Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0732710 | AES98251.1 | 61.672 | 861 | 104 | 13 | 1 | 636 | 1 | 860 | 0.0 | 942 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0732710 | sp|Q8L7S0|ULP2B_ARATH | 47.287 | 387 | 153 | 6 | 159 | 499 | 373 | 754 | 4.03e-95 | 316 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0732710 | G7KBL6 | 61.672 | 861 | 104 | 13 | 1 | 636 | 1 | 860 | 0.0 | 942 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0015750 | Msa0732710 | 0.813992 | 1.932868e-51 | -8.615850e-47 |
| Msa0118050 | Msa0732710 | 0.811502 | 6.779210e-51 | -8.615850e-47 |
| Msa0604350 | Msa0732710 | 0.823489 | 1.347473e-53 | -8.615850e-47 |
| Msa0636170 | Msa0732710 | 0.825427 | 4.716457e-54 | -8.615850e-47 |
| Msa0694370 | Msa0732710 | 0.801650 | 8.145612e-49 | -8.615850e-47 |
| Msa0726140 | Msa0732710 | 0.815988 | 6.969928e-52 | -8.615850e-47 |
| Msa0729800 | Msa0732710 | 0.830571 | 2.725090e-55 | -8.615850e-47 |
| Msa0732540 | Msa0732710 | 0.810809 | 9.585349e-51 | -8.615850e-47 |
| Msa0732710 | Msa0733290 | 0.830181 | 3.392688e-55 | -8.615850e-47 |
| Msa0732710 | Msa0743810 | 0.842825 | 2.040605e-58 | -8.615850e-47 |
| Msa0732710 | Msa0745060 | 0.852435 | 4.626495e-61 | -8.615850e-47 |
| Msa0732710 | Msa0766630 | 0.801118 | 1.047084e-48 | -8.615850e-47 |
| Msa0732710 | Msa0767720 | 0.800311 | 1.529934e-48 | -8.615850e-47 |
| Msa0732710 | Msa0775300 | 0.879405 | 1.279997e-69 | -8.615850e-47 |
| Msa0732710 | Msa0777870 | 0.836381 | 9.673806e-57 | -8.615850e-47 |
| Msa0732710 | Msa0783160 | 0.804561 | 2.036091e-49 | -8.615850e-47 |
| Msa0732710 | Msa0787600 | 0.814934 | 1.196473e-51 | -8.615850e-47 |
| Msa0732710 | Msa0808010 | 0.805171 | 1.518407e-49 | -8.615850e-47 |
| Msa0732710 | Msa0808020 | 0.801711 | 7.914278e-49 | -8.615850e-47 |
| Msa0732710 | Msa0811270 | 0.835743 | 1.404690e-56 | -8.615850e-47 |
| Msa0732710 | Msa0825860 | 0.836191 | 1.081202e-56 | -8.615850e-47 |
| Msa0732710 | Msa0846330 | 0.807684 | 4.481835e-50 | -8.615850e-47 |
| Msa0732710 | Msa0846350 | 0.806512 | 7.934778e-50 | -8.615850e-47 |
| Msa0732710 | Msa0851390 | 0.889914 | 1.580636e-73 | -8.615850e-47 |
| Msa0732710 | Msa0865320 | 0.824356 | 8.436576e-54 | -8.615850e-47 |
| Msa0732710 | Msa0872230 | 0.801599 | 8.345220e-49 | -8.615850e-47 |
| Msa0732710 | Msa0885280 | 0.804061 | 2.587764e-49 | -8.615850e-47 |
| Msa0732710 | Msa0885290 | 0.811827 | 5.760849e-51 | -8.615850e-47 |
| Msa0732710 | Msa0888370 | 0.816055 | 6.736062e-52 | -8.615850e-47 |
