | chr4_2:73476225-73476244 | None:intergenic | 40.0% | |
| ! | TCTTTTCCGATATACTTCGC+AGG | + | chr4_2:73476544-73476563 | Msa0621390:intron | 40.0% |
| CAAGAACCTGCGAAGTATAT+CGG | - | chr4_2:73476553-73476572 | None:intergenic | 40.0% | |
| TGTAAGGAAATTAAAGGGCG+AGG | - | chr4_2:73476777-73476796 | None:intergenic | 40.0% | |
| ATCAACAAATGGCAACCTCT+TGG | + | chr4_2:73474997-73475016 | Msa0621390:exon | 40.0% | |
| TGTAACGAGGAAAAGGGATA+TGG | - | chr4_2:73475184-73475203 | None:intergenic | 40.0% | |
| GAAACTAAACCCACTTGGAT+TGG | + | chr4_2:73475414-73475433 | Msa0621390:intron | 40.0% | |
| !!! | GCCTAGTGGTATTGACTTTT+AGG | + | chr4_2:73475436-73475455 | Msa0621390:intron | 40.0% |
| GAGATCTCAAGGAAATTCTC+AGG | - | chr4_2:73475463-73475482 | None:intergenic | 40.0% | |
| GAGAATTTCCTTGAGATCTC+AGG | + | chr4_2:73475463-73475482 | Msa0621390:intron | 40.0% | |
| GAATTGAACCTGAGATCTCA+AGG | - | chr4_2:73475474-73475493 | None:intergenic | 40.0% | |
| ! | TAAAGTACTTGTGCTATGCG+GGG | + | chr4_2:73475924-73475943 | Msa0621390:intron | 40.0% |
| GTGCATGGACATATTGTAGT+TGG | - | chr4_2:73476095-73476114 | None:intergenic | 40.0% | |
| TTGTTTGAACCTGCAAGCTT+GGG | - | chr4_2:73476224-73476243 | None:intergenic | 40.0% | |
| TTTGTTTGAACCTGCAAGCT+TGG | - | chr4_2:73476225-73476244 | None:intergenic | 40.0% | |
| ! | TCTTTTCCGATATACTTCGC+AGG | + | chr4_2:73476544-73476563 | Msa0621390:intron | 40.0% |
| CAAGAACCTGCGAAGTATAT+CGG | - | chr4_2:73476553-73476572 | None:intergenic | 40.0% | |
| TGTAAGGAAATTAAAGGGCG+AGG | - | chr4_2:73476777-73476796 | None:intergenic | 40.0% | |
| GCAACATTGTGCCATCTTTC+AGG | - | chr4_2:73475080-73475099 | None:intergenic | 45.0% | |
| ATGGCACAATGTTGCCAAAG+TGG | + | chr4_2:73475085-73475104 | Msa0621390:CDS | 45.0% | |
| CACAATGTTGCCAAAGTGGT+TGG | + | chr4_2:73475089-73475108 | Msa0621390:CDS | 45.0% | |
| GATGTTCAACGTATTGAGCG+TGG | + | chr4_2:73475158-73475177 | Msa0621390:CDS | 45.0% | |
| TATGCGGGGTCCATATTGAA+TGG | + | chr4_2:73475938-73475957 | Msa0621390:intron | 45.0% | |
| ATGCGGGGTCCATATTGAAT+GGG | + | chr4_2:73475939-73475958 | Msa0621390:intron | 45.0% | |
| TGTTTGAACCTGCAAGCTTG+GGG | - | chr4_2:73476223-73476242 | None:intergenic | 45.0% | |
| !! | AGAAGAGTGCCACATTCACT+TGG | - | chr4_2:73476702-73476721 | None:intergenic | 45.0% |
| GCAACATTGTGCCATCTTTC+AGG | - | chr4_2:73475080-73475099 | None:intergenic | 45.0% | |
| ATGGCACAATGTTGCCAAAG+TGG | + | chr4_2:73475085-73475104 | Msa0621390:CDS | 45.0% | |
| CACAATGTTGCCAAAGTGGT+TGG | + | chr4_2:73475089-73475108 | Msa0621390:CDS | 45.0% | |
| GATGTTCAACGTATTGAGCG+TGG | + | chr4_2:73475158-73475177 | Msa0621390:CDS | 45.0% | |
