AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0968450


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0968450 MtrunA17_Chr4g0057941 96.352 466 10 2 1 464 1 461 0.0 918
Msa0968450 MtrunA17_Chr1g0147481 30.720 472 260 12 24 454 81 526 1.58e-56 202
Msa0968450 MtrunA17_Chr3g0129101 32.203 354 207 11 20 361 158 490 2.98e-45 168
Msa0968450 MtrunA17_Chr8g0382921 28.964 473 278 15 20 453 149 602 1.04e-43 164
Msa0968450 MtrunA17_Chr5g0428451 31.274 259 164 4 78 332 135 383 5.84e-39 148
Msa0968450 MtrunA17_Chr3g0120791 28.097 452 288 13 20 453 148 580 4.33e-38 147
Msa0968450 MtrunA17_Chr6g0465161 27.654 405 261 10 61 457 122 502 4.96e-37 144
Msa0968450 MtrunA17_Chr4g0012061 26.142 394 264 9 59 439 136 515 6.02e-37 144
Msa0968450 MtrunA17_Chr5g0433911 26.190 378 251 8 64 430 59 419 3.11e-35 137
Msa0968450 MtrunA17_Chr7g0230671 24.638 414 288 9 32 439 108 503 1.66e-31 128
Msa0968450 MtrunA17_Chr3g0113361 30.159 315 192 9 64 362 83 385 2.70e-31 126
Msa0968450 MtrunA17_Chr1g0148121 29.508 305 186 8 68 362 131 416 2.93e-31 127
Msa0968450 MtrunA17_Chr3g0136721 29.641 334 189 12 39 354 115 420 3.06e-30 124
Msa0968450 MtrunA17_Chr1g0169361 27.368 285 185 7 62 342 177 443 1.53e-28 119
Msa0968450 MtrunA17_Chr1g0199921 25.393 382 267 8 77 447 209 583 3.54e-25 109
Msa0968450 MtrunA17_Chr1g0193751 28.443 334 210 9 72 402 232 539 4.26e-23 102
Msa0968450 MtrunA17_Chr4g0048521 28.363 342 195 12 79 389 229 551 1.40e-21 97.8
Msa0968450 MtrunA17_Chr2g0281061 28.344 314 194 9 79 373 226 527 8.30e-20 92.4
Msa0968450 MtrunA17_Chr8g0360981 28.800 250 156 6 79 318 218 455 3.83e-19 90.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0968450 AT4G24810.2 74.945 455 112 1 7 459 4 458 0.0 724
Msa0968450 AT5G50330.1 73.731 453 117 1 8 458 5 457 0.0 722
Msa0968450 AT5G50330.2 71.523 453 111 2 8 458 5 441 0.0 691
Msa0968450 AT4G24810.6 75.181 415 101 1 47 459 1 415 0.0 663
Msa0968450 AT4G24810.1 75.181 415 101 1 47 459 1 415 0.0 663
Msa0968450 AT4G24810.3 73.934 422 101 2 47 459 1 422 0.0 657
Msa0968450 AT4G24810.4 76.341 317 75 0 47 363 1 317 0.0 514
Msa0968450 AT4G24810.5 78.000 300 66 0 47 346 1 300 1.30e-176 497
Msa0968450 AT5G24810.1 29.130 460 281 12 24 453 55 499 1.25e-50 185
Msa0968450 AT5G24810.2 27.495 491 280 14 24 453 55 530 2.32e-45 170
Msa0968450 AT5G64940.1 35.315 286 162 7 78 355 229 499 4.93e-44 165
Msa0968450 AT5G64940.2 35.315 286 162 7 78 355 229 499 4.93e-44 165
Msa0968450 AT1G65950.2 30.897 301 190 6 64 360 95 381 2.62e-41 153
Msa0968450 AT1G65950.1 27.764 407 222 11 64 436 95 463 1.19e-40 153
Msa0968450 AT3G07700.1 28.817 465 262 15 32 463 149 577 2.04e-40 154
Msa0968450 AT3G07700.2 28.817 465 262 15 32 463 149 577 2.04e-40 154
Msa0968450 AT3G07700.4 28.817 465 262 15 32 463 149 577 2.04e-40 154
Msa0968450 AT3G07700.3 30.923 401 217 14 32 420 149 501 1.16e-38 149
Msa0968450 AT1G71810.1 28.040 403 260 9 61 456 113 492 4.86e-38 147
Msa0968450 AT5G05200.1 30.116 259 167 4 78 332 136 384 4.94e-38 145
Msa0968450 AT1G79600.1 29.885 348 220 11 27 369 110 438 9.87e-35 138
Msa0968450 AT2G40090.1 27.078 373 227 10 64 418 85 430 9.18e-32 128
Msa0968450 AT4G31390.1 26.361 349 220 8 68 410 167 484 1.17e-30 125
Msa0968450 AT2G39190.2 24.429 438 304 9 32 453 165 591 3.88e-30 124
Msa0968450 AT5G24970.2 28.523 298 180 9 78 354 186 471 1.05e-28 120
Msa0968450 AT5G24970.3 28.523 298 180 9 78 354 147 432 1.12e-28 120
Msa0968450 AT3G24190.1 28.070 285 183 7 62 342 185 451 3.99e-28 118
Msa0968450 AT5G24970.1 28.283 297 179 9 78 354 147 429 3.17e-27 115
Msa0968450 AT4G31390.3 26.582 316 196 7 100 410 1 285 1.50e-26 112
Msa0968450 AT4G31390.2 23.256 344 212 6 68 410 167 459 4.26e-25 108
Msa0968450 AT1G11390.1 30.247 324 181 11 79 375 224 529 2.10e-24 107
Msa0968450 AT4G01660.1 27.604 384 245 14 72 441 230 594 4.90e-22 99.8
Msa0968450 AT1G61640.1 28.739 341 198 11 62 375 204 526 5.34e-22 99.8
Msa0968450 AT1G61640.3 28.198 344 196 11 62 375 204 526 5.43e-22 99.4
Msa0968450 AT1G61640.2 30.275 218 121 8 62 260 204 409 4.68e-14 74.7
Msa0968450 AT2G39190.1 26.020 196 130 5 32 220 165 352 9.32e-12 67.0

Find 109 sgRNAs with CRISPR-Local

Find 570 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCACTTTAATTTCTGCGTTT+TGG 0.171283 6_3:-98920048 None:intergenic
ATTCAGATTGCGCAAATTAT+TGG 0.195300 6_3:+98920650 Msa0968450:intron
TTCAACGTTCCTTTCAGTTC+TGG 0.207099 6_3:+98920247 Msa0968450:CDS
TTGGCCAAACTTCATTCTTT+TGG 0.226678 6_3:-98920008 None:intergenic
TCATCACCAAGGTTCATTAT+TGG 0.239498 6_3:-98924873 None:intergenic
TCTCAAGCTGGCAGATTTAA+AGG 0.258548 6_3:+98928552 Msa0968450:CDS
AAACAGAAGGGCTCCTGTTT+TGG 0.286377 6_3:+98924165 Msa0968450:CDS
TCAACGTTCCTTTCAGTTCT+GGG 0.302849 6_3:+98920248 Msa0968450:CDS
AATTATTGGGAAGCCGGATT+TGG 0.335249 6_3:+98920664 Msa0968450:CDS
TTACAAATCAGGATATTTCC+TGG 0.335267 6_3:-98926097 None:intergenic
AGTATAGAAAACAGTTCTTC+TGG 0.335576 6_3:-98928435 None:intergenic
CCTCTGATCCTTTACAAATC+AGG 0.345654 6_3:-98926108 None:intergenic
TTCTCTATGTGCTCTGACCT+TGG 0.346332 6_3:+98920523 Msa0968450:CDS
GAATGAAGTTTGGCCAACTA+TGG 0.355804 6_3:+98920014 Msa0968450:five_prime_UTR
TTCAGATTGCGCAAATTATT+GGG 0.360580 6_3:+98920651 Msa0968450:intron
CAGGTTGCCTTGCTAGATTA+TGG 0.371394 6_3:+98926349 Msa0968450:intron
ATAACTCTTGGCACCAAAAC+AGG 0.373813 6_3:-98924178 None:intergenic
TATCAAATTTGATCTATATT+CGG 0.379452 6_3:+98922432 Msa0968450:CDS
GGTTCAGCATCCTGGAGTTC+AGG 0.380936 6_3:+98922348 Msa0968450:intron
GCCAAGAGTTATACGTGATA+TGG 0.403905 6_3:+98924189 Msa0968450:CDS
GCACATAGAGAAAATCTTAT+CGG 0.408274 6_3:-98920512 None:intergenic
CCTTGGTGGTTTCTTCCTCA+AGG 0.408617 6_3:+98920540 Msa0968450:CDS
CATGCAGCAGGTGCCAAATC+CGG 0.412637 6_3:-98920677 None:intergenic
ATTGAAGATTCTTCTGAAAA+CGG 0.417455 6_3:-98927758 None:intergenic
AAATCCAAAAGAATGAAGTT+TGG 0.424264 6_3:+98920004 Msa0968450:five_prime_UTR
TGGTTCCGCTTCAATTGCTC+AGG 0.426090 6_3:+98920829 Msa0968450:CDS
CGAGAGCTTCAGAGAGCTAT+AGG 0.428283 6_3:+98926449 Msa0968450:CDS
CAAAGTTTGACTCTAGCATA+TGG 0.430340 6_3:+98926031 Msa0968450:CDS
GTCAGGAGCTTACTGCTTTG+CGG 0.441507 6_3:-98924940 None:intergenic
CGTTGAGATCAACGACGATA+GGG 0.450304 6_3:-98920188 None:intergenic
ATATTCGGTGACAAAGGAAA+TGG 0.452484 6_3:+98922447 Msa0968450:CDS
CACCTGCTGCATGGGTGAAA+AGG 0.452544 6_3:+98920687 Msa0968450:CDS
GACAGAGCTTCTTCAGCAAT+GGG 0.454662 6_3:-98928531 None:intergenic
AGATTTGATGTTGAGCCTCT+TGG 0.457578 6_3:+98920809 Msa0968450:CDS
TGCGCAAATTATTGGGAAGC+CGG 0.465800 6_3:+98920658 Msa0968450:CDS
GTACAGAAAGGTCCTAGTTA+TGG 0.467202 6_3:+98924833 Msa0968450:intron
TTAACAGTGTGATAAGAAGT+TGG 0.469895 6_3:-98920737 None:intergenic
TTCCACGCGGATCCTCATCC+AGG 0.470779 6_3:+98926079 Msa0968450:CDS
CTTGTGCTTGAGAACGAGCT+TGG 0.472959 6_3:+98920761 Msa0968450:CDS
CGTCAATATATTCCATAACT+AGG 0.475606 6_3:-98924845 None:intergenic
GGGGACCTCACAACCATAGT+TGG 0.476116 6_3:-98920027 None:intergenic
TAACCAAGCCTCAATTGCTC+CGG 0.479380 6_3:-98926388 None:intergenic
ATCATCAGATCCTGAACTCC+AGG 0.485022 6_3:-98922358 None:intergenic
CGGATTTGGCACCTGCTGCA+TGG 0.486595 6_3:+98920678 Msa0968450:CDS
AACTGAAAGGAACGTTGAAT+AGG 0.489805 6_3:-98920243 None:intergenic
ATGCAACAGGTTCAGCATCC+TGG 0.494374 6_3:+98922340 Msa0968450:intron
GGAAATATCCTGATTTGTAA+AGG 0.495713 6_3:+98926100 Msa0968450:CDS
CTCCCGGAGCAATTGAGGCT+TGG 0.496977 6_3:+98926385 Msa0968450:CDS
AGACAGAGCTTCTTCAGCAA+TGG 0.501850 6_3:-98928532 None:intergenic
ACCATATCACGTATAACTCT+TGG 0.511192 6_3:-98924190 None:intergenic