| Msa0732710 | Msa0954910 | 0.820443 | 6.840468e-53 | -8.615850e-47 |
| Msa0732710 | Msa0989060 | 0.808025 | 3.792831e-50 | -8.615850e-47 |
| Msa0732710 | Msa1016280 | 0.823879 | 1.092196e-53 | -8.615850e-47 |
| Msa0732710 | Msa1025360 | 0.826422 | 2.737029e-54 | -8.615850e-47 |
| Msa0732710 | Msa1025370 | 0.813476 | 2.510290e-51 | -8.615850e-47 |
| Msa0732710 | Msa1044830 | 0.812198 | 4.782381e-51 | -8.615850e-47 |
| Msa0732710 | Msa1044840 | 0.834742 | 2.512973e-56 | -8.615850e-47 |
| Msa0732710 | Msa1060840 | 0.806071 | 9.830868e-50 | -8.615850e-47 |
| Msa0732710 | Msa1092990 | 0.859404 | 4.233052e-63 | -8.615850e-47 |
| Msa0732710 | Msa1100980 | 0.852691 | 3.909883e-61 | -8.615850e-47 |
| Msa0732710 | Msa1109440 | 0.820532 | 6.528039e-53 | -8.615850e-47 |
| Msa0732710 | Msa1135740 | 0.833228 | 6.014375e-56 | -8.615850e-47 |
| Msa0732710 | Msa1146110 | 0.833378 | 5.519203e-56 | -8.615850e-47 |
| Msa0732710 | Msa1173920 | 0.824038 | 1.002157e-53 | -8.615850e-47 |
| Msa0732710 | Msa1187940 | 0.843029 | 1.800761e-58 | -8.615850e-47 |
| Msa0732710 | Msa1187950 | 0.821289 | 4.369690e-53 | -8.615850e-47 |
| Msa0732710 | Msa1192640 | 0.827251 | 1.734326e-54 | -8.615850e-47 |
| Msa0732710 | Msa1230430 | 0.800440 | 1.439706e-48 | -8.615850e-47 |
| Msa0732710 | Msa1246880 | 0.818031 | 2.423199e-52 | -8.615850e-47 |
| Msa0732710 | Msa1269670 | 0.839760 | 1.306822e-57 | -8.615850e-47 |
| Msa0732710 | Msa1270230 | 0.858018 | 1.098486e-62 | -8.615850e-47 |
| Msa0732710 | Msa1270240 | 0.828686 | 7.829950e-55 | -8.615850e-47 |
| Msa0732710 | Msa1270270 | 0.850301 | 1.854840e-60 | -8.615850e-47 |
| Msa0732710 | Msa1283330 | 0.850714 | 1.420458e-60 | -8.615850e-47 |
| Msa0732710 | Msa1285930 | 0.833719 | 4.536844e-56 | -8.615850e-47 |
| Msa0732710 | Msa1287800 | 0.811676 | 6.213928e-51 | -8.615850e-47 |
| Msa0732710 | Msa1287810 | 0.834162 | 3.515134e-56 | -8.615850e-47 |
| Msa0732710 | Msa1297210 | 0.808215 | 3.454959e-50 | -8.615850e-47 |
| Msa0732710 | Msa1320300 | 0.803798 | 2.935602e-49 | -8.615850e-47 |
| Msa0732710 | Msa1340590 | 0.825199 | 5.339516e-54 | -8.615850e-47 |
| Msa0732710 | Msa1386330 | 0.808548 | 2.934482e-50 | -8.615850e-47 |
| Msa0732710 | Msa1397580 | 0.823482 | 1.352557e-53 | -8.615850e-47 |
| Msa0732710 | Msa1402790 | 0.803322 | 3.683661e-49 | -8.615850e-47 |
| Msa0732710 | Msa1404000 | 0.813523 | 2.451321e-51 | -8.615850e-47 |
| Msa0732710 | Msa1408780 | 0.804915 | 1.717364e-49 | -8.615850e-47 |
| Msa0732710 | Msa1415310 | 0.811594 | 6.474381e-51 | -8.615850e-47 |