| TATGCGGGGTCCATATTGAA+TGG | + | chr4_2:73475938-73475957 | Msa0621390:intron | 45.0% | |
| ATGCGGGGTCCATATTGAAT+GGG | + | chr4_2:73475939-73475958 | Msa0621390:intron | 45.0% | |
| TGTTTGAACCTGCAAGCTTG+GGG | - | chr4_2:73476223-73476242 | None:intergenic | 45.0% | |
| !! | AGAAGAGTGCCACATTCACT+TGG | - | chr4_2:73476702-73476721 | None:intergenic | 45.0% |
| ACCACTAGGCCAATCCAAGT+GGG | - | chr4_2:73475426-73475445 | None:intergenic | 50.0% | |
| TACCACTAGGCCAATCCAAG+TGG | - | chr4_2:73475427-73475446 | None:intergenic | 50.0% | |
| TGCACCTTGCCAAGTGAATG+TGG | + | chr4_2:73476690-73476709 | Msa0621390:three_prime_UTR | 50.0% | |
| AGTGCCACATTCACTTGGCA+AGG | - | chr4_2:73476697-73476716 | None:intergenic | 50.0% | |
| ACCACTAGGCCAATCCAAGT+GGG | - | chr4_2:73475426-73475445 | None:intergenic | 50.0% | |
| TACCACTAGGCCAATCCAAG+TGG | - | chr4_2:73475427-73475446 | None:intergenic | 50.0% | |
| TGCACCTTGCCAAGTGAATG+TGG | + | chr4_2:73476690-73476709 | Msa0621390:three_prime_UTR | 50.0% | |
| AGTGCCACATTCACTTGGCA+AGG | - | chr4_2:73476697-73476716 | None:intergenic | 50.0% | |
| TGGCAACCTCTTGGACTGCA+AGG | + | chr4_2:73475006-73475025 | Msa0621390:CDS | 55.0% | |
| GTTCTGCCTTGCAGTCCAAG+AGG | - | chr4_2:73475015-73475034 | None:intergenic | 55.0% | |
| !! | ACCCACTTGGATTGGCCTAG+TGG | + | chr4_2:73475422-73475441 | Msa0621390:intron | 55.0% |
| ATCAATGGCCCCAAGCTTGC+AGG | + | chr4_2:73476212-73476231 | Msa0621390:intron | 55.0% | |
| TGGCAACCTCTTGGACTGCA+AGG | + | chr4_2:73475006-73475025 | Msa0621390:CDS | 55.0% | |
| GTTCTGCCTTGCAGTCCAAG+AGG | - | chr4_2:73475015-73475034 | None:intergenic | 55.0% | |
| !! | ACCCACTTGGATTGGCCTAG+TGG | + | chr4_2:73475422-73475441 | Msa0621390:intron | 55.0% |
| ATCAATGGCCCCAAGCTTGC+AGG | + | chr4_2:73476212-73476231 | Msa0621390:intron | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_2 | gene | 73474938 | 73476908 | 73474938 | ID=Msa0621390;Name=Msa0621390 |
| chr4_2 | mRNA | 73474938 | 73476908 | 73474938 | ID=Msa0621390-mRNA-1;Parent=Msa0621390;Name=Msa0621390-mRNA-1;_AED=0.35;_eAED=0.35;_QI=67|0|0.5|1|0|0.5|2|343|72 |
| chr4_2 | exon | 73474938 | 73475223 | 73474938 | ID=Msa0621390-mRNA-1:exon:22064;Parent=Msa0621390-mRNA-1 |
| chr4_2 | exon | 73476566 | 73476908 | 73476566 | ID=Msa0621390-mRNA-1:exon:22065;Parent=Msa0621390-mRNA-1 |
| chr4_2 | five_prime_UTR | 73474938 | 73475004 | 73474938 | ID=Msa0621390-mRNA-1:five_prime_utr;Parent=Msa0621390-mRNA-1 |
| chr4_2 | CDS | 73475005 | 73475223 | 73475005 | ID=Msa0621390-mRNA-1:cds;Parent=Msa0621390-mRNA-1 |
| chr4_2 | three_prime_UTR | 73476566 | 73476908 | 73476566 | ID=Msa0621390-mRNA-1:three_prime_utr;Parent=Msa0621390-mRNA-1 |
| Gene Sequence |
| Protein sequence |