TGGACAGGTGAAAGATCTCC+CGG 0.516596 6_3:+98926369 Msa0968450:CDS
TGATATTTACACCGGATACA+AGG 0.518696 6_3:+98920281 Msa0968450:CDS
ATCAGGATATTTCCTGGATG+AGG 0.526537 6_3:-98926091 None:intergenic
AAGATCTCCCGGAGCAATTG+AGG 0.528522 6_3:+98926380 Msa0968450:CDS
TCTATGTGCTCTGACCTTGG+TGG 0.528676 6_3:+98920526 Msa0968450:CDS
CTCGTTCTTGCAATTGCTGA+CGG 0.533692 6_3:+98926418 Msa0968450:CDS
GATATGAATTTGACTTCATG+AGG 0.535036 6_3:+98924098 Msa0968450:CDS
TTTGATACAAAATTACCTCC+TGG 0.535837 6_3:+98927719 Msa0968450:CDS
TGCTGCATGGGTGAAAAGGC+TGG 0.536049 6_3:+98920691 Msa0968450:CDS
TCGTTGAGATCAACGACGAT+AGG 0.536778 6_3:-98920189 None:intergenic
AGAGAAAGGAACCTTGTATC+CGG 0.538286 6_3:-98920292 None:intergenic
TGCCTTGCTAGATTATGGAC+AGG 0.538362 6_3:+98926354 Msa0968450:CDS
TAGTTATGGAATATATTGAC+GGG 0.539385 6_3:+98924847 Msa0968450:CDS
AACCAAGCCTCAATTGCTCC+GGG 0.550223 6_3:-98926387 None:intergenic
CTAGTTATGGAATATATTGA+CGG 0.551233 6_3:+98924846 Msa0968450:CDS
GTTCATAAAGCAAGACTGAA+AGG 0.551989 6_3:+98922226 Msa0968450:CDS
TCGGACAGTGCATCTACTGA+GGG 0.554413 6_3:+98928458 Msa0968450:CDS
GGATTTGGCACCTGCTGCAT+GGG 0.555700 6_3:+98920679 Msa0968450:CDS
GCAACAAGAAATGCTTAAGC+TGG 0.557859 6_3:+98927685 Msa0968450:CDS
TAGCTCTCTGAAGCTCTCGC+TGG 0.557916 6_3:-98926445 None:intergenic
TTATACGTGATATGGTTACT+AGG 0.558693 6_3:+98924197 Msa0968450:CDS
ATTATTCTTGTGCGGAACAG+TGG 0.558964 6_3:+98928505 Msa0968450:CDS
TCTTGTATAAAATAAACAGA+AGG 0.559081 6_3:+98924152 Msa0968450:CDS
CTACTGAGGGGACTTAGTGT+TGG 0.562359 6_3:+98928471 Msa0968450:CDS
AGGCATAGATCCTCATGGTA+AGG 0.570344 6_3:+98924908 Msa0968450:CDS
CGAGCAATTGATATTTACAC+CGG 0.573969 6_3:+98920273 Msa0968450:CDS
CAAAAGTGATGTTGTTGTCA+AGG 0.574147 6_3:+98922252 Msa0968450:CDS
GAAGAAGCTCTGTCTCAAGC+TGG 0.580688 6_3:+98928540 Msa0968450:CDS
TGGAATCAATTATTCTTGTG+CGG 0.581933 6_3:+98928497 Msa0968450:CDS
TGATCTATATTCGGTGACAA+AGG 0.583856 6_3:+98922441 Msa0968450:CDS
TTGAGATCAACGACGATAGG+GGG 0.584047 6_3:-98920186 None:intergenic
CATGAGGGAGGCCAGTGCAA+TGG 0.584554 6_3:+98924114 Msa0968450:CDS
AGGGGACTTAGTGTTGGACT+TGG 0.590897 6_3:+98928477 Msa0968450:CDS
TTGAATAGGACGAAACTGAA+CGG 0.594834 6_3:-98920229 None:intergenic
CACAGAAGCAAGAAGCAATG+TGG 0.595774 6_3:+98920467 Msa0968450:CDS
ACAGAAGCAAGAAGCAATGT+GGG 0.599745 6_3:+98920468 Msa0968450:CDS
CTTGTATAAAATAAACAGAA+GGG 0.600859 6_3:+98924153 Msa0968450:CDS
CCTGATTTGTAAAGGATCAG+AGG 0.602272 6_3:+98926108 Msa0968450:CDS
CACCTGTCCATAATCTAGCA+AGG 0.614889 6_3:-98926356 None:intergenic
ACAGTGTGATAAGAAGTTGG+TGG 0.616405 6_3:-98920734 None:intergenic
GGGATTCCAATAATGAACCT+TGG 0.621804 6_3:+98924867 Msa0968450:CDS
TGCAAGTGAAAATCGCAACA+TGG 0.623074 6_3:+98920068 Msa0968450:five_prime_UTR
TGCTCGAACCCAGAACTGAA+AGG 0.623946 6_3:-98920256 None:intergenic
TCTTCGCTATTTCATCACCA+AGG 0.628886 6_3:-98924884 None:intergenic
GACAAAGGAAATGGAAACAC+AGG 0.633060 6_3:+98922456 Msa0968450:CDS
TTTGGCCAACTATGGTTGTG+AGG 0.635327 6_3:+98920022 Msa0968450:five_prime_UTR
TGAATTTGACTTCATGAGGG+AGG 0.638963 6_3:+98924102 Msa0968450:CDS
GTTGAGATCAACGACGATAG+GGG 0.639810 6_3:-98920187 None:intergenic
GCAATTGAAGCGGAACCAAG+AGG 0.641988 6_3:-98920824 None:intergenic
TTCGGACAGTGCATCTACTG+AGG 0.642652 6_3:+98928457 Msa0968450:CDS
ACAAACCTGAGCAATTGAAG+CGG 0.647781 6_3:-98920834 None:intergenic
AAGAGAGGCATAGATCCTCA+TGG 0.649720 6_3:+98924903 Msa0968450:CDS
ATATGAATTTGACTTCATGA+GGG 0.661602 6_3:+98924099 Msa0968450:CDS
GGTGATGAAATAGCGAAGAG+AGG 0.673065 6_3:+98924888 Msa0968450:CDS
GCAGCTGCAACCTTACCATG+AGG 0.718002 6_3:-98924918 None:intergenic
GAAAAGTGGGTTCTTCCACG+CGG 0.752422 6_3:+98926066 Msa0968450:CDS
CGGACAGTGCATCTACTGAG+GGG 0.755015 6_3:+98928459 Msa0968450:CDS
CCTTGAGGAAGAAACCACCA+AGG 0.783560 6_3:-98920540 None:intergenic
TTCCTGGATGAGGATCCGCG+TGG 0.793865 6_3:-98926081 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! GATTTTTTTTTTAAAATAAG+TGG - chr6_3:98923745-98923764 None:intergenic 10.0%
!! ATACATTTAAACTATAAATT+TGG + chr6_3:98925703-98925722 Msa0968450:intron 10.0%
!! TTAAAAATTAAAAAACCTTG+AGG - chr6_3:98920558-98920577 None:intergenic 15.0%
!! TACATAATTGAAAATAATAG+AGG + chr6_3:98921229-98921248 Msa0968450:intron 15.0%
!! ACATAATTGAAAATAATAGA+GGG + chr6_3:98921230-98921249 Msa0968450:intron 15.0%
!!! ATTGTTTTCAAAATTTTAAC+AGG + chr6_3:98921987-98922006 Msa0968450:intron 15.0%
!!! TCATAAATCTTTTTAAGATT+TGG + chr6_3:98922172-98922191 Msa0968450:intron 15.0%
!! TATCAAATTTGATCTATATT+CGG + chr6_3:98922432-98922451 Msa0968450:CDS 15.0%
!! TATTTATAAAATTTAGGCTA+GGG - chr6_3:98923173-98923192 None:intergenic 15.0%
!! ATATTTATAAAATTTAGGCT+AGG - chr6_3:98923174-98923193 None:intergenic 15.0%
!!! AGCCTAAATTTTATAAATAT+AGG + chr6_3:98923174-98923193 Msa0968450:intron 15.0%
!! CTCCTATATTTATAAAATTT+AGG - chr6_3:98923179-98923198 None:intergenic 15.0%
!! AACAATTTATTTATTCTACT+CGG + chr6_3:98924305-98924324 Msa0968450:intron 15.0%
!!! AAATAATTAAAAAGTGTGAA+TGG + chr6_3:98924466-98924485 Msa0968450:intron 15.0%
!!! AATAATTAAAAAGTGTGAAT+GGG + chr6_3:98924467-98924486 Msa0968450:intron 15.0%
!! AAAAACATTTGTACATTTAT+TGG - chr6_3:98924717-98924736 None:intergenic 15.0%
!! TAGATTTATGTAATATAAAG+TGG + chr6_3:98925875-98925894 Msa0968450:intron 15.0%
!! TATCCTATTGTTTATTAAAT+CGG + chr6_3:98926193-98926212 Msa0968450:intron 15.0%
!! AAATTTAGTATTAATTGTGA+AGG - chr6_3:98927262-98927281 None:intergenic 15.0%
!! ACAATTAATACTAAATTTGA+TGG + chr6_3:98927264-98927283 Msa0968450:intron 15.0%
!!! CAGGATTTTATATTAATATA+GGG - chr6_3:98927328-98927347 None:intergenic 15.0%
!!! TCAGGATTTTATATTAATAT+AGG - chr6_3:98927329-98927348 None:intergenic 15.0%
!! AATATCTATATATATAGTGA+TGG - chr6_3:98927452-98927471 None:intergenic 15.0%
!! TTTATTTATATTATATGCAG+AGG + chr6_3:98927632-98927651 Msa0968450:intron 15.0%
!!! AATGAAAATTGTTGTTTTTA+AGG + chr6_3:98928068-98928087 Msa0968450:intron 15.0%
!!! ATGAAAATTGTTGTTTTTAA+GGG + chr6_3:98928069-98928088 Msa0968450:intron 15.0%
!!! AAATTTCATTGATTCTTTTT+TGG + chr6_3:98928098-98928117 Msa0968450:intron 15.0%
!!! CAAATTAGTGTTTTTAAATA+AGG + chr6_3:98928277-98928296 Msa0968450:intron 15.0%
!! ATAAACAATATTTATAGTCA+TGG + chr6_3:98928322-98928341 Msa0968450:intron 15.0%
!! AGTTAATTAATGTAGCAATT+TGG - chr6_3:98920362-98920381 None:intergenic 20.0%
!!! TCGTTTTCAATTTTATCTTA+TGG + chr6_3:98920592-98920611 Msa0968450:intron 20.0%
!! CATAATTGAAAATAATAGAG+GGG + chr6_3:98921231-98921250 Msa0968450:intron 20.0%
!! ATAATTGAAAATAATAGAGG+GGG + chr6_3:98921232-98921251 Msa0968450:intron 20.0%
!!! GAATTTTACTAAAAGTACTT+TGG - chr6_3:98921449-98921468 None:intergenic 20.0%
!!! GCTCTATGATTTTTTTTTTT+TGG - chr6_3:98921502-98921521 None:intergenic 20.0%
!! TGCTTAATTTATGTTAATCA+AGG + chr6_3:98921796-98921815 Msa0968450:intron 20.0%
!! GCTTAATTTATGTTAATCAA+GGG + chr6_3:98921797-98921816 Msa0968450:intron 20.0%
!! AAATAAAAAAAAGAACACGA+AGG - chr6_3:98921880-98921899 None:intergenic 20.0%
!!! TAAGCAAAAAACTACTTTTT+AGG + chr6_3:98922704-98922723 Msa0968450:intron 20.0%
!!! TTTTTAGGTTCATTAAATGA+GGG - chr6_3:98922778-98922797 None:intergenic 20.0%
!!! TAAGCAAAAAACTACTTTTT+AGG - chr6_3:98922704-98922723 None:intergenic 20.0%
!! ATTTATAAAATTTAGGCTAG+GGG - chr6_3:98923172-98923191 None:intergenic 20.0%
!!! ATTACTTTTGTTATATCAGA+GGG - chr6_3:98923203-98923222 None:intergenic 20.0%
!!! TATTACTTTTGTTATATCAG+AGG - chr6_3:98923204-98923223 None:intergenic 20.0%
!! GTAAATCATGTTTAAACTAA+TGG + chr6_3:98923850-98923869 Msa0968450:intron 20.0%