| Msa0732710 | Msa1422180 | 0.820217 | 7.707732e-53 | -8.615850e-47 |
| Msa0732710 | Msa1451570 | 0.801129 | 1.041585e-48 | -8.615850e-47 |
| Msa0145750 | Msa0732710 | 0.800781 | 1.226544e-48 | -8.615850e-47 |
| Msa0153910 | Msa0732710 | 0.807240 | 5.567586e-50 | -8.615850e-47 |
| Msa0200000 | Msa0732710 | 0.812547 | 4.012310e-51 | -8.615850e-47 |
| Msa0227480 | Msa0732710 | 0.802222 | 6.216414e-49 | -8.615850e-47 |
| Msa0232850 | Msa0732710 | 0.827600 | 1.430826e-54 | -8.615850e-47 |
| Msa0365500 | Msa0732710 | 0.825223 | 5.271304e-54 | -8.615850e-47 |
| Msa0384800 | Msa0732710 | 0.812004 | 5.272712e-51 | -8.615850e-47 |
| Msa0414420 | Msa0732710 | 0.821475 | 3.958879e-53 | -8.615850e-47 |
| Msa0450000 | Msa0732710 | 0.800544 | 1.370976e-48 | -8.615850e-47 |
| Msa0451730 | Msa0732710 | 0.810332 | 1.214994e-50 | -8.615850e-47 |
| Msa0452900 | Msa0732710 | 0.844566 | 6.984092e-59 | -8.615850e-47 |
| Msa0453120 | Msa0732710 | 0.808769 | 2.631435e-50 | -8.615850e-47 |
| Msa0454910 | Msa0732710 | 0.802089 | 6.617859e-49 | -8.615850e-47 |
| Msa0267000 | Msa0732710 | 0.814753 | 1.312350e-51 | -8.615850e-47 |
| Msa0267010 | Msa0732710 | 0.827568 | 1.455708e-54 | -8.615850e-47 |
| Msa0270520 | Msa0732710 | 0.801467 | 8.879937e-49 | -8.615850e-47 |
| Msa0306460 | Msa0732710 | 0.801791 | 7.622858e-49 | -8.615850e-47 |
| Msa0342240 | Msa0732710 | 0.825470 | 4.606858e-54 | -8.615850e-47 |
| Msa0548060 | Msa0732710 | 0.806483 | 8.048564e-50 | -8.615850e-47 |
| Msa0564890 | Msa0732710 | 0.800307 | 1.532326e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0732710 | MtrunA17_Chr3g0132991 | 55.882 | 374 | 124 | 6 | 144 | 479 | 359 | 729 | 1.22e-120 | 382 |
| Msa0732710 | MtrunA17_Chr5g0427421 | 67.662 | 201 | 60 | 3 | 289 | 489 | 30 | 225 | 2.69e-83 | 268 |
| Msa0732710 | MtrunA17_Chr2g0279601 | 50.519 | 289 | 113 | 3 | 134 | 395 | 353 | 638 | 1.03e-82 | 280 |
| Msa0732710 | MtrunA17_Chr5g0427691 | 88.750 | 80 | 9 | 0 | 289 | 368 | 10 | 89 | 1.01e-43 | 151 |
| Msa0732710 | MtrunA17_Chr8g0365341 | 27.987 | 318 | 188 | 11 | 169 | 449 | 299 | 612 | 1.96e-31 | 130 |
| Msa0732710 | MtrunA17_Chr2g0295891 | 27.717 | 184 | 105 | 8 | 190 | 357 | 271 | 442 | 5.04e-15 | 78.2 |
| Msa0732710 | MtrunA17_Chr4g0067411 | 25.602 | 332 | 207 | 14 | 43 | 357 | 161 | 469 | 7.28e-15 | 77.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0732710 | AT1G09730.2 | 47.287 | 387 | 153 | 6 | 159 | 499 | 373 | 754 | 4.10e-96 | 316 |
| Msa0732710 | AT1G09730.1 | 47.287 | 387 | 153 | 6 | 159 | 499 | 405 | 786 | 8.68e-96 | 316 |
| Msa0732710 | AT4G33620.1 | 47.368 | 266 | 113 | 2 | 156 | 396 | 281 | 544 | 1.32e-71 | 246 |
| Msa0732710 | AT1G60220.1 | 29.084 | 251 | 144 | 8 | 170 | 392 | 332 | 576 | 3.24e-29 | 123 |
| Msa0732710 | AT1G10570.3 | 31.373 | 255 | 135 | 9 | 170 | 392 | 186 | 432 | 6.67e-29 | 120 |
| Msa0732710 | AT1G10570.1 | 31.373 | 255 | 135 | 9 | 170 | 392 | 317 | 563 | 3.52e-28 | 120 |
| Msa0732710 | AT1G10570.2 | 31.373 | 255 | 135 | 9 | 170 | 392 | 316 | 562 | 3.94e-28 | 119 |
| Msa0732710 | AT4G15880.1 | 29.070 | 172 | 99 | 6 | 190 | 348 | 298 | 459 | 9.62e-19 | 90.1 |
| Msa0732710 | AT4G00690.1 | 26.667 | 195 | 111 | 7 | 180 | 356 | 139 | 319 | 2.36e-14 | 75.5 |
| Msa0732710 | AT3G06910.1 | 27.119 | 177 | 97 | 8 | 190 | 348 | 310 | 472 | 9.91e-14 | 74.7 |
Find 126 sgRNAs with CRISPR-Local
Find 389 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTTTCCTCCTTCTCGGGTTT+TGG | 0.191189 | 5_1:-45389959 | Msa0732710:CDS |
| CATTTCAACATGTTCGTAAA+TGG | 0.204655 | 5_1:-45387001 | Msa0732710:CDS |
| CTTTCGAAAGCTGGCTGATA+TGG | 0.231272 | 5_1:-45387060 | Msa0732710:CDS |
| ATCTTACAATACTTGTAATA+TGG | 0.240983 | 5_1:-45384116 | Msa0732710:CDS |
| GGCGAAGTGGTTAATATTAA+TGG | 0.242841 | 5_1:-45386805 | Msa0732710:intron |
| AAATGTATTCCCTCGTAATA+TGG | 0.279291 | 5_1:-45388135 | Msa0732710:CDS |
| AGTTGGTGGTAACTTCAATT+TGG | 0.294760 | 5_1:-45388453 | Msa0732710:CDS |
| ACAGCATCTGGATCCCCTTT+TGG | 0.297980 | 5_1:+45387909 | None:intergenic |
| TCCCATGAGTTTCTCAGTTT+CGG | 0.301177 | 5_1:-45389895 | Msa0732710:intron |
| GTGTCATTGATGTATGTATT+TGG | 0.314227 | 5_1:+45387852 | None:intergenic |
| TTGCAGGAGTCTCTCACTTT+TGG | 0.319621 | 5_1:-45389599 | Msa0732710:intron |
| TACTTGTAATATGGTTCTTA+AGG | 0.339876 | 5_1:-45384107 | Msa0732710:CDS |
| ACTTACAAAGTTGGAACAAT+TGG | 0.340942 | 5_1:+45384518 | None:intergenic |
| TGGCATTAATTCATCCAGTT+TGG | 0.343326 | 5_1:-45388174 | Msa0732710:CDS |
| CACAAACTTGTCTATCCAAA+AGG | 0.356318 | 5_1:-45387924 | Msa0732710:CDS |
| GTTTGCAAATTATCAGTTGC+AGG | 0.359014 | 5_1:-45389615 | Msa0732710:CDS |
| TGAACCAGTTTCCTCCTTCT+CGG | 0.360699 | 5_1:-45389966 | Msa0732710:CDS |
| GAGGCATCGACTTCCCATTC+TGG | 0.377856 | 5_1:-45384160 | Msa0732710:CDS |
| GCAGATTTGCCGTCACAATC+AGG | 0.387491 | 5_1:+45387023 | None:intergenic |
| TGCAATATCAGACTCCAAAC+TGG | 0.388848 | 5_1:+45388160 | None:intergenic |
| TTACTTAGCGTAACAGCATC+TGG | 0.392707 | 5_1:+45387897 | None:intergenic |
| TAAGCAAGACATACCTCAAC+GGG | 0.393152 | 5_1:+45384979 | None:intergenic |
| CTCAGAGGGTTGAAATCAAA+TGG | 0.405785 | 5_1:+45384546 | None:intergenic |
| ATTTGAAGAGGCAATATCAT+TGG | 0.408710 | 5_1:+45389924 | None:intergenic |
| ACAGTTATTTGTCTGAAGAA+TGG | 0.412320 | 5_1:-45385068 | Msa0732710:intron |
| CCGTACGTTAATATTTGAAC+TGG | 0.421646 | 5_1:-45384296 | Msa0732710:CDS |
| TGCTGGTTATCACCATCGTC+AGG | 0.422984 | 5_1:+45384241 | None:intergenic |
| CAGAATATATTGACAACAAC+AGG | 0.426234 | 5_1:-45384213 | Msa0732710:CDS |
| GAGAGGAAGAATGATACATA+TGG | 0.426271 | 5_1:-45385042 | Msa0732710:CDS |
| TTCTATTCCCTGGCCAGAAT+GGG | 0.426921 | 5_1:+45384147 | None:intergenic |
| GAACCAGTTTCCTCCTTCTC+GGG | 0.432033 | 5_1:-45389965 | Msa0732710:CDS |
| CTTCAATTTGGAGACCGATC+TGG | 0.445381 | 5_1:-45388441 | Msa0732710:CDS |
| GAAGTTCCCGATGCGGCTCT+TGG | 0.452675 | 5_1:+45384073 | None:intergenic |
| GACGAGGTCATTGATGTTGA+TGG | 0.454665 | 5_1:-45388476 | Msa0732710:CDS |
| AAACCCGAGAAGGAGGAAAC+TGG | 0.454822 | 5_1:+45389962 | None:intergenic |
| TTTCTATTCCCTGGCCAGAA+TGG | 0.454940 | 5_1:+45384146 | None:intergenic |
| ACAAACTTGTCTATCCAAAA+GGG | 0.462924 | 5_1:-45387923 | Msa0732710:CDS |
| TTAATAGTGATTTGTTATCC+TGG | 0.465013 | 5_1:-45386826 | Msa0732710:CDS |
| GCCATGTTGGCAGACATCAC+TGG | 0.466901 | 5_1:-45386852 | Msa0732710:intron |
| GTTACTTACTTGAAGTTCAC+AGG | 0.468600 | 5_1:+45386936 | None:intergenic |
| ATCGACTTCCCATTCTGGCC+AGG | 0.472305 | 5_1:-45384155 | Msa0732710:CDS |
| GGATAGACAAGTTTGTGAAA+AGG | 0.479008 | 5_1:+45387930 | None:intergenic |
| ATGGAAACATTTCTATTCCC+TGG | 0.483194 | 5_1:+45384137 | None:intergenic |
| TACGTTAATATTTGAACTGG+TGG | 0.485813 | 5_1:-45384293 | Msa0732710:CDS |
| GAGACCGATCTGGACACGTT+GGG | 0.487778 | 5_1:-45388431 | Msa0732710:CDS |
| GTGAAAACCACTTACAAAGT+TGG | 0.496585 | 5_1:+45384509 | None:intergenic |
| CAATATATTCTGAGCAGTGC+TGG | 0.499295 | 5_1:+45384224 | None:intergenic |
| ATGTTCGCTGGTCAAAAGAT+TGG | 0.500143 | 5_1:+45383975 | None:intergenic |
| TGGAAGTAGCTTGTTAGTCT+AGG | 0.503469 | 5_1:+45388086 | None:intergenic |
| TTTGAACCAAGAGCCGCATC+GGG | 0.506018 | 5_1:-45384079 | Msa0732710:CDS |
| TAAGATAGAAGAAAAGCAAA+AGG | 0.509758 | 5_1:-45387111 | Msa0732710:CDS |
| ATGATTGCTGGTCAAAAGAT+TGG | 0.512316 | 5_1:+45384038 | None:intergenic |
| GTCATTGATGTTGATGGAGT+TGG | 0.516986 | 5_1:-45388470 | Msa0732710:CDS |
| TGTGGACTGGTTTCCACCTA+CGG | 0.519375 | 5_1:-45384344 | Msa0732710:CDS |
| ATGTTCGCAGGTCAAAAGAT+TGG | 0.522412 | 5_1:+45383912 | None:intergenic |
| AAGAGGCAATATCATTGGAA+TGG | 0.526389 | 5_1:+45389929 | None:intergenic |
| TTAATATTAACCACTTCGCC+AGG | 0.527512 | 5_1:+45386808 | None:intergenic |
| GAAAACCATGGTTCACATGA+AGG | 0.530457 | 5_1:-45384271 | Msa0732710:CDS |
| ATCTTCGTTACAGTCAAGTC+AGG | 0.533835 | 5_1:-45388336 | Msa0732710:intron |
| ATTGACAACAACAGGATTGG+TGG | 0.535711 | 5_1:-45384205 | Msa0732710:CDS |
| TCCTTGACAGGTACCACAGC+AGG | 0.535734 | 5_1:-45384631 | Msa0732710:intron |
| TACCGAAACTGAGAAACTCA+TGG | 0.541502 | 5_1:+45389893 | None:intergenic |
| TATATTGACAACAACAGGAT+TGG | 0.544673 | 5_1:-45384208 | Msa0732710:CDS |
| AACAATTGGTTAGTCTCAGA+GGG | 0.551951 | 5_1:+45384532 | None:intergenic |
| ACCGAAACTGAGAAACTCAT+GGG | 0.552514 | 5_1:+45389894 | None:intergenic |
| CAGATTTGCCGTCACAATCA+GGG | 0.553501 | 5_1:+45387024 | None:intergenic |
| TGTCTGAAGAATGGAAAGAG+AGG | 0.554930 | 5_1:-45385059 | Msa0732710:CDS |
| TCATTATCTAGAGCTCTTCG+TGG | 0.558865 | 5_1:-45384577 | Msa0732710:CDS |
| ATGATCGCTGGTCAAAAGAC+TGG | 0.559134 | 5_1:+45383723 | None:intergenic |
| TGTTCGTAAATGGACAAGAA+AGG | 0.560937 | 5_1:-45386991 | Msa0732710:CDS |
| ATTGATGTTGATGGAGTTGG+TGG | 0.561060 | 5_1:-45388467 | Msa0732710:CDS |
| CAGGAAAACTCATTTGATTG+TGG | 0.562524 | 5_1:-45384612 | Msa0732710:CDS |
| AATGATCACTGGTCAAAAGA+GGG | 0.564167 | 5_1:+45383533 | None:intergenic |
| GCTGGAATCTCTCAATTCGA+TGG | 0.566606 | 5_1:-45389657 | Msa0732710:CDS |
| TAGAAGAAAAGCAAAAGGCT+AGG | 0.566794 | 5_1:-45387106 | Msa0732710:CDS |
| TCGACTTCCCATTCTGGCCA+GGG | 0.568090 | 5_1:-45384154 | Msa0732710:CDS |
| AATGATCGCTGGTCAAAAGA+GGG | 0.570888 | 5_1:+45383848 | None:intergenic |
| TAATGATCGCTGGTCAAAAG+AGG | 0.573409 | 5_1:+45383847 | None:intergenic |
| ATATTACAAGTATTGTAAGA+TGG | 0.575254 | 5_1:+45384118 | None:intergenic |
| TAATGATCACTGGTCAAAAG+AGG | 0.576078 | 5_1:+45383532 | None:intergenic |
| ATTCCCTCGTAATATGGATG+TGG | 0.583200 | 5_1:-45388129 | Msa0732710:CDS |
| GTCTGAAAGACCTTGTGCAA+AGG | 0.583698 | 5_1:-45385170 | Msa0732710:intron |
| CCAGTTCAAATATTAACGTA+CGG | 0.591408 | 5_1:+45384296 | None:intergenic |
| AGGAGGAAACTGGTTCATCA+TGG | 0.591977 | 5_1:+45389972 | None:intergenic |
| GCTTCCCAACGTGTCCAGAT+CGG | 0.592976 | 5_1:+45388427 | None:intergenic |
| TTGCCGTCACAATCAGGGTG+GGG | 0.594456 | 5_1:+45387029 | None:intergenic |
| GATTCCAAAACCCGAGAAGG+AGG | 0.598277 | 5_1:+45389955 | None:intergenic |
| CCTTCCACATCCATATTACG+AGG | 0.611135 | 5_1:+45388125 | None:intergenic |
| ATGATCGTTGGTCAAAAGAG+TGG | 0.611649 | 5_1:+45383660 | None:intergenic |
| GCTGGTTATCACCATCGