Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1255120 | XP_003629427.1 | 98.611 | 72 | 1 | 0 | 1 | 72 | 1 | 72 | 1.16e-45 | 150 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1255120 | sp|F4JVB8|RADL1_ARATH | 66.154 | 65 | 21 | 1 | 5 | 68 | 14 | 78 | 1.39e-27 | 98.2 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1255120 | G7LDY8 | 98.611 | 72 | 1 | 0 | 1 | 72 | 1 | 72 | 5.52e-46 | 150 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000220 | Msa1255120 | 0.842546 | 2.420323e-58 | -8.615850e-47 |
| Msa0001460 | Msa1255120 | 0.828195 | 1.028888e-54 | -8.615850e-47 |
| Msa0015370 | Msa1255120 | 0.815077 | 1.111774e-51 | -8.615850e-47 |
| Msa0026770 | Msa1255120 | 0.803298 | 3.725966e-49 | -8.615850e-47 |
| Msa0030400 | Msa1255120 | 0.807259 | 5.515062e-50 | -8.615850e-47 |
| Msa0034320 | Msa1255120 | 0.805640 | 1.210720e-49 | -8.615850e-47 |
| Msa0049990 | Msa1255120 | 0.813474 | 2.513362e-51 | -8.615850e-47 |
| Msa0054760 | Msa1255120 | 0.811292 | 7.530609e-51 | -8.615850e-47 |
| Msa0062750 | Msa1255120 | 0.808124 | 3.613482e-50 | -8.615850e-47 |
| Msa0072710 | Msa1255120 | 0.810739 | 9.924282e-51 | -8.615850e-47 |
| Msa0072910 | Msa1255120 | 0.813738 | 2.198674e-51 | -8.615850e-47 |
| Msa0094670 | Msa1255120 | 0.810404 | 1.172587e-50 | -8.615850e-47 |
| Msa0101150 | Msa1255120 | 0.823077 | 1.681638e-53 | -8.615850e-47 |
| Msa0101210 | Msa1255120 | 0.824667 | 7.130128e-54 | -8.615850e-47 |
| Msa0604700 | Msa1255120 | 0.805271 | 1.446570e-49 | -8.615850e-47 |
| Msa0606140 | Msa1255120 | 0.811456 | 6.939694e-51 | -8.615850e-47 |
| Msa0607300 | Msa1255120 | 0.825903 | 3.636245e-54 | -8.615850e-47 |
| Msa0607440 | Msa1255120 | 0.829682 | 4.490236e-55 | -8.615850e-47 |
| Msa0621380 | Msa1255120 | 0.970261 | 2.388997e-131 | -8.615850e-47 |
| Msa0621390 | Msa1255120 | 0.916961 | 9.477532e-86 | -8.615850e-47 |
| Msa0621410 | Msa1255120 | 0.858124 | 1.022008e-62 | -8.615850e-47 |
| Msa0629500 | Msa1255120 | 0.808775 | 2.624100e-50 | -8.615850e-47 |
| Msa0635130 | Msa1255120 | 0.805190 | 1.504289e-49 | -8.615850e-47 |
| Msa0635350 | Msa1255120 | 0.807245 | 5.553671e-50 | -8.615850e-47 |
| Msa0643800 | Msa1255120 | 0.804699 | 1.905604e-49 | -8.615850e-47 |
| Msa0645820 | Msa1255120 | 0.801715 | 7.900112e-49 | -8.615850e-47 |
| Msa0650360 | Msa1255120 | 0.825498 | 4.535722e-54 | -8.615850e-47 |
| Msa0657820 | Msa1255120 | 0.807600 | 4.670175e-50 | -8.615850e-47 |
| Msa0672350 | Msa1255120 | 0.805857 | 1.089947e-49 | -8.615850e-47 |
| Msa0683650 | Msa1255120 | 0.826136 | 3.200500e-54 | -8.615850e-47 |
| Msa0687540 | Msa1255120 | 0.818076 | 2.367662e-52 | -8.615850e-47 |
| Msa0687620 | Msa1255120 | 0.814583 | 1.431153e-51 | -8.615850e-47 |
| Msa0688760 | Msa1255120 | 0.838030 | 3.662684e-57 | -8.615850e-47 |
| Msa0690350 | Msa1255120 | 0.816145 | 6.432232e-52 | -8.615850e-47 |
| Msa0692910 | Msa1255120 | 0.800728 | 1.257878e-48 | -8.615850e-47 |
| Msa0707780 | Msa1255120 | 0.811524 | 6.705650e-51 | -8.615850e-47 |
| Msa0710950 | Msa1255120 | 0.809413 | 1.915834e-50 | -8.615850e-47 |
| Msa0712440 | Msa1255120 | 0.802193 | 6.301029e-49 | -8.615850e-47 |
| Msa0719340 | Msa1255120 | 0.810496 | 1.119702e-50 | -8.615850e-47 |
| Msa0720850 | Msa1255120 | 0.804065 | 2.583400e-49 | -8.615850e-47 |
| Msa0730180 | Msa1255120 | 0.829969 | 3.823216e-55 | -8.615850e-47 |
| Msa0753530 | Msa1255120 | 0.818650 | 1.754732e-52 | -8.615850e-47 |
| Msa0756480 | Msa1255120 | 0.819503 | 1.122185e-52 | -8.615850e-47 |
| Msa0757990 | Msa1255120 | -0.811953 | 5.409164e-51 | -8.615850e-47 |
| Msa0761930 | Msa1255120 | 0.825198 | 5.341344e-54 | -8.615850e-47 |
| Msa0766540 | Msa1255120 | 0.817134 | 3.859352e-52 | -8.615850e-47 |
| Msa0770430 | Msa1255120 | 0.818879 | 1.556800e-52 | -8.615850e-47 |
| Msa0772150 | Msa1255120 | 0.811927 | 5.480071e-51 | -8.615850e-47 |
| Msa0808420 | Msa1255120 | 0.836116 | 1.130073e-56 | -8.615850e-47 |
| Msa0829570 | Msa1255120 | 0.814188 | 1.749969e-51 | -8.615850e-47 |
| Msa0830120 | Msa1255120 | 0.802098 | 6.592364e-49 | -8.615850e-47 |
| Msa0830450 | Msa1255120 | 0.803059 | 4.177077e-49 | -8.615850e-47 |
| Msa0835510 | Msa1255120 | 0.819727 | 9.978227e-53 | -8.615850e-47 |
| Msa0836200 | Msa1255120 | 0.813395 | 2.615751e-51 | -8.615850e-47 |
| Msa0839730 | Msa1255120 | 0.819951 | 8.869069e-53 | -8.615850e-47 |
| Msa0840630 | Msa1255120 | 0.806999 | 6.262022e-50 | -8.615850e-47 |
| Msa0131390 | Msa1255120 | 0.833187 | 6.159196e-56 | -8.615850e-47 |
| Msa0139050 | Msa1255120 | 0.818017 | 2.440491e-52 | -8.615850e-47 |
| Msa0144340 | Msa1255120 | 0.800778 | 1.228360e-48 | -8.615850e-47 |
| Msa0147990 | Msa1255120 | 0.818807 | 1.616905e-52 | -8.615850e-47 |
| Msa0153640 | Msa1255120 | 0.810832 | 9.472915e-51 | -8.615850e-47 |
| Msa0159200 | Msa1255120 | 0.802982 | 4.331602e-49 | -8.615850e-47 |
