AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0786090


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0786090 MtrunA17_Chr5g0443561 95.975 323 13 0 1 323 1 323 0.0 635
Msa0786090 MtrunA17_Chr7g0256571 69.231 364 65 3 7 323 6 369 8.23e-179 499
Msa0786090 MtrunA17_Chr7g0256581 68.132 364 69 3 7 323 6 369 2.41e-175 490
Msa0786090 MtrunA17_Chr7g0256561 73.926 326 81 2 1 323 11 335 5.52e-175 488
Msa0786090 MtrunA17_Chr2g0322241 48.295 352 128 7 23 323 47 395 4.43e-104 310
Msa0786090 MtrunA17_Chr4g0025341 46.154 351 136 7 23 323 44 391 2.37e-97 293
Msa0786090 MtrunA17_Chr2g0329531 45.886 316 120 6 48 313 82 396 3.23e-85 262
Msa0786090 MtrunA17_Chr7g0256601 41.867 332 139 5 45 322 85 416 1.16e-84 261
Msa0786090 MtrunA17_Chr7g0256591 40.634 347 152 6 30 322 39 385 1.87e-84 259
Msa0786090 MtrunA17_Chr4g0062001 41.587 315 162 3 29 321 20 334 2.65e-78 242
Msa0786090 MtrunA17_Chr8g0376581 41.216 296 154 3 47 322 36 331 1.00e-74 233
Msa0786090 MtrunA17_Chr4g0062031 41.869 289 155 5 47 322 37 325 7.07e-73 228
Msa0786090 MtrunA17_Chr4g0062021 40.614 293 152 4 47 317 50 342 4.43e-69 219
Msa0786090 MtrunA17_Chr2g0307721 44.631 298 144 4 38 314 37 334 2.19e-68 228
Msa0786090 MtrunA17_Chr2g0307721 40.469 341 175 8 5 320 455 792 3.62e-63 213
Msa0786090 MtrunA17_Chr2g0307721 44.304 79 44 0 100 178 343 421 1.40e-13 71.6
Msa0786090 MtrunA17_Chr4g0020271 38.251 183 92 3 153 315 2 183 9.85e-36 128
Msa0786090 MtrunA17_Chr8g0370791 34.934 229 128 5 48 276 78 285 1.21e-32 124
Msa0786090 MtrunA17_Chr8g0370761 34.348 230 128 6 48 276 78 285 1.16e-31 122
Msa0786090 MtrunA17_Chr4g0062051 45.185 135 71 1 47 178 41 175 1.26e-31 117
Msa0786090 MtrunA17_Chr4g0061871 42.982 114 65 0 178 291 18 131 3.53e-26 100
Msa0786090 MtrunA17_Chr2g0300841 29.355 310 165 9 58 323 58 357 5.56e-24 100
Msa0786090 MtrunA17_Chr2g0300851 28.866 291 156 8 73 323 70 349 7.58e-23 97.4
Msa0786090 MtrunA17_Chr2g0300861 29.739 306 160 10 58 319 70 364 2.94e-22 95.9
Msa0786090 MtrunA17_Chr4g0062061 38.462 117 61 2 217 322 4 120 7.73e-21 86.3
Msa0786090 MtrunA17_Chr8g0370771 33.333 135 89 1 142 276 17 150 1.19e-20 89.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0786090 AT3G57030.1 56.232 345 108 2 22 323 30 374 1.05e-136 392
Msa0786090 AT5G22020.3 47.214 341 129 5 31 323 58 395 1.09e-98 296
Msa0786090 AT5G22020.1 47.214 341 129 5 31 323 58 395 1.09e-98 296
Msa0786090 AT5G22020.2 47.214 341 129 5 31 323 58 395 1.09e-98 296
Msa0786090 AT1G08470.1 45.714 350 136 7 24 323 44 389 7.75e-98 294
Msa0786090 AT2G41290.1 44.444 369 149 9 10 323 9 376 1.48e-88 270
Msa0786090 AT3G57010.1 44.444 360 146 8 9 320 14 367 1.53e-88 270
Msa0786090 AT2G41300.1 45.806 310 122 4 54 320 84 390 4.11e-87 267
Msa0786090 AT3G57020.1 42.424 363 151 8 11 320 9 366 4.82e-87 266
Msa0786090 AT3G57020.2 40.771 363 143 8 11 320 9 352 8.77e-80 247
Msa0786090 AT3G59530.3 50.206 243 112 3 39 273 75 316 5.01e-77 241
Msa0786090 AT3G59530.2 50.206 243 112 3 39 273 75 316 5.01e-77 241
Msa0786090 AT3G59530.1 50.206 243 112 3 39 273 75 316 5.01e-77 241
Msa0786090 AT1G74020.1 41.297 293 152 6 48 323 38 327 2.52e-65 209
Msa0786090 AT1G74010.1 39.932 293 155 7 48 323 37 325 5.26e-61 197
Msa0786090 AT1G74000.1 38.776 294 160 7 47 323 39 329 9.09e-60 194
Msa0786090 AT3G51430.1 31.783 258 156 6 24 280 45 283 1.41e-30 119
Msa0786090 AT3G51430.2 30.435 276 171 7 24 297 45 301 1.80e-30 119
Msa0786090 AT3G51440.1 32.031 256 151 7 49 300 70 306 2.91e-30 118
Msa0786090 AT3G51450.1 31.330 233 140 6 49 280 70 283 6.51e-28 112
Msa0786090 AT3G51420.1 30.973 226 136 6 49 273 70 276 6.53e-27 109

Find 93 sgRNAs with CRISPR-Local

Find 269 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGAATACAATATACTCTTTC+TGG 0.161342 5_2:-71515250 Msa0786090:three_prime_UTR
ATTCTTCGACTTTGGCTTCA+TGG 0.205561 5_2:-71515519 Msa0786090:CDS
TAGGTGAAACTTCGACTTTC+CGG 0.217649 5_2:-71515542 Msa0786090:CDS
GAAATTCAGATGGGCAGTTT+TGG 0.258450 5_2:-71515434 Msa0786090:CDS
TCAATGACAAAATATCTTAA+TGG 0.309301 5_2:-71514772 Msa0786090:three_prime_UTR
CTTTCCGGATTCTTCGACTT+TGG 0.322440 5_2:-71515527 Msa0786090:CDS
CTGTCCTTTGATCCAGAAAT+AGG 0.328746 5_2:+71518929 None:intergenic
ATATTGACTTGGCCAGCATT+AGG 0.334062 5_2:+71515495 None:intergenic