!!! TTTTAAGACGATAAACTAAA+GGG - chr6_3:98923954-98923973 None:intergenic 20.0%
!!! ATTTTAAGACGATAAACTAA+AGG - chr6_3:98923955-98923974 None:intergenic 20.0%
!! ACATGATAATTATTGTAGAT+TGG + chr6_3:98924076-98924095 Msa0968450:intron 20.0%
!! TCTTGTATAAAATAAACAGA+AGG + chr6_3:98924152-98924171 Msa0968450:CDS 20.0%
!! CTTGTATAAAATAAACAGAA+GGG + chr6_3:98924153-98924172 Msa0968450:CDS 20.0%
!!! ATTTTTGCAGTTAGATATTT+AGG + chr6_3:98924419-98924438 Msa0968450:intron 20.0%
!!! TTTTTGCAGTTAGATATTTA+GGG + chr6_3:98924420-98924439 Msa0968450:intron 20.0%
!!! ATAATTAAAAAGTGTGAATG+GGG + chr6_3:98924468-98924487 Msa0968450:intron 20.0%
!!! AACCTTGTTTTTATCAATAA+AGG - chr6_3:98924617-98924636 None:intergenic 20.0%
!!! TGAGATATTTTTACTAATGA+TGG + chr6_3:98924798-98924817 Msa0968450:intron 20.0%
!!! GAGATATTTTTACTAATGAT+GGG + chr6_3:98924799-98924818 Msa0968450:intron 20.0%
!!! TTACTAAGCTTTAAGAAAAT+GGG - chr6_3:98925352-98925371 None:intergenic 20.0%
!!! TCTTTATATTTTGAGTATCT+TGG + chr6_3:98925421-98925440 Msa0968450:intron 20.0%
!! AAGTAATAAAAATCAATCCT+AGG - chr6_3:98925485-98925504 None:intergenic 20.0%
!!! AGGATTGATTTTTATTACTT+AGG + chr6_3:98925485-98925504 Msa0968450:intron 20.0%
!! ATTTGTATCTCTATAAATAG+TGG + chr6_3:98925557-98925576 Msa0968450:intron 20.0%
!! CAGGAAAAATACAAATATTA+GGG - chr6_3:98926325-98926344 None:intergenic 20.0%
!! AAACAGAAATATAGATATGA+TGG + chr6_3:98926736-98926755 Msa0968450:intron 20.0%
!! AGATATTAATATTTCACCAT+AGG + chr6_3:98927465-98927484 Msa0968450:intron 20.0%
!! GATATTAATATTTCACCATA+GGG + chr6_3:98927466-98927485 Msa0968450:intron 20.0%
!!! AATTAAAAAAATTGCTGTTC+AGG + chr6_3:98927778-98927797 Msa0968450:CDS 20.0%
!!! AACAATTTGGTTTTATAATC+AGG + chr6_3:98927933-98927952 Msa0968450:intron 20.0%
!!! ACAATTTGGTTTTATAATCA+GGG + chr6_3:98927934-98927953 Msa0968450:intron 20.0%
!! TGTTAATGAGTTATAAATGA+AGG - chr6_3:98928231-98928250 None:intergenic 20.0%
!! GTTTATATGTATACATCAAT+TGG - chr6_3:98928308-98928327 None:intergenic 20.0%
!! ATATATATTTAGCGAGAAAA+AGG - chr6_3:98928388-98928407 None:intergenic 20.0%
!! AACTTCATTCTTTTGGATTT+TGG - chr6_3:98920004-98920023 None:intergenic 25.0%
! AAATCCAAAAGAATGAAGTT+TGG + chr6_3:98920004-98920023 Msa0968450:five_prime_UTR 25.0%
!! GGATAACAATTTAAGTTTAC+CGG + chr6_3:98920934-98920953 Msa0968450:intron 25.0%
! CAATAACTTGAGTGTTAAAT+TGG - chr6_3:98921170-98921189 None:intergenic 25.0%
!! TTCAATTATGTATCTCCTTT+TGG - chr6_3:98921221-98921240 None:intergenic 25.0%
! TAGAATAAACAGGTTATCTT+CGG - chr6_3:98921351-98921370 None:intergenic 25.0%
!!! TAAAAGTACTTTGGAAAATC+CGG - chr6_3:98921440-98921459 None:intergenic 25.0%
! ATAACTGAGGTATATTTGAA+TGG + chr6_3:98921543-98921562 Msa0968450:intron 25.0%
! TAACTGAGGTATATTTGAAT+GGG + chr6_3:98921544-98921563 Msa0968450:intron 25.0%
! TTCACTATCATATGATATAG+TGG + chr6_3:98921640-98921659 Msa0968450:intron 25.0%
! TAAAAATCAATATTGGGCAT+TGG - chr6_3:98922023-98922042 None:intergenic 25.0%
!!! ATTGAAAACGTTTTGTTTCT+TGG + chr6_3:98922076-98922095 Msa0968450:intron 25.0%
!!! TTGAAAACGTTTTGTTTCTT+GGG + chr6_3:98922077-98922096 Msa0968450:intron 25.0%
!! ACTGATATGTCTTTTGTAAT+AGG + chr6_3:98922204-98922223 Msa0968450:intron 25.0%
!!! TAGTACAGTTTGTTTCTAAT+AGG - chr6_3:98922658-98922677 None:intergenic 25.0%
!! TTTTTGCTTATAATAGTGAC+CGG - chr6_3:98922803-98922822 None:intergenic 25.0%
! CATTGAATAAATGATGTATG+TGG + chr6_3:98922729-98922748 Msa0968450:intron 25.0%
!!! CTTTTTAGGTTCATTAAATG+AGG - chr6_3:98922779-98922798 None:intergenic 25.0%
!! TTTTTGCTTATAATAGTGAC+CGG + chr6_3:98922803-98922822 Msa0968450:intron 25.0%
! GAATAATATATACGATCAAG+TGG + chr6_3:98922908-98922927 Msa0968450:intron 25.0%
! ATACTATTGGTAAGATATGT+TGG - chr6_3:98922943-98922962 None:intergenic 25.0%
! ATTACACTTAATTTCACTCA+CGG + chr6_3:98923058-98923077 Msa0968450:intron 25.0%
!!! TTACTTTTGTTATATCAGAG+GGG - chr6_3:98923202-98923221 None:intergenic 25.0%
! AAAAAGTGGGAAGTAATATA+GGG - chr6_3:98923267-98923286 None:intergenic 25.0%
!!! TGTCTTGCTAATGAATTTTT+TGG + chr6_3:98923646-98923665 Msa0968450:intron 25.0%
!!! TTGCTAATGAATTTTTTGGA+AGG + chr6_3:98923650-98923669 Msa0968450:intron 25.0%
! TTTGGAAGGAAAAACAATTT+AGG + chr6_3:98923664-98923683 Msa0968450:intron 25.0%
!! ATATGAATTTGACTTCATGA+GGG + chr6_3:98924099-98924118 Msa0968450:CDS 25.0%
! ACAGAATATGTAAGATGATT+TGG - chr6_3:98924229-98924248 None:intergenic 25.0%
! ATGACATGTTAAATGAAAGT+TGG + chr6_3:98924346-98924365 Msa0968450:intron 25.0%
! AAGCAAAGAAATAAAATGCA+TGG - chr6_3:98924396-98924415 None:intergenic 25.0%
! TTTCGTAACATATAGTATAG+CGG - chr6_3:98924592-98924611 None:intergenic 25.0%
! TTATGTTACACAAGAAATCT+TGG + chr6_3:98924683-98924702 Msa0968450:intron 25.0%
! CTAGTTATGGAATATATTGA+CGG + chr6_3:98924846-98924865 Msa0968450:CDS 25.0%
! TAGTTATGGAATATATTGAC+GGG + chr6_3:98924847-98924866 Msa0968450:CDS 25.0%
! GTTAAACCAAAACATAAGTA+GGG - chr6_3:98924990-98925009 None:intergenic 25.0%
! AGTTAAACCAAAACATAAGT+AGG - chr6_3:98924991-98925010 None:intergenic 25.0%
! AAGTTAAACTACATGAAAGA+AGG - chr6_3:98925114-98925133 None:intergenic 25.0%
! AGAAAATGGGTAAAAGATAT+GGG - chr6_3:98925186-98925205 None:intergenic 25.0%
!!! TACTAAGCTTTAAGAAAATG+GGG - chr6_3:98925351-98925370 None:intergenic 25.0%
!!! CTTACTAAGCTTTAAGAAAA+TGG - chr6_3:98925353-98925372 None:intergenic 25.0%
! TAGGATTACTTTGTAATCTT+AGG + chr6_3:98925453-98925472 Msa0968450:intron 25.0%
! CCTAAGAAAATAGAGAAATT+GGG - chr6_3:98925529-98925548 None:intergenic 25.0%
! TCCTAAGAAAATAGAGAAAT+TGG - chr6_3:98925530-98925549 None:intergenic 25.0%
!! TTCTCTATTTTCTTAGGATT+AGG + chr6_3:98925532-98925551 Msa0968450:intron 25.0%
!! TATAAATAGTGGTTTGTGTT+CGG + chr6_3:98925568-98925587 Msa0968450:intron 25.0%
! AAAACAAATGTGATGAATCT+TGG + chr6_3:98925794-98925813 Msa0968450:intron 25.0%
! ATTGCATACCTAAATAACTT+CGG + chr6_3:98925843-98925862 Msa0968450:intron 25.0%
! TGTAATGAATCTTTCAGAAA+AGG - chr6_3:98925930-98925949 None:intergenic 25.0%
! TGAAACTACATACATAAGTA+TGG - chr6_3:98925964-98925983 None:intergenic 25.0%
!!! GTCAAATGATTTTGAAAAGT+GGG + chr6_3:98926053-98926072 Msa0968450:CDS 25.0%
!!! ACACCGATTTAATAAACAAT+AGG - chr6_3:98926199-98926218 None:intergenic 25.0%
! GAAAAATACAAATATTAGGG+TGG - chr6_3:98926322-98926341 None:intergenic 25.0%
! CCAGGAAAAATACAAATATT+AGG - chr6_3:98926326-98926345 None:intergenic 25.0%
!! CCTAATATTTGTATTTTTCC+TGG + chr6_3:98926323-98926342 Msa0968450:intron 25.0%
!! ATTTTGCTGGGAATAAATAA+TGG + chr6_3:98926583-98926602 Msa0968450:intron 25.0%
!! ATTTCTGTTTCTTCTTACTT+CGG - chr6_3:98926726-98926745 None:intergenic 25.0%
! AGAAATATAGATATGATGGT+AGG + chr6_3:98926740-98926759 Msa0968450:intron 25.0%
! GAAATATAGATATGATGGTA+GGG + chr6_3:98926741-98926760 Msa0968450:intron 25.0%
! AAATATAGATATGATGGTAG+GGG + chr6_3:98926742-98926761 Msa0968450:intron 25.0%
! AGTGTTAGGATATAGAATAT+AGG + chr6_3:98926776-98926795 Msa0968450:intron 25.0%
! GATATAGAATATAGGTCTAT+TGG + chr6_3:98926784-98926803 Msa0968450:intron 25.0%
!!! AAGTTAGTAAGTTGATAAGT+TGG + chr6_3:98926830-98926849 Msa0968450:intron 25.0%
!! TATGTTAAGAACCTTACTTT+TGG - chr6_3:98927199-98927218 None:intergenic 25.0%
! AAGTAAGGTTCTTAACATAA+AGG + chr6_3:98927200-98927219 Msa0968450:intron 25.0%
! AGTAAGGTTCTTAACATAAA+GGG + chr6_3:98927201-98927220 Msa0968450:intron 25.0%
! TTATATTAATATAGGGCTTG+TGG - chr6_3:98927321-98927340 None:intergenic 25.0%
!!! AAGAAGACAAATTTAGCTTT+AGG - chr6_3:98927420-98927439 None:intergenic 25.0%
! AACTTAGATTATGTGAAACA+TGG + chr6_3:98927503-98927522 Msa0968450:intron 25.0%
!! ATTGAAGATTCTTCTGAAAA+CGG - chr6_3:98927761-98927780 None:intergenic 25.0%
! TGTAAGAAGTAAGAACAATT+TGG + chr6_3:98927920-98927939 Msa0968450:intron 25.0%
!!! CAATTTGGTTTTATAATCAG+GGG + chr6_3:98927935-98927954 Msa0968450:intron 25.0%
!! AAGAACTGTTTTCTATACTT+CGG + chr6_3:98928439-98928458 Msa0968450:CDS 25.0%
!! ACTTTAATTTCTGCGTTTTG+GGG - chr6_3:98920049-98920068 None:intergenic 30.0%
!! CACTTTAATTTCTGCGTTTT+GGG - chr6_3:98920050-98920069 None:intergenic 30.0%
! AAGTAACGTTTTCAAAAGTG+TGG - chr6_3:98920102-98920121 None:intergenic 30.0%
GCACATAGAGAAAATCTTAT+CGG - chr6_3:98920515-98920534 None:intergenic 30.0%
ATTCAGATTGCGCAAATTAT+TGG + chr6_3:98920650-98920669 Msa0968450:intron 30.0%
TTCAGATTGCGCAAATTATT+GGG + chr6_3:98920651-98920670 Msa0968450:intron 30.0%
TTAACAGTGTGATAAGAAGT+TGG - chr6_3:98920740-98920759 None:intergenic 30.0%
!! GCATAAACAAAAGTACTTGA+GGG - chr6_3:98920882-98920901 None:intergenic 30.0%
!! TGCATAAACAAAAGTACTTG+AGG - chr6_3:98920883-98920902 None:intergenic 30.0%
ATATGTTATGACACTAGTTG+AGG + chr6_3:98920913-98920932 Msa0968450:intron 30.0%
! TAACAATTTAAGTTTACCGG+AGG + chr6_3:98920937-98920956 Msa0968450:intron 30.0%
! AACAATTTAAGTTTACCGGA+GGG + chr6_3:98920938-98920957 Msa0968450:intron 30.0%
CTTATAGTATTTGGACCAAA+AGG + chr6_3:98921203-98921222 Msa0968450:intron 30.0%
CGCTGCTAAAAATCAATATT+GGG - chr6_3:98922029-98922048 None:intergenic 30.0%
ACGCTGCTAAAAATCAATAT+TGG - chr6_3:98922030-98922049 None:intergenic 30.0%
!!! TGAAAACGTTTTGTTTCTTG+GGG + chr6_3:98922078-98922097 Msa0968450:intron 30.0%
CAAAAGACATATCAGTTACA+TGG - chr6_3:98922200-98922219 None:intergenic 30.0%
AGACAAATCTTATGAATGCA+TGG + chr6_3:98922285-98922304 Msa0968450:intron 30.0%
GATAGCATGTTAATCAAAGA+AGG + chr6_3:98922585-98922604 Msa0968450:intron 30.0%
TCAAAGAAGGAACACATTAT+TGG + chr6_3:98922598-98922617 Msa0968450:intron 30.0%
! TTTTGCTTATAATAGTGACC+GGG + chr6_3:98922804-98922823 Msa0968450:intron 30.0%
AGAAACAAATCGGATACTAT+TGG - chr6_3:98922956-98922975 None:intergenic 30.0%
! TGAAAGCACAAGAAACAAAT+CGG - chr6_3:98922966-98922985 None:intergenic 30.0%
ACTCACGGTAAAAAAAAGAA+GGG + chr6_3:98923073-98923092 Msa0968450:intron 30.0%
TGTGTTGTATTATTCGAGTA+TGG + chr6_3:98923107-98923126 Msa0968450:intron 30.0%
AAAAGTGGGAAGTAATATAG+GGG - chr6_3:98923266-98923285 None:intergenic 30.0%
GAAAAAGTGGGAAGTAATAT+AGG - chr6_3:98923268-98923287 None:intergenic 30.0%
TACATGTATGCAGAAAAAGT+GGG - chr6_3:98923280-98923299 None:intergenic 30.0%
ATACATGTATGCAGAAAAAG+TGG - chr6_3:98923281-98923300 None:intergenic 30.0%
ACATGAACTTTACCAAACAT+AGG + chr6_3:98923378-98923397 Msa0968450:intron 30.0%
! TTAACATTTGGTCCTTTTGT+GGG + chr6_3:98923427-98923446 Msa0968450:intron 30.0%
CTCAACTTAATGTTTGTTTG+AGG + chr6_3:98923510-98923529 Msa0968450:intron 30.0%
AATTAAACAAACATTCGCAC+AGG - chr6_3:98923547-98923566 None:intergenic 30.0%
! AGCAATATTTTCGTAGAGTT+AGG - chr6_3:98923598-98923617 None:intergenic 30.0%
GCTCTTTATCTAGAAAAAAG+AGG - chr6_3:98923778-98923797 None:intergenic 30.0%
TTGCTGTCATAAACAGATAA+AGG - chr6_3:98923884-98923903 None:intergenic 30.0%
ATAAACTAAAGGGTAGCAAA+GGG - chr6_3:98923944-98923963 None:intergenic 30.0%
! ATCATTGTGCTTCTTTTCTA+TGG + chr6_3:98923984-98924003 Msa0968450:intron 30.0%
TTTCTATGGTTATTGCTTCA+TGG + chr6_3:98923998-98924017 Msa0968450:intron 30.0%
TCATGGTCATGTTAATATTG+TGG + chr6_3:98924015-98924034 Msa0968450:intron 30.0%
! GATATGAATTTGACTTCATG+AGG + chr6_3:98924098-98924117 Msa0968450:CDS 30.0%
TTATACGTGATATGGTTACT+AGG + chr6_3:98924197-98924216 Msa0968450:CDS 30.0%
!! CAGTTAGATATTTAGGGTTT+TGG + chr6_3:98924426-98924445 Msa0968450:intron 30.0%
GCTATACTATATGTTACGAA+AGG + chr6_3:98924591-98924610 Msa0968450:intron 30.0%
GGCCTTTATTGATAAAAACA+AGG + chr6_3:98924612-98924631 Msa0968450:intron 30.0%
AAGTCTTTATTCAGATGCAT+TGG + chr6_3:98924754-98924773 Msa0968450:intron 30.0%
GCTTCTTTAATTGTACAGAA+AGG + chr6_3:98924821-98924840 Msa0968450:intron 30.0%
CGTCAATATATTCCATAACT+AGG - chr6_3:98924848-98924867 None:intergenic 30.0%
AATATCATAAGTCAGAGTAC+TGG - chr6_3:98925023-98925042 None:intergenic 30.0%
GTAAGAAAGTGATTGGAATT+AGG - chr6_3:98925151-98925170 None:intergenic 30.0%
GAGAAAATGGGTAAAAGATA+TGG - chr6_3:98925187-98925206 None:intergenic 30.0%
! AGATAGTGTTGAGAGAAAAT+GGG - chr6_3:98925199-98925218 None:intergenic 30.0%
! AAGATAGTGTTGAGAGAAAA+TGG - chr6_3:98925200-98925219 None:intergenic 30.0%
! TTATGTCATGGAAAGTTGAT+TGG + chr6_3:98925286-98925305 Msa0968450:intron 30.0%
! CCCAATTTCTCTATTTTCTT+AGG + chr6_3:98925526-98925545 Msa0968450:intron 30.0%
GTAGTAAATTGATACTACCT+TGG - chr6_3:98925614-98925633 None:intergenic 30.0%
! ATTGGAGCTTTTCAGATTAT+TGG - chr6_3:98925636-98925655 None:intergenic 30.0%
AAGAGGATGAGAGAAATAAT+TGG - chr6_3:98925654-98925673 None:intergenic 30.0%
ATAGATTATGTTGACGTTGT+GGG - chr6_3:98925685-98925704 None:intergenic 30.0%
TATAGATTATGTTGACGTTG+TGG - chr6_3:98925686-98925705 None:intergenic 30.0%
TTGCATACCTAAATAACTTC+GGG + chr6_3:98925844-98925863 Msa0968450:intron 30.0%
TTACACCGTTAACATTCTTA+TGG + chr6_3:98925990-98926009 Msa0968450:intron 30.0%
TACACCGTTAACATTCTTAT+GGG + chr6_3:98925991-98926010 Msa0968450:intron 30.0%
!! GGTCAAATGATTTTGAAAAG+TGG + chr6_3:98926052-98926071 Msa0968450:CDS 30.0%
TTACAAATCAGGATATTTCC+TGG - chr6_3:98926100-98926119 None:intergenic 30.0%
! GGAAATATCCTGATTTGTAA+AGG + chr6_3:98926100-98926119 Msa0968450:CDS 30.0%
!! AGTGTTATTTCATCTCTCTA+TGG + chr6_3:98926165-98926184 Msa0968450:intron 30.0%
!!! AAATCGGTGTTTTAATCAAG+AGG + chr6_3:98926209-98926228 Msa0968450:intron 30.0%
TAATCAAGAGGAATCACATA+TGG + chr6_3:98926221-98926240 Msa0968450:intron 30.0%
ATCACATATGGAAATGACTT+AGG + chr6_3:98926233-98926252 Msa0968450:intron 30.0%
TCACATATGGAAATGACTTA+GGG + chr6_3:98926234-98926253 Msa0968450:intron 30.0%
! TTTGTATTTTTCCTGGATTC+AGG + chr6_3:98926330-98926349 Msa0968450:intron 30.0%
TACTGTTATTCTCATACTCT+TGG + chr6_3:98926472-98926491 Msa0968450:intron 30.0%
TGCTTCTTCTCTTATATTTG+TGG + chr6_3:98926503-98926522 Msa0968450:intron 30.0%
AATAAATAATGAAAGCGAGG+AGG + chr6_3:98926670-98926689 Msa0968450:intron 30.0%
!! AGTAAGTTGATAAGTTGGTT+TGG + chr6_3:98926835-98926854 Msa0968450:intron 30.0%
GTCATTAAATAGCCTTCAAT+TGG + chr6_3:98926902-98926921 Msa0968450:intron 30.0%
GTCAATTGAATGGGATAATA+GGG - chr6_3:98927057-98927076 None:intergenic 30.0%
TGTCAATTGAATGGGATAAT+AGG - chr6_3:98927058-98927077 None:intergenic 30.0%
TCTGTTACTGTCAATTGAAT+GGG - chr6_3:98927066-98927085 None:intergenic 30.0%
TTCTGTTACTGTCAATTGAA+TGG - chr6_3:98927067-98927086 None:intergenic 30.0%
CTTTCCATATACCAAAAGTA+AGG + chr6_3:98927185-98927204 Msa0968450:intron 30.0%
!! AGAACCTTACTTTTGGTATA+TGG - chr6_3:98927192-98927211 None:intergenic 30.0%
! GATTTTGCGACTAATGTTTA+CGG - chr6_3:98927362-98927381 None:intergenic 30.0%
!! AGACAAATTTAGCTTTAGGA+AGG - chr6_3:98927416-98927435 None:intergenic 30.0%
TGATTTAGCAATTATCCCTA+TGG - chr6_3:98927484-98927503 None:intergenic 30.0%
AATTGAGAATGATAGCTGAT+CGG + chr6_3:98927568-98927587 Msa0968450:intron 30.0%
TTTGATACAAAATTACCTCC+TGG + chr6_3:98927719-98927738 Msa0968450:CDS 30.0%
ATCAAGGATGTGTAATCTTT+GGG - chr6_3:98927841-98927860 None:intergenic 30.0%
! TCTCTTTTATCTGAGTTTTG+TGG + chr6_3:98928195-98928214 Msa0968450:intron 30.0%
CTCATTAACAGATTAGTAGA+TGG + chr6_3:98928241-98928260 Msa0968450:intron 30.0%
! ATTTAGCGAGAAAAAGGTAT+CGG - chr6_3:98928382-98928401 None:intergenic 30.0%
TAAATATATATTCCTGTGCC+TGG + chr6_3:98928397-98928416 Msa0968450:intron 30.0%
AGTATAGAAAACAGTTCTTC+TGG - chr6_3:98928438-98928457 None:intergenic 30.0%
TGGAATCAATTATTCTTGTG+CGG + chr6_3:98928497-98928516 Msa0968450:CDS 30.0%
! TTGGCCAAACTTCATTCTTT+TGG - chr6_3:98920011-98920030 None:intergenic 35.0%
!! GCACTTTAATTTCTGCGTTT+TGG - chr6_3:98920051-98920070 None:intergenic 35.0%
TTGAATAGGACGAAACTGAA+CGG - chr6_3:98920232-98920251 None:intergenic 35.0%
AACTGAAAGGAACGTTGAAT+AGG - chr6_3:98920246-98920265 None:intergenic 35.0%
CGAGCAATTGATATTTACAC+CGG + chr6_3:98920273-98920292 Msa0968450:CDS 35.0%
TGATATTTACACCGGATACA+AGG + chr6_3:98920281-98920300 Msa0968450:CDS 35.0%
TCGTAGTATAATAAACCCTC+CGG - chr6_3:98920956-98920975 None:intergenic 35.0%
CAATGTTTCAGTGTTGTGTT+TGG - chr6_3:98921009-98921028 None:intergenic 35.0%
AATAATAGAGGGGGAATGAA+TGG + chr6_3:98921241-98921260 Msa0968450:intron 35.0%
GAATGAATGGTAACACCTTT+GGG + chr6_3:98921254-98921273 Msa0968450:intron 35.0%
AACATTATTGCAAGTCACAC+AGG - chr6_3:98921304-98921323 None:intergenic 35.0%
! GATGTCAGTCTAGAATAAAC+AGG - chr6_3:98921361-98921380 None:intergenic 35.0%
!! CTGACATCTTTGTTGTTTGT+TGG + chr6_3:98921373-98921392 Msa0968450:intron 35.0%
! TGTTTGTTGGTTGTTTGTCA+TGG + chr6_3:98921386-98921405 Msa0968450:intron 35.0%
! GTTTGTTGGTTGTTTGTCAT+GGG + chr6_3:98921387-98921406 Msa0968450:intron 35.0%
! ATGATAGTGAATTGTGACCA+TGG - chr6_3:98921631-98921650 None:intergenic 35.0%
GTTAATCAAGGGTGACAATT+TGG + chr6_3:98921808-98921827 Msa0968450:intron 35.0%
CCAATGCTATTCACTCTAAT+CGG + chr6_3:98921916-98921935 Msa0968450:intron 35.0%
! GCGTAGATCTGTTTTCTTAA+TGG + chr6_3:98922046-98922065 Msa0968450:intron 35.0%
ATGACATATAAATCCACACG+AGG + chr6_3:98922118-98922137 Msa0968450:intron 35.0%
TGACATATAAATCCACACGA+GGG + chr6_3:98922119-98922138 Msa0968450:intron 35.0%
GTTCATAAAGCAAGACTGAA+AGG + chr6_3:98922226-98922245 Msa0968450:CDS 35.0%
CAAAAGTGATGTTGTTGTCA+AGG + chr6_3:98922252-98922271 Msa0968450:CDS 35.0%
TGATTTACTTTGCATGCAAC+AGG + chr6_3:98922327-98922346 Msa0968450:intron 35.0%
! TGATCTATATTCGGTGACAA+AGG + chr6_3:98922441-98922460 Msa0968450:CDS 35.0%
! ATATTCGGTGACAAAGGAAA+TGG + chr6_3:98922447-98922466 Msa0968450:CDS 35.0%
GTAAACAAACCCACAAAACA+GGG - chr6_3:98922557-98922576 None:intergenic 35.0%
AGTAAACAAACCCACAAAAC+AGG - chr6_3:98922558-98922577 None:intergenic 35.0%
! TTGTGGGTTTGTTTACTGAT+AGG + chr6_3:98922561-98922580 Msa0968450:intron 35.0%
CATTAAATGAGGGATGTATG+TGG - chr6_3:98922768-98922787 None:intergenic 35.0%
TTTGCTTATAATAGTGACCG+GGG + chr6_3:98922805-98922824 Msa0968450:intron 35.0%
TGACTACTAGAAACATGATG+TGG + chr6_3:98922877-98922896 Msa0968450:intron 35.0%
CACTCACGGTAAAAAAAAGA+AGG + chr6_3:98923072-98923091 Msa0968450:intron 35.0%
TATAAAATTTAGGCTAGGGG+TGG - chr6_3:98923169-98923188 None:intergenic 35.0%
AAAGTGGGAAGTAATATAGG+GGG - chr6_3:98923265-98923284 None:intergenic 35.0%
! GTTAACATTTGGTCCTTTTG+TGG + chr6_3:98923426-98923445 Msa0968450:intron 35.0%
! AAAACAATTTAGGCTCTAGC+AGG + chr6_3:98923674-98923693 Msa0968450:intron 35.0%
GATAAACTAAAGGGTAGCAA+AGG - chr6_3:98923945-98923964 None:intergenic 35.0%
TAGAAGTTCAGAACTAGTCA+TGG - chr6_3:98924057-98924076 None:intergenic 35.0%
! TCTAATCTTTTCCATTGCAC+TGG - chr6_3:98924128-98924147 None:intergenic 35.0%
ACCATATCACGTATAACTCT+TGG - chr6_3:98924193-98924212 None:intergenic 35.0%
GTAACATATAGTATAGCGGT+TGG - chr6_3:98924588-98924607 None:intergenic 35.0%
CACAAGAAATCTTGGTCAAA+TGG + chr6_3:98924691-98924710 Msa0968450:intron 35.0%
TCATCACCAAGGTTCATTAT+TGG - chr6_3:98924876-98924895 None:intergenic 35.0%
GTGATTGGAATTAGGAAGAA+AGG - chr6_3:98925143-98925162 None:intergenic 35.0%
!! TAACTGACTAACTTGCTGAT+GGG - chr6_3:98925269-98925288 None:intergenic 35.0%
!! ATAACTGACTAACTTGCTGA+TGG - chr6_3:98925270-98925289 None:intergenic 35.0%
CAAGTTAGTCAGTTATGTCA+TGG + chr6_3:98925274-98925293 Msa0968450:intron 35.0%
!! CTTAGTAAGCTTTAGCTTGA+GGG + chr6_3:98925364-98925383 Msa0968450:intron 35.0%
AGTATCTTGGTTTATCTCGT+AGG + chr6_3:98925434-98925453 Msa0968450:intron 35.0%
GTAATCTTAGGTTATCTCCT+AGG + chr6_3:98925465-98925484 Msa0968450:intron 35.0%
ATGATTCTCCAATCAACAAG+TGG + chr6_3:98925764-98925783 Msa0968450:intron 35.0%
! TAGTCATACCACTTGTTGAT+TGG - chr6_3:98925775-98925794 None:intergenic 35.0%
GACATTACCCGAAGTTATTT+AGG - chr6_3:98925854-98925873 None:intergenic 35.0%
ATGAATCTTTCAGAAAAGGC+TGG - chr6_3:98925926-98925945 None:intergenic 35.0%
!! ACTTTGAAGAATTTTCCTGC+AGG - chr6_3:98926017-98926036 None:intergenic 35.0%
CAAAGTTTGACTCTAGCATA+TGG + chr6_3:98926031-98926050 Msa0968450:CDS 35.0%
GAGAGATGAAATAACACTGA+AGG - chr6_3:98926163-98926182 None:intergenic 35.0%
CACATATGGAAATGACTTAG+GGG + chr6_3:98926235-98926254 Msa0968450:intron 35.0%
AACTAGTGCAGTTTGTAACT+TGG - chr6_3:98926563-98926582 None:intergenic 35.0%
!! AACTGCACTAGTTATTTTGC+TGG + chr6_3:98926570-98926589 Msa0968450:intron 35.0%
!! ACTGCACTAGTTATTTTGCT+GGG + chr6_3:98926571-98926590 Msa0968450:intron 35.0%
! AATAAATAATGGAAGCGAGG+AGG + chr6_3:98926594-98926613 Msa0968450:intron 35.0%
CCAGCAAAATCTTCTTACTT+CGG - chr6_3:98926649-98926668 None:intergenic 35.0%
! CGAAGTAAGAAGATTTTGCT+GGG + chr6_3:98926647-98926666 Msa0968450:intron 35.0%
GGGAATAAATAATGAAAGCG+AGG + chr6_3:98926667-98926686 Msa0968450:intron 35.0%
! GGGAGAAAAGATAAAGTGTT+AGG + chr6_3:98926762-98926781 Msa0968450:intron 35.0%
AAATAGCCTTCAATTGGTAG+AGG + chr6_3:98926908-98926927 Msa0968450:intron 35.0%
AATAGCCTTCAATTGGTAGA+GGG + chr6_3:98926909-98926928 Msa0968450:intron 35.0%
GTTGAAAGAGAAGATGCAAA+AGG - chr6_3:98927035-98927054 None:intergenic 35.0%
! TATTCATTTCTGCCCAGTTT+TGG + chr6_3:98927157-98927176 Msa0968450:intron 35.0%
! ATTCATTTCTGCCCAGTTTT+GGG + chr6_3:98927158-98927177 Msa0968450:intron 35.0%
TGGAAAGAATTCCCAAAACT+GGG - chr6_3:98927172-98927191 None:intergenic 35.0%
ATGGAAAGAATTCCCAAAAC+TGG - chr6_3:98927173-98927192 None:intergenic 35.0%
TCTTAACATAAAGGGAATGC+TGG + chr6_3:98927209-98927228 Msa0968450:intron 35.0%
GTTTACGGTACAATTCAATC+AGG - chr6_3:98927347-98927366 None:intergenic 35.0%
TTTAGGAAGGTCATTGACAA+AGG - chr6_3:98927403-98927422 None:intergenic 35.0%
TGAAACATGGACTTCATTGA+AGG + chr6_3:98927516-98927535 Msa0968450:intron 35.0%
! GTAATCTTTGGGAACAAACA+TGG - chr6_3:98927830-98927849 None:intergenic 35.0%
CATCAAGGATGTGTAATCTT+TGG - chr6_3:98927842-98927861 None:intergenic 35.0%
!!! TGGTTTTATAATCAGGGGAT+AGG + chr6_3:98927940-98927959 Msa0968450:intron 35.0%
!! GGTTTTATAATCAGGGGATA+GGG + chr6_3:98927941-98927960 Msa0968450:intron 35.0%
! GTTTTATAATCAGGGGATAG+GGG + chr6_3:98927942-98927961 Msa0968450:intron 35.0%
TAGGACAGTAAAAATTTGCC+AGG + chr6_3:98927966-98927985 Msa0968450:intron 35.0%
TATGCATAGAAGTTAACCCA+AGG + chr6_3:98928033-98928052 Msa0968450:intron 35.0%
AAGTTAACCCAAGGAAACTA+AGG + chr6_3:98928042-98928061 Msa0968450:intron 35.0%
AGTTAACCCAAGGAAACTAA+GGG + chr6_3:98928043-98928062 Msa0968450:intron 35.0%
TATGTATACATCAATTGGCG+TGG - chr6_3:98928303-98928322 None:intergenic 35.0%
TTTATAGTCATGGAACAAGC+AGG + chr6_3:98928332-98928351 Msa0968450:intron 35.0%
GAATGAAGTTTGGCCAACTA+TGG + chr6_3:98920014-98920033 Msa0968450:five_prime_UTR 40.0%
TGCAAGTGAAAATCGCAACA+TGG + chr6_3:98920068-98920087 Msa0968450:five_prime_UTR 40.0%
TTCAACGTTCCTTTCAGTTC+TGG + chr6_3:98920247-98920266 Msa0968450:CDS 40.0%
TCAACGTTCCTTTCAGTTCT+GGG + chr6_3:98920248-98920267 Msa0968450:CDS 40.0%
AGAGAAAGGAACCTTGTATC+CGG - chr6_3:98920295-98920314 None:intergenic 40.0%
! GCTTCATTTTCACGAATTGC+AGG + chr6_3:98920411-98920430 Msa0968450:intron 40.0%
ACAGAAGCAAGAAGCAATGT+GGG + chr6_3:98920468-98920487 Msa0968450:CDS 40.0%
AATTATTGGGAAGCCGGATT+TGG + chr6_3:98920664-98920683 Msa0968450:CDS 40.0%
ACAGTGTGATAAGAAGTTGG+TGG - chr6_3:98920737-98920756 None:intergenic 40.0%
AGATTTGATGTTGAGCCTCT+TGG + chr6_3:98920809-98920828 Msa0968450:CDS 40.0%
ACAAACCTGAGCAATTGAAG+CGG - chr6_3:98920837-98920856 None:intergenic 40.0%
TTGACTGTAACCACATGTGT+CGG + chr6_3:98921061-98921080 Msa0968450:intron 40.0%
AGTCAAGATTGAAGTGTGTC+CGG - chr6_3:98921097-98921116 None:intergenic 40.0%
AACTCAGCTAGTATACAGAG+TGG + chr6_3:98921126-98921145 Msa0968450:intron 40.0%
CTCAAGTTATTGTGTAGCTG+AGG + chr6_3:98921178-98921197 Msa0968450:intron 40.0%
GCTGAGGAGCTTATAGTATT+TGG + chr6_3:98921194-98921213 Msa0968450:intron 40.0%
GGAATGAATGGTAACACCTT+TGG + chr6_3:98921253-98921272 Msa0968450:intron 40.0%
! AATGGTAACACCTTTGGGAA+CGG + chr6_3:98921259-98921278 Msa0968450:intron 40.0%
TTATTGCAAGTCACACAGGT+AGG - chr6_3:98921300-98921319 None:intergenic 40.0%
TGTCATGGGTGGTATTTGAT+CGG + chr6_3:98921401-98921420 Msa0968450:intron 40.0%
TCATAGAGCTGTGTGATGAT+TGG + chr6_3:98921513-98921532 Msa0968450:intron 40.0%
CATAGAGCTGTGTGATGATT+GGG + chr6_3:98921514-98921533 Msa0968450:intron 40.0%
CTGAGGTATATTTGAATGGG+TGG + chr6_3:98921547-98921566 Msa0968450:intron 40.0%
GTATATTTGAATGGGTGGAC+TGG + chr6_3:98921552-98921571 Msa0968450:intron 40.0%
!!! CACTCTTTTGAAGTGAAGCT+TGG + chr6_3:98921725-98921744 Msa0968450:intron 40.0%
GTGAAAATAGCACACATAGC+AGG - chr6_3:98921856-98921875 None:intergenic 40.0%
CCGATTAGAGTGAATAGCAT+TGG - chr6_3:98921919-98921938 None:intergenic 40.0%
ATGCTATTCACTCTAATCGG+TGG + chr6_3:98921919-98921938 Msa0968450:intron 40.0%
GACAAAGGAAATGGAAACAC+AGG + chr6_3:98922456-98922475 Msa0968450:CDS 40.0%
GTACTATTTACTACTCCCTC+CGG + chr6_3:98922672-98922691 Msa0968450:intron 40.0%
TGCTTATAATAGTGACCGGA+GGG - chr6_3:98922690-98922709 None:intergenic 40.0%
TTGCTTATAATAGTGACCGG+AGG - chr6_3:98922806-98922825 None:intergenic 40.0%
TTGCTTATAATAGTGACCGG+GGG + chr6_3:98922806-98922825 Msa0968450:intron 40.0%
! ATCCTGTCTCTGGAGAAAAA+GGG - chr6_3:98923036-98923055 None:intergenic 40.0%
! CGAGTATGGTGATGAAAGAA+TGG + chr6_3:98923121-98923140 Msa0968450:intron 40.0%
TGGATGATACTCCGATAAAG+AGG + chr6_3:98923141-98923160 Msa0968450:intron 40.0%
GAAGTTCTGTTAGGGACTTA+GGG - chr6_3:98923243-98923262 None:intergenic 40.0%
TATAGGGGGAAGTTCTGTTA+GGG - chr6_3:98923251-98923270 None:intergenic 40.0%
ATATAGGGGGAAGTTCTGTT+AGG - chr6_3:98923252-98923271 None:intergenic 40.0%
AAAGAATACCTGGGAGATAG+GGG - chr6_3:98923321-98923340 None:intergenic 40.0%
CAAAGAATACCTGGGAGATA+GGG - chr6_3:98923322-98923341 None:intergenic 40.0%
ACAAAGAATACCTGGGAGAT+AGG - chr6_3:98923323-98923342 None:intergenic 40.0%
! TATTCTTTGTCCTCCCCTTT+TGG + chr6_3:98923333-98923352 Msa0968450:intron 40.0%
CAGACAATCAAACCCACAAA+AGG - chr6_3:98923442-98923461 None:intergenic 40.0%
! CTTTTGTGGGTTTGATTGTC+TGG + chr6_3:98923440-98923459 Msa0968450:intron 40.0%
GTGTAATTTGAACCTCAACC+TGG + chr6_3:98923572-98923591 Msa0968450:intron 40.0%
! TATTTTCGTAGAGTTAGGCC+AGG - chr6_3:98923593-98923612 None:intergenic 40.0%
! AAAGGGTAGCAAAGGGTTTT+AGG - chr6_3:98923937-98923956 None:intergenic 40.0%
AACTAGTCATGGTAGATTGC+TGG - chr6_3:98924046-98924065 None:intergenic 40.0%
! TGAATTTGACTTCATGAGGG+AGG + chr6_3:98924102-98924121 Msa0968450:CDS 40.0%
ATAACTCTTGGCACCAAAAC+AGG - chr6_3:98924181-98924200 None:intergenic 40.0%
GCCAAGAGTTATACGTGATA+TGG + chr6_3:98924189-98924208 Msa0968450:CDS 40.0%
GTACAGAAAGGTCCTAGTTA+TGG + chr6_3:98924833-98924852 Msa0968450:intron 40.0%
GGGATTCCAATAATGAACCT+TGG + chr6_3:98924867-98924886 Msa0968450:CDS 40.0%
! TCTTCGCTATTTCATCACCA+AGG - chr6_3:98924887-98924906 None:intergenic 40.0%
GAGGAGAGTAAGAAAGTGAT+TGG - chr6_3:98925158-98925177 None:intergenic 40.0%
!! AACTGACTAACTTGCTGATG+GGG - chr6_3:98925268-98925287 None:intergenic 40.0%
ATGGGGTTACTTCCATGTAT+AGG - chr6_3:98925334-98925353 None:intergenic 40.0%
!! GCTTAGTAAGCTTTAGCTTG+AGG + chr6_3:98925363-98925382 Msa0968450:intron 40.0%
TGGTAGTAGCTTGATGCAAA+AGG - chr6_3:98925594-98925613 None:intergenic 40.0%
TTTGCATCAAGCTACTACCA+AGG + chr6_3:98925594-98925613 Msa0968450:intron 40.0%
!!! CGTTGTGGGTTTTAGATAAG+AGG - chr6_3:98925671-98925690 None:intergenic 40.0%
CAGGCCCATAAGAATGTTAA+CGG - chr6_3:98925998-98926017 None:intergenic 40.0%
ATCAGGATATTTCCTGGATG+AGG - chr6_3:98926094-98926113 None:intergenic 40.0%
CCTCTGATCCTTTACAAATC+AGG - chr6_3:98926111-98926130 None:intergenic 40.0%
! CCTGATTTGTAAAGGATCAG+AGG + chr6_3:98926108-98926127 Msa0968450:CDS 40.0%
! GGGAATAAATAATGGAAGCG+AGG + chr6_3:98926591-98926610 Msa0968450:intron 40.0%
! CCGAAGTAAGAAGATTTTGC+TGG + chr6_3:98926646-98926665 Msa0968450:intron 40.0%
ATAGCCTTCAATTGGTAGAG+GGG + chr6_3:98926910-98926929 Msa0968450:intron 40.0%
AGATGATAACCTTGCACTCA+AGG - chr6_3:98927011-98927030 None:intergenic 40.0%
GCAACAAGAAATGCTTAAGC+TGG + chr6_3:98927685-98927704 Msa0968450:CDS 40.0%
TACACATCCTTGATGTGACA+CGG + chr6_3:98927847-98927866 Msa0968450:intron 40.0%
CAATGTGCAACAAAATGACC+TGG - chr6_3:98927987-98928006 None:intergenic 40.0%
GTTAACCCAAGGAAACTAAG+GGG + chr6_3:98928044-98928063 Msa0968450:intron 40.0%
TTAACCCAAGGAAACTAAGG+GGG + chr6_3:98928045-98928064 Msa0968450:intron 40.0%
!! TTATCTGAGTTTTGTGGCAC+TGG + chr6_3:98928201-98928220 Msa0968450:intron 40.0%
TATATTCCTGTGCCTGGTTA+TGG + chr6_3:98928403-98928422 Msa0968450:intron 40.0%
ATTATTCTTGTGCGGAACAG+TGG + chr6_3:98928505-98928524 Msa0968450:CDS 40.0%
TCTCAAGCTGGCAGATTTAA+AGG + chr6_3:98928552-98928571 Msa0968450:CDS 40.0%
TTTGGCCAACTATGGTTGTG+AGG + chr6_3:98920022-98920041 Msa0968450:five_prime_UTR 45.0%
TTGAGATCAACGACGATAGG+GGG - chr6_3:98920189-98920208 None:intergenic 45.0%
GTTGAGATCAACGACGATAG+GGG - chr6_3:98920190-98920209 None:intergenic 45.0%
CGTTGAGATCAACGACGATA+GGG - chr6_3:98920191-98920210 None:intergenic 45.0%
TCGTTGAGATCAACGACGAT+AGG - chr6_3:98920192-98920211 None:intergenic 45.0%
AGAGAGAGAGAGAGAGAGAA+AGG - chr6_3:98920309-98920328 None:intergenic 45.0%
CACAGAAGCAAGAAGCAATG+TGG + chr6_3:98920467-98920486 Msa0968450:CDS 45.0%
TTCTCTATGTGCTCTGACCT+TGG + chr6_3:98920523-98920542 Msa0968450:CDS 45.0%
TGCGCAAATTATTGGGAAGC+CGG + chr6_3:98920658-98920677 Msa0968450:CDS 45.0%
! TGTGTTTGGTCTTCGATGTC+TGG - chr6_3:98920995-98921014 None:intergenic 45.0%
TCAAGATTGAAGTGTGTCCG+GGG - chr6_3:98921095-98921114 None:intergenic 45.0%
GTCAAGATTGAAGTGTGTCC+GGG - chr6_3:98921096-98921115 None:intergenic 45.0%
! ATGGTAACACCTTTGGGAAC+GGG + chr6_3:98921260-98921279 Msa0968450:intron 45.0%
! TGTTGGTTGTTTGTCATGGG+TGG + chr6_3:98921390-98921409 Msa0968450:intron 45.0%
GTCATGGGTGGTATTTGATC+GGG + chr6_3:98921402-98921421 Msa0968450:intron 45.0%
TCATGGGTGGTATTTGATCG+GGG + chr6_3:98921403-98921422 Msa0968450:intron 45.0%
AAGTAGATCAGCCATAGAGC+TGG + chr6_3:98921469-98921488 Msa0968450:intron 45.0%
TTGGTTACACACCAGCTCTA+TGG - chr6_3:98921483-98921502 None:intergenic 45.0%
GATTGGGAGGGTAATAACTG+AGG + chr6_3:98921530-98921549 Msa0968450:intron 45.0%
AAGGCAATCGGAGAATAGCA+CGG + chr6_3:98921603-98921622 Msa0968450:intron 45.0%
AGGGTGACAATTTGGTTGTG+TGG + chr6_3:98921816-98921835 Msa0968450:intron 45.0%
GGGTGACAATTTGGTTGTGT+GGG + chr6_3:98921817-98921836 Msa0968450:intron 45.0%
TATTCACTCTAATCGGTGGC+TGG + chr6_3:98921923-98921942 Msa0968450:intron 45.0%
ATTCACTCTAATCGGTGGCT+GGG + chr6_3:98921924-98921943 Msa0968450:intron 45.0%
ACTAAGTAATCACCCTCGTG+TGG - chr6_3:98922134-98922153 None:intergenic 45.0%
ATCATCAGATCCTGAACTCC+AGG - chr6_3:98922361-98922380 None:intergenic 45.0%
CAGGGAGGAAGGAAATAAGT+GGG - chr6_3:98922539-98922558 None:intergenic 45.0%
ACAGGGAGGAAGGAAATAAG+TGG - chr6_3:98922540-98922559 None:intergenic 45.0%
! TTTCCTTCCTCCCTGTTTTG+TGG + chr6_3:98922544-98922563 Msa0968450:intron 45.0%
! TTCCTTCCTCCCTGTTTTGT+GGG + chr6_3:98922545-98922564 Msa0968450:intron 45.0%
AACAAACCCACAAAACAGGG+AGG - chr6_3:98922554-98922573 None:intergenic 45.0%
TGCTTATAATAGTGACCGGG+GGG + chr6_3:98922807-98922826 Msa0968450:intron 45.0%
GTAAAGTTACATACTCCCCC+CGG - chr6_3:98922825-98922844 None:intergenic 45.0%
! AACCCTTTTTCTCCAGAGAC+AGG + chr6_3:98923031-98923050 Msa0968450:intron 45.0%
! CATCCTGTCTCTGGAGAAAA+AGG - chr6_3:98923037-98923056 None:intergenic 45.0%
AGTGTAATGCATCCTGTCTC+TGG - chr6_3:98923046-98923065 None:intergenic 45.0%
TAGGGGTGGTTCCTCTTTAT+CGG - chr6_3:98923155-98923174 None:intergenic 45.0%
CTGTTAGGGACTTAGGGTAA+GGG - chr6_3:98923237-98923256 None:intergenic 45.0%
TCTGTTAGGGACTTAGGGTA+AGG - chr6_3:98923238-98923257 None:intergenic 45.0%
GGAAGTTCTGTTAGGGACTT+AGG - chr6_3:98923244-98923263 None:intergenic 45.0%
AAGAATACCTGGGAGATAGG+GGG - chr6_3:98923320-98923339 None:intergenic 45.0%
TGCAATGTATGAGAGCAACG+TGG - chr6_3:98923359-98923378 None:intergenic 45.0%
ATAGGGCATGGACCTATGTT+TGG - chr6_3:98923393-98923412 None:intergenic 45.0%
AAACATAGGTCCATGCCCTA+TGG + chr6_3:98923392-98923411 Msa0968450:intron 45.0%
CTACTTGGGCGGTTAACATT+TGG + chr6_3:98923415-98923434 Msa0968450:intron 45.0%
TTGTGGGTTTGATTGTCTGG+AGG + chr6_3:98923443-98923462 Msa0968450:intron 45.0%
TGTGGGTTTGATTGTCTGGA+GGG + chr6_3:98923444-98923463 Msa0968450:intron 45.0%
! AAACAGAAGGGCTCCTGTTT+TGG + chr6_3:98924165-98924184 Msa0968450:CDS 45.0%
TTGTGCGCATAGCTGTTATC+AGG + chr6_3:98924504-98924523 Msa0968450:intron 45.0%
GGTGATGAAATAGCGAAGAG+AGG + chr6_3:98924888-98924907 Msa0968450:CDS 45.0%
! AAGAGAGGCATAGATCCTCA+TGG + chr6_3:98924903-98924922 Msa0968450:CDS 45.0%
AGGCATAGATCCTCATGGTA+AGG + chr6_3:98924908-98924927 Msa0968450:CDS 45.0%
GACTGCTTTCAAGATAGGTC+AGG - chr6_3:98924960-98924979 None:intergenic 45.0%
GTAAAAGATATGGGCAGAGG+AGG - chr6_3:98925177-98925196 None:intergenic 45.0%
TGGGTAAAAGATATGGGCAG+AGG - chr6_3:98925180-98925199 None:intergenic 45.0%
TAACATTCTTATGGGCCTGC+AGG + chr6_3:98925999-98926018 Msa0968450:intron 45.0%
CAGGTTGCCTTGCTAGATTA+TGG + chr6_3:98926349-98926368 Msa0968450:intron 45.0%
TGCCTTGCTAGATTATGGAC+AGG + chr6_3:98926354-98926373 Msa0968450:CDS 45.0%
CACCTGTCCATAATCTAGCA+AGG - chr6_3:98926359-98926378 None:intergenic 45.0%
TAACCAAGCCTCAATTGCTC+CGG - chr6_3:98926391-98926410 None:intergenic 45.0%
CTCGTTCTTGCAATTGCTGA+CGG + chr6_3:98926418-98926437 Msa0968450:CDS 45.0%
CTATTGGAGTAGCTAAGAGC+TGG + chr6_3:98926800-98926819 Msa0968450:intron 45.0%
AGAGAATGCTCTAGTGCGAA+AGG + chr6_3:98926965-98926984 Msa0968450:intron 45.0%
GGCTTGTGGCTTCAACTTTA+GGG - chr6_3:98927307-98927326 None:intergenic 45.0%
TGAGAATGATAGCTGATCGG+TGG + chr6_3:98927571-98927590 Msa0968450:intron 45.0%
! TGCAGCATTTTTACACCAGG+AGG - chr6_3:98927737-98927756 None:intergenic 45.0%
! GGTTGCAGCATTTTTACACC+AGG - chr6_3:98927740-98927759 None:intergenic 45.0%
CTAATGTCCGTGTCACATCA+AGG - chr6_3:98927857-98927876 None:intergenic 45.0%
ATAATCAGGGGATAGGGGAT+AGG + chr6_3:98927947-98927966 Msa0968450:intron 45.0%
CATTCCCCCTTAGTTTCCTT+GGG - chr6_3:98928052-98928071 None:intergenic 45.0%
TCATTCCCCCTTAGTTTCCT+TGG - chr6_3:98928053-98928072 None:intergenic 45.0%
TGGAAAAGCCTACCATAACC+AGG - chr6_3:98928418-98928437 None:intergenic 45.0%
GACAGAGCTTCTTCAGCAAT+GGG - chr6_3:98928534-98928553 None:intergenic 45.0%
AGACAGAGCTTCTTCAGCAA+TGG - chr6_3:98928535-98928554 None:intergenic 45.0%
!!! TAATCATTTTAAATATATAT+TGG + chr6_3:98923469-98923488 Msa0968450:intron 5.0%
!! TAAAAGTTAAAAATTATATT+AGG - chr6_3:98926298-98926317 None:intergenic 5.0%
TGCTCGAACCCAGAACTGAA+AGG - chr6_3:98920259-98920278 None:intergenic 50.0%
TCTATGTGCTCTGACCTTGG+TGG + chr6_3:98920526-98920545 Msa0968450:CDS 50.0%
CCTTGAGGAAGAAACCACCA+AGG - chr6_3:98920543-98920562 None:intergenic 50.0%
! CCTTGGTGGTTTCTTCCTCA+AGG + chr6_3:98920540-98920559 Msa0968450:CDS 50.0%
CTTGTGCTTGAGAACGAGCT+TGG + chr6_3:98920761-98920780 Msa0968450:CDS 50.0%
GCAATTGAAGCGGAACCAAG+AGG - chr6_3:98920827-98920846 None:intergenic 50.0%
TGGTTCCGCTTCAATTGCTC+AGG + chr6_3:98920829-98920848 Msa0968450:CDS 50.0%
CAGCTAGTATACAGAGTGGC+TGG + chr6_3:98921130-98921149 Msa0968450:intron 50.0%
!! AGTGGCTGGTTCTACTTCGT+AGG + chr6_3:98921144-98921163 Msa0968450:intron 50.0%
! TGGTAACACCTTTGGGAACG+GGG + chr6_3:98921261-98921280 Msa0968450:intron 50.0%
GGTATTTGATCGGGGTTGAG+TGG + chr6_3:98921411-98921430 Msa0968450:intron 50.0%
AGAGCTGTGTGATGATTGGG+AGG + chr6_3:98921517-98921536 Msa0968450:intron 50.0%
GAGCTGTGTGATGATTGGGA+GGG + chr6_3:98921518-98921537 Msa0968450:intron 50.0%
!! AATGGGTGGACTGGTGAAGT+TGG + chr6_3:98921561-98921580 Msa0968450:intron 50.0%
!! ATGGGTGGACTGGTGAAGTT+GGG + chr6_3:98921562-98921581 Msa0968450:intron 50.0%
! ACTGGTGAAGTTGGGGGTAT+CGG + chr6_3:98921570-98921589 Msa0968450:intron 50.0%
AGGCAATCGGAGAATAGCAC+GGG + chr6_3:98921604-98921623 Msa0968450:intron 50.0%
ATGCAACAGGTTCAGCATCC+TGG + chr6_3:98922340-98922359 Msa0968450:intron 50.0%
AACCCACAAAACAGGGAGGA+AGG - chr6_3:98922550-98922569 None:intergenic 50.0%
GGGGAGGACAAAGAATACCT+GGG - chr6_3:98923330-98923349 None:intergenic 50.0%
AGGGGAGGACAAAGAATACC+TGG - chr6_3:98923331-98923350 None:intergenic 50.0%
TGAGAGCAACGTGGCCAAAA+GGG - chr6_3:98923350-98923369 None:intergenic 50.0%
ATGAGAGCAACGTGGCCAAA+AGG - chr6_3:98923351-98923370 None:intergenic 50.0%
TCCATGCCCTATGGCTACTT+GGG + chr6_3:98923401-98923420 Msa0968450:intron 50.0%
TAACCGCCCAAGTAGCCATA+GGG - chr6_3:98923410-98923429 None:intergenic 50.0%
TTAACCGCCCAAGTAGCCAT+AGG - chr6_3:98923411-98923430 None:intergenic 50.0%
GTCAGGAGCTTACTGCTTTG+CGG - chr6_3:98924943-98924962 None:intergenic 50.0%
! GAAAAGTGGGTTCTTCCACG+CGG + chr6_3:98926066-98926085 Msa0968450:CDS 50.0%
TAGCAAGGCAACCTGAATCC+AGG - chr6_3:98926344-98926363 None:intergenic 50.0%
TGGACAGGTGAAAGATCTCC+CGG + chr6_3:98926369-98926388 Msa0968450:CDS 50.0%
AAGATCTCCCGGAGCAATTG+AGG + chr6_3:98926380-98926399 Msa0968450:CDS 50.0%
AACCAAGCCTCAATTGCTCC+GGG - chr6_3:98926390-98926409 None:intergenic 50.0%
CGAGAGCTTCAGAGAGCTAT+AGG + chr6_3:98926449-98926468 Msa0968450:CDS 50.0%
TCCTCCCCTCTACCAATTGA+AGG - chr6_3:98926917-98926936 None:intergenic 50.0%
TCAATTGGTAGAGGGGAGGA+TGG + chr6_3:98926917-98926936 Msa0968450:intron 50.0%
!! CGAAAGGAGAGTGCTCCTTT+GGG + chr6_3:98926981-98927000 Msa0968450:intron 50.0%
!! GAAAGGAGAGTGCTCCTTTG+GGG + chr6_3:98926982-98927001 Msa0968450:intron 50.0%
GGGCTTGTGGCTTCAACTTT+AGG - chr6_3:98927308-98927327 None:intergenic 50.0%
GATAGCTGATCGGTGGCTAA+TGG + chr6_3:98927578-98927597 Msa0968450:intron 50.0%
TTCCTGTGCCTGGTTATGGT+AGG + chr6_3:98928407-98928426 Msa0968450:intron 50.0%
TTCGGACAGTGCATCTACTG+AGG + chr6_3:98928457-98928476 Msa0968450:CDS 50.0%
TCGGACAGTGCATCTACTGA+GGG + chr6_3:98928458-98928477 Msa0968450:CDS 50.0%
CTACTGAGGGGACTTAGTGT+TGG + chr6_3:98928471-98928490 Msa0968450:CDS 50.0%
! AGGGGACTTAGTGTTGGACT+TGG + chr6_3:98928477-98928496 Msa0968450:CDS 50.0%
GAAGAAGCTCTGTCTCAAGC+TGG + chr6_3:98928540-98928559 Msa0968450:CDS 50.0%
GGGGACCTCACAACCATAGT+TGG - chr6_3:98920030-98920049 None:intergenic 55.0%
CATGCAGCAGGTGCCAAATC+CGG - chr6_3:98920680-98920699 None:intergenic 55.0%
GGATTTGGCACCTGCTGCAT+GGG + chr6_3:98920679-98920698 Msa0968450:CDS 55.0%
CACCTGCTGCATGGGTGAAA+AGG + chr6_3:98920687-98920706 Msa0968450:CDS 55.0%
! AGCCTTTTCACCCATGCAGC+AGG - chr6_3:98920692-98920711 None:intergenic 55.0%
TGCTGCATGGGTGAAAAGGC+TGG + chr6_3:98920691-98920710 Msa0968450:CDS 55.0%
ATTGAAGTGTGTCCGGGGAC+TGG - chr6_3:98921090-98921109 None:intergenic 55.0%
! ACCTTTGGGAACGGGGTTTG+TGG + chr6_3:98921268-98921287 Msa0968450:intron 55.0%
ACCACAAACCCCGTTCCCAA+AGG - chr6_3:98921272-98921291 None:intergenic 55.0%
!! TGGGTGGACTGGTGAAGTTG+GGG + chr6_3:98921563-98921582 Msa0968450:intron 55.0%
!! GGTGGCTCGGTTAAGGCAAT+CGG + chr6_3:98921591-98921610 Msa0968450:intron 55.0%
GGCAATCGGAGAATAGCACG+GGG + chr6_3:98921605-98921624 Msa0968450:intron 55.0%
GGTTCAGCATCCTGGAGTTC+AGG + chr6_3:98922348-98922367 Msa0968450:intron 55.0%
GAGAGCAACGTGGCCAAAAG+GGG - chr6_3:98923349-98923368 None:intergenic 55.0%
GTCCATGCCCTATGGCTACT+TGG + chr6_3:98923400-98923419 Msa0968450:intron 55.0%
ATGCCCTATGGCTACTTGGG+CGG + chr6_3:98923404-98923423 Msa0968450:intron 55.0%
CGTAGAGTTAGGCCAGGTTG+AGG - chr6_3:98923587-98923606 None:intergenic 55.0%
GCAGCTGCAACCTTACCATG+AGG - chr6_3:98924921-98924940 None:intergenic 55.0%
GCACACTCTGCGCCTATACA+TGG + chr6_3:98925319-98925338 Msa0968450:intron 55.0%
!! TAGCTCTCTGAAGCTCTCGC+TGG - chr6_3:98926448-98926467 None:intergenic 55.0%
GCCTTCAATTGGTAGAGGGG+AGG + chr6_3:98926913-98926932 Msa0968450:intron 55.0%
!! GCGAAAGGAGAGTGCTCCTT+TGG + chr6_3:98926980-98926999 Msa0968450:intron 55.0%
TGCACTCAAGGCTACCCCAA+AGG - chr6_3:98926999-98927018 None:intergenic 55.0%
! TTGGGGTAGCCTTGAGTGCA+AGG + chr6_3:98926999-98927018 Msa0968450:intron 55.0%
AGCCTACCATAACCAGGCAC+AGG - chr6_3:98928412-98928431 None:intergenic 55.0%
CGGACAGTGCATCTACTGAG+GGG + chr6_3:98928459-98928478 Msa0968450:CDS 55.0%
CGGATTTGGCACCTGCTGCA+TGG + chr6_3:98920678-98920697 Msa0968450:CDS 60.0%
! GGACTGGTGTCCGACACATG+TGG - chr6_3:98921074-98921093 None:intergenic 60.0%
ATGTGTCGGACACCAGTCCC+CGG + chr6_3:98921075-98921094 Msa0968450:intron 60.0%
GATCGGGGTTGAGTGGCTAC+CGG + chr6_3:98921418-98921437 Msa0968450:intron 60.0%
!! GGGTGGACTGGTGAAGTTGG+GGG + chr6_3:98921564-98921583 Msa0968450:intron 60.0%
!! GGTGAAGTTGGGGGTATCGG+TGG + chr6_3:98921573-98921592 Msa0968450:intron 60.0%
!! AGTTGGGGGTATCGGTGGCT+CGG + chr6_3:98921578-98921597 Msa0968450:intron 60.0%
!! GGGTATCGGTGGCTCGGTTA+AGG + chr6_3:98921584-98921603 Msa0968450:intron 60.0%
CTCACTTCCCCCTATCTCCC+AGG + chr6_3:98923310-98923329 Msa0968450:intron 60.0%
AGCAACGTGGCCAAAAGGGG+AGG - chr6_3:98923346-98923365 None:intergenic 60.0%
GCCCAAGTAGCCATAGGGCA+TGG - chr6_3:98923405-98923424 None:intergenic 60.0%
CATGAGGGAGGCCAGTGCAA+TGG + chr6_3:98924114-98924133 Msa0968450:CDS 60.0%
TTCCACGCGGATCCTCATCC+AGG + chr6_3:98926079-98926098 Msa0968450:CDS 60.0%
TTCCTGGATGAGGATCCGCG+TGG - chr6_3:98926084-98926103 None:intergenic 60.0%
CTCCCGGAGCAATTGAGGCT+TGG + chr6_3:98926385-98926404 Msa0968450:CDS 60.0%
CGGAGAATAGCACGGGGCCA+TGG + chr6_3:98921611-98921630 Msa0968450:intron 65.0%
Chromosome Type Strat End Strand Name
chr6_3 gene 98919983 98928596 98919983 ID=Msa0968450;Name=Msa0968450
chr6_3 mRNA 98919983 98928596 98919983 ID=Msa0968450-mRNA-1;Parent=Msa0968450;Name=Msa0968450-mRNA-1;_AED=0.14;_eAED=0.14;_QI=197|0.9|0.81|1|1|1|11|0|467
chr6_3 exon 98919983 98920302 98919983 ID=Msa0968450-mRNA-1:exon:18605;Parent=Msa0968450-mRNA-1
chr6_3 exon 98920433 98920561 98920433 ID=Msa0968450-mRNA-1:exon:18606;Parent=Msa0968450-mRNA-1
chr6_3 exon 98920656 98920850 98920656 ID=Msa0968450-mRNA-1:exon:18607;Parent=Msa0968450-mRNA-1
chr6_3 exon 98922226 98922273 98922226 ID=Msa0968450-mRNA-1:exon:18608;Parent=Msa0968450-mRNA-1
chr6_3 exon 98922349 98922477 98922349 ID=Msa0968450-mRNA-1:exon:18609;Parent=Msa0968450-mRNA-1
chr6_3 exon 98924094 98924218 98924094 ID=Msa0968450-mRNA-1:exon:18610;Parent=Msa0968450-mRNA-1
chr6_3 exon 98924839 98924949 98924839 ID=Msa0968450-mRNA-1:exon:18611;Parent=Msa0968450-mRNA-1
chr6_3 exon 98926021 98926129 98926021 ID=Msa0968450-mRNA-1:exon:18612;Parent=Msa0968450-mRNA-1
chr6_3 exon 98926352 98926470 98926352 ID=Msa0968450-mRNA-1:exon:18613;Parent=Msa0968450-mRNA-1
chr6_3 exon 98927652 98927799 98927652 ID=Msa0968450-mRNA-1:exon:18614;Parent=Msa0968450-mRNA-1
chr6_3 exon 98928429 98928596 98928429 ID=Msa0968450-mRNA-1:exon:18615;Parent=Msa0968450-mRNA-1
chr6_3 five_prime_UTR 98919983 98920179 98919983 ID=Msa0968450-mRNA-1:five_prime_utr;Parent=Msa0968450-mRNA-1
chr6_3 CDS 98920180 98920302 98920180 ID=Msa0968450-mRNA-1:cds;Parent=Msa0968450-mRNA-1
chr6_3 CDS 98920433 98920561 98920433 ID=Msa0968450-mRNA-1:cds;Parent=Msa0968450-mRNA-1
chr6_3 CDS 98920656 98920850 98920656 ID=Msa0968450-mRNA-1:cds;Parent=Msa0968450-mRNA-1
chr6_3 CDS 98922226 98922273 98922226 ID=Msa0968450-mRNA-1:cds;Parent=Msa0968450-mRNA-1
chr6_3 CDS 98922349 98922477 98922349 ID=Msa0968450-mRNA-1:cds;Parent=Msa0968450-mRNA-1
chr6_3 CDS 98924094 98924218 98924094 ID=Msa0968450-mRNA-1:cds;Parent=Msa0968450-mRNA-1
chr6_3 CDS 98924839 98924949 98924839 ID=Msa0968450-mRNA-1:cds;Parent=Msa0968450-mRNA-1
chr6_3 CDS 98926021 98926129 98926021 ID=Msa0968450-mRNA-1:cds;Parent=Msa0968450-mRNA-1
chr6_3 CDS 98926352 98926470 98926352 ID=Msa0968450-mRNA-1:cds;Parent=Msa0968450-mRNA-1
chr6_3 CDS 98927652 98927799 98927652 ID=Msa0968450-mRNA-1:cds;Parent=Msa0968450-mRNA-1
chr6_3 CDS 98928429 98928596 98928429 ID=Msa0968450-mRNA-1:cds;Parent=Msa0968450-mRNA-1
Gene Sequence

>Msa0968450

ATGTTGCCCCCTATCGTCGTTGATCTCAACGACATAAAACAGAAACTCTCCGTTCAGTTTCGTCCTATTCAACGTTCCTTTCAGTTCTGGGTTCGAGCAATTGATATTTACACCGGATACAAGGTTTTTCAATTGAGAGTTAATTTTGTGAAAGATGCACAGAAGCAAGAAGCAATGTGGGAAAGACAGCATGAGCTTGCTGCCGATAAGATTTTCTCTATGTGCTCTGACCTTGGTGGTTTCTTCCTCAAGATTGCGCAAATTATTGGGAAGCCGGATTTGGCACCTGCTGCATGGGTGAAAAGGCTGGTTACGCTCTGTGATCAAGCTCCACCAACTTCTTATCACACTGTTAAACTTGTGCTTGAGAACGAGCTTGGAATGAGTATTGATGATGTGTTTGATAGATTTGATGTTGAGCCTCTTGGTTCCGCTTCAATTGCTCAGGTTCATAAAGCAAGACTGAAAGGTGACAAAAGTGATGTTGTTGTCAAGGTTCAGCATCCTGGAGTTCAGGATCTGATGATGACAGATATACGTAACTTGCAAGCTTTTGCTTTGTACATGCAAAAAACAGATATCAAATTTGATCTATATTCGGTGACAAAGGAAATGGAAACACAGATTGGATATGAATTTGACTTCATGAGGGAGGCCAGTGCAATGGAAAAGATTAGAAAGTTCTTGTATAAAATAAACAGAAGGGCTCCTGTTTTGGTGCCAAGAGTTATACGTGATATGGTTACTAGAAAGGTCCTAGTTATGGAATATATTGACGGGATTCCAATAATGAACCTTGGTGATGAAATAGCGAAGAGAGGCATAGATCCTCATGGTAAGGTTGCAGCTGCCGCAAAGCAGAAAATTCTTCAAAGTTTGACTCTAGCATATGGTCAAATGATTTTGAAAAGTGGGTTCTTCCACGCGGATCCTCATCCAGGAAATATCCTGATTTGTAAAGGATCAGAGGTTGCCTTGCTAGATTATGGACAGGTGAAAGATCTCCCGGAGCAATTGAGGCTTGGTTATGCTAATCTCGTTCTTGCAATTGCTGACGGTGATCCAGCGAGAGCTTCAGAGAGCTATAGAGGTATAGATACGTTAAGCAAATGTGAAAATGAGCAACAAGAAATGCTTAAGCTGGCACAGACAATGTTTGATACAAAATTACCTCCTGGTGTAAAAATGCTGCAACCGTTTTCAGAAGAATCTTCAATTAAAAAAATTGCTGTTCAGGCTTTTCCAGAAGAACTGTTTTCTATACTTCGGACAGTGCATCTACTGAGGGGACTTAGTGTTGGACTTGGAATCAATTATTCTTGTGCGGAACAGTGGAGACCCATTGCTGAAGAAGCTCTGTCTCAAGCTGGCAGATTTAAAGGTGCCACTGTAACTCTTGCTTAA

Protein sequence

>Msa0968450

MLPPIVVDLNDIKQKLSVQFRPIQRSFQFWVRAIDIYTGYKVFQLRVNFVKDAQKQEAMWERQHELAADKIFSMCSDLGGFFLKIAQIIGKPDLAPAAWVKRLVTLCDQAPPTSYHTVKLVLENELGMSIDDVFDRFDVEPLGSASIAQVHKARLKGDKSDVVVKVQHPGVQDLMMTDIRNLQAFALYMQKTDIKFDLYSVTKEMETQIGYEFDFMREASAMEKIRKFLYKINRRAPVLVPRVIRDMVTRKVLVMEYIDGIPIMNLGDEIAKRGIDPHGKVAAAAKQKILQSLTLAYGQMILKSGFFHADPHPGNILICKGSEVALLDYGQVKDLPEQLRLGYANLVLAIADGDPARASESYRGIDTLSKCENEQQEMLKLAQTMFDTKLPPGVKMLQPFSEESSIKKIAVQAFPEELFSILRTVHLLRGLSVGLGINYSCAEQWRPIAEEALSQAGRFKGATVTLA*