Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0621380 | XP_003629427.1 | 98.611 | 72 | 1 | 0 | 1 | 72 | 1 | 72 | 1.16e-45 | 150 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0621380 | sp|F4JVB8|RADL1_ARATH | 66.154 | 65 | 21 | 1 | 5 | 68 | 14 | 78 | 1.39e-27 | 98.2 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0000220 | Msa0621380 | 0.846216 | 2.496845e-59 | -8.615850e-47 |
Msa0001460 | Msa0621380 | 0.825333 | 4.963747e-54 | -8.615850e-47 |
Msa0006580 | Msa0621380 | 0.800123 | 1.670294e-48 | -8.615850e-47 |
Msa0015370 | Msa0621380 | 0.819214 | 1.305924e-52 | -8.615850e-47 |
Msa0018870 | Msa0621380 | 0.813480 | 2.506028e-51 | -8.615850e-47 |
Msa0030400 | Msa0621380 | 0.810341 | 1.209592e-50 | -8.615850e-47 |
Msa0034320 | Msa0621380 | 0.816059 | 6.722636e-52 | -8.615850e-47 |
Msa0046700 | Msa0621380 | 0.809670 | 1.686946e-50 | -8.615850e-47 |
Msa0049990 | Msa0621380 | 0.825382 | 4.832160e-54 | -8.615850e-47 |
Msa0054760 | Msa0621380 | 0.807898 | 4.036924e-50 | -8.615850e-47 |
Msa0055530 | Msa0621380 | 0.800411 | 1.459599e-48 | -8.615850e-47 |
Msa0062750 | Msa0621380 | 0.801179 | 1.017224e-48 | -8.615850e-47 |
Msa0072710 | Msa0621380 | 0.804577 | 2.020847e-49 | -8.615850e-47 |
Msa0072910 | Msa0621380 | 0.819990 | 8.686772e-53 | -8.615850e-47 |
Msa0081300 | Msa0621380 | 0.800609 | 1.329870e-48 | -8.615850e-47 |
Msa0094670 | Msa0621380 | 0.829532 | 4.882768e-55 | -8.615850e-47 |
Msa0094990 | Msa0621380 | 0.804047 | 2.604963e-49 | -8.615850e-47 |
Msa0101150 | Msa0621380 | 0.835607 | 1.520638e-56 | -8.615850e-47 |
Msa0101210 | Msa0621380 | 0.837273 | 5.730572e-57 | -8.615850e-47 |
Msa0109070 | Msa0621380 | 0.811174 | 7.988464e-51 | -8.615850e-47 |
Msa0115950 | Msa0621380 | 0.817139 | 3.850380e-52 | -8.615850e-47 |
Msa0604700 | Msa0621380 | 0.807660 | 4.535207e-50 | -8.615850e-47 |
Msa0606140 | Msa0621380 | 0.813216 | 2.863125e-51 | -8.615850e-47 |
Msa0607300 | Msa0621380 | 0.823532 | 1.316557e-53 | -8.615850e-47 |
Msa0607440 | Msa0621380 | 0.829141 | 6.077893e-55 | -8.615850e-47 |
Msa0621380 | Msa0621390 | 0.951397 | 2.225000e-109 | -8.615850e-47 |
Msa0621380 | Msa0621400 | 0.801615 | 8.283953e-49 | -8.615850e-47 |
Msa0621380 | Msa0621410 | 0.869783 | 2.390240e-66 | -8.615850e-47 |
Msa0621380 | Msa0629500 | 0.810736 | 9.939832e-51 | -8.615850e-47 |
Msa0621380 | Msa0635130 | 0.815015 | 1.147703e-51 | -8.615850e-47 |
Msa0621380 | Msa0635350 | 0.811267 | 7.626042e-51 | -8.615850e-47 |
Msa0621380 | Msa0637850 | 0.803848 | 2.865844e-49 | -8.615850e-47 |
Msa0621380 | Msa0639420 | 0.805008 | 1.642789e-49 | -8.615850e-47 |
Msa0621380 | Msa0643800 | 0.804207 | 2.413433e-49 | -8.615850e-47 |
Msa0621380 | Msa0645820 | 0.805826 | 1.106428e-49 | -8.615850e-47 |
Msa0621380 | Msa0647110 | 0.800442 | 1.438781e-48 | -8.615850e-47 |
Msa0621380 | Msa0650360 | 0.825016 | 5.897198e-54 | -8.615850e-47 |
Msa0621380 | Msa0657820 | 0.803136 | 4.025558e-49 | -8.615850e-47 |
Msa0621380 | Msa0672350 | 0.810809 | 9.583176e-51 | -8.615850e-47 |
Msa0621380 | Msa0683650 | 0.820544 | 6.483678e-53 | -8.615850e-47 |
Msa0621380 | Msa0687540 | 0.818183 | 2.238371e-52 | -8.615850e-47 |
Msa0621380 | Msa0687620 | 0.819061 | 1.415275e-52 | -8.615850e-47 |
Msa0621380 | Msa0688760 | 0.833940 | 3.995107e-56 | -8.615850e-47 |
Msa0621380 | Msa0690350 | 0.817380 | 3.397759e-52 | -8.615850e-47 |
Msa0621380 | Msa0692910 | 0.811907 | 5.535571e-51 | -8.615850e-47 |
Msa0621380 | Msa0707780 | 0.809084 | 2.253709e-50 | -8.615850e-47 |
Msa0621380 | Msa0710950 | 0.824515 | 7.739744e-54 | -8.615850e-47 |
Msa0621380 | Msa0712440 | 0.809235 | 2.091520e-50 | -8.615850e-47 |
Msa0621380 | Msa0719340 | 0.814016 | 1.909182e-51 | -8.615850e-47 |
Msa0621380 | Msa0720850 | 0.819724 | 9.995489e-53 | -8.615850e-47 |
Msa0621380 | Msa0730180 | 0.828760 | 7.513715e-55 | -8.615850e-47 |
Msa0621380 | Msa0753530 | 0.824965 | 6.063821e-54 | -8.615850e-47 |
Msa0621380 | Msa0756480 | 0.813042 | 3.126909e-51 | -8.615850e-47 |
Msa0621380 | Msa0757990 | -0.816329 | 5.850816e-52 | -8.615850e-47 |
Msa0621380 | Msa0761930 | 0.827868 | 1.233133e-54 | -8.615850e-47 |
Msa0621380 | Msa0766540 | 0.823090 | 1.669981e-53 | -8.615850e-47 |
Msa0621380 | Msa0770430 | 0.815272 | 1.006642e-51 | -8.615850e-47 |
Msa0621380 | Msa0772150 | 0.817595 | 3.040039e-52 | -8.615850e-47 |
Msa0621380 | Msa0775090 | 0.811218 | 7.814075e-51 | -8.615850e-47 |
Msa0621380 | Msa0786090 | 0.816337 | 5.824771e-52 | -8.615850e-47 |
Msa0621380 | Msa0800130 | 0.800644 | 1.308651e-48 | -8.615850e-47 |
Msa0621380 | Msa0801390 | 0.801710 | 7.918012e-49 | -8.615850e-47 |
Msa0621380 | Msa0807170 | 0.805264 | 1.451579e-49 | -8.615850e-47 |
Msa0621380 | Msa0808420 | 0.826250 | 3.007701e-54 | -8.615850e-47 |
Msa0621380 | Msa0812450 | 0.800763 | 1.237206e-48 | -8.615850e-47 |
Msa0621380 | Msa0829570 | 0.832833 | 7.542293e-56 | -8.615850e-47 |
Msa0621380 | Msa0830120 | 0.803183 | 3.936661e-49 | -8.615850e-47 |
Msa0621380 | Msa0830450 | 0.804560 | 2.036900e-49 | -8.615850e-47 |
Msa0621380 | Msa0835510 | 0.814128 | 1.803837e-51 | -8.615850e-47 |
Msa0621380 | Msa0836200 | 0.812207 | 4.761922e-51 | -8.615850e-47 |
Msa0621380 | Msa0839730 | 0.838857 | 2.241892e-57 | -8.615850e-47 |
Msa0621380 | Msa0840630 | 0.806811 | 6.862700e-50 | -8.615850e-47 |
Msa0621380 | Msa0846180 | 0.833000 | 6.855881e-56 | -8.615850e-47 |
Msa0621380 | Msa0864150 | 0.805128 | 1.550131e-49 | -8.615850e-47 |
Msa0621380 | Msa0873830 | 0.802162 | 6.393342e-49 | -8.615850e-47 |
Msa0621380 | Msa0875130 | 0.842448 | 2.570427e-58 | -8.615850e-47 |
Msa0621380 | Msa0881050 | 0.827955 | 1.175160e-54 | -8.615850e-47 |
Msa0621380 | Msa0899140 | 0.808550 | 2.931211e-50 | -8.615850e-47 |
Msa0621380 | Msa0901140 | 0.840262 | 9.667080e-58 | -8.615850e-47 |
Msa0621380 | Msa0905450 | 0.806922 | 6.502434e-50 | -8.615850e-47 |
Msa0621380 | Msa0931730 | 0.832606 | 8.586294e-56 | -8.615850e-47 |
Msa0621380 | Msa0968450 | 0.846370 | 2.267116e-59 | -8.615850e-47 |
Msa0621380 | Msa0974660 | 0.801857 | 7.387555e-49 | -8.615850e-47 |
Msa0621380 | Msa0976950 | 0.814130 | 1.801861e-51 | -8.615850e-47 |
Msa0621380 | Msa1000470 | 0.848372 | 6.391040e-60 | -8.615850e-47 |
Msa0621380 | Msa1002980 | 0.818401 | 1.997937e-52 | -8.615850e-47 |
Msa0621380 | Msa1016110 | 0.814732 | 1.326306e-51 | -8.615850e-47 |
Msa0621380 | Msa1028210 | 0.801130 | 1.041005e-48 | -8.615850e-47 |
Msa0621380 | Msa1030440 | 0.811336 | 7.368819e-51 | -8.615850e-47 |
Msa0621380 | Msa1031650 | 0.813628 | 2.324224e-51 | -8.615850e-47 |
Msa0621380 | Msa1033160 | 0.815837 | 7.532122e-52 | -8.615850e-47 |
Msa0621380 | Msa1044040 | 0.818432 | 1.966506e-52 | -8.615850e-47 |
Msa0621380 | Msa1052600 | 0.809650 | 1.703538e-50 | -8.615850e-47 |
Msa0621380 | Msa1058980 | 0.801620 | 8.261924e-49 | -8.615850e-47 |
Msa0621380 | Msa1067430 | 0.814858 | 1.243800e-51 | -8.615850e-47 |
Msa0621380 | Msa1070900 | 0.800820 | 1.204650e-48 | -8.615850e-47 |
Msa0621380 | Msa1070930 | 0.817348 | 3.454878e-52 | -8.615850e-47 |
Msa0621380 | Msa1072080 | 0.817700 | 2.878248e-52 | -8.615850e-47 |
Msa0621380 | Msa1074630 | 0.808838 | 2.544275e-50 | -8.615850e-47 |
Msa0621380 | Msa1080620 | 0.805892 | 1.071835e-49 | -8.615850e-47 |
Msa0621380 | Msa1080690 | 0.802553 | 5.312951e-49 | -8.615850e-47 |
Msa0621380 | Msa1081700 | 0.818397 | 2.002277e-52 | -8.615850e-47 |
Msa0621380 | Msa1081850 | 0.804636 | 1.964335e-49 | -8.615850e-47 |
Msa0621380 | Msa1092430 | 0.812368 | 4.391143e-51 | -8.615850e-47 |
Msa0621380 | Msa1093390 | 0.809105 | 2.229874e-50 | -8.615850e-47 |
Msa0621380 | Msa1130070 | 0.827548 | 1.471874e-54 | -8.615850e-47 |
Msa0621380 | Msa1130650 | 0.812211 | 4.751069e-51 | -8.615850e-47 |
Msa0621380 | Msa1132820 | 0.802565 | 5.280954e-49 | -8.615850e-47 |
Msa0621380 | Msa1151120 | 0.807352 | 5.271969e-50 | -8.615850e-47 |
Msa0621380 | Msa1154130 | 0.806826 | 6.811503e-50 | -8.615850e-47 |
Msa0621380 | Msa1161160 | 0.830620 | 2.650806e-55 | -8.615850e-47 |
Msa0621380 | Msa1166020 | 0.815486 | 9.020965e-52 | -8.615850e-47 |
Msa0621380 | Msa1184640 | 0.815440 | 9.236486e-52 | -8.615850e-47 |
Msa0621380 | Msa1199690 | 0.804979 | 1.665163e-49 | -8.615850e-47 |
Msa0621380 | Msa1206630 | -0.802797 | 4.730087e-49 | -8.615850e-47 |
Msa0621380 | Msa1207280 | 0.815173 | 1.058578e-51 | -8.615850e-47 |
Msa0621380 | Msa1209390 | 0.807186 | 5.717266e-50 | -8.615850e-47 |
Msa0621380 | Msa1209650 | 0.819516 | 1.114793e-52 | -8.615850e-47 |
Msa0621380 | Msa1214900 | 0.844514 | 7.211115e-59 | -8.615850e-47 |
Msa0621380 | Msa1215770 | 0.804351 | 2.252787e-49 | -8.615850e-47 |
Msa0621380 | Msa1222580 | 0.803823 | 2.899836e-49 | -8.615850e-47 |
Msa0621380 | Msa1223600 | 0.802311 | 5.957496e-49 | -8.615850e-47 |
Msa0621380 | Msa1224150 | 0.803172 | 3.957653e-49 | -8.615850e-47 |
Msa0621380 | Msa1228880 | 0.803008 | 4.277840e-49 | -8.615850e-47 |
Msa0621380 | Msa1229050 | 0.805373 | 1.377515e-49 | -8.615850e-47 |
Msa0621380 | Msa1233770 | 0.812978 | 3.229593e-51 | -8.615850e-47 |
Msa0621380 | Msa1236090 | 0.802968 | 4.361539e-49 | -8.615850e-47 |
Msa0621380 | Msa1243860 | 0.834139 | 3.562433e-56 | -8.615850e-47 |
Msa0621380 | Msa1254990 | 0.829852 | 4.082911e-55 | -8.615850e-47 |
Msa0621380 | Msa1255110 | 0.840180 | 1.015819e-57 | -8.615850e-47 |
Msa0621380 | Msa1255120 | 0.970261 | 2.388997e-131 | -8.615850e-47 |
Msa0621380 | Msa1255130 | 0.837291 | 5.667097e-57 | -8.615850e-47 |
Msa0621380 | Msa1255140 | 0.821337 | 4.260358e-53 | -8.615850e-47 |
Msa0621380 | Msa1257520 | 0.807723 | 4.398327e-50 | -8.615850e-47 |
Msa0621380 | Msa1258770 | 0.850091 | 2.124355e-60 | -8.615850e-47 |
Msa0621380 | Msa1271490 | 0.804551 | 2.046251e-49 | -8.615850e-47 |
Msa0621380 | Msa1276080 | 0.807960 | 3.915604e-50 | -8.615850e-47 |
Msa0621380 | Msa1279240 | 0.800950 | 1.133274e-48 | -8.615850e-47 |
Msa0621380 | Msa1279340 | 0.807368 | 5.229641e-50 | -8.615850e-47 |
Msa0621380 | Msa1280020 | 0.817354 | 3.445255e-52 | -8.615850e-47 |
Msa0621380 | Msa1295560 | 0.841869 | 3.657498e-58 | -8.615850e-47 |
Msa0621380 | Msa1295570 | 0.969843 | 1.011126e-130 | -8.615850e-47 |
Msa0621380 | Msa1295580 | 0.936962 | 7.481437e-98 | -8.615850e-47 |
Msa0621380 | Msa1295590 | 0.822649 | 2.116370e-53 | -8.615850e-47 |
Msa0621380 | Msa1295600 | 0.860762 | 1.647771e-63 | -8.615850e-47 |
Msa0621380 | Msa1298740 | 0.824136 | 9.503735e-54 | -8.615850e-47 |
Msa0621380 | Msa1302750 | 0.808081 | 3.689604e-50 | -8.615850e-47 |
Msa0621380 | Msa1325980 | 0.816738 | 4.736640e-52 | -8.615850e-47 |
Msa0621380 | Msa1326000 | 0.802791 | 4.744220e-49 | -8.615850e-47 |
Msa0621380 | Msa1329290 | 0.801417 | 9.094613e-49 | -8.615850e-47 |
Msa0621380 | Msa1330280 | 0.858155 | 9.999254e-63 | -8.615850e-47 |
Msa0621380 | Msa1331900 | 0.813211 | 2.871613e-51 | -8.615850e-47 |
Msa0621380 | Msa1344940 | 0.848109 | 7.556353e-60 | -8.615850e-47 |
Msa0621380 | Msa1345120 | 0.805775 | 1.134146e-49 | -8.615850e-47 |
Msa0621380 | Msa1353270 | 0.811334 | 7.374044e-51 | -8.615850e-47 |
Msa0621380 | Msa1356680 | 0.801179 | 1.017452e-48 | -8.615850e-47 |
Msa0621380 | Msa1361090 | 0.817876 | 2.626539e-52 | -8.615850e-47 |
Msa0621380 | Msa1366400 | 0.810033 | 1.409527e-50 | -8.615850e-47 |
Msa0621380 | Msa1366700 | 0.810897 | 9.173866e-51 | -8.615850e-47 |
Msa0621380 | Msa1367600 | 0.809456 | 1.875363e-50 | -8.615850e-47 |
Msa0621380 | Msa1368730 | 0.819186 | 1.325753e-52 | -8.615850e-47 |
Msa0621380 | Msa1369900 | 0.853737 | 1.960436e-61 | -8.615850e-47 |
Msa0621380 | Msa1371840 | 0.801636 | 8.199281e-49 | -8.615850e-47 |
Msa0621380 | Msa1373500 | 0.800890 | 1.165760e-48 | -8.615850e-47 |
Msa0621380 | Msa1374810 | 0.823361 | 1.444066e-53 | -8.615850e-47 |
Msa0621380 | Msa1379370 | 0.802962 | 4.374296e-49 | -8.615850e-47 |
Msa0621380 | Msa1387650 | 0.803915 | 2.774813e-49 | -8.615850e-47 |
Msa0621380 | Msa1393720 | 0.805126 | 1.551570e-49 | -8.615850e-47 |
Msa0621380 | Msa1396310 | 0.814130 | 1.801502e-51 | -8.615850e-47 |
Msa0621380 | Msa1397110 | 0.803190 | 3.924510e-49 | -8.615850e-47 |
Msa0621380 | Msa1403900 | 0.812163 | 4.868630e-51 | -8.615850e-47 |
Msa0621380 | Msa1404370 | 0.801198 | 1.008316e-48 | -8.615850e-47 |
Msa0621380 | Msa1406550 | 0.813896 | 2.029727e-51 | -8.615850e-47 |
Msa0621380 | Msa1406880 | 0.822668 | 2.094582e-53 | -8.615850e-47 |
Msa0621380 | Msa1407710 | 0.822064 | 2.892572e-53 | -8.615850e-47 |
Msa0621380 | Msa1408190 | 0.813062 | 3.095564e-51 | -8.615850e-47 |
Msa0621380 | Msa1415250 | 0.813876 | 2.050550e-51 | -8.615850e-47 |
Msa0621380 | Msa1416460 | 0.812811 | 3.513619e-51 | -8.615850e-47 |
Msa0621380 | Msa1420130 | 0.807628 | 4.606881e-50 | -8.615850e-47 |
Msa0621380 | Msa1422490 | 0.802218 | 6.226751e-49 | -8.615850e-47 |
Msa0621380 | Msa1422500 | 0.804725 | 1.882040e-49 | -8.615850e-47 |
Msa0621380 | Msa1423550 | 0.800358 | 1.495955e-48 | -8.615850e-47 |
Msa0621380 | Msa1424240 | 0.800339 | 1.509387e-48 | -8.615850e-47 |
Msa0621380 | Msa1428990 | 0.803696 | 3.081620e-49 | -8.615850e-47 |
Msa0621380 | Msa1430270 | 0.805600 | 1.234238e-49 | -8.615850e-47 |
Msa0621380 | Msa1432350 | 0.832470 | 9.279311e-56 | -8.615850e-47 |
Msa0621380 | Msa1435910 | 0.812575 | 3.957595e-51 | -8.615850e-47 |
Msa0621380 | Msa1448990 | 0.813562 | 2.403661e-51 | -8.615850e-47 |
Msa0621380 | Msa1449510 | 0.804263 | 2.348785e-49 | -8.615850e-47 |
Msa0621380 | Msa1449680 | 0.816185 | 6.299056e-52 | -8.615850e-47 |
Msa0621380 | Msa1450420 | 0.822699 | 2.060015e-53 | -8.615850e-47 |
Msa0621380 | Msa1451840 | 0.820666 | 6.080901e-53 | -8.615850e-47 |
Msa0621380 | Msa1459590 | 0.816941 | 4.266266e-52 | -8.615850e-47 |
Msa0621380 | Msa1464800 | 0.813420 | 2.582420e-51 | -8.615850e-47 |
Msa0121080 | Msa0621380 | 0.804854 | 1.768780e-49 | -8.615850e-47 |
Msa0131390 | Msa0621380 | 0.836702 | 8.015193e-57 | -8.615850e-47 |
Msa0139050 | Msa0621380 | 0.812274 | 4.604605e-51 | -8.615850e-47 |
Msa0144340 | Msa0621380 | 0.802661 | 5.047146e-49 | -8.615850e-47 |
Msa0144510 | Msa0621380 | 0.802833 | 4.649784e-49 | -8.615850e-47 |
Msa0147990 | Msa0621380 | 0.836303 | 1.012698e-56 | -8.615850e-47 |
Msa0153640 | Msa0621380 | 0.801908 | 7.210113e-49 | -8.615850e-47 |
Msa0159200 | Msa0621380 | 0.801104 | 1.054047e-48 | -8.615850e-47 |
Msa0162070 | Msa0621380 | 0.804259 | 2.353423e-49 | -8.615850e-47 |
Msa0168960 | Msa0621380 | 0.803445 | 3.474145e-49 | -8.615850e-47 |
Msa0173610 | Msa0621380 | 0.819831 | 9.448105e-53 | -8.615850e-47 |
Msa0173760 | Msa0621380 | 0.804581 | 2.016689e-49 | -8.615850e-47 |
Msa0173850 | Msa0621380 | 0.811643 | 6.318113e-51 | -8.615850e-47 |
Msa0176710 | Msa0621380 | 0.813431 | 2.568517e-51 | -8.615850e-47 |
Msa0177490 | Msa0621380 | 0.838779 | 2.348203e-57 | -8.615850e-47 |
Msa0181020 | Msa0621380 | 0.810272 | 1.251849e-50 | -8.615850e-47 |
Msa0185550 | Msa0621380 | 0.823385 | 1.424950e-53 | -8.615850e-47 |
Msa0192020 | Msa0621380 | 0.814375 | 1.590872e-51 | -8.615850e-47 |
Msa0197900 | Msa0621380 | 0.802993 | 4.308594e-49 | -8.615850e-47 |
Msa0203330 | Msa0621380 | 0.808421 | 3.123514e-50 | -8.615850e-47 |
Msa0206600 | Msa0621380 | 0.809282 | 2.044100e-50 | -8.615850e-47 |
Msa0206940 | Msa0621380 | 0.805613 | 1.226872e-49 | -8.615850e-47 |
Msa0206970 | Msa0621380 | 0.803022 | 4.250512e-49 | -8.615850e-47 |
Msa0217470 | Msa0621380 | 0.822365 | 2.463606e-53 | -8.615850e-47 |
Msa0224960 | Msa0621380 | 0.803206 | 3.893091e-49 | -8.615850e-47 |
Msa0226800 | Msa0621380 | 0.811576 | 6.535168e-51 | -8.615850e-47 |
Msa0371870 | Msa0621380 | 0.803081 | 4.133475e-49 | -8.615850e-47 |
Msa0372250 | Msa0621380 | 0.804671 | 1.931190e-49 | -8.615850e-47 |
Msa0379390 | Msa0621380 | 0.803630 | 3.180930e-49 | -8.615850e-47 |
Msa0380360 | Msa0621380 | 0.819278 | 1.263193e-52 | -8.615850e-47 |
Msa0380430 | Msa0621380 | 0.812478 | 4.155318e-51 | -8.615850e-47 |
Msa0380520 | Msa0621380 | 0.804052 | 2.599506e-49 | -8.615850e-47 |
Msa0386390 | Msa0621380 | 0.820276 | 7.469846e-53 | -8.615850e-47 |
Msa0394330 | Msa0621380 | 0.806593 | 7.629433e-50 | -8.615850e-47 |
Msa0396970 | Msa0621380 | 0.805993 | 1.020619e-49 | -8.615850e-47 |
Msa0397000 | Msa0621380 | 0.804930 | 1.705583e-49 | -8.615850e-47 |
Msa0403670 | Msa0621380 | 0.850071 | 2.152011e-60 | -8.615850e-47 |
Msa0405040 | Msa0621380 | 0.846042 | 2.783469e-59 | -8.615850e-47 |
Msa0421100 | Msa0621380 | 0.837850 | 4.073867e-57 | -8.615850e-47 |
Msa0423590 | Msa0621380 | 0.802243 | 6.152628e-49 | -8.615850e-47 |
Msa0423600 | Msa0621380 | 0.820956 | 5.213314e-53 | -8.615850e-47 |
Msa0426480 | Msa0621380 | 0.808944 | 2.415088e-50 | -8.615850e-47 |
Msa0427590 | Msa0621380 | 0.804792 | 1.822102e-49 | -8.615850e-47 |
Msa0432390 | Msa0621380 | 0.808912 | 2.452430e-50 | -8.615850e-47 |
Msa0434630 | Msa0621380 | 0.820573 | 6.385030e-53 | -8.615850e-47 |
Msa0438440 | Msa0621380 | 0.810250 | 1.265820e-50 | -8.615850e-47 |
Msa0446480 | Msa0621380 | 0.820138 | 8.034265e-53 | -8.615850e-47 |
Msa0455200 | Msa0621380 | 0.820439 | 6.857038e-53 | -8.615850e-47 |
Msa0466340 | Msa0621380 | 0.805048 | 1.610849e-49 | -8.615850e-47 |
Msa0470650 | Msa0621380 | 0.802071 | 6.675724e-49 | -8.615850e-47 |
Msa0471090 | Msa0621380 | 0.810653 | 1.035811e-50 | -8.615850e-47 |
Msa0475740 | Msa0621380 | 0.807775 | 4.287014e-50 | -8.615850e-47 |
Msa0476150 | Msa0621380 | 0.824387 | 8.297573e-54 | -8.615850e-47 |
Msa0476180 | Msa0621380 | 0.834278 | 3.288268e-56 | -8.615850e-47 |
Msa0479790 | Msa0621380 | 0.818792 | 1.629098e-52 | -8.615850e-47 |
Msa0482020 | Msa0621380 | 0.807914 | 4.005758e-50 | -8.615850e-47 |
Msa0244320 | Msa0621380 | 0.806575 | 7.697200e-50 | -8.615850e-47 |
Msa0258380 | Msa0621380 | 0.826255 | 2.998323e-54 | -8.615850e-47 |
Msa0258410 | Msa0621380 | 0.807713 | 4.419316e-50 | -8.615850e-47 |
Msa0269830 | Msa0621380 | 0.810565 | 1.082003e-50 | -8.615850e-47 |
Msa0282860 | Msa0621380 | 0.803761 | 2.987203e-49 | -8.615850e-47 |
Msa0288360 | Msa0621380 | 0.802114 | 6.540273e-49 | -8.615850e-47 |
Msa0296610 | Msa0621380 | 0.816549 | 5.221129e-52 | -8.615850e-47 |
Msa0304020 | Msa0621380 | 0.804404 | 2.195868e-49 | -8.615850e-47 |
Msa0305810 | Msa0621380 | 0.805008 | 1.642008e-49 | -8.615850e-47 |
Msa0312780 | Msa0621380 | 0.823402 | 1.412294e-53 | -8.615850e-47 |
Msa0321230 | Msa0621380 | 0.812361 | 4.406863e-51 | -8.615850e-47 |
Msa0327900 | Msa0621380 | 0.804657 | 1.944229e-49 | -8.615850e-47 |
Msa0330370 | Msa0621380 | 0.801197 | 1.008675e-48 | -8.615850e-47 |
Msa0335740 | Msa0621380 | 0.802209 | 6.252914e-49 | -8.615850e-47 |
Msa0342620 | Msa0621380 | 0.814165 | 1.770290e-51 | -8.615850e-47 |
Msa0352200 | Msa0621380 | 0.826846 | 2.168144e-54 | -8.615850e-47 |
Msa0362840 | Msa0621380 | 0.827831 | 1.259095e-54 | -8.615850e-47 |
Msa0489620 | Msa0621380 | 0.813671 | 2.274522e-51 | -8.615850e-47 |
Msa0498320 | Msa0621380 | 0.831624 | 1.502522e-55 | -8.615850e-47 |
Msa0503120 | Msa0621380 | 0.819278 | 1.263193e-52 | -8.615850e-47 |
Msa0512130 | Msa0621380 | 0.825030 | 5.854892e-54 | -8.615850e-47 |
Msa0513660 | Msa0621380 | 0.831393 | 1.712850e-55 | -8.615850e-47 |
Msa0515830 | Msa0621380 | 0.821265 | 4.427063e-53 | -8.615850e-47 |
Msa0524510 | Msa0621380 | 0.840067 | 1.087100e-57 | -8.615850e-47 |
Msa0528170 | Msa0621380 | 0.830108 | 3.535531e-55 | -8.615850e-47 |
Msa0528740 | Msa0621380 | 0.830266 | 3.234768e-55 | -8.615850e-47 |
Msa0539320 | Msa0621380 | 0.806866 | 6.682058e-50 | -8.615850e-47 |
Msa0542040 | Msa0621380 | 0.815744 | 7.902110e-52 | -8.615850e-47 |
Msa0547780 | Msa0621380 | 0.820021 | 8.544833e-53 | -8.615850e-47 |
Msa0553230 | Msa0621380 | 0.814356 | 1.606354e-51 | -8.615850e-47 |
Msa0553350 | Msa0621380 | 0.823253 | 1.529926e-53 | -8.615850e-47 |
Msa0553520 | Msa0621380 | 0.808479 | 3.036018e-50 | -8.615850e-47 |
Msa0555980 | Msa0621380 | 0.819927 | 8.981589e-53 | -8.615850e-47 |
Msa0557770 | Msa0621380 | 0.802246 | 6.146181e-49 | -8.615850e-47 |
Msa0567290 | Msa0621380 | 0.807619 | 4.626810e-50 | -8.615850e-47 |
Msa0568810 | Msa0621380 | 0.815738 | 7.926347e-52 | -8.615850e-47 |
Msa0574170 | Msa0621380 | 0.817226 | 3.680441e-52 | -8.615850e-47 |
Msa0576420 | Msa0621380 | 0.803649 | 3.151343e-49 | -8.615850e-47 |
Msa0581190 | Msa0621380 | 0.815494 | 8.985047e-52 | -8.615850e-47 |
Msa0583930 | Msa0621380 | 0.817996 | 2.467924e-52 | -8.615850e-47 |
Msa0589290 | Msa0621380 | 0.800423 | 1.451405e-48 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0621380 | MtrunA17_Chr8g0373111 | 98.611 | 72 | 1 | 0 | 1 | 72 | 1 | 72 | 1.06e-49 | 150 |
Msa0621380 | MtrunA17_Chr8g0373121 | 98.611 | 72 | 1 | 0 | 1 | 72 | 1 | 72 | 1.06e-49 | 150 |
Msa0621380 | MtrunA17_Chr8g0373131 | 97.222 | 72 | 2 | 0 | 1 | 72 | 1 | 72 | 3.36e-49 | 149 |
Msa0621380 | MtrunA17_Chr5g0404301 | 82.258 | 62 | 11 | 0 | 3 | 64 | 2 | 63 | 1.06e-35 | 114 |
Msa0621380 | MtrunA17_Chr8g0373101 | 68.571 | 70 | 21 | 1 | 1 | 70 | 1 | 69 | 3.10e-32 | 106 |
Msa0621380 | MtrunA17_Chr3g0144631 | 64.615 | 65 | 22 | 1 | 5 | 68 | 16 | 80 | 1.12e-27 | 95.1 |
Msa0621380 | MtrunA17_Chr1g0155181 | 55.224 | 67 | 29 | 1 | 2 | 67 | 4 | 70 | 6.04e-26 | 90.9 |
Msa0621380 | MtrunA17_Chr6g0449111 | 57.576 | 66 | 27 | 1 | 2 | 66 | 7 | 72 | 2.73e-25 | 89.0 |
Msa0621380 | MtrunA17_Chr5g0404101 | 54.688 | 64 | 28 | 1 | 5 | 67 | 19 | 82 | 1.38e-24 | 87.8 |
Msa0621380 | MtrunA17_Chr3g0141601 | 55.072 | 69 | 30 | 1 | 2 | 69 | 4 | 72 | 6.39e-24 | 85.9 |
Msa0621380 | MtrunA17_Chr3g0081631 | 55.072 | 69 | 29 | 1 | 2 | 68 | 7 | 75 | 8.47e-23 | 83.2 |
Msa0621380 | MtrunA17_Chr7g0255841 | 59.016 | 61 | 24 | 1 | 8 | 67 | 15 | 75 | 3.53e-22 | 81.6 |
Msa0621380 | MtrunA17_Chr5g0429521 | 54.930 | 71 | 31 | 1 | 1 | 70 | 25 | 95 | 7.70e-21 | 82.8 |
Msa0621380 | MtrunA17_Chr3g0141641 | 55.385 | 65 | 28 | 1 | 4 | 67 | 2 | 66 | 6.53e-20 | 75.9 |
Msa0621380 | MtrunA17_Chr3g0104071 | 54.412 | 68 | 30 | 1 | 2 | 68 | 40 | 107 | 8.68e-20 | 80.1 |
Msa0621380 | MtrunA17_Chr7g0241761 | 51.429 | 70 | 33 | 1 | 2 | 70 | 32 | 101 | 7.15e-18 | 75.1 |
Msa0621380 | MtrunA17_Chr8g0365011 | 43.836 | 73 | 40 | 1 | 1 | 72 | 4 | 76 | 5.99e-17 | 72.4 |
Msa0621380 | MtrunA17_Chr5g0436501 | 50.769 | 65 | 31 | 1 | 3 | 66 | 25 | 89 | 5.16e-16 | 69.7 |
Msa0621380 | MtrunA17_Chr1g0194071 | 47.143 | 70 | 35 | 1 | 3 | 70 | 9 | 78 | 3.30e-15 | 63.9 |
Msa0621380 | MtrunA17_Chr7g0270711 | 50.820 | 61 | 28 | 1 | 3 | 61 | 9 | 69 | 1.29e-14 | 62.4 |
Msa0621380 | MtrunA17_Chr1g0162081 | 38.571 | 70 | 42 | 1 | 2 | 70 | 9 | 78 | 2.60e-14 | 65.1 |
Msa0621380 | MtrunA17_Chr8g0364741 | 37.500 | 72 | 44 | 1 | 2 | 72 | 7 | 78 | 1.87e-13 | 60.5 |
Msa0621380 | MtrunA17_Chr1g0210471 | 40.000 | 65 | 38 | 1 | 3 | 66 | 22 | 86 | 1.32e-11 | 57.4 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0621380 | AT4G39250.1 | 66.154 | 65 | 21 | 1 | 5 | 68 | 14 | 78 | 1.41e-28 | 98.2 |
Msa0621380 | AT1G75250.2 | 62.687 | 67 | 24 | 1 | 3 | 68 | 10 | 76 | 4.76e-27 | 94.4 |
Msa0621380 | AT1G75250.1 | 64.615 | 65 | 22 | 1 | 5 | 68 | 12 | 76 | 6.58e-27 | 94.7 |
Msa0621380 | AT2G21650.1 | 56.522 | 69 | 29 | 1 | 5 | 72 | 14 | 82 | 8.41e-26 | 91.3 |
Msa0621380 | AT1G19510.1 | 61.290 | 62 | 23 | 1 | 8 | 68 | 15 | 76 | 7.36e-24 | 86.3 |
Msa0621380 | AT2G18328.1 | 55.385 | 65 | 27 | 2 | 8 | 71 | 14 | 77 | 1.04e-18 | 72.8 |
Msa0621380 | AT2G38090.1 | 51.429 | 70 | 33 | 1 | 2 | 70 | 26 | 95 | 3.22e-18 | 76.3 |
Msa0621380 | AT5G58900.1 | 52.174 | 69 | 32 | 1 | 2 | 69 | 31 | 99 | 1.33e-17 | 74.3 |
Msa0621380 | AT4G36570.1 | 65.909 | 44 | 14 | 1 | 5 | 47 | 12 | 55 | 6.84e-16 | 65.1 |
Msa0621380 | AT5G05790.2 | 45.714 | 70 | 37 | 1 | 2 | 70 | 28 | 97 | 9.27e-16 | 69.3 |
Msa0621380 | AT5G05790.1 | 45.714 | 70 | 37 | 1 | 2 | 70 | 28 | 97 | 9.27e-16 | 69.3 |
Msa0621380 | AT3G11280.2 | 49.206 | 63 | 31 | 1 | 5 | 66 | 33 | 95 | 2.42e-15 | 68.2 |
Msa0621380 | AT3G11280.1 | 49.206 | 63 | 31 | 1 | 5 | 66 | 33 | 95 | 2.42e-15 | 68.2 |
Msa0621380 | AT5G08520.1 | 47.826 | 69 | 35 | 1 | 5 | 72 | 12 | 80 | 3.62e-14 | 65.1 |
Msa0621380 | AT5G04760.1 | 43.284 | 67 | 37 | 1 | 1 | 66 | 1 | 67 | 3.29e-13 | 61.6 |
Msa0621380 | AT5G01200.1 | 45.070 | 71 | 37 | 2 | 4 | 72 | 29 | 99 | 1.61e-12 | 60.5 |
Msa0621380 | AT1G49010.1 | 41.429 | 70 | 37 | 2 | 1 | 66 | 4 | 73 | 5.46e-12 | 59.3 |
Find 26 sgRNAs with CRISPR-Local
Find 214 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GCAACATTGTGCCATCTTTC+TGG | 0.106622 | 4_2:-73468853 | None:intergenic |
GTACAATGTAAGGAAATTAA+AGG | 0.280704 | 4_2:-73470588 | None:intergenic |
CAAGCTTAATTATTGTGTTC+TGG | 0.297492 | 4_2:-73470390 | None:intergenic |
AATGCATACTAGTGTATCTT+TGG | 0.359894 | 4_2:+73470452 | Msa0621380:three_prime_UTR |
ATTAAAGATACGTCAAATAC+TGG | 0.365763 | 4_2:-73470422 | None:intergenic |
ATAGAAAGAAATTAATATAT+AGG | 0.371156 | 4_2:-73470532 | None:intergenic |
TTCATTCATTCATCAACAAA+TGG | 0.409031 | 4_2:+73468762 | Msa0621380:exon |
TGTAACGAGGAAAAGGGATA+TGG | 0.417505 | 4_2:-73468957 | None:intergenic |
TACGTTGAACATCTTCTTTG+AGG | 0.435409 | 4_2:-73468924 | None:intergenic |
CAAACTGTTTGAACAAGCAT+TGG | 0.467435 | 4_2:+73468810 | Msa0621380:CDS |
TCATTATTGTAAGTTTATGA+AGG | 0.467482 | 4_2:+73470645 | Msa0621380:three_prime_UTR |
TACAATGTAAGGAAATTAAA+GGG | 0.482580 | 4_2:-73470587 | None:intergenic |
CACAATGTTGCCAAAGTGGT+TGG | 0.534351 | 4_2:+73468865 | Msa0621380:CDS |
ATCAACAAATGGCAACCTCA+TGG | 0.544947 | 4_2:+73468773 | Msa0621380:exon |
AAAACTAACACCAACTCCTA+AGG | 0.547909 | 4_2:+73468979 | Msa0621380:CDS |
AAGATACGTCAAATACTGGT+TGG | 0.552145 | 4_2:-73470418 | None:intergenic |
ATAGAGAAACTCCAGAAAGA+TGG | 0.558722 | 4_2:+73468842 | Msa0621380:CDS |
AGAAGAGTGCCACATTCACT+TGG | 0.560492 | 4_2:-73470507 | None:intergenic |
ATATATTATACCTTAGGAGT+TGG | 0.560505 | 4_2:-73468989 | None:intergenic |
TGTAAGGAAATTAAAGGGCG+AGG | 0.564312 | 4_2:-73470582 | None:intergenic |
AGTGCCACATTCACTTGGCA+AGG | 0.606187 | 4_2:-73470502 | None:intergenic |
ATGGCACAATGTTGCCAAAG+TGG | 0.642850 | 4_2:+73468861 | Msa0621380:CDS |
TGGCAACCTCATGGACTGCG+AGG | 0.652849 | 4_2:+73468782 | Msa0621380:CDS |
TGCACCTTGCCAAGTGAATG+TGG | 0.653689 | 4_2:+73470498 | Msa0621380:three_prime_UTR |
GTTCTGCCTCGCAGTCCATG+AGG | 0.665063 | 4_2:-73468788 | None:intergenic |
GATGTTCAACGTATTGAGCG+TGG | 0.669371 | 4_2:+73468934 | Msa0621380:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATATTGTTAAAAAAAGAATA+TGG | - | chr4_2:73468735-73468754 | None:intergenic | 10.0% |
!!! | TTAAATTATTATGTTTTTGA+GGG | + | chr4_2:73469049-73469068 | Msa0621380:intron | 10.0% |
!! | TAATATCTAATTAAATTTAG+GGG | - | chr4_2:73469110-73469129 | None:intergenic | 10.0% |
!!! | TATTATTTTTACAAACATAT+AGG | + | chr4_2:73469368-73469387 | Msa0621380:intron | 10.0% |
!!! | TTAATTGAGATTTTATATTA+TGG | - | chr4_2:73469651-73469670 | None:intergenic | 10.0% |
!!! | ATATGTTTAATTTTTTTCTT+AGG | + | chr4_2:73469832-73469851 | Msa0621380:intron | 10.0% |
!! | ATATTATATAGTTTATTCAA+TGG | - | chr4_2:73470005-73470024 | None:intergenic | 10.0% |
!! | AATAAACTATATAATATCAA+TGG | + | chr4_2:73470008-73470027 | Msa0621380:intron | 10.0% |
!!! | ATAATAAGTATTTGAAATTT+TGG | + | chr4_2:73470269-73470288 | Msa0621380:intron | 10.0% |
!!! | TAATAAGTATTTGAAATTTT+GGG | + | chr4_2:73470270-73470289 | Msa0621380:intron | 10.0% |
!! | ATAGAAAGAAATTAATATAT+AGG | - | chr4_2:73470535-73470554 | None:intergenic | 10.0% |
!! | ATATTGTTAAAAAAAGAATA+TGG | - | chr4_2:73468735-73468754 | None:intergenic | 10.0% |
!!! | TTAAATTATTATGTTTTTGA+GGG | + | chr4_2:73469049-73469068 | Msa0621380:intron | 10.0% |
!! | TAATATCTAATTAAATTTAG+GGG | - | chr4_2:73469110-73469129 | None:intergenic | 10.0% |
!!! | TATTATTTTTACAAACATAT+AGG | + | chr4_2:73469368-73469387 | Msa0621380:intron | 10.0% |
!!! | TTAATTGAGATTTTATATTA+TGG | - | chr4_2:73469651-73469670 | None:intergenic | 10.0% |
!!! | ATATGTTTAATTTTTTTCTT+AGG | + | chr4_2:73469832-73469851 | Msa0621380:intron | 10.0% |
!! | ATATTATATAGTTTATTCAA+TGG | - | chr4_2:73470005-73470024 | None:intergenic | 10.0% |
!! | AATAAACTATATAATATCAA+TGG | + | chr4_2:73470008-73470027 | Msa0621380:intron | 10.0% |
!!! | ATAATAAGTATTTGAAATTT+TGG | + | chr4_2:73470269-73470288 | Msa0621380:intron | 10.0% |
!!! | TAATAAGTATTTGAAATTTT+GGG | + | chr4_2:73470270-73470289 | Msa0621380:intron | 10.0% |
!! | ATAGAAAGAAATTAATATAT+AGG | - | chr4_2:73470535-73470554 | None:intergenic | 10.0% |
!! | AACATAATAATTTAAGAACA+TGG | - | chr4_2:73469044-73469063 | None:intergenic | 15.0% |
!!! | CTTAAATTATTATGTTTTTG+AGG | + | chr4_2:73469048-73469067 | Msa0621380:intron | 15.0% |
!!! | TTTTAGTTAAACATAGTTTA+GGG | - | chr4_2:73469165-73469184 | None:intergenic | 15.0% |
!!! | ATTTTAGTTAAACATAGTTT+AGG | - | chr4_2:73469166-73469185 | None:intergenic | 15.0% |
!!! | ATGTTCAAAAATTATTGATT+TGG | + | chr4_2:73469941-73469960 | Msa0621380:intron | 15.0% |
!!! | TTATAAAGTTTTTTTTGAAG+AGG | - | chr4_2:73470188-73470207 | None:intergenic | 15.0% |
!! | AACATAATAATTTAAGAACA+TGG | - | chr4_2:73469044-73469063 | None:intergenic | 15.0% |
!!! | CTTAAATTATTATGTTTTTG+AGG | + | chr4_2:73469048-73469067 | Msa0621380:intron | 15.0% |
!!! | TTTTAGTTAAACATAGTTTA+GGG | - | chr4_2:73469165-73469184 | None:intergenic | 15.0% |
!!! | ATTTTAGTTAAACATAGTTT+AGG | - | chr4_2:73469166-73469185 | None:intergenic | 15.0% |
!!! | ATGTTCAAAAATTATTGATT+TGG | + | chr4_2:73469941-73469960 | Msa0621380:intron | 15.0% |
!!! | TTATAAAGTTTTTTTTGAAG+AGG | - | chr4_2:73470188-73470207 | None:intergenic | 15.0% |
!! | TGTTAAAAAAAGAATATGGT+TGG | - | chr4_2:73468731-73468750 | None:intergenic | 20.0% |
!! | TTTAGTTAAACATAGTTTAG+GGG | - | chr4_2:73469164-73469183 | None:intergenic | 20.0% |
!!! | TTAAATTAGCCTACTTAAAT+TGG | - | chr4_2:73469284-73469303 | None:intergenic | 20.0% |
!! | TTAAATTTCGTTGTATATGT+TGG | + | chr4_2:73469557-73469576 | Msa0621380:intron | 20.0% |
!! | TTTCGTATAAAATTGATGAA+AGG | - | chr4_2:73470211-73470230 | None:intergenic | 20.0% |
!! | TACAATGTAAGGAAATTAAA+GGG | - | chr4_2:73470590-73470609 | None:intergenic | 20.0% |
!!! | TTTATTTTTGGTACAATGTA+AGG | - | chr4_2:73470601-73470620 | None:intergenic | 20.0% |
!! | TCATTATTGTAAGTTTATGA+AGG | + | chr4_2:73470645-73470664 | Msa0621380:three_prime_UTR | 20.0% |
!! | TGTTAAAAAAAGAATATGGT+TGG | - | chr4_2:73468731-73468750 | None:intergenic | 20.0% |
!! | TTTAGTTAAACATAGTTTAG+GGG | - | chr4_2:73469164-73469183 | None:intergenic | 20.0% |
!!! | TTAAATTAGCCTACTTAAAT+TGG | - | chr4_2:73469284-73469303 | None:intergenic | 20.0% |
!! | TTAAATTTCGTTGTATATGT+TGG | + | chr4_2:73469557-73469576 | Msa0621380:intron | 20.0% |
!! | TTTCGTATAAAATTGATGAA+AGG | - | chr4_2:73470211-73470230 | None:intergenic | 20.0% |
!! | TACAATGTAAGGAAATTAAA+GGG | - | chr4_2:73470590-73470609 | None:intergenic | 20.0% |
!!! | TTTATTTTTGGTACAATGTA+AGG | - | chr4_2:73470601-73470620 | None:intergenic | 20.0% |
!! | TCATTATTGTAAGTTTATGA+AGG | + | chr4_2:73470645-73470664 | Msa0621380:three_prime_UTR | 20.0% |
! | TTCATTCATTCATCAACAAA+TGG | + | chr4_2:73468762-73468781 | Msa0621380:exon | 25.0% |
! | ATATATTATACCTTAGGAGT+TGG | - | chr4_2:73468992-73469011 | None:intergenic | 25.0% |
! | CAGTACATATATTATACCTT+AGG | - | chr4_2:73468998-73469017 | None:intergenic | 25.0% |
! | TGGTAAGTGTGTAATATATT+AGG | - | chr4_2:73469136-73469155 | None:intergenic | 25.0% |
! | ATACAACGAAATTTAAGTAG+TGG | - | chr4_2:73469553-73469572 | None:intergenic | 25.0% |
! | ATTCCTCTCTCATAATATTA+AGG | + | chr4_2:73469621-73469640 | Msa0621380:intron | 25.0% |
! | AAACCTTAATATTATGAGAG+AGG | - | chr4_2:73469627-73469646 | None:intergenic | 25.0% |
! | AATTCTTATCCCATTCAATA+TGG | - | chr4_2:73469724-73469743 | None:intergenic | 25.0% |
! | TATTGAATGGGATAAGAATT+TGG | + | chr4_2:73469724-73469743 | Msa0621380:intron | 25.0% |
! | ATTGAATGGGATAAGAATTT+GGG | + | chr4_2:73469725-73469744 | Msa0621380:intron | 25.0% |
!!! | CAGTTATTAGTTTTTATACG+TGG | + | chr4_2:73469776-73469795 | Msa0621380:intron | 25.0% |
! | ATTAAAGATACGTCAAATAC+TGG | - | chr4_2:73470425-73470444 | None:intergenic | 25.0% |
! | GTACAATGTAAGGAAATTAA+AGG | - | chr4_2:73470591-73470610 | None:intergenic | 25.0% |
! | TTCATTCATTCATCAACAAA+TGG | + | chr4_2:73468762-73468781 | Msa0621380:exon | 25.0% |
! | ATATATTATACCTTAGGAGT+TGG | - | chr4_2:73468992-73469011 | None:intergenic | 25.0% |
! | CAGTACATATATTATACCTT+AGG | - | chr4_2:73468998-73469017 | None:intergenic | 25.0% |
! | TGGTAAGTGTGTAATATATT+AGG | - | chr4_2:73469136-73469155 | None:intergenic | 25.0% |
! | ATACAACGAAATTTAAGTAG+TGG | - | chr4_2:73469553-73469572 | None:intergenic | 25.0% |
! | ATTCCTCTCTCATAATATTA+AGG | + | chr4_2:73469621-73469640 | Msa0621380:intron | 25.0% |
! | AAACCTTAATATTATGAGAG+AGG | - | chr4_2:73469627-73469646 | None:intergenic | 25.0% |
! | AATTCTTATCCCATTCAATA+TGG | - | chr4_2:73469724-73469743 | None:intergenic | 25.0% |
! | TATTGAATGGGATAAGAATT+TGG | + | chr4_2:73469724-73469743 | Msa0621380:intron | 25.0% |
! | ATTGAATGGGATAAGAATTT+GGG | + | chr4_2:73469725-73469744 | Msa0621380:intron | 25.0% |
!!! | CAGTTATTAGTTTTTATACG+TGG | + | chr4_2:73469776-73469795 | Msa0621380:intron | 25.0% |
! | ATTAAAGATACGTCAAATAC+TGG | - | chr4_2:73470425-73470444 | None:intergenic | 25.0% |
! | GTACAATGTAAGGAAATTAA+AGG | - | chr4_2:73470591-73470610 | None:intergenic | 25.0% |
!!! | TAGTTTTGTAACGAGGAAAA+GGG | - | chr4_2:73468966-73468985 | None:intergenic | 30.0% |
!!! | TTAGTTTTGTAACGAGGAAA+AGG | - | chr4_2:73468967-73468986 | None:intergenic | 30.0% |
ATTTAGAAACTAAACCCACT+TGG | + | chr4_2:73469184-73469203 | Msa0621380:intron | 30.0% | |
TCTCTAGTACCAATTTAAGT+AGG | + | chr4_2:73469272-73469291 | Msa0621380:intron | 30.0% | |
TGCTTATTCTGCACAATTTA+GGG | - | chr4_2:73469396-73469415 | None:intergenic | 30.0% | |
TTGCTTATTCTGCACAATTT+AGG | - | chr4_2:73469397-73469416 | None:intergenic | 30.0% | |
AATTTCTCTCCCTATTACTT+TGG | + | chr4_2:73469519-73469538 | Msa0621380:intron | 30.0% | |
GCGTAAAAACCAAAGTAATA+GGG | - | chr4_2:73469531-73469550 | None:intergenic | 30.0% | |
TCAAGAAATTGTCTCAACAA+AGG | + | chr4_2:73469584-73469603 | Msa0621380:intron | 30.0% | |
CAAGAAATTGTCTCAACAAA+GGG | + | chr4_2:73469585-73469604 | Msa0621380:intron | 30.0% | |
!! | AATAACTGTCGCACTTTTTA+GGG | - | chr4_2:73469764-73469783 | None:intergenic | 30.0% |
!! | TAATAACTGTCGCACTTTTT+AGG | - | chr4_2:73469765-73469784 | None:intergenic | 30.0% |
TAAGTCATTGTTTAAGTGCA+TGG | - | chr4_2:73469888-73469907 | None:intergenic | 30.0% | |
! | AACAATGACTTATGACTTGT+CGG | + | chr4_2:73469896-73469915 | Msa0621380:intron | 30.0% |
!! | ATAACAGAGGTATTCTTGTA+TGG | - | chr4_2:73469975-73469994 | None:intergenic | 30.0% |
CAATGGACAATATATAACAG+AGG | - | chr4_2:73469988-73470007 | None:intergenic | 30.0% | |
TTGAAGTTTGAATTCCAAAG+AGG | + | chr4_2:73470065-73470084 | Msa0621380:intron | 30.0% | |
!!! | GATTCACTTTTTTTCCTCTT+TGG | - | chr4_2:73470082-73470101 | None:intergenic | 30.0% |
!!! | GTTTTTTTTGAAGAGGAGAA+AGG | - | chr4_2:73470181-73470200 | None:intergenic | 30.0% |
CAAGCTTAATTATTGTGTTC+TGG | - | chr4_2:73470393-73470412 | None:intergenic | 30.0% | |
AATGCATACTAGTGTATCTT+TGG | + | chr4_2:73470452-73470471 | Msa0621380:three_prime_UTR | 30.0% | |
!!! | TAGTTTTGTAACGAGGAAAA+GGG | - | chr4_2:73468966-73468985 | None:intergenic | 30.0% |
!!! | TTAGTTTTGTAACGAGGAAA+AGG | - | chr4_2:73468967-73468986 | None:intergenic | 30.0% |
ATTTAGAAACTAAACCCACT+TGG | + | chr4_2:73469184-73469203 | Msa0621380:intron | 30.0% | |
TCTCTAGTACCAATTTAAGT+AGG | + | chr4_2:73469272-73469291 | Msa0621380:intron | 30.0% | |
TGCTTATTCTGCACAATTTA+GGG | - | chr4_2:73469396-73469415 | None:intergenic | 30.0% | |
TTGCTTATTCTGCACAATTT+AGG | - | chr4_2:73469397-73469416 | None:intergenic | 30.0% | |
AATTTCTCTCCCTATTACTT+TGG | + | chr4_2:73469519-73469538 | Msa0621380:intron | 30.0% | |
GCGTAAAAACCAAAGTAATA+GGG | - | chr4_2:73469531-73469550 | None:intergenic | 30.0% | |
TCAAGAAATTGTCTCAACAA+AGG | + | chr4_2:73469584-73469603 | Msa0621380:intron | 30.0% | |
CAAGAAATTGTCTCAACAAA+GGG | + | chr4_2:73469585-73469604 | Msa0621380:intron | 30.0% | |
!! | AATAACTGTCGCACTTTTTA+GGG | - | chr4_2:73469764-73469783 | None:intergenic | 30.0% |
!! | TAATAACTGTCGCACTTTTT+AGG | - | chr4_2:73469765-73469784 | None:intergenic | 30.0% |
TAAGTCATTGTTTAAGTGCA+TGG | - | chr4_2:73469888-73469907 | None:intergenic | 30.0% | |
! | AACAATGACTTATGACTTGT+CGG | + | chr4_2:73469896-73469915 | Msa0621380:intron | 30.0% |
!! | ATAACAGAGGTATTCTTGTA+TGG | - | chr4_2:73469975-73469994 | None:intergenic | 30.0% |
CAATGGACAATATATAACAG+AGG | - | chr4_2:73469988-73470007 | None:intergenic | 30.0% | |
TTGAAGTTTGAATTCCAAAG+AGG | + | chr4_2:73470065-73470084 | Msa0621380:intron | 30.0% | |
!!! | GATTCACTTTTTTTCCTCTT+TGG | - | chr4_2:73470082-73470101 | None:intergenic | 30.0% |
!!! | GTTTTTTTTGAAGAGGAGAA+AGG | - | chr4_2:73470181-73470200 | None:intergenic | 30.0% |
CAAGCTTAATTATTGTGTTC+TGG | - | chr4_2:73470393-73470412 | None:intergenic | 30.0% | |
AATGCATACTAGTGTATCTT+TGG | + | chr4_2:73470452-73470471 | Msa0621380:three_prime_UTR | 30.0% | |
CAAACTGTTTGAACAAGCAT+TGG | + | chr4_2:73468810-73468829 | Msa0621380:CDS | 35.0% | |
ATAGAGAAACTCCAGAAAGA+TGG | + | chr4_2:73468842-73468861 | Msa0621380:CDS | 35.0% | |
!! | AACTGATTTTCCAACCACTT+TGG | - | chr4_2:73468878-73468897 | None:intergenic | 35.0% |
TACGTTGAACATCTTCTTTG+AGG | - | chr4_2:73468927-73468946 | None:intergenic | 35.0% | |
!!! | TTGGTGTTAGTTTTGTAACG+AGG | - | chr4_2:73468973-73468992 | None:intergenic | 35.0% |
AAAACTAACACCAACTCCTA+AGG | + | chr4_2:73468979-73468998 | Msa0621380:CDS | 35.0% | |
!! | TTTTGAGGGAAGTCTAAAAG+AGG | + | chr4_2:73469063-73469082 | Msa0621380:intron | 35.0% |
CTAAAAGAGGCTATACTCTT+TGG | + | chr4_2:73469076-73469095 | Msa0621380:intron | 35.0% | |
AACATAGTTTAGGGGCTTTA+TGG | - | chr4_2:73469156-73469175 | None:intergenic | 35.0% | |
TCCTAAAAGTCAATACCACT+AGG | - | chr4_2:73469215-73469234 | None:intergenic | 35.0% | |
GGCGTAAAAACCAAAGTAAT+AGG | - | chr4_2:73469532-73469551 | None:intergenic | 35.0% | |
GCACAAGTACTTTAAGTACA+CGG | - | chr4_2:73469691-73469710 | None:intergenic | 35.0% | |
! | CTTAAAGTACTTGTGCTATG+CGG | + | chr4_2:73469695-73469714 | Msa0621380:intron | 35.0% |
! | TTAAAGTACTTGTGCTATGC+GGG | + | chr4_2:73469696-73469715 | Msa0621380:intron | 35.0% |
AAGATACGTCAAATACTGGT+TGG | - | chr4_2:73470421-73470440 | None:intergenic | 35.0% | |
CAAACTGTTTGAACAAGCAT+TGG | + | chr4_2:73468810-73468829 | Msa0621380:CDS | 35.0% | |
ATAGAGAAACTCCAGAAAGA+TGG | + | chr4_2:73468842-73468861 | Msa0621380:CDS | 35.0% | |
!! | AACTGATTTTCCAACCACTT+TGG | - | chr4_2:73468878-73468897 | None:intergenic | 35.0% |
TACGTTGAACATCTTCTTTG+AGG | - | chr4_2:73468927-73468946 | None:intergenic | 35.0% | |
!!! | TTGGTGTTAGTTTTGTAACG+AGG | - | chr4_2:73468973-73468992 | None:intergenic | 35.0% |
AAAACTAACACCAACTCCTA+AGG | + | chr4_2:73468979-73468998 | Msa0621380:CDS | 35.0% | |
!! | TTTTGAGGGAAGTCTAAAAG+AGG | + | chr4_2:73469063-73469082 | Msa0621380:intron | 35.0% |
CTAAAAGAGGCTATACTCTT+TGG | + | chr4_2:73469076-73469095 | Msa0621380:intron | 35.0% | |
AACATAGTTTAGGGGCTTTA+TGG | - | chr4_2:73469156-73469175 | None:intergenic | 35.0% | |
TCCTAAAAGTCAATACCACT+AGG | - | chr4_2:73469215-73469234 | None:intergenic | 35.0% | |
GGCGTAAAAACCAAAGTAAT+AGG | - | chr4_2:73469532-73469551 | None:intergenic | 35.0% | |
GCACAAGTACTTTAAGTACA+CGG | - | chr4_2:73469691-73469710 | None:intergenic | 35.0% | |
! | CTTAAAGTACTTGTGCTATG+CGG | + | chr4_2:73469695-73469714 | Msa0621380:intron | 35.0% |
! | TTAAAGTACTTGTGCTATGC+GGG | + | chr4_2:73469696-73469715 | Msa0621380:intron | 35.0% |
AAGATACGTCAAATACTGGT+TGG | - | chr4_2:73470421-73470440 | None:intergenic | 35.0% | |
ATCAACAAATGGCAACCTCA+TGG | + | chr4_2:73468773-73468792 | Msa0621380:exon | 40.0% | |
TGTAACGAGGAAAAGGGATA+TGG | - | chr4_2:73468960-73468979 | None:intergenic | 40.0% | |
GAAACTAAACCCACTTGGAT+TGG | + | chr4_2:73469189-73469208 | Msa0621380:intron | 40.0% | |
!!! | GCCTAGTGGTATTGACTTTT+AGG | + | chr4_2:73469211-73469230 | Msa0621380:intron | 40.0% |
GAATTGAACCTGAGATCTCA+AGG | - | chr4_2:73469249-73469268 | None:intergenic | 40.0% | |
! | TAAAGTACTTGTGCTATGCG+GGG | + | chr4_2:73469697-73469716 | Msa0621380:intron | 40.0% |
GTGCATGGACATATTGTAGT+TGG | - | chr4_2:73469873-73469892 | None:intergenic | 40.0% | |
TTGTTTGAACCAGCAAGCTT+GGG | - | chr4_2:73470035-73470054 | None:intergenic | 40.0% | |
TTTGTTTGAACCAGCAAGCT+TGG | - | chr4_2:73470036-73470055 | None:intergenic | 40.0% | |
! | TCTTTTCCGATATACTTCGC+AGG | + | chr4_2:73470352-73470371 | Msa0621380:intron | 40.0% |
CAAGAACCTGCGAAGTATAT+CGG | - | chr4_2:73470361-73470380 | None:intergenic | 40.0% | |
TGTAAGGAAATTAAAGGGCG+AGG | - | chr4_2:73470585-73470604 | None:intergenic | 40.0% | |
ATCAACAAATGGCAACCTCA+TGG | + | chr4_2:73468773-73468792 | Msa0621380:exon | 40.0% | |
TGTAACGAGGAAAAGGGATA+TGG | - | chr4_2:73468960-73468979 | None:intergenic | 40.0% | |
GAAACTAAACCCACTTGGAT+TGG | + | chr4_2:73469189-73469208 | Msa0621380:intron | 40.0% | |
!!! | GCCTAGTGGTATTGACTTTT+AGG | + | chr4_2:73469211-73469230 | Msa0621380:intron | 40.0% |
GAATTGAACCTGAGATCTCA+AGG | - | chr4_2:73469249-73469268 | None:intergenic | 40.0% | |
! | TAAAGTACTTGTGCTATGCG+GGG | + | chr4_2:73469697-73469716 | Msa0621380:intron | 40.0% |
GTGCATGGACATATTGTAGT+TGG | - | chr4_2:73469873-73469892 | None:intergenic | 40.0% | |
TTGTTTGAACCAGCAAGCTT+GGG | - | chr4_2:73470035-73470054 | None:intergenic | 40.0% | |
TTTGTTTGAACCAGCAAGCT+TGG | - | chr4_2:73470036-73470055 | None:intergenic | 40.0% | |
! | TCTTTTCCGATATACTTCGC+AGG | + | chr4_2:73470352-73470371 | Msa0621380:intron | 40.0% |
CAAGAACCTGCGAAGTATAT+CGG | - | chr4_2:73470361-73470380 | None:intergenic | 40.0% | |
TGTAAGGAAATTAAAGGGCG+AGG | - | chr4_2:73470585-73470604 | None:intergenic | 40.0% | |
GCAACATTGTGCCATCTTTC+TGG | - | chr4_2:73468856-73468875 | None:intergenic | 45.0% | |
ATGGCACAATGTTGCCAAAG+TGG | + | chr4_2:73468861-73468880 | Msa0621380:CDS | 45.0% | |
CACAATGTTGCCAAAGTGGT+TGG | + | chr4_2:73468865-73468884 | Msa0621380:CDS | 45.0% | |
GATGTTCAACGTATTGAGCG+TGG | + | chr4_2:73468934-73468953 | Msa0621380:CDS | 45.0% | |
GAGATCTCAAGGAAACTCTC+AGG | - | chr4_2:73469238-73469257 | None:intergenic | 45.0% | |
GAGAGTTTCCTTGAGATCTC+AGG | + | chr4_2:73469238-73469257 | Msa0621380:intron | 45.0% | |
TATGCGGGGTCCATATTGAA+TGG | + | chr4_2:73469711-73469730 | Msa0621380:intron | 45.0% | |
ATGCGGGGTCCATATTGAAT+GGG | + | chr4_2:73469712-73469731 | Msa0621380:intron | 45.0% | |
TGTTTGAACCAGCAAGCTTG+GGG | - | chr4_2:73470034-73470053 | None:intergenic | 45.0% | |
!! | AGAAGAGTGCCACATTCACT+TGG | - | chr4_2:73470510-73470529 | None:intergenic | 45.0% |
GCAACATTGTGCCATCTTTC+TGG | - | chr4_2:73468856-73468875 | None:intergenic | 45.0% | |
ATGGCACAATGTTGCCAAAG+TGG | + | chr4_2:73468861-73468880 | Msa0621380:CDS | 45.0% | |
CACAATGTTGCCAAAGTGGT+TGG | + | chr4_2:73468865-73468884 | Msa0621380:CDS | 45.0% | |
GATGTTCAACGTATTGAGCG+TGG | + | chr4_2:73468934-73468953 | Msa0621380:CDS | 45.0% | |
GAGATCTCAAGGAAACTCTC+AGG | - | chr4_2:73469238-73469257 | None:intergenic | 45.0% | |
GAGAGTTTCCTTGAGATCTC+AGG | + | chr4_2:73469238-73469257 | Msa0621380:intron | 45.0% | |
TATGCGGGGTCCATATTGAA+TGG | + | chr4_2:73469711-73469730 | Msa0621380:intron | 45.0% | |
ATGCGGGGTCCATATTGAAT+GGG | + | chr4_2:73469712-73469731 | Msa0621380:intron | 45.0% | |
TGTTTGAACCAGCAAGCTTG+GGG | - | chr4_2:73470034-73470053 | None:intergenic | 45.0% | |
!! | AGAAGAGTGCCACATTCACT+TGG | - | chr4_2:73470510-73470529 | None:intergenic | 45.0% |
!! | TTAATATCTAATTAAATTTA+GGG | - | chr4_2:73469111-73469130 | None:intergenic | 5.0% |
!! | TTTAATATCTAATTAAATTT+AGG | - | chr4_2:73469112-73469131 | None:intergenic | 5.0% |
!!! | TAAATACAATATTTTATTTT+TGG | - | chr4_2:73470613-73470632 | None:intergenic | 5.0% |
!! | TTAATATCTAATTAAATTTA+GGG | - | chr4_2:73469111-73469130 | None:intergenic | 5.0% |
!! | TTTAATATCTAATTAAATTT+AGG | - | chr4_2:73469112-73469131 | None:intergenic | 5.0% |
!!! | TAAATACAATATTTTATTTT+TGG | - | chr4_2:73470613-73470632 | None:intergenic | 5.0% |
ACCACTAGGCCAATCCAAGT+GGG | - | chr4_2:73469201-73469220 | None:intergenic | 50.0% | |
TACCACTAGGCCAATCCAAG+TGG | - | chr4_2:73469202-73469221 | None:intergenic | 50.0% | |
TGCACCTTGCCAAGTGAATG+TGG | + | chr4_2:73470498-73470517 | Msa0621380:three_prime_UTR | 50.0% | |
AGTGCCACATTCACTTGGCA+AGG | - | chr4_2:73470505-73470524 | None:intergenic | 50.0% | |
ACCACTAGGCCAATCCAAGT+GGG | - | chr4_2:73469201-73469220 | None:intergenic | 50.0% | |
TACCACTAGGCCAATCCAAG+TGG | - | chr4_2:73469202-73469221 | None:intergenic | 50.0% | |
TGCACCTTGCCAAGTGAATG+TGG | + | chr4_2:73470498-73470517 | Msa0621380:three_prime_UTR | 50.0% | |
AGTGCCACATTCACTTGGCA+AGG | - | chr4_2:73470505-73470524 | None:intergenic | 50.0% | |
!! | ACCCACTTGGATTGGCCTAG+TGG | + | chr4_2:73469197-73469216 | Msa0621380:intron | 55.0% |
ATCAATGGCCCCAAGCTTGC+TGG | + | chr4_2:73470023-73470042 | Msa0621380:intron | 55.0% | |
!! | ACCCACTTGGATTGGCCTAG+TGG | + | chr4_2:73469197-73469216 | Msa0621380:intron | 55.0% |
ATCAATGGCCCCAAGCTTGC+TGG | + | chr4_2:73470023-73470042 | Msa0621380:intron | 55.0% | |
! | TGGCAACCTCATGGACTGCG+AGG | + | chr4_2:73468782-73468801 | Msa0621380:CDS | 60.0% |
GTTCTGCCTCGCAGTCCATG+AGG | - | chr4_2:73468791-73468810 | None:intergenic | 60.0% | |
! | TGGCAACCTCATGGACTGCG+AGG | + | chr4_2:73468782-73468801 | Msa0621380:CDS | 60.0% |
GTTCTGCCTCGCAGTCCATG+AGG | - | chr4_2:73468791-73468810 | None:intergenic | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4_2 | gene | 73468717 | 73470716 | 73468717 | ID=Msa0621380;Name=Msa0621380 |
chr4_2 | mRNA | 73468717 | 73470716 | 73468717 | ID=Msa0621380-mRNA-1;Parent=Msa0621380;Name=Msa0621380-mRNA-1;_AED=0.35;_eAED=0.35;_QI=64|0|0.5|1|0|0.5|2|343|72 |
chr4_2 | exon | 73468717 | 73468999 | 73468717 | ID=Msa0621380-mRNA-1:exon:22066;Parent=Msa0621380-mRNA-1 |
chr4_2 | exon | 73470374 | 73470716 | 73470374 | ID=Msa0621380-mRNA-1:exon:22067;Parent=Msa0621380-mRNA-1 |
chr4_2 | five_prime_UTR | 73468717 | 73468780 | 73468717 | ID=Msa0621380-mRNA-1:five_prime_utr;Parent=Msa0621380-mRNA-1 |
chr4_2 | CDS | 73468781 | 73468999 | 73468781 | ID=Msa0621380-mRNA-1:cds;Parent=Msa0621380-mRNA-1 |
chr4_2 | three_prime_UTR | 73470374 | 73470716 | 73470374 | ID=Msa0621380-mRNA-1:three_prime_utr;Parent=Msa0621380-mRNA-1 |
Gene Sequence |
Protein sequence |