CTTCTTAGCGGAGACAAAAC+TGG 0.347076 5_2:-71515672 Msa0786090:CDS
TCCATTCGCACCAGAGTTAG+AGG 0.369138 5_2:-71516277 Msa0786090:CDS
CAGGTTATCCGGACAATATA+AGG 0.377879 5_2:-71515458 Msa0786090:CDS
TATTGACTTGGCCAGCATTA+GGG 0.387491 5_2:+71515496 None:intergenic
CAAAATATCTTAATGGAGTT+CGG 0.415781 5_2:-71514765 Msa0786090:three_prime_UTR
CTCCATGTCACCGGAGCCGT+TGG 0.420609 5_2:-71518887 Msa0786090:CDS
TGTTGTTCTTCCAGGTTATC+CGG 0.422543 5_2:-71515469 Msa0786090:CDS
TGGCTTCATGGCCCTAATGC+TGG 0.424712 5_2:-71515507 Msa0786090:CDS
GACGGTTTATTTCTTCTAGT+AGG 0.425500 5_2:-71515561 Msa0786090:CDS
GCTATAAAGTTGAGTGATGA+AGG 0.432202 5_2:-71515393 Msa0786090:CDS
TTGCTGTCACTAGTTCCAAT+AGG 0.439270 5_2:-71518760 Msa0786090:intron
CCATCCGCCACGCCCGTGTA+TGG 0.441523 5_2:+71518827 None:intergenic
CTTATATTGTCCGGATAACC+TGG 0.443834 5_2:+71515459 None:intergenic
CGATGAAAAGAGTGCAAAGA+TGG 0.444702 5_2:+71518955 None:intergenic
AGTATTATACTACCCATGTC+AGG 0.458468 5_2:-71515090 Msa0786090:three_prime_UTR
CCAGAGTTAGAGGATATTTG+TGG 0.459327 5_2:-71516267 Msa0786090:CDS
GAATTTCTCCTTATATTGTC+CGG 0.460285 5_2:+71515450 None:intergenic
ACTCTCCGGCCCAACGGCTC+CGG 0.460954 5_2:+71518877 None:intergenic
TTGCTTAAACAAACACCGTT+GGG 0.463178 5_2:+71515585 None:intergenic
TACATTGTTGATGCCTACCT+TGG 0.478042 5_2:-71516201 Msa0786090:CDS
GAAGTGAATGTCTTATTAAG+TGG 0.483610 5_2:-71515618 Msa0786090:CDS
TCCTCTAACTCTGGTGCGAA+TGG 0.487071 5_2:+71516276 None:intergenic
GAAGCCAAAGTCGAAGAATC+CGG 0.487945 5_2:+71515523 None:intergenic
AAACTATAAATACCAACATA+AGG 0.492238 5_2:+71515276 None:intergenic
GCCCAACGGCTCCGGTGACA+TGG 0.497514 5_2:+71518885 None:intergenic
CATTTATATTTAAATAATTG+TGG 0.500843 5_2:-71514974 Msa0786090:three_prime_UTR
TGGATCAAAGGACAGTCTCC+AGG 0.505663 5_2:-71518921 Msa0786090:CDS
CCACAAATATCCTCTAACTC+TGG 0.512177 5_2:+71516267 None:intergenic
CTGCAGGTCCTACTACGTTA+AGG 0.516853 5_2:+71516178 None:intergenic
TTTGCTTAAACAAACACCGT+TGG 0.522071 5_2:+71515584 None:intergenic
TAATGGAGTTCGGAAAATGT+AGG 0.522107 5_2:-71514755 Msa0786090:three_prime_UTR
GATATTTGTGGGAGGCCACT+AGG 0.524182 5_2:-71516255 Msa0786090:CDS
TCCATGTCACCGGAGCCGTT+GGG 0.527613 5_2:-71518886 Msa0786090:CDS
TGTCACCGGAGCCGTTGGGC+CGG 0.534102 5_2:-71518882 Msa0786090:CDS
GGTTCCTATTTCTGGATCAA+AGG 0.539472 5_2:-71518933 Msa0786090:CDS
CTTAACGTAGTAGGACCTGC+AGG 0.540126 5_2:-71516177 Msa0786090:CDS
TTATCAAATCTTAGTCCTAG+TGG 0.547763 5_2:+71516240 None:intergenic
CGCTTCACTGACATATCTCA+TGG 0.548468 5_2:+71515341 None:intergenic
AATAAAAGAATCCCCTGACA+TGG 0.550973 5_2:+71515077 None:intergenic
TACCTTGGCCTTAACGTAGT+AGG 0.551747 5_2:-71516186 Msa0786090:CDS
ATGTCATTGTTGAAGCGAAA+GGG 0.551830 5_2:+71516114 None:intergenic
ACACGGGCGTGGCGGATGGT+CGG 0.554660 5_2:-71518823 Msa0786090:CDS
CAGAGTTAGAGGATATTTGT+GGG 0.555272 5_2:-71516266 Msa0786090:CDS
AGGGGAAATATTAGAAATCG+TGG 0.558229 5_2:-71515373 Msa0786090:CDS
CATGGAGTAACCGATCAGCC+TGG 0.564584 5_2:+71518903 None:intergenic
AAGTGAATGTCTTATTAAGT+GGG 0.566171 5_2:-71515617 Msa0786090:CDS
AGGACAGTCTCCAGGCTGAT+CGG 0.569322 5_2:-71518913 Msa0786090:CDS
CTTTCGCTTCAACAATGACA+TGG 0.569375 5_2:-71516112 Msa0786090:CDS
GTATTATACTACCCATGTCA+GGG 0.573292 5_2:-71515089 Msa0786090:three_prime_UTR
GTAATGGGGAGTAATTATGT+TGG 0.576359 5_2:-71515037 Msa0786090:three_prime_UTR
CCATACACGGGCGTGGCGGA+TGG 0.577467 5_2:-71518827 Msa0786090:CDS
AAGTATGAAGGGGAGGAACG+TGG 0.583448 5_2:-71518794 Msa0786090:CDS
GGTGTTTGTTTAAGCAAAGA+CGG 0.590239 5_2:-71515579 Msa0786090:CDS
TATAAAGTTGAGTGATGAAG+GGG 0.593424 5_2:-71515391 Msa0786090:CDS
CAAGCACAGTCTATCAGAGA+AGG 0.594605 5_2:-71516050 Msa0786090:intron
GTCCTACTACGTTAAGGCCA+AGG 0.595729 5_2:+71516184 None:intergenic
CGAAGGACCATACACGGGCG+TGG 0.599666 5_2:-71518834 Msa0786090:CDS
AATATAAGGAGAAATTCAGA+TGG 0.600334 5_2:-71515444 Msa0786090:CDS
GAAATATTAGAAATCGTGGA+AGG 0.606501 5_2:-71515369 Msa0786090:CDS
AGTGGGCTTAATTATCCCAA+CGG 0.610826 5_2:-71515600 Msa0786090:CDS
ATGAAGGGGAGGAACGTGGT+TGG 0.613290 5_2:-71518790 Msa0786090:CDS
TCATGGCGAAGGACCATACA+CGG 0.616572 5_2:-71518840 Msa0786090:CDS
GATCGGTTACTCCATGTCAC+CGG 0.620224 5_2:-71518896 Msa0786090:CDS
AGCTTCTGTTGCTAACTGTG+TGG 0.621050 5_2:+71516146 None:intergenic
TCGGTGTTAATGCCTTATGT+TGG 0.621568 5_2:-71515288 Msa0786090:CDS
GTGCAAGAAAAGTTGCAGCA+TGG 0.622116 5_2:+71518987 None:intergenic
CTATAAAGTTGAGTGATGAA+GGG 0.622219 5_2:-71515392 Msa0786090:CDS
AACAAGACTCTCCGGCCCAA+CGG 0.631984 5_2:+71518871 None:intergenic
CATGTCATTGTTGAAGCGAA+AGG 0.635612 5_2:+71516113 None:intergenic
TTAACGTAGTAGGACCTGCA+GGG 0.641562 5_2:-71516176 Msa0786090:CDS
CATGAGATATGTCAGTGAAG+CGG 0.643807 5_2:-71515340 Msa0786090:CDS
ATAAAAGAATCCCCTGACAT+GGG 0.644321 5_2:+71515078 None:intergenic
ATGAGTTCAAACACGAACGA+AGG 0.656155 5_2:-71514865 Msa0786090:three_prime_UTR
TTAGCGGAGACAAAACTGGA+AGG 0.657390 5_2:-71515668 Msa0786090:CDS
CAGTTAGCAACAGAAGCTGA+AGG 0.659999 5_2:-71516141 Msa0786090:CDS
ATATAAGGAGAAATTCAGAT+GGG 0.667598 5_2:-71515443 Msa0786090:CDS
TCTCCGCTAAGAAGTAAAAG+CGG 0.672637 5_2:+71515681 None:intergenic
AATTTCAAGGTCGAACTGTG+TGG 0.674077 5_2:-71516301 Msa0786090:intron
TACTACGTTAAGGCCAAGGT+AGG 0.676893 5_2:+71516188 None:intergenic
TATTATACTACCCATGTCAG+GGG 0.679685 5_2:-71515088 Msa0786090:three_prime_UTR
TAACGTAGTAGGACCTGCAG+GGG 0.691917 5_2:-71516175 Msa0786090:CDS
AGTTAGAGGATATTTGTGGG+AGG 0.696868 5_2:-71516263 Msa0786090:CDS
AGGACCATACACGGGCGTGG+CGG 0.702487 5_2:-71518831 Msa0786090:CDS
CATGGCGAAGGACCATACAC+GGG 0.708085 5_2:-71518839 Msa0786090:CDS
AACGTAGTAGGACCTGCAGG+GGG 0.714485 5_2:-71516174 Msa0786090:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTATTAAAAAAAAAAAAAAT+TGG - chr5_2:71516056-71516075 Msa0786090:CDS 0.0%
!!! ATTTTAATATTTATAAATAT+GGG + chr5_2:71516304-71516323 None:intergenic 0.0%
!! TTTGAAAAAAATATATAAGA+AGG + chr5_2:71515722-71515741 None:intergenic 10.0%
!!! TTTGAAAATTTTGAAAAATA+TGG + chr5_2:71515761-71515780 None:intergenic 10.0%
!!! AATTTTATGAAAATTTATAG+GGG + chr5_2:71515788-71515807 None:intergenic 10.0%
!!! CAATTTTATGAAAATTTATA+GGG + chr5_2:71515789-71515808 None:intergenic 10.0%
!!! ACAATTTTATGAAAATTTAT+AGG + chr5_2:71515790-71515809 None:intergenic 10.0%
!!! ATTTTCATAAAATTGTAAAT+TGG - chr5_2:71515794-71515813 Msa0786090:intron 10.0%
!!! TTTTCATAAAATTGTAAATT+GGG - chr5_2:71515795-71515814 Msa0786090:intron 10.0%
!!! TTTATAAATTCAAGATTTTT+GGG + chr5_2:71515926-71515945 None:intergenic 10.0%
!!! TTTTATAAATTCAAGATTTT+TGG + chr5_2:71515927-71515946 None:intergenic 10.0%
!! GTTATAAAAAAAAAATTGTT+TGG + chr5_2:71515991-71516010 None:intergenic 10.0%
!!! TTTTAATAATTTAAAGTTCT+AGG + chr5_2:71516045-71516064 None:intergenic 10.0%
!! GAAATTTCATAAATTTAATT+TGG + chr5_2:71516210-71516229 None:intergenic 10.0%
!! AAAATTTGAAAATTATAAGA+AGG + chr5_2:71516269-71516288 None:intergenic 10.0%
!!! TTTGGAATTTTAAAAATTTT+AGG + chr5_2:71516369-71516388 None:intergenic 10.0%
!! CATTTATATTTAAATAATTG+TGG - chr5_2:71518817-71518836 Msa0786090:CDS 10.0%
!!! TTTTCAAATTCTTTCTTTAT+TGG - chr5_2:71515086-71515105 Msa0786090:three_prime_UTR 15.0%
!!! TTTTTGGTACAATTTAATTT+TGG - chr5_2:71515116-71515135 Msa0786090:three_prime_UTR 15.0%
!! GGGTAAAAATAAAATAAAAA+TGG - chr5_2:71515301-71515320 Msa0786090:CDS 15.0%
!!! TTGTTATTTTTTAAAACTGA+GGG + chr5_2:71515821-71515840 None:intergenic 15.0%
!!! TTTGTTATTTTTTAAAACTG+AGG + chr5_2:71515822-71515841 None:intergenic 15.0%
!!! TTATAAATTCAAGATTTTTG+GGG + chr5_2:71515925-71515944 None:intergenic 15.0%
!! AATTTCATTGTTATCATAAT+TGG + chr5_2:71515954-71515973 None:intergenic 15.0%
!!! AGGATTTTTTTTTAATTCTT+AGG + chr5_2:71516249-71516268 None:intergenic 15.0%
!!! TAAATAATTTGTTTAGATAG+AGG + chr5_2:71516511-71516530 None:intergenic 15.0%
!!! TTAACTCTTTTTTTTTTTTG+AGG + chr5_2:71516787-71516806 None:intergenic 15.0%
!! AAAAAAAAAAAAGAGTTAAG+TGG - chr5_2:71516788-71516807 Msa0786090:intron 15.0%
!!! AATGATTAATACTTTGTTTT+TGG - chr5_2:71517873-71517892 Msa0786090:intron 15.0%
!!! ATGATTAATACTTTGTTTTT+GGG - chr5_2:71517874-71517893 Msa0786090:intron 15.0%
!! ATTAAATTTGATCTATATGT+TGG - chr5_2:71518064-71518083 Msa0786090:intron 15.0%
!! TATTGAATAACTAATGTATT+TGG - chr5_2:71518598-71518617 Msa0786090:intron 15.0%
!!! TCTTAACTTTTTTAATGTAA+TGG - chr5_2:71518738-71518757 Msa0786090:intron 15.0%
!!! CTTAACTTTTTTAATGTAAT+GGG - chr5_2:71518739-71518758 Msa0786090:intron 15.0%
!!! TTAACTTTTTTAATGTAATG+GGG - chr5_2:71518740-71518759 Msa0786090:intron 15.0%
!! AGATGATATTTAAATAATTG+TGG - chr5_2:71518869-71518888 Msa0786090:CDS 15.0%
!! TTGATCATTCAAAAAAAAAT+AGG - chr5_2:71518985-71519004 Msa0786090:CDS 15.0%
!! TGATCATTCAAAAAAAAATA+GGG - chr5_2:71518986-71519005 Msa0786090:CDS 15.0%
!!! CTTTATTGGTATTCTTTTTT+TGG - chr5_2:71515100-71515119 Msa0786090:three_prime_UTR 20.0%
!! AAAAAGAAGAATACCAATAA+AGG + chr5_2:71515167-71515186 None:intergenic 20.0%
!!! TTTATTGGTATTCTTCTTTT+TGG - chr5_2:71515166-71515185 Msa0786090:intron 20.0%
!! TCGAGAATAGTTTATAATTA+TGG - chr5_2:71515429-71515448 Msa0786090:CDS 20.0%
!! CGAGAATAGTTTATAATTAT+GGG - chr5_2:71515430-71515449 Msa0786090:CDS 20.0%
!! CTCAATGAAATTTACTTAAA+AGG + chr5_2:71515591-71515610 None:intergenic 20.0%
!!! GAAATTTTGAAATTTGATAG+GGG + chr5_2:71515902-71515921 None:intergenic 20.0%
!!! GGAAATTTTGAAATTTGATA+GGG + chr5_2:71515903-71515922 None:intergenic 20.0%
!!! TATAAATTCAAGATTTTTGG+GGG + chr5_2:71515924-71515943 None:intergenic 20.0%
!! AATAATGAAATTTAGCTAGA+AGG + chr5_2:71516134-71516153 None:intergenic 20.0%
!! TCTAGCTAAATTTCATTATT+TGG - chr5_2:71516134-71516153 Msa0786090:CDS 20.0%
!!! TTTTTTAATTCTTAGGTGTT+TGG + chr5_2:71516242-71516261 None:intergenic 20.0%
!!! AATTTTCAAATTTTGCAAGT+TGG - chr5_2:71516275-71516294 Msa0786090:CDS 20.0%
!!! ATTTTCAAATTTTGCAAGTT+GGG - chr5_2:71516276-71516295 Msa0786090:CDS 20.0%
!! TTGCACTTGAATAATTTATA+GGG + chr5_2:71516339-71516358 None:intergenic 20.0%
!!! GCAAATTTTGAAAAAATTGA+GGG + chr5_2:71516396-71516415 None:intergenic 20.0%
!!! TGCAAATTTTGAAAAAATTG+AGG + chr5_2:71516397-71516416 None:intergenic 20.0%
!!! TTTTTTCAAAATTTGCAGTT+TGG - chr5_2:71516400-71516419 Msa0786090:intron 20.0%
!! AATTTGAAGATTGAAAAGTA+AGG + chr5_2:71516427-71516446 None:intergenic 20.0%
!! TGTAATTGAATCATTTGAAT+TGG - chr5_2:71516548-71516567 Msa0786090:intron 20.0%
!!! TTTCATTTAATCTTTTGTTG+TGG + chr5_2:71516926-71516945 None:intergenic 20.0%
!! AAAATAAGCTAAAAATAGCT+TGG - chr5_2:71517006-71517025 Msa0786090:intron 20.0%
!! AAATAAGCTAAAAATAGCTT+GGG - chr5_2:71517007-71517026 Msa0786090:intron 20.0%
!!! TCTCAGTTTAATTTTTTTCA+TGG - chr5_2:71517331-71517350 Msa0786090:intron 20.0%
!! CTAAGATTTGATAAGAAAAA+TGG - chr5_2:71517560-71517579 Msa0786090:intron 20.0%
!! TACACAATCACTATAAAAAA+TGG + chr5_2:71517978-71517997 None:intergenic 20.0%
!! AAACTATAAATACCAACATA+AGG + chr5_2:71518518-71518537 None:intergenic 20.0%
!! GATCATTCAAAAAAAAATAG+GGG - chr5_2:71518987-71519006 Msa0786090:CDS 20.0%
!! TCAATGACAAAATATCTTAA+TGG - chr5_2:71519019-71519038 Msa0786090:exon 20.0%
!! TGCATATTTCTATTACCTAT+TGG + chr5_2:71515049-71515068 None:intergenic 25.0%
! GTAATAGAAATATGCACATT+TGG - chr5_2:71515053-71515072 Msa0786090:three_prime_UTR 25.0%
! AAAGAAAGAATTTGAAAACG+TGG + chr5_2:71515084-71515103 None:intergenic 25.0%
! TTTCCAAATTCTTCCTTTAT+TGG - chr5_2:71515151-71515170 Msa0786090:three_prime_UTR 25.0%
! ATACCAATAAAGGAAGAATT+TGG + chr5_2:71515157-71515176 None:intergenic 25.0%
!! AATTTAGCTTATTAGTGACT+AGG - chr5_2:71515213-71515232 Msa0786090:intron 25.0%
!! ATTTAGCTTATTAGTGACTA+GGG - chr5_2:71515214-71515233 Msa0786090:intron 25.0%
! TTCACCACTAGATTATTTAT+TGG - chr5_2:71515280-71515299 Msa0786090:CDS 25.0%
! TCACCACTAGATTATTTATT+GGG - chr5_2:71515281-71515300 Msa0786090:CDS 25.0%
! TTACCCAATAAATAATCTAG+TGG + chr5_2:71515287-71515306 None:intergenic 25.0%
! AAAATAAAAATGGTGTGACA+TGG - chr5_2:71515311-71515330 Msa0786090:CDS 25.0%
! TTTGGATGATTTAATGTACT+GGG - chr5_2:71515537-71515556 Msa0786090:CDS 25.0%
!!! TTTTTTCAAATCTTGCAAGT+TGG - chr5_2:71515732-71515751 Msa0786090:intron 25.0%
!!! GGGAAATTTTGAAATTTGAT+AGG + chr5_2:71515904-71515923 None:intergenic 25.0%
!!! AAAGTTCTAGGAAATTCAAA+TGG + chr5_2:71516033-71516052 None:intergenic 25.0%
! TGCACTTGAATAATTTATAG+GGG + chr5_2:71516338-71516357 None:intergenic 25.0%
! CTTGCACTTGAATAATTTAT+AGG + chr5_2:71516340-71516359 None:intergenic 25.0%
! TAAATTATTCAAGTGCAAGT+TGG - chr5_2:71516341-71516360 Msa0786090:intron 25.0%
! GAAAAAATTGAGGGTTAATT+TGG + chr5_2:71516387-71516406 None:intergenic 25.0%
!! TAAACACACTCTAAAAAGTT+AGG - chr5_2:71516610-71516629 Msa0786090:intron 25.0%
!! AAACACACTCTAAAAAGTTA+GGG - chr5_2:71516611-71516630 Msa0786090:intron 25.0%
! AATAAGCTAAAAATAGCTTG+GGG - chr5_2:71517008-71517027 Msa0786090:intron 25.0%
!! GATTAGTTGTATGAATTTCA+AGG - chr5_2:71517477-71517496 Msa0786090:intron 25.0%
!!! AAAGTTGATGGTAGAAAATA+AGG + chr5_2:71517788-71517807 None:intergenic 25.0%
!! AAGTGAATGTCTTATTAAGT+GGG - chr5_2:71518174-71518193 Msa0786090:intron 25.0%
!! GAACAACAAAAATATTGACT+TGG + chr5_2:71518310-71518329 None:intergenic 25.0%
!!! AATATTTTTGTTGTTCTTCC+AGG - chr5_2:71518314-71518333 Msa0786090:intron 25.0%
! AATATAAGGAGAAATTCAGA+TGG - chr5_2:71518347-71518366 Msa0786090:intron 25.0%
! ATATAAGGAGAAATTCAGAT+GGG - chr5_2:71518348-71518367 Msa0786090:intron 25.0%
!! AAAGATGGAAAACTTTTGAT+TGG - chr5_2:71518479-71518498 Msa0786090:intron 25.0%
! AGAATACAATATACTCTTTC+TGG - chr5_2:71518541-71518560 Msa0786090:intron 25.0%
! CAAAATATCTTAATGGAGTT+CGG - chr5_2:71519026-71519045 Msa0786090:exon 25.0%
!!! AGTCTTGTTTTTGATAGTCA+TGG - chr5_2:71514934-71514953 Msa0786090:intron 30.0%
GAAGTAAAGAGTAAAGTCAA+GGG + chr5_2:71515479-71515498 None:intergenic 30.0%
TGAAGTAAAGAGTAAAGTCA+AGG + chr5_2:71515480-71515499 None:intergenic 30.0%
! TAAGACACTAAAAGTGTGTT+TGG - chr5_2:71515519-71515538 Msa0786090:CDS 30.0%
GTTTGGATGATTTAATGTAC+TGG - chr5_2:71515536-71515555 Msa0786090:CDS 30.0%
GAATTTCTCTATGTTTAGCT+TGG + chr5_2:71515669-71515688 None:intergenic 30.0%
!! TCTAAGATTGGATGTTTTGA+GGG - chr5_2:71516099-71516118 Msa0786090:CDS 30.0%
TTAATTCTTAGGTGTTTGGA+TGG + chr5_2:71516238-71516257 None:intergenic 30.0%
! AGAGGTATACTAGATTTCAT+TGG + chr5_2:71516493-71516512 None:intergenic 30.0%
AAAAAAAGAGTTAAGTGGCA+TGG - chr5_2:71516793-71516812 Msa0786090:intron 30.0%
TAAAAGACTTAGACGTTGTT+TGG - chr5_2:71516834-71516853 Msa0786090:intron 30.0%
TATGTAGAAACACGTATGAT+TGG + chr5_2:71516895-71516914 None:intergenic 30.0%
AAACATACCCTTATTCTACA+AGG - chr5_2:71517116-71517135 Msa0786090:intron 30.0%
!! TCTCTACCTTTTGTTTCAAA+CGG - chr5_2:71517168-71517187 Msa0786090:intron 30.0%
! ATGAAACCGTTTGAAACAAA+AGG + chr5_2:71517177-71517196 None:intergenic 30.0%
CTGAAAACAGATAGAAGATT+AGG + chr5_2:71517227-71517246 None:intergenic 30.0%
TTATCAAATCTTAGTCCTAG+TGG + chr5_2:71517554-71517573 None:intergenic 30.0%
CAAAATGCAGATAAAGTTGA+TGG + chr5_2:71517800-71517819 None:intergenic 30.0%
! GAAGTGAATGTCTTATTAAG+TGG - chr5_2:71518173-71518192 Msa0786090:intron 30.0%
GAATTTCTCCTTATATTGTC+CGG + chr5_2:71518344-71518363 None:intergenic 30.0%
CTATAAAGTTGAGTGATGAA+GGG - chr5_2:71518399-71518418 Msa0786090:intron 30.0%
TATAAAGTTGAGTGATGAAG+GGG - chr5_2:71518400-71518419 Msa0786090:intron 30.0%
GAAATATTAGAAATCGTGGA+AGG - chr5_2:71518422-71518441 Msa0786090:intron 30.0%
!! TGGAAAACTTTTGATTGGAT+CGG - chr5_2:71518484-71518503 Msa0786090:intron 30.0%
! CATCTTTGCACTCTTTTCAT+CGG - chr5_2:71514837-71514856 Msa0786090:three_prime_UTR 35.0%
!!! TTTTCATCGGTTCCTATTTC+TGG - chr5_2:71514850-71514869 Msa0786090:three_prime_UTR 35.0%
CTATCAAAAACAAGACTCTC+CGG + chr5_2:71514931-71514950 None:intergenic 35.0%
!!! GTCGGATTTTGAAGTATGAA+GGG - chr5_2:71514986-71515005 Msa0786090:three_prime_UTR 35.0%
!!! TCGGATTTTGAAGTATGAAG+GGG - chr5_2:71514987-71515006 Msa0786090:three_prime_UTR 35.0%
AAAGGAAGAATTTGGAAACG+TGG + chr5_2:71515149-71515168 None:intergenic 35.0%
TTATTAGTGACTAGGGAGTA+GGG - chr5_2:71515221-71515240 Msa0786090:intron 35.0%
TAAAAATGGTGTGACATGGT+TGG - chr5_2:71515315-71515334 Msa0786090:CDS 35.0%
!! ACATGGTTGGTAGATGTTAA+GGG - chr5_2:71515328-71515347 Msa0786090:CDS 35.0%
!! GCAAATTTTGAGGGGTTAAA+TGG + chr5_2:71515872-71515891 None:intergenic 35.0%
ACCCCTCAAAATTTGCAAAT+CGG - chr5_2:71515876-71515895 Msa0786090:intron 35.0%
!! CATTCAAACACCTCTAAGAT+TGG - chr5_2:71516087-71516106 Msa0786090:CDS 35.0%
CTCAAAACATCCAATCTTAG+AGG + chr5_2:71516100-71516119 None:intergenic 35.0%
!!! CTCTAAGATTGGATGTTTTG+AGG - chr5_2:71516098-71516117 Msa0786090:CDS 35.0%
! CTCTAAAAAGTTAGGGTCAA+TGG - chr5_2:71516618-71516637 Msa0786090:intron 35.0%
GTCACTTGATCTATAACTTG+TGG + chr5_2:71516645-71516664 None:intergenic 35.0%
TCATGCCAAAATTGCTAGAT+CGG - chr5_2:71516667-71516686 Msa0786090:intron 35.0%
! AATGTCCGATCTAGCAATTT+TGG + chr5_2:71516675-71516694 None:intergenic 35.0%
ATCCACTTACATAAACCCTA+GGG + chr5_2:71517076-71517095 None:intergenic 35.0%
TATCCACTTACATAAACCCT+AGG + chr5_2:71517077-71517096 None:intergenic 35.0%
TTGCTTGCCTTGTAGAATAA+GGG + chr5_2:71517126-71517145 None:intergenic 35.0%
TTTGCTTGCCTTGTAGAATA+AGG + chr5_2:71517127-71517146 None:intergenic 35.0%
ATTGTTTGAGAATGCAAGCA+AGG - chr5_2:71517198-71517217 Msa0786090:intron 35.0%
!!! AATAGCTACTTTTTTGTCCG+AGG - chr5_2:71517366-71517385 Msa0786090:intron 35.0%
! AACCTTGTTGTACATATCCT+CGG + chr5_2:71517386-71517405 None:intergenic 35.0%
CAGAGTTAGAGGATATTTGT+GGG - chr5_2:71517525-71517544 Msa0786090:intron 35.0%
ATGTCATTGTTGAAGCGAAA+GGG + chr5_2:71517680-71517699 None:intergenic 35.0%
TTGTTCACTTGAGTTCAGAT+AGG - chr5_2:71517908-71517927 Msa0786090:intron 35.0%
TGTTCACTTGAGTTCAGATA+GGG - chr5_2:71517909-71517928 Msa0786090:intron 35.0%
!!! TGTTGGTCACTTTTGTTTGT+AGG - chr5_2:71518081-71518100 Msa0786090:intron 35.0%
!! ATTCCGCTTTTACTTCTTAG+CGG - chr5_2:71518107-71518126 Msa0786090:intron 35.0%
TTGCTTAAACAAACACCGTT+GGG + chr5_2:71518209-71518228 None:intergenic 35.0%
TTTGCTTAAACAAACACCGT+TGG + chr5_2:71518210-71518229 None:intergenic 35.0%
GGTGTTTGTTTAAGCAAAGA+CGG - chr5_2:71518212-71518231 Msa0786090:intron 35.0%
! GACGGTTTATTTCTTCTAGT+AGG - chr5_2:71518230-71518249 Msa0786090:intron 35.0%
! AAATTCAGATGGGCAGTTTT+GGG - chr5_2:71518358-71518377 Msa0786090:intron 35.0%
GCTATAAAGTTGAGTGATGA+AGG - chr5_2:71518398-71518417 Msa0786090:intron 35.0%
AGGGGAAATATTAGAAATCG+TGG - chr5_2:71518418-71518437 Msa0786090:intron 35.0%
AGTATTATACTACCCATGTC+AGG - chr5_2:71518701-71518720 Msa0786090:intron 35.0%
GTATTATACTACCCATGTCA+GGG - chr5_2:71518702-71518721 Msa0786090:intron 35.0%
TATTATACTACCCATGTCAG+GGG - chr5_2:71518703-71518722 Msa0786090:intron 35.0%
ATAAAAGAATCCCCTGACAT+GGG + chr5_2:71518716-71518735 None:intergenic 35.0%
AATAAAAGAATCCCCTGACA+TGG + chr5_2:71518717-71518736 None:intergenic 35.0%
! GTAATGGGGAGTAATTATGT+TGG - chr5_2:71518754-71518773 Msa0786090:intron 35.0%
TAATGGAGTTCGGAAAATGT+AGG - chr5_2:71519036-71519055 Msa0786090:five_prime_UTR 35.0%
! CGATGAAAAGAGTGCAAAGA+TGG + chr5_2:71514839-71514858 None:intergenic 40.0%
!! GGTTCCTATTTCTGGATCAA+AGG - chr5_2:71514858-71514877 Msa0786090:three_prime_UTR 40.0%
CTGTCCTTTGATCCAGAAAT+AGG + chr5_2:71514865-71514884 None:intergenic 40.0%
!! GTTTTTGATAGTCATGGCGA+AGG - chr5_2:71514940-71514959 Msa0786090:intron 40.0%
!!! GGTCGGATTTTGAAGTATGA+AGG - chr5_2:71514985-71515004 Msa0786090:three_prime_UTR 40.0%
!!! GATTTTGAAGTATGAAGGGG+AGG - chr5_2:71514990-71515009 Msa0786090:three_prime_UTR 40.0%
TTGCTGTCACTAGTTCCAAT+AGG - chr5_2:71515031-71515050 Msa0786090:three_prime_UTR 40.0%
CTTATTAGTGACTAGGGAGT+AGG - chr5_2:71515220-71515239 Msa0786090:intron 40.0%
GGAGTAGGGAGACTTAAATT+GGG - chr5_2:71515235-71515254 Msa0786090:intron 40.0%
!! GACATGGTTGGTAGATGTTA+AGG - chr5_2:71515327-71515346 Msa0786090:CDS 40.0%
GGAGTCTCTTAAGCATATGT+GGG - chr5_2:71515349-71515368 Msa0786090:CDS 40.0%
!!! GCCGATTTGCAAATTTTGAG+GGG + chr5_2:71515880-71515899 None:intergenic 40.0%
!!! GGCCGATTTGCAAATTTTGA+GGG + chr5_2:71515881-71515900 None:intergenic 40.0%
AAACCCTAGGGATACTGTTT+GGG + chr5_2:71517064-71517083 None:intergenic 40.0%
TAAACCCTAGGGATACTGTT+TGG + chr5_2:71517065-71517084 None:intergenic 40.0%
ATCCCTAGGGTTTATGTAAG+TGG - chr5_2:71517071-71517090 Msa0786090:intron 40.0%
AATTTCAAGGTCGAACTGTG+TGG - chr5_2:71517490-71517509 Msa0786090:intron 40.0%
CCACAAATATCCTCTAACTC+TGG + chr5_2:71517527-71517546 None:intergenic 40.0%
CCAGAGTTAGAGGATATTTG+TGG - chr5_2:71517524-71517543 Msa0786090:intron 40.0%
AGTTAGAGGATATTTGTGGG+AGG - chr5_2:71517528-71517547 Msa0786090:intron 40.0%
TACATTGTTGATGCCTACCT+TGG - chr5_2:71517590-71517609 Msa0786090:intron 40.0%
CATGTCATTGTTGAAGCGAA+AGG + chr5_2:71517681-71517700 None:intergenic 40.0%
CTTTCGCTTCAACAATGACA+TGG - chr5_2:71517679-71517698 Msa0786090:intron 40.0%
TCTCCGCTAAGAAGTAAAAG+CGG + chr5_2:71518113-71518132 None:intergenic 40.0%
! AGTGGGCTTAATTATCCCAA+CGG - chr5_2:71518191-71518210 Msa0786090:intron 40.0%
TAGGTGAAACTTCGACTTTC+CGG - chr5_2:71518249-71518268 Msa0786090:intron 40.0%
! ATTCTTCGACTTTGGCTTCA+TGG - chr5_2:71518272-71518291 Msa0786090:intron 40.0%
!! TATTGACTTGGCCAGCATTA+GGG + chr5_2:71518298-71518317 None:intergenic 40.0%
!! ATATTGACTTGGCCAGCATT+AGG + chr5_2:71518299-71518318 None:intergenic 40.0%