| Msa0162030 | Msa1255120 | 0.804589 | 2.009045e-49 | -8.615850e-47 |
| Msa0162070 | Msa1255120 | 0.810250 | 1.265804e-50 | -8.615850e-47 |
| Msa0166980 | Msa1255120 | 0.800878 | 1.172094e-48 | -8.615850e-47 |
| Msa0173610 | Msa1255120 | 0.811058 | 8.464357e-51 | -8.615850e-47 |
| Msa0173850 | Msa1255120 | 0.803652 | 3.147042e-49 | -8.615850e-47 |
| Msa0176710 | Msa1255120 | 0.801776 | 7.677312e-49 | -8.615850e-47 |
| Msa0177490 | Msa1255120 | 0.835183 | 1.946623e-56 | -8.615850e-47 |
| Msa0181020 | Msa1255120 | 0.806441 | 8.212049e-50 | -8.615850e-47 |
| Msa0185550 | Msa1255120 | 0.813945 | 1.979720e-51 | -8.615850e-47 |
| Msa0203330 | Msa1255120 | 0.801861 | 7.372439e-49 | -8.615850e-47 |
| Msa0206600 | Msa1255120 | 0.812595 | 3.916676e-51 | -8.615850e-47 |
| Msa0206940 | Msa1255120 | 0.809203 | 2.124674e-50 | -8.615850e-47 |
| Msa0217470 | Msa1255120 | 0.819798 | 9.609494e-53 | -8.615850e-47 |
| Msa0224960 | Msa1255120 | 0.800275 | 1.555476e-48 | -8.615850e-47 |
| Msa0226800 | Msa1255120 | 0.816736 | 4.742344e-52 | -8.615850e-47 |
| Msa1226600 | Msa1255120 | 0.803405 | 3.541029e-49 | -8.615850e-47 |
| Msa1233770 | Msa1255120 | 0.819332 | 1.227910e-52 | -8.615850e-47 |
| Msa1243860 | Msa1255120 | 0.815925 | 7.201284e-52 | -8.615850e-47 |
| Msa1254990 | Msa1255120 | 0.823080 | 1.679319e-53 | -8.615850e-47 |
| Msa1255110 | Msa1255120 | 0.843726 | 1.173540e-58 | -8.615850e-47 |
| Msa1255120 | Msa1255130 | 0.825602 | 4.286880e-54 | -8.615850e-47 |
| Msa1255120 | Msa1255140 | 0.814552 | 1.453369e-51 | -8.615850e-47 |
| Msa1255120 | Msa1255150 | 0.807646 | 4.565864e-50 | -8.615850e-47 |
| Msa1255120 | Msa1257520 | 0.802673 | 5.017468e-49 | -8.615850e-47 |
| Msa1255120 | Msa1258770 | 0.838087 | 3.541993e-57 | -8.615850e-47 |
| Msa1255120 | Msa1276080 | 0.811057 | 8.468964e-51 | -8.615850e-47 |
| Msa1255120 | Msa1279340 | 0.808498 | 3.006447e-50 | -8.615850e-47 |
| Msa1255120 | Msa1280020 | 0.815378 | 9.535307e-52 | -8.615850e-47 |
| Msa1255120 | Msa1295560 | 0.843108 | 1.715549e-58 | -8.615850e-47 |
| Msa1255120 | Msa1295570 | 0.980927 | 2.305726e-151 | -8.615850e-47 |
| Msa1255120 | Msa1295580 | 0.916692 | 1.311086e-85 | -8.615850e-47 |
| Msa1255120 | Msa1295590 | 0.808689 | 2.736872e-50 | -8.615850e-47 |
| Msa1255120 | Msa1295600 | 0.854929 | 8.870617e-62 | -8.615850e-47 |
| Msa1255120 | Msa1298740 | 0.810254 | 1.263133e-50 | -8.615850e-47 |
| Msa1255120 | Msa1325980 | 0.815158 | 1.067053e-51 | -8.615850e-47 |
| Msa1255120 | Msa1326000 | 0.816896 | 4.365989e-52 | -8.615850e-47 |
| Msa1255120 | Msa1330280 | 0.844994 | 5.354899e-59 | -8.615850e-47 |
| Msa1255120 | Msa1331900 | 0.807562 | 4.757230e-50 | -8.615850e-47 |
| Msa1255120 | Msa1344940 | 0.841615 | 4.267806e-58 | -8.615850e-47 |
| Msa1255120 | Msa1353270 | 0.817838 | 2.678527e-52 | -8.615850e-47 |
| Msa1255120 | Msa1361090 | 0.813534 | 2.438660e-51 | -8.615850e-47 |
| Msa1255120 | Msa1366700 | 0.807194 | 5.695205e-50 | -8.615850e-47 |
| Msa1255120 | Msa1367600 | 0.812289 | 4.568741e-51 | -8.615850e-47 |
| Msa1255120 | Msa1368730 | 0.806380 | 8.462004e-50 | -8.615850e-47 |
| Msa1255120 | Msa1369900 | 0.845948 | 2.952419e-59 | -8.615850e-47 |
| Msa1255120 | Msa1371840 | 0.801919 | 7.173443e-49 | -8.615850e-47 |
| Msa1255120 | Msa1374810 | 0.809416 | 1.913187e-50 | -8.615850e-47 |
| Msa1255120 | Msa1379370 | 0.802728 | 4.888086e-49 | -8.615850e-47 |
| Msa1255120 | Msa1397110 | 0.810365 | 1.195386e-50 | -8.615850e-47 |
| Msa1255120 | Msa1403900 | 0.816407 | 5.618085e-52 | -8.615850e-47 |
| Msa1255120 | Msa1406550 | 0.807650 | 4.557140e-50 | -8.615850e-47 |
| Msa1255120 | Msa1406880 | 0.823559 | 1.297476e-53 | -8.615850e-47 |
| Msa1255120 | Msa1407710 | 0.824635 | 7.252341e-54 | -8.615850e-47 |
| Msa1255120 | Msa1408190 | 0.812611 | 3.885375e-51 | -8.615850e-47 |
| Msa1255120 | Msa1415250 | 0.808035 | 3.773510e-50 | -8.615850e-47 |
| Msa1255120 | Msa1416460 | 0.807050 | 6.108286e-50 | -8.615850e-47 |
| Msa1255120 | Msa1420130 | 0.805427 | 1.342175e-49 | -8.615850e-47 |
| Msa1255120 | Msa1422500 | 0.803317 | 3.692237e-49 | -8.615850e-47 |
| Msa1255120 | Msa1423550 | 0.800082 | 1.703236e-48 | -8.615850e-47 |
| Msa1255120 | Msa1430270 | 0.800166 | 1.637548e-48 | -8.615850e-47 |
| Msa1255120 | Msa1432350 | 0.836091 | 1.146315e-56 | -8.615850e-47 |
| Msa1255120 | Msa1448990 | 0.812976 | 3.232754e-51 | -8.615850e-47 |
| Msa1255120 | Msa1449510 | 0.809028 | 2.316956e-50 | -8.615850e-47 |
| Msa1255120 | Msa1449680 | 0.806633 | 7.480803e-50 | -8.615850e-47 |
| Msa1255120 | Msa1450420 | 0.826942 | 2.055941e-54 | -8.615850e-47 |
| Msa1255120 | Msa1451840 | 0.806076 | 9.806121e-50 | -8.615850e-47 |
| Msa1255120 | Msa1459590 | 0.812163 | 4.867431e-51 | -8.615850e-47 |
| Msa1255120 | Msa1464800 | 0.803051 | 4.191365e-49 | -8.615850e-47 |
| Msa0365870 | Msa1255120 | 0.801756 | 7.748229e-49 | -8.615850e-47 |
| Msa0372250 | Msa1255120 | 0.812268 | 4.617677e-51 | -8.615850e-47 |
| Msa0379390 | Msa1255120 | 0.803020 | 4.255369e-49 | -8.615850e-47 |
| Msa0380360 | Msa1255120 | 0.817194 | 3.742626e-52 | -8.615850e-47 |
| Msa0380430 | Msa1255120 | 0.811833 | 5.744565e-51 | -8.615850e-47 |
| Msa0380520 | Msa1255120 | 0.801360 | 9.341513e-49 | -8.615850e-47 |
| Msa0386390 | Msa1255120 | 0.815592 | 8.543884e-52 | -8.615850e-47 |
| Msa0394330 | Msa1255120 | 0.818708 | 1.702177e-52 | -8.615850e-47 |
| Msa0396970 | Msa1255120 | 0.816522 | 5.294275e-52 | -8.615850e-47 |
| Msa0397000 | Msa1255120 | 0.817108 | 3.913264e-52 | -8.615850e-47 |
| Msa0403670 | Msa1255120 | 0.845652 | 3.553793e-59 | -8.615850e-47 |
| Msa0405040 | Msa1255120 | 0.842779 | 2.099376e-58 | -8.615850e-47 |
| Msa0413180 | Msa1255120 | 0.805623 | 1.220951e-49 | -8.615850e-47 |
| Msa0413740 | Msa1255120 | 0.809378 | 1.949377e-50 | -8.615850e-47 |
| Msa0416000 | Msa1255120 | 0.806447 | 8.188274e-50 | -8.615850e-47 |
| Msa0421100 | Msa1255120 | 0.830367 | 3.057225e-55 | -8.615850e-47 |
| Msa0423590 | Msa1255120 | 0.806637 | 7.467485e-50 | -8.615850e-47 |
| Msa0423600 | Msa1255120 | 0.821466 | 3.978141e-53 | -8.615850e-47 |
| Msa0427590 | Msa1255120 | 0.806729 | 7.139755e-50 | -8.615850e-47 |
| Msa0432390 | Msa1255120 | 0.810719 | 1.002190e-50 | -8.615850e-47 |
| Msa0434630 | Msa1255120 | 0.808355 | 3.226133e-50 | -8.615850e-47 |
| Msa0438440 | Msa1255120 | 0.805432 | 1.338827e-49 | -8.615850e-47 |
| Msa0446480 | Msa1255120 | 0.811702 | 6.133858e-51 | -8.615850e-47 |
| Msa0470030 | Msa1255120 | 0.801654 | 8.131765e-49 | -8.615850e-47 |
| Msa0470650 | Msa1255120 | 0.810326 | 1.218682e-50 | -8.615850e-47 |
| Msa0471090 | Msa1255120 | 0.812588 | 3.930842e-51 | -8.615850e-47 |
| Msa0475740 | Msa1255120 | 0.806320 | 8.712163e-50 | -8.615850e-47 |
| Msa0476150 | Msa1255120 | 0.814035 | 1.890763e-51 | -8.615850e-47 |
| Msa0476180 | Msa1255120 | 0.825751 | 3.952402e-54 | -8.615850e-47 |
| Msa0479790 | Msa1255120 | 0.814327 | 1.629892e-51 | -8.615850e-47 |
| Msa1000470 | Msa1255120 | 0.836396 | 9.589614e-57 | -8.615850e-47 |
| Msa1002980 | Msa1255120 | 0.809624 | 1.726195e-50 | -8.615850e-47 |
| Msa1016110 | Msa1255120 | 0.815930 | 7.181939e-52 | -8.615850e-47 |
| Msa1028460 | Msa1255120 | 0.803727 | 3.036225e-49 | -8.615850e-47 |
| Msa1030440 | Msa1255120 | 0.804674 | 1.928708e-49 | -8.615850e-47 |
| Msa1031650 | Msa1255120 | 0.805841 | 1.098858e-49 | -8.615850e-47 |
| Msa1033160 | Msa1255120 | 0.818034 | 2.419676e-52 | -8.615850e-47 |
| Msa1033670 | Msa1255120 | 0.804750 | 1.859160e-49 | -8.615850e-47 |
| Msa1044040 | Msa1255120 | 0.814577 | 1.435315e-51 | -8.615850e-47 |
| Msa1058980 | Msa1255120 | 0.805632 | 1.215384e-49 | -8.615850e-47 |
| Msa1067430 | Msa1255120 | 0.808461 | 3.062373e-50 | -8.615850e-47 |
| Msa1070930 | Msa1255120 | 0.813634 | 2.318220e-51 | -8.615850e-47 |
| Msa1072080 | Msa1255120 | 0.811392 | 7.164946e-51 | -8.615850e-47 |
| Msa1080620 | Msa1255120 | 0.810913 | 9.099747e-51 | -8.615850e-47 |
| Msa1080690 | Msa1255120 | 0.805727 | 1.160906e-49 | -8.615850e-47 |
| Msa1081700 | Msa1255120 | 0.816101 | 6.579369e-52 | -8.615850e-47 |
| Msa1081850 | Msa1255120 | 0.802813 | 4.694616e-49 | -8.615850e-47 |
| Msa1092430 | Msa1255120 | 0.801780 | 7.659588e-49 | -8.615850e-47 |
| Msa1093390 | Msa1255120 | 0.811562 | 6.580513e-51 | -8.615850e-47 |
| Msa1096280 | Msa1255120 | 0.811375 | 7.224964e-51 | -8.615850e-47 |
| Msa0258380 | Msa1255120 | 0.828764 | 7.498415e-55 | -8.615850e-47 |
| Msa0258410 | Msa1255120 | 0.803136 | 4.025518e-49 | -8.615850e-47 |
| Msa0282860 | Msa1255120 | 0.804082 | 2.562303e-49 | -8.615850e-47 |
| Msa0296610 | Msa1255120 | 0.817724 | 2.842552e-52 | -8.615850e-47 |
| Msa0304020 | Msa1255120 | 0.803725 | 3.039087e-49 | -8.615850e-47 |
| Msa0305810 | Msa1255120 | 0.802163 | 6.392411e-49 | -8.615850e-47 |
| Msa0312780 | Msa1255120 | 0.829529 | 4.893227e-55 | -8.615850e-47 |
| Msa0321230 | Msa1255120 | 0.813112 | 3.018682e-51 | -8.615850e-47 |
| Msa0334980 | Msa1255120 | 0.803238 | 3.834227e-49 | -8.615850e-47 |
| Msa0342620 | Msa1255120 | 0.812323 | 4.491022e-51 | -8.615850e-47 |
| Msa0350020 | Msa1255120 | 0.810337 | 1.211818e-50 | -8.615850e-47 |
| Msa0352200 | Msa1255120 | 0.835258 | 1.862999e-56 | -8.615850e-47 |
| Msa0362840 | Msa1255120 | 0.815900 | 7.292546e-52 | -8.615850e-47 |
| Msa1130070 | Msa1255120 | 0.829998 | 3.761671e-55 | -8.615850e-47 |
| Msa1130650 | Msa1255120 | 0.815212 | 1.037703e-51 | -8.615850e-47 |
| Msa1151120 | Msa1255120 | 0.811622 | 6.383805e-51 | -8.615850e-47 |
| Msa1161160 | Msa1255120 | 0.830714 | 2.513389e-55 | -8.615850e-47 |
| Msa1184640 | Msa1255120 | 0.812123 | 4.967075e-51 | -8.615850e-47 |
| Msa1186210 | Msa1255120 | 0.813276 | 2.777516e-51 | -8.615850e-47 |
| Msa1207280 | Msa1255120 | 0.816173 | 6.337015e-52 | -8.615850e-47 |
| Msa1209650 | Msa1255120 | 0.800349 | 1.502644e-48 | -8.615850e-47 |
| Msa1214900 | Msa1255120 | 0.848944 | 4.437055e-60 | -8.615850e-47 |
| Msa1223600 | Msa1255120 | 0.805074 | 1.591111e-49 | -8.615850e-47 |
| Msa0489620 | Msa1255120 | 0.825287 | 5.089922e-54 | -8.615850e-47 |
| Msa0498320 | Msa1255120 | 0.840873 | 6.688189e-58 | -8.615850e-47 |
| Msa0503120 | Msa1255120 | 0.804670 | 1.932308e-49 | -8.615850e-47 |
| Msa0504730 | Msa1255120 | 0.808205 | 3.471681e-50 | -8.615850e-47 |
| Msa0505390 | Msa1255120 | 0.809058 | 2.282661e-50 | -8.615850e-47 |
| Msa0512130 | Msa1255120 | 0.813123 | 3.001130e-51 | -8.615850e-47 |
| Msa0513660 | Msa1255120 | 0.814403 | 1.568618e-51 | -8.615850e-47 |
| Msa0515830 | Msa1255120 | 0.826863 | 2.147607e-54 | -8.615850e-47 |
| Msa0517300 | Msa1255120 | 0.804759 | 1.851586e-49 | -8.615850e-47 |
| Msa0518160 | Msa1255120 | 0.805847 | 1.095289e-49 | -8.615850e-47 |
| Msa0524510 | Msa1255120 | 0.835588 | 1.537776e-56 | -8.615850e-47 |
| Msa0528170 | Msa1255120 | 0.836654 | 8.244813e-57 | -8.615850e-47 |
| Msa0528740 | Msa1255120 | 0.829060 | 6.357098e-55 | -8.615850e-47 |
| Msa0542040 | Msa1255120 | 0.804483 | 2.114451e-49 | -8.615850e-47 |
| Msa0547780 | Msa1255120 | 0.820698 | 5.977973e-53 | -8.615850e-47 |
| Msa0553350 | Msa1255120 | 0.819124 | 1.369175e-52 | -8.615850e-47 |
| Msa0553520 | Msa1255120 | 0.800917 | 1.150885e-48 | -8.615850e-47 |
| Msa0555980 | Msa1255120 | 0.813658 | 2.289715e-51 | -8.615850e-47 |
| Msa0567290 | Msa1255120 | 0.803823 | 2.900068e-49 | -8.615850e-47 |
| Msa0568810 | Msa1255120 | 0.811306 | 7.479993e-51 | -8.615850e-47 |
| Msa0574170 | Msa1255120 | 0.825041 | 5.819684e-54 | -8.615850e-47 |
| Msa0576420 | Msa1255120 | 0.806485 | 8.041836e-50 | -8.615850e-47 |
| Msa0583930 | Msa1255120 | 0.815404 | 9.408479e-52 | -8.615850e-47 |
| Msa0589290 | Msa1255120 | 0.805056 | 1.604526e-49 | -8.615850e-47 |
| Msa0846180 | Msa1255120 | 0.828529 | 8.546462e-55 | -8.615850e-47 |
| Msa0864150 | Msa1255120 | 0.812699 | 3.718085e-51 | -8.615850e-47 |
| Msa0873830 | Msa1255120 | 0.800259 | 1.567475e-48 | -8.615850e-47 |
| Msa0875130 | Msa1255120 | 0.832225 | 1.067229e-55 | -8.615850e-47 |
| Msa0881050 | Msa1255120 | 0.820898 | 5.377774e-53 | -8.615850e-47 |
| Msa0899140 | Msa1255120 | 0.802905 | 4.494293e-49 | -8.615850e-47 |
| Msa0901140 | Msa1255120 | 0.847183 | 1.358783e-59 | -8.615850e-47 |
| Msa0931730 | Msa1255120 | 0.827412 | 1.586801e-54 | -8.615850e-47 |
| Msa0968450 | Msa1255120 | 0.833377 | 5.522299e-56 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1255120 | MtrunA17_Chr8g0373111 | 98.611 | 72 | 1 | 0 | 1 | 72 | 1 | 72 | 1.06e-49 | 150 |
| Msa1255120 | MtrunA17_Chr8g0373121 | 98.611 | 72 | 1 | 0 | 1 | 72 | 1 | 72 | 1.06e-49 | 150 |
| Msa1255120 | MtrunA17_Chr8g0373131 | 97.222 | 72 | 2 | 0 | 1 | 72 | 1 | 72 | 3.36e-49 | 149 |
| Msa1255120 | MtrunA17_Chr5g0404301 | 82.258 | 62 | 11 | 0 | 3 | 64 | 2 | 63 | 1.06e-35 | 114 |
| Msa1255120 | MtrunA17_Chr8g0373101 | 68.571 | 70 | 21 | 1 | 1 | 70 | 1 | 69 | 3.10e-32 | 106 |
| Msa1255120 | MtrunA17_Chr3g0144631 | 64.615 | 65 | 22 | 1 | 5 | 68 | 16 | 80 | 1.12e-27 | 95.1 |
| Msa1255120 | MtrunA17_Chr1g0155181 | 55.224 | 67 | 29 | 1 | 2 | 67 | 4 | 70 | 6.04e-26 | 90.9 |
| Msa1255120 | MtrunA17_Chr6g0449111 | 57.576 | 66 | 27 | 1 | 2 | 66 | 7 | 72 | 2.73e-25 | 89.0 |
| Msa1255120 | MtrunA17_Chr5g0404101 | 54.688 | 64 | 28 | 1 | 5 | 67 | 19 | 82 | 1.38e-24 | 87.8 |
| Msa1255120 | MtrunA17_Chr3g0141601 | 55.072 | 69 | 30 | 1 | 2 | 69 | 4 | 72 | 6.39e-24 | 85.9 |
| Msa1255120 | MtrunA17_Chr3g0081631 | 55.072 | 69 | 29 | 1 | 2 | 68 | 7 | 75 | 8.47e-23 | 83.2 |
| Msa1255120 | MtrunA17_Chr7g0255841 | 59.016 | 61 | 24 | 1 | 8 | 67 | 15 | 75 | 3.53e-22 | 81.6 |
| Msa1255120 | MtrunA17_Chr5g0429521 | 54.930 | 71 | 31 | 1 | 1 | 70 | 25 | 95 | 7.70e-21 | 82.8 |
| Msa1255120 | MtrunA17_Chr3g0141641 | 55.385 | 65 | 28 | 1 | 4 | 67 | 2 | 66 | 6.53e-20 | 75.9 |
| Msa1255120 | MtrunA17_Chr3g0104071 | 54.412 | 68 | 30 | 1 | 2 | 68 | 40 | 107 | 8.68e-20 | 80.1 |
| Msa1255120 | MtrunA17_Chr7g0241761 | 51.429 | 70 | 33 | 1 | 2 | 70 | 32 | 101 | 7.15e-18 | 75.1 |
| Msa1255120 | MtrunA17_Chr8g0365011 | 43.836 | 73 | 40 | 1 | 1 | 72 | 4 | 76 | 5.99e-17 | 72.4 |
| Msa1255120 | MtrunA17_Chr5g0436501 | 50.769 | 65 | 31 | 1 | 3 | 66 | 25 | 89 | 5.16e-16 | 69.7 |
| Msa1255120 | MtrunA17_Chr1g0194071 | 47.143 | 70 | 35 | 1 | 3 | 70 | 9 | 78 | 3.30e-15 | 63.9 |
| Msa1255120 | MtrunA17_Chr7g0270711 | 50.820 | 61 | 28 | 1 | 3 | 61 | 9 | 69 | 1.29e-14 | 62.4 |
| Msa1255120 | MtrunA17_Chr1g0162081 | 38.571 | 70 | 42 | 1 | 2 | 70 | 9 | 78 | 2.60e-14 | 65.1 |
| Msa1255120 | MtrunA17_Chr8g0364741 | 37.500 | 72 | 44 | 1 | 2 | 72 | 7 | 78 | 1.87e-13 | 60.5 |
| Msa1255120 | MtrunA17_Chr1g0210471 | 40.000 | 65 | 38 | 1 | 3 | 66 | 22 | 86 | 1.32e-11 | 57.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1255120 | AT4G39250.1 | 66.154 | 65 | 21 | 1 | 5 | 68 | 14 | 78 | 1.41e-28 | 98.2 |
| Msa1255120 | AT1G75250.2 | 62.687 | 67 | 24 | 1 | 3 | 68 | 10 | 76 | 4.76e-27 | 94.4 |
| Msa1255120 | AT1G75250.1 | 64.615 | 65 | 22 | 1 | 5 | 68 | 12 | 76 | 6.58e-27 | 94.7 |
| Msa1255120 | AT2G21650.1 | 56.522 | 69 | 29 | 1 | 5 | 72 | 14 | 82 | 8.41e-26 | 91.3 |
| Msa1255120 | AT1G19510.1 | 61.290 | 62 | 23 | 1 | 8 | 68 | 15 | 76 | 7.36e-24 | 86.3 |
| Msa1255120 | AT2G18328.1 | 55.385 | 65 | 27 | 2 | 8 | 71 | 14 | 77 | 1.04e-18 | 72.8 |
| Msa1255120 | AT2G38090.1 | 51.429 | 70 | 33 | 1 | 2 | 70 | 26 | 95 | 3.22e-18 | 76.3 |
| Msa1255120 | AT5G58900.1 | 52.174 | 69 | 32 | 1 | 2 | 69 | 31 | 99 | 1.33e-17 | 74.3 |
| Msa1255120 | AT4G36570.1 | 65.909 | 44 | 14 | 1 | 5 | 47 | 12 | 55 | 6.84e-16 | 65.1 |
| Msa1255120 | AT5G05790.2 | 45.714 | 70 | 37 | 1 | 2 | 70 | 28 | 97 | 9.27e-16 | 69.3 |
| Msa1255120 | AT5G05790.1 | 45.714 | 70 | 37 | 1 | 2 | 70 | 28 | 97 | 9.27e-16 | 69.3 |
| Msa1255120 | AT3G11280.2 | 49.206 | 63 | 31 | 1 | 5 | 66 | 33 | 95 | 2.42e-15 | 68.2 |
| Msa1255120 | AT3G11280.1 | 49.206 | 63 | 31 | 1 | 5 | 66 | 33 | 95 | 2.42e-15 | 68.2 |
| Msa1255120 | AT5G08520.1 | 47.826 | 69 | 35 | 1 | 5 | 72 | 12 | 80 | 3.62e-14 | 65.1 |
| Msa1255120 | AT5G04760.1 | 43.284 | 67 | 37 | 1 | 1 | 66 | 1 | 67 | 3.29e-13 | 61.6 |
| Msa1255120 | AT5G01200.1 | 45.070 | 71 | 37 | 2 | 4 | 72 | 29 | 99 | 1.61e-12 | 60.5 |
| Msa1255120 | AT1G49010.1 | 41.429 | 70 | 37 | 2 | 1 | 66 | 4 | 73 | 5.46e-12 | 59.3 |
Find 26 sgRNAs with CRISPR-Local
Find 163 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCAACATTGTGCCATCTTTC+TGG | 0.106622 | 8_2:-53516973 | None:intergenic |
| GTACAATGTAAGGAAATTAA+AGG | 0.280704 | 8_2:-53519260 | None:intergenic |
| CAAGCTTAATTATTGTGTTC+TGG | 0.297492 | 8_2:-53519062 | None:intergenic |
| AATGCATACTAGTGTATCTT+TGG | 0.359894 | 8_2:+53519124 | Msa1255120:three_prime_UTR |
| ATTAAAGATACGTCAAATAC+TGG | 0.365763 | 8_2:-53519094 | None:intergenic |
| ATAGAAAGAAATTAATATAT+AGG | 0.371156 | 8_2:-53519204 | None:intergenic |
| TTCATTCATTCATCAACAAA+TGG | 0.409031 | 8_2:+53516882 | Msa1255120:exon |
| TGTAACGAGGAAAAGGGATA+TGG | 0.417505 | 8_2:-53517077 | None:intergenic |
| TACGTTGAACATCTTCTTTG+AGG | 0.435409 | 8_2:-53517044 | None:intergenic |
| CAAACTGTTTGAACAAGCAT+TGG | 0.467435 | 8_2:+53516930 | Msa1255120:CDS |
| TCATTATTGTAAGTTTATGA+AGG | 0.467482 | 8_2:+53519317 | Msa1255120:three_prime_UTR |
| TACAATGTAAGGAAATTAAA+GGG | 0.482580 | 8_2:-53519259 | None:intergenic |
| CACAATGTTGCCAAAGTGGT+TGG | 0.534351 | 8_2:+53516985 | Msa1255120:CDS |
| ATCAACAAATGGCAACCTCA+TGG | 0.544947 | 8_2:+53516893 | Msa1255120:exon |
| AAAACTAACACCAACTCCTA+AGG | 0.547909 | 8_2:+53517099 | Msa1255120:CDS |
| AAGATACGTCAAATACTGGT+TGG | 0.552145 | 8_2:-53519090 | None:intergenic |
| ATAGAGAAACTCCAGAAAGA+TGG | 0.558722 | 8_2:+53516962 | Msa1255120:CDS |
| AGAAGAGTGCCACATTCACT+TGG | 0.560492 | 8_2:-53519179 | None:intergenic |
| ATATATTATACCTTAGGAGT+TGG | 0.560505 | 8_2:-53517109 | None:intergenic |
| TGTAAGGAAATTAAAGGGCG+AGG | 0.564312 | 8_2:-53519254 | None:intergenic |
| AGTGCCACATTCACTTGGCA+AGG | 0.606187 | 8_2:-53519174 | None:intergenic |
| ATGGCACAATGTTGCCAAAG+TGG | 0.642850 | 8_2:+53516981 | Msa1255120:CDS |
| TGGCAACCTCATGGACTGCG+AGG | 0.652849 | 8_2:+53516902 | Msa1255120:CDS |
| TGCACCTTGCCAAGTGAATG+TGG | 0.653689 | 8_2:+53519170 | Msa1255120:three_prime_UTR |
| GTTCTGCCTCGCAGTCCATG+AGG | 0.665063 | 8_2:-53516908 | None:intergenic |
| GATGTTCAACGTATTGAGCG+TGG | 0.669371 | 8_2:+53517054 | Msa1255120:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATTGTTAAAAAAAGAATA+TGG | - | chr8_2:53516855-53516874 | None:intergenic | 10.0% |
| !!! | TTAAATTATTATGTTTTTGA+GGG | + | chr8_2:53517169-53517188 | Msa1255120:intron | 10.0% |
| !! | TAATATCTAATTAAATTTAG+GGG | - | chr8_2:53517233-53517252 | None:intergenic | 10.0% |
| !!! | TTAATTGAGATTTTATATTA+TGG | - | chr8_2:53517895-53517914 | None:intergenic | 10.0% |
| !!! | ATATGTTTAATTTTTTTCTT+AGG | + | chr8_2:53518070-53518089 | Msa1255120:intron | 10.0% |
| !! | ATTTAATGTTATATTGTATT+GGG | - | chr8_2:53518404-53518423 | None:intergenic | 10.0% |
| !! | TATTTAATGTTATATTGTAT+TGG | - | chr8_2:53518405-53518424 | None:intergenic | 10.0% |
| !! | ATATTATATAGTTTATTCAA+TGG | - | chr8_2:53518674-53518693 | None:intergenic | 10.0% |
| !! | AATAAACTATATAATATCAA+TGG | + | chr8_2:53518677-53518696 | Msa1255120:intron | 10.0% |
| !!! | ATAATAAGTATTTGAAATTT+TGG | + | chr8_2:53518933-53518952 | Msa1255120:intron | 10.0% |
| !!! | TAATAAGTATTTGAAATTTT+GGG | + | chr8_2:53518934-53518953 | Msa1255120:intron | 10.0% |
| !! | ATAGAAAGAAATTAATATAT+AGG | - | chr8_2:53519207-53519226 | None:intergenic | 10.0% |
| !! | AACATAATAATTTAAGAACA+TGG | - | chr8_2:53517164-53517183 | None:intergenic | 15.0% |
| !!! | CTTAAATTATTATGTTTTTG+AGG | + | chr8_2:53517168-53517187 | Msa1255120:intron | 15.0% |
| !!! | TTTTAGTTAAACATAGTTTA+GGG | - | chr8_2:53517260-53517279 | None:intergenic | 15.0% |
| !!! | ATTTTAGTTAAACATAGTTT+AGG | - | chr8_2:53517261-53517280 | None:intergenic | 15.0% |
| !!! | TAAGAAAATATTCCTTTTTT+AGG | + | chr8_2:53517450-53517469 | Msa1255120:intron | 15.0% |
| !! | TTATTCAATGAATCTAAAAA+AGG | + | chr8_2:53517524-53517543 | Msa1255120:intron | 15.0% |
| !!! | TATTTTCTTATATTTGAGAT+CGG | + | chr8_2:53517549-53517568 | Msa1255120:intron | 15.0% |
| !!! | TGTTATTTTTACAAACATAT+AGG | + | chr8_2:53517612-53517631 | Msa1255120:intron | 15.0% |
| !!! | TAAGAAAAGTGTATAAATAA+AGG | + | chr8_2:53518244-53518263 | Msa1255120:intron | 15.0% |
| !!! | AAGAAAAGTGTATAAATAAA+GGG | + | chr8_2:53518245-53518264 | Msa1255120:intron | 15.0% |
| !!! | AAGAAAAGTGTATAAATAAA+GGG | - | chr8_2:53518245-53518264 | None:intergenic | 15.0% |
| !!! | TAAGAAAAGTGTATAAATAA+AGG | - | chr8_2:53518244-53518263 | None:intergenic | 15.0% |
| !! | TATTTAGTGTTATATTGTAT+TGG | + | chr8_2:53518541-53518560 | Msa1255120:intron | 15.0% |
| !! | ATTTAGTGTTATATTGTATT+GGG | + | chr8_2:53518542-53518561 | Msa1255120:intron | 15.0% |
| !! | TGTTAAAAAAAGAATATGGT+TGG | - | chr8_2:53516851-53516870 | None:intergenic | 20.0% |
| !! | TTTAGTTAAACATAGTTTAG+GGG | - | chr8_2:53517259-53517278 | None:intergenic | 20.0% |
| !!! | TTAAATTAGCCTACTTAAAT+TGG | - | chr8_2:53517379-53517398 | None:intergenic | 20.0% |
| !!! | TATTTTCTTATATTTGAGAC+CGG | - | chr8_2:53517440-53517459 | None:intergenic | 20.0% |
| !! | TTAAATTTCGTTGTATATGT+TGG | + | chr8_2:53517801-53517820 | Msa1255120:intron | 20.0% |
| !! | ATTCATCTCTCATAATATTA+AGG | + | chr8_2:53517865-53517884 | Msa1255120:intron | 20.0% |
| !!! | AGTTATTAGTTTTATATACG+TGG | + | chr8_2:53518020-53518039 | Msa1255120:intron | 20.0% |
| !!! | AGAAAAGTGTATAAATAAAG+GGG | + | chr8_2:53518246-53518265 | Msa1255120:intron | 20.0% |
| !! | AAAGTGGAATATATTGTATT+GGG | + | chr8_2:53518269-53518288 | Msa1255120:intron | 20.0% |
| !!! | GACACTTTTTTTTAGAAAAT+GGG | - | chr8_2:53518611-53518630 | None:intergenic | 20.0% |
| !! | AAAGTGGAATATATTGTATT+GGG | - | chr8_2:53518269-53518288 | None:intergenic | 20.0% |
| !!! | AGAAAAGTGTATAAATAAAG+GGG | - | chr8_2:53518246-53518265 | None:intergenic | 20.0% |
| !!! | GACACTTTTTTTTAGAAAAT+GGG | + | chr8_2:53518611-53518630 | Msa1255120:intron | 20.0% |
| !!! | TTATATAGTTGTTTTTGAAG+AGG | - | chr8_2:53518857-53518876 | None:intergenic | 20.0% |
| !!! | TTTTTTCCGTATAAAATTGA+TGG | - | chr8_2:53518884-53518903 | None:intergenic | 20.0% |
| !! | TACAATGTAAGGAAATTAAA+GGG | - | chr8_2:53519262-53519281 | None:intergenic | 20.0% |
| !!! | TTTATTTTTGGTACAATGTA+AGG | - | chr8_2:53519273-53519292 | None:intergenic | 20.0% |
| !! | TCATTATTGTAAGTTTATGA+AGG | + | chr8_2:53519317-53519336 | Msa1255120:three_prime_UTR | 20.0% |
| ! | TTCATTCATTCATCAACAAA+TGG | + | chr8_2:53516882-53516901 | Msa1255120:exon | 25.0% |
| ! | ATATATTATACCTTAGGAGT+TGG | - | chr8_2:53517112-53517131 | None:intergenic | 25.0% |
| ! | CAGTACATATATTATACCTT+AGG | - | chr8_2:53517118-53517137 | None:intergenic | 25.0% |
| ! | ATACAACGAAATTTAAGTAG+TGG | - | chr8_2:53517797-53517816 | None:intergenic | 25.0% |
| ! | AATTCTTATCCCATTCAATA+TGG | - | chr8_2:53517967-53517986 | None:intergenic | 25.0% |
| ! | TATTGAATGGGATAAGAATT+TGG | + | chr8_2:53517967-53517986 | Msa1255120:intron | 25.0% |
| ! | ATTGAATGGGATAAGAATTT+GGG | + | chr8_2:53517968-53517987 | Msa1255120:intron | 25.0% |
| ! | GAAAGTGGAATATATTGTAT+TGG | + | chr8_2:53518268-53518287 | Msa1255120:intron | 25.0% |
| !!! | GGACACTTTTTTTTAGAAAA+TGG | - | chr8_2:53518610-53518629 | None:intergenic | 25.0% |
| !!! | TGAAATGAGTCAGTTTTTTT+GGG | - | chr8_2:53518357-53518376 | None:intergenic | 25.0% |
| !!! | TTGAAATGAGTCAGTTTTTT+TGG | - | chr8_2:53518358-53518377 | None:intergenic | 25.0% |
| ! | GAAAGTGGAATATATTGTAT+TGG | - | chr8_2:53518268-53518287 | None:intergenic | 25.0% |
| !! | TTGAAATGAGTCAGTTATTT+TGG | + | chr8_2:53518588-53518607 | Msa1255120:intron | 25.0% |
| !!! | TGAAATGAGTCAGTTATTTT+GGG | + | chr8_2:53518589-53518608 | Msa1255120:intron | 25.0% |
| !!! | GGACACTTTTTTTTAGAAAA+TGG | + | chr8_2:53518610-53518629 | Msa1255120:intron | 25.0% |
| ! | GTTTATTCAATGGACAATAT+AGG | - | chr8_2:53518664-53518683 | None:intergenic | 25.0% |
| !! | AACCTTCCATCAATTTTATA+CGG | + | chr8_2:53518875-53518894 | Msa1255120:intron | 25.0% |
| ! | ATTAAAGATACGTCAAATAC+TGG | - | chr8_2:53519097-53519116 | None:intergenic | 25.0% |
| ! | GTACAATGTAAGGAAATTAA+AGG | - | chr8_2:53519263-53519282 | None:intergenic | 25.0% |
| !!! | TAGTTTTGTAACGAGGAAAA+GGG | - | chr8_2:53517086-53517105 | None:intergenic | 30.0% |
| !!! | TTAGTTTTGTAACGAGGAAA+AGG | - | chr8_2:53517087-53517106 | None:intergenic | 30.0% |
| ATTTAGAAACTAAACCCACT+TGG | + | chr8_2:53517279-53517298 | Msa1255120:intron | 30.0% | |
| ! | TCTCTAGTTCCAATTTAAGT+AGG | + | chr8_2:53517367-53517386 | Msa1255120:intron | 30.0% |
| CTACTCAATGAACCTAAAAA+AGG | - | chr8_2:53517465-53517484 | None:intergenic | 30.0% | |
| CATTGAGTAGTTAATGTATC+TGG | + | chr8_2:53517475-53517494 | Msa1255120:intron | 30.0% | |
| ! | TTTCTTATATTTGAGATCGG+AGG | + | chr8_2:53517552-53517571 | Msa1255120:intron | 30.0% |
| ! | TTCTTATATTTGAGATCGGA+GGG | + | chr8_2:53517553-53517572 | Msa1255120:intron | 30.0% |
| TGCTTATTCTGCACAATTTA+GGG | - | chr8_2:53517640-53517659 | None:intergenic | 30.0% | |
| TTGCTTATTCTGCACAATTT+AGG | - | chr8_2:53517641-53517660 | None:intergenic | 30.0% | |
| AATTTCTCTCCCTATTACTT+TGG | + | chr8_2:53517763-53517782 | Msa1255120:intron | 30.0% | |
| GCGTAAAAACCAAAGTAATA+GGG | - | chr8_2:53517775-53517794 | None:intergenic | 30.0% | |
| CAAGAAATTGTCTCAACAAA+GGG | + | chr8_2:53517829-53517848 | Msa1255120:intron | 30.0% | |
| ! | TACTTAAAGTACTTGTGCTA+TGG | + | chr8_2:53517937-53517956 | Msa1255120:intron | 30.0% |
| ! | ACTTAAAGTACTTGTGCTAT+GGG | + | chr8_2:53517938-53517957 | Msa1255120:intron | 30.0% |
| !! | AATAACTGTCGCACTTTTTA+GGG | - | chr8_2:53518007-53518026 | None:intergenic | 30.0% |
| !! | TAATAACTGTCGCACTTTTT+AGG | - | chr8_2:53518008-53518027 | None:intergenic | 30.0% |
| TGTATAAATAAAGGGGAAAG+TGG | + | chr8_2:53518253-53518272 | Msa1255120:intron | 30.0% | |
| AGAAAATGGGTCATTTATTC+CGG | - | chr8_2:53518322-53518341 | None:intergenic | 30.0% | |
| TGTATAAATAAAGGGGAAAG+TGG | - | chr8_2:53518253-53518272 | None:intergenic | 30.0% | |
| TTGAAGTTTGAATTCCAAAG+AGG | + | chr8_2:53518734-53518753 | Msa1255120:intron | 30.0% | |
| !!! | GATTCACTTTTTTTCCTCTT+TGG | - | chr8_2:53518751-53518770 | None:intergenic | 30.0% |
| TTCCGTATAAAATTGATGGA+AGG | - | chr8_2:53518880-53518899 | None:intergenic | 30.0% | |
| CAAGCTTAATTATTGTGTTC+TGG | - | chr8_2:53519065-53519084 | None:intergenic | 30.0% | |
| AATGCATACTAGTGTATCTT+TGG | + | chr8_2:53519124-53519143 | Msa1255120:three_prime_UTR | 30.0% | |
| CAAACTGTTTGAACAAGCAT+TGG | + | chr8_2:53516930-53516949 | Msa1255120:CDS | 35.0% | |
| ATAGAGAAACTCCAGAAAGA+TGG | + | chr8_2:53516962-53516981 | Msa1255120:CDS | 35.0% | |
| !! | AACTGATTTTCCAACCACTT+TGG | - | chr8_2:53516998-53517017 | None:intergenic | 35.0% |
| TACGTTGAACATCTTCTTTG+AGG | - | chr8_2:53517047-53517066 | None:intergenic | 35.0% | |
| !!! | TTGGTGTTAGTTTTGTAACG+AGG | - | chr8_2:53517093-53517112 | None:intergenic | 35.0% |
| AAAACTAACACCAACTCCTA+AGG | + | chr8_2:53517099-53517118 | Msa1255120:CDS | 35.0% | |
| AAAGATCAGGCTATACTCTT+TGG | + | chr8_2:53517199-53517218 | Msa1255120:intron | 35.0% | |
| !!! | GCATAGTGGTATTGACTTTT+AGG | + | chr8_2:53517306-53517325 | Msa1255120:intron | 35.0% |
| !!! | AATTTTGAAACTACTCCCTC+CGG | + | chr8_2:53517418-53517437 | Msa1255120:intron | 35.0% |
| ! | TTCTTATATTTGAGACCGGA+GGG | - | chr8_2:53517436-53517455 | None:intergenic | 35.0% |
| ! | TTTCTTATATTTGAGACCGG+AGG | - | chr8_2:53517437-53517456 | None:intergenic | 35.0% |
| GGCGTAAAAACCAAAGTAAT+AGG | - | chr8_2:53517776-53517795 | None:intergenic | 35.0% | |
| CCTTTGTTGAGACAATTTCT+TGG | - | chr8_2:53517831-53517850 | None:intergenic | 35.0% | |
| CCAAGAAATTGTCTCAACAA+AGG | + | chr8_2:53517828-53517847 | Msa1255120:intron | 35.0% | |
| GCACAAGTACTTTAAGTACA+CGG | - | chr8_2:53517935-53517954 | None:intergenic | 35.0% | |
| ! | CTTAAAGTACTTGTGCTATG+GGG | + | chr8_2:53517939-53517958 | Msa1255120:intron | 35.0% |
| ! | TTAAAGTACTTGTGCTATGG+GGG | + | chr8_2:53517940-53517959 | Msa1255120:intron | 35.0% |
| TAAGTCGTTGTTTAAGTGCA+TGG | - | chr8_2:53518126-53518145 | None:intergenic | 35.0% | |
| ! | AACAACGACTTATGACTTGT+CGG | + | chr8_2:53518134-53518153 | Msa1255120:intron | 35.0% |
| CAAAGTAGGTCAATTATACC+GGG | - | chr8_2:53518505-53518524 | None:intergenic | 35.0% | |
| CCAAAGTAGGTCAATTATAC+CGG | - | chr8_2:53518504-53518523 | None:intergenic | 35.0% | |
| TCTGTGTGAAAAACCAAAGT+AGG | - | chr8_2:53518491-53518510 | None:intergenic | 35.0% | |
| GAAAATGGGTCATTTATTCC+GGG | - | chr8_2:53518321-53518340 | None:intergenic | 35.0% | |
| TCTGTGTGAAAAACCAAAGT+AGG | + | chr8_2:53518491-53518510 | Msa1255120:intron | 35.0% | |
| CCAAAGTAGGTCAATTATAC+CGG | + | chr8_2:53518504-53518523 | Msa1255120:intron | 35.0% | |
| CAAAGTAGGTCAATTATACC+GGG | + | chr8_2:53518505-53518524 | Msa1255120:intron | 35.0% | |
| !!! | GTTGTTTTTGAAGAGGAGAA+AGG | - | chr8_2:53518850-53518869 | None:intergenic | 35.0% |
| AAGATACGTCAAATACTGGT+TGG | - | chr8_2:53519093-53519112 | None:intergenic | 35.0% | |
| ATCAACAAATGGCAACCTCA+TGG | + | chr8_2:53516893-53516912 | Msa1255120:exon | 40.0% | |
| TGTAACGAGGAAAAGGGATA+TGG | - | chr8_2:53517080-53517099 | None:intergenic | 40.0% | |
| TGAGGGAAGTCTAAAAGATC+AGG | + | chr8_2:53517186-53517205 | Msa1255120:intron | 40.0% | |
| GAAACTAAACCCACTTGGAT+TGG | + | chr8_2:53517284-53517303 | Msa1255120:intron | 40.0% | |
| GAATTGAACCTGAGATCTCA+AGG | - | chr8_2:53517344-53517363 | None:intergenic | 40.0% | |
| TATGGGGGTCCATATTGAAT+GGG | + | chr8_2:53517955-53517974 | Msa1255120:intron | 40.0% | |
| GTGCATGGACATATTGTAGT+TGG | - | chr8_2:53518111-53518130 | None:intergenic | 40.0% | |
| ATTATATACTACCTCCGTCC+CGG | + | chr8_2:53518188-53518207 | Msa1255120:intron | 40.0% | |
| CCGGTATAATTGACCTACTT+TGG | + | chr8_2:53518207-53518226 | Msa1255120:intron | 40.0% | |
| CCGGTATAATTGACCTACTT+TGG | - | chr8_2:53518207-53518226 | None:intergenic | 40.0% | |
| AAATAATACTACCTCCGTCC+CGG | - | chr8_2:53518526-53518545 | None:intergenic | 40.0% | |
| TTGTTTGAACCTGCAAGCTT+GGG | - | chr8_2:53518704-53518723 | None:intergenic | 40.0% | |
| TTTGTTTGAACCTGCAAGCT+TGG | - | chr8_2:53518705-53518724 | None:intergenic | 40.0% | |
| ! | TCTTTTCCGATATACTTCGC+AGG | + | chr8_2:53519024-53519043 | Msa1255120:intron | 40.0% |
| CAAGAACCTGCGAAGTATAT+CGG | - | chr8_2:53519033-53519052 | None:intergenic | 40.0% | |
| TGTAAGGAAATTAAAGGGCG+AGG | - | chr8_2:53519257-53519276 | None:intergenic | 40.0% | |
| GCAACATTGTGCCATCTTTC+TGG | - | chr8_2:53516976-53516995 | None:intergenic | 45.0% | |
| ATGGCACAATGTTGCCAAAG+TGG | + | chr8_2:53516981-53517000 | Msa1255120:CDS | 45.0% | |
| CACAATGTTGCCAAAGTGGT+TGG | + | chr8_2:53516985-53517004 | Msa1255120:CDS | 45.0% | |
| GATGTTCAACGTATTGAGCG+TGG | + | chr8_2:53517054-53517073 | Msa1255120:CDS | 45.0% | |
| ACCACTATGCCAATCCAAGT+GGG | - | chr8_2:53517296-53517315 | None:intergenic | 45.0% | |
| TACCACTATGCCAATCCAAG+TGG | - | chr8_2:53517297-53517316 | None:intergenic | 45.0% | |
| GAGATCTCAAGGAAACTCTC+AGG | - | chr8_2:53517333-53517352 | None:intergenic | 45.0% | |
| GAGAGTTTCCTTGAGATCTC+AGG | + | chr8_2:53517333-53517352 | Msa1255120:intron | 45.0% | |
| CTATGGGGGTCCATATTGAA+TGG | + | chr8_2:53517954-53517973 | Msa1255120:intron | 45.0% | |
| GTAGGTCAATTATACCGGGA+CGG | - | chr8_2:53518509-53518528 | None:intergenic | 45.0% | |
| ATGGGTCATTTATTCCGGGA+CGG | - | chr8_2:53518317-53518336 | None:intergenic | 45.0% | |
| GTAGGTCAATTATACCGGGA+CGG | + | chr8_2:53518509-53518528 | Msa1255120:intron | 45.0% | |
| ATGGGTCAGTTATTCCGAGA+CGG | + | chr8_2:53518629-53518648 | Msa1255120:intron | 45.0% | |
| ATAGGATACTCCTTCCGTCT+CGG | - | chr8_2:53518646-53518665 | None:intergenic | 45.0% | |
| TGTTTGAACCTGCAAGCTTG+GGG | - | chr8_2:53518703-53518722 | None:intergenic | 45.0% | |
| !! | AGAAGAGTGCCACATTCACT+TGG | - | chr8_2:53519182-53519201 | None:intergenic | 45.0% |
| !! | TTAATATCTAATTAAATTTA+GGG | - | chr8_2:53517234-53517253 | None:intergenic | 5.0% |
| !! | TTTAATATCTAATTAAATTT+AGG | - | chr8_2:53517235-53517254 | None:intergenic | 5.0% |
| !!! | TAAATACAATATTTTATTTT+TGG | - | chr8_2:53519285-53519304 | None:intergenic | 5.0% |
| !! | ACCCACTTGGATTGGCATAG+TGG | + | chr8_2:53517292-53517311 | Msa1255120:intron | 50.0% |
| GTCATTTATTCCGGGACGGA+GGG | - | chr8_2:53518313-53518332 | None:intergenic | 50.0% | |
| GTCAGTTATTCCGAGACGGA+AGG | + | chr8_2:53518633-53518652 | Msa1255120:intron | 50.0% | |
| TGCACCTTGCCAAGTGAATG+TGG | + | chr8_2:53519170-53519189 | Msa1255120:three_prime_UTR | 50.0% | |
| AGTGCCACATTCACTTGGCA+AGG | - | chr8_2:53519177-53519196 | None:intergenic | 50.0% | |
| GGTCAATTATACCGGGACGG+AGG | - | chr8_2:53518512-53518531 | None:intergenic | 55.0% | |
| AAGTAGTACTCCCTCCGTCC+CGG | + | chr8_2:53518300-53518319 | Msa1255120:intron | 55.0% | |
| GGTCATTTATTCCGGGACGG+AGG | - | chr8_2:53518314-53518333 | None:intergenic | 55.0% | |
| GGTCAATTATACCGGGACGG+AGG | + | chr8_2:53518512-53518531 | Msa1255120:intron | 55.0% | |
| ATCAATGGCCCCAAGCTTGC+AGG | + | chr8_2:53518692-53518711 | Msa1255120:intron | 55.0% | |
| ! | TGGCAACCTCATGGACTGCG+AGG | + | chr8_2:53516902-53516921 | Msa1255120:CDS | 60.0% |
| GTTCTGCCTCGCAGTCCATG+AGG | - | chr8_2:53516911-53516930 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_2 | gene | 53516837 | 53519388 | 53516837 | ID=Msa1255120;Name=Msa1255120 |
| chr8_2 | mRNA | 53516837 | 53519388 | 53516837 | ID=Msa1255120-mRNA-1;Parent=Msa1255120;Name=Msa1255120-mRNA-1;_AED=0.14;_eAED=0.14;_QI=64|0|0.5|1|0|0.5|2|343|72 |
| chr8_2 | exon | 53516837 | 53517119 | 53516837 | ID=Msa1255120-mRNA-1:exon:16571;Parent=Msa1255120-mRNA-1 |
| chr8_2 | exon | 53519046 | 53519388 | 53519046 | ID=Msa1255120-mRNA-1:exon:16572;Parent=Msa1255120-mRNA-1 |
| chr8_2 | five_prime_UTR | 53516837 | 53516900 | 53516837 | ID=Msa1255120-mRNA-1:five_prime_utr;Parent=Msa1255120-mRNA-1 |
| chr8_2 | CDS | 53516901 | 53517119 | 53516901 | ID=Msa1255120-mRNA-1:cds;Parent=Msa1255120-mRNA-1 |
| chr8_2 | three_prime_UTR | 53519046 | 53519388 | 53519046 | ID=Msa1255120-mRNA-1:three_prime_utr;Parent=Msa1255120-mRNA-1 |
| Gene Sequence |
| Protein sequence |