TGTTGTTCTTCCAGGTTATC+CGG - chr5_2:71518322-71518341 Msa0786090:intron 40.0%
CTTATATTGTCCGGATAACC+TGG + chr5_2:71518335-71518354 None:intergenic 40.0%
CAGGTTATCCGGACAATATA+AGG - chr5_2:71518333-71518352 Msa0786090:intron 40.0%
! GAAATTCAGATGGGCAGTTT+TGG - chr5_2:71518357-71518376 Msa0786090:intron 40.0%
CATGAGATATGTCAGTGAAG+CGG - chr5_2:71518451-71518470 Msa0786090:intron 40.0%
AGTGAAGCGGATGAAAAAGA+TGG - chr5_2:71518464-71518483 Msa0786090:intron 40.0%
!! TCGGTGTTAATGCCTTATGT+TGG - chr5_2:71518503-71518522 Msa0786090:intron 40.0%
ATGAGTTCAAACACGAACGA+AGG - chr5_2:71518926-71518945 Msa0786090:CDS 40.0%
GTGCAAGAAAAGTTGCAGCA+TGG + chr5_2:71514807-71514826 None:intergenic 45.0%
GGGAGTAGGGAGACTTAAAT+TGG - chr5_2:71515234-71515253 Msa0786090:intron 45.0%
GGGAGTCTCTTAAGCATATG+TGG - chr5_2:71515348-71515367 Msa0786090:CDS 45.0%
!!! GGGCCGATTTGCAAATTTTG+AGG + chr5_2:71515882-71515901 None:intergenic 45.0%
GCTAGATCGGACATTGTAAC+AGG - chr5_2:71516680-71516699 Msa0786090:intron 45.0%
AACAGGAGTTTCAACCCCAA+CGG - chr5_2:71516697-71516716 Msa0786090:intron 45.0%
TGAAAAATCACACGCCCAAG+TGG + chr5_2:71516728-71516747 None:intergenic 45.0%
TCTCCCAAACAGTATCCCTA+GGG - chr5_2:71517058-71517077 Msa0786090:intron 45.0%
GTCCGAGGATATGTACAACA+AGG - chr5_2:71517381-71517400 Msa0786090:intron 45.0%
TACTACGTTAAGGCCAAGGT+AGG + chr5_2:71517606-71517625 None:intergenic 45.0%
!! TACCTTGGCCTTAACGTAGT+AGG - chr5_2:71517605-71517624 Msa0786090:intron 45.0%
TTAACGTAGTAGGACCTGCA+GGG - chr5_2:71517615-71517634 Msa0786090:intron 45.0%
AGCTTCTGTTGCTAACTGTG+TGG + chr5_2:71517648-71517667 None:intergenic 45.0%
CAGTTAGCAACAGAAGCTGA+AGG - chr5_2:71517650-71517669 Msa0786090:intron 45.0%
CAAGCACAGTCTATCAGAGA+AGG - chr5_2:71517741-71517760 Msa0786090:intron 45.0%
CTTGAGTTCAGATAGGGAGA+TGG - chr5_2:71517915-71517934 Msa0786090:intron 45.0%
CTTCTTAGCGGAGACAAAAC+TGG - chr5_2:71518119-71518138 Msa0786090:intron 45.0%
TTAGCGGAGACAAAACTGGA+AGG - chr5_2:71518123-71518142 Msa0786090:intron 45.0%
CTTTCCGGATTCTTCGACTT+TGG - chr5_2:71518264-71518283 Msa0786090:intron 45.0%
GAAGCCAAAGTCGAAGAATC+CGG + chr5_2:71518271-71518290 None:intergenic 45.0%
CGCTTCACTGACATATCTCA+TGG + chr5_2:71518453-71518472 None:intergenic 45.0%
!!! CATTTTAATATTTATAAATA+TGG + chr5_2:71516305-71516324 None:intergenic 5.0%
!!! TTTTGTAAAAAAAAAAAAAA+AGG + chr5_2:71516453-71516472 None:intergenic 5.0%
!! AAAATGATTTATAATTTATA+TGG + chr5_2:71516960-71516979 None:intergenic 5.0%
!! AAAAAAAAATATTAATTGTA+AGG + chr5_2:71518018-71518037 None:intergenic 5.0%
TGGATCAAAGGACAGTCTCC+AGG - chr5_2:71514870-71514889 Msa0786090:three_prime_UTR 50.0%
GATCGGTTACTCCATGTCAC+CGG - chr5_2:71514895-71514914 Msa0786090:intron 50.0%
TCATGGCGAAGGACCATACA+CGG - chr5_2:71514951-71514970 Msa0786090:intron 50.0%
AAGTATGAAGGGGAGGAACG+TGG - chr5_2:71514997-71515016 Msa0786090:three_prime_UTR 50.0%
AAAATCACACGCCCAAGTGG+AGG + chr5_2:71516725-71516744 None:intergenic 50.0%
CTCTCCCAAACAGTATCCCT+AGG - chr5_2:71517057-71517076 Msa0786090:intron 50.0%
TCCATTCGCACCAGAGTTAG+AGG - chr5_2:71517514-71517533 Msa0786090:intron 50.0%
TCCTCTAACTCTGGTGCGAA+TGG + chr5_2:71517518-71517537 None:intergenic 50.0%
GATATTTGTGGGAGGCCACT+AGG - chr5_2:71517536-71517555 Msa0786090:intron 50.0%
GTCCTACTACGTTAAGGCCA+AGG + chr5_2:71517610-71517629 None:intergenic 50.0%
CTGCAGGTCCTACTACGTTA+AGG + chr5_2:71517616-71517635 None:intergenic 50.0%
CTTAACGTAGTAGGACCTGC+AGG - chr5_2:71517614-71517633 Msa0786090:intron 50.0%
TAACGTAGTAGGACCTGCAG+GGG - chr5_2:71517616-71517635 Msa0786090:intron 50.0%
GAGTTCAGATAGGGAGATGG+TGG - chr5_2:71517918-71517937 Msa0786090:intron 50.0%
! ATAGGGAGATGGTGGCTTTG+AGG - chr5_2:71517926-71517945 Msa0786090:intron 50.0%
AGGACAGTCTCCAGGCTGAT+CGG - chr5_2:71514878-71514897 Msa0786090:three_prime_UTR 55.0%
CATGGAGTAACCGATCAGCC+TGG + chr5_2:71514891-71514910 None:intergenic 55.0%
AACAAGACTCTCCGGCCCAA+CGG + chr5_2:71514923-71514942 None:intergenic 55.0%
CATGGCGAAGGACCATACAC+GGG - chr5_2:71514952-71514971 Msa0786090:intron 55.0%
ATGAAGGGGAGGAACGTGGT+TGG - chr5_2:71515001-71515020 Msa0786090:three_prime_UTR 55.0%
AACGTAGTAGGACCTGCAGG+GGG - chr5_2:71517617-71517636 Msa0786090:intron 55.0%
TGGCTTCATGGCCCTAATGC+TGG - chr5_2:71518284-71518303 Msa0786090:intron 55.0%
TCCATGTCACCGGAGCCGTT+GGG - chr5_2:71514905-71514924 Msa0786090:intron 60.0%
AGTAGGACCTGCAGGGGGTT+TGG - chr5_2:71517622-71517641 Msa0786090:intron 60.0%
CTCCATGTCACCGGAGCCGT+TGG - chr5_2:71514904-71514923 Msa0786090:intron 65.0%
CGAAGGACCATACACGGGCG+TGG - chr5_2:71514957-71514976 Msa0786090:intron 65.0%
AGGACCATACACGGGCGTGG+CGG - chr5_2:71514960-71514979 Msa0786090:intron 65.0%
ACCCCAACGGCTCCTCCACT+TGG - chr5_2:71516710-71516729 Msa0786090:intron 65.0%
CCCAAGTGGAGGAGCCGTTG+GGG + chr5_2:71516714-71516733 None:intergenic 65.0%
CCCCAACGGCTCCTCCACTT+GGG - chr5_2:71516711-71516730 Msa0786090:intron 65.0%
GCCCAAGTGGAGGAGCCGTT+GGG + chr5_2:71516715-71516734 None:intergenic 65.0%
TGTGTGGCCAAACCCCCTGC+AGG + chr5_2:71517632-71517651 None:intergenic 65.0%
GCCCAACGGCTCCGGTGACA+TGG + chr5_2:71514909-71514928 None:intergenic 70.0%
TGTCACCGGAGCCGTTGGGC+CGG - chr5_2:71514909-71514928 Msa0786090:intron 70.0%
ACTCTCCGGCCCAACGGCTC+CGG + chr5_2:71514917-71514936 None:intergenic 70.0%
CCATCCGCCACGCCCGTGTA+TGG + chr5_2:71514967-71514986 None:intergenic 70.0%
! CCATACACGGGCGTGGCGGA+TGG - chr5_2:71514964-71514983 Msa0786090:three_prime_UTR 70.0%
!! ACACGGGCGTGGCGGATGGT+CGG - chr5_2:71514968-71514987 Msa0786090:three_prime_UTR 70.0%
CGCCCAAGTGGAGGAGCCGT+TGG + chr5_2:71516716-71516735 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr5_2 gene 71514748 71519065 71514748 ID=Msa0786090;Name=Msa0786090
chr5_2 mRNA 71514748 71519065 71514748 ID=Msa0786090-mRNA-1;Parent=Msa0786090;Name=Msa0786090-mRNA-1;_AED=0.14;_eAED=0.14;_QI=36|1|1|1|0.5|0.4|5|415|323
chr5_2 exon 71514748 71514908 71514748 ID=Msa0786090-mRNA-1:exon:21607;Parent=Msa0786090-mRNA-1
chr5_2 exon 71514961 71515180 71514961 ID=Msa0786090-mRNA-1:exon:21606;Parent=Msa0786090-mRNA-1
chr5_2 exon 71515238 71515710 71515238 ID=Msa0786090-mRNA-1:exon:21605;Parent=Msa0786090-mRNA-1
chr5_2 exon 71516051 71516314 71516051 ID=Msa0786090-mRNA-1:exon:21604;Parent=Msa0786090-mRNA-1
chr5_2 exon 71518761 71519065 71518761 ID=Msa0786090-mRNA-1:exon:21603;Parent=Msa0786090-mRNA-1
chr5_2 five_prime_UTR 71519030 71519065 71519030 ID=Msa0786090-mRNA-1:five_prime_utr;Parent=Msa0786090-mRNA-1
chr5_2 CDS 71518761 71519029 71518761 ID=Msa0786090-mRNA-1:cds;Parent=Msa0786090-mRNA-1
chr5_2 CDS 71516051 71516314 71516051 ID=Msa0786090-mRNA-1:cds;Parent=Msa0786090-mRNA-1
chr5_2 CDS 71515272 71515710 71515272 ID=Msa0786090-mRNA-1:cds;Parent=Msa0786090-mRNA-1
chr5_2 three_prime_UTR 71515238 71515271 71515238 ID=Msa0786090-mRNA-1:three_prime_utr;Parent=Msa0786090-mRNA-1
chr5_2 three_prime_UTR 71514961 71515180 71514961 ID=Msa0786090-mRNA-1:three_prime_utr;Parent=Msa0786090-mRNA-1
chr5_2 three_prime_UTR 71514748 71514908 71514748 ID=Msa0786090-mRNA-1:three_prime_utr;Parent=Msa0786090-mRNA-1
Gene Sequence

>Msa0786090

ATGAACTTCAAAGACAGCATCCATGCTGCAACTTTTCTTGCACTCTTCTCTTCCATCTTTGCACTCTTTTCATCGGTTCCTATTTCTGGATCAAAGGACAGTCTCCAGGCTGATCGGTTACTCCATGTCACCGGAGCCGTTGGGCCGGAGAGTCTTGTTTTTGATAGTCATGGCGAAGGACCATACACGGGCGTGGCGGATGGTCGGATTTTGAAGTATGAAGGGGAGGAACGTGGTTGGACTGAATTTGCTGTCACTAGTTCCAATAGGTCGAACTGTGTGGTTCCATTCGCACCAGAGTTAGAGGATATTTGTGGGAGGCCACTAGGACTAAGATTTGATAAGAAAAATGGAGATTTGTACATTGTTGATGCCTACCTTGGCCTTAACGTAGTAGGACCTGCAGGGGGTTTGGCCACACAGTTAGCAACAGAAGCTGAAGGCACACCCTTTCGCTTCAACAATGACATGGACATTAGTGAAGATGAAGATGTGATTTACTTCACTGATTCAAGCACAGTCTATCAGAGAAGGCAAATTCCGCTTTTACTTCTTAGCGGAGACAAAACTGGAAGGTTAATGAAATATGACAAGTCAACGAGAGAAGTGAATGTCTTATTAAGTGGGCTTAATTATCCCAACGGTGTTTGTTTAAGCAAAGACGGTTTATTTCTTCTAGTAGGTGAAACTTCGACTTTCCGGATTCTTCGACTTTGGCTTCATGGCCCTAATGCTGGCCAAGTCAATATTTTTGTTGTTCTTCCAGGTTATCCGGACAATATAAGGAGAAATTCAGATGGGCAGTTTTGGGTTGCTTTGCATAATGCAGCTATAAAGTTGAGTGATGAAGGGGAAATATTAGAAATCGTGGAAGGAAAGACCATGAGATATGTCAGTGAAGCGGATGAAAAAGATGGAAAACTTTTGATTGGATCGGTGTTAATGCCTTATGTTGGTATTTATAGTTTATGA

Protein sequence

>Msa0786090

MNFKDSIHAATFLALFSSIFALFSSVPISGSKDSLQADRLLHVTGAVGPESLVFDSHGEGPYTGVADGRILKYEGEERGWTEFAVTSSNRSNCVVPFAPELEDICGRPLGLRFDKKNGDLYIVDAYLGLNVVGPAGGLATQLATEAEGTPFRFNNDMDISEDEDVIYFTDSSTVYQRRQIPLLLLSGDKTGRLMKYDKSTREVNVLLSGLNYPNGVCLSKDGLFLLVGETSTFRILRLWLHGPNAGQVNIFVVLPGYPDNIRRNSDGQFWVALHNAAIKLSDEGEILEIVEGKTMRYVSEADEKDGKLLIGSVLMPYVGIYSL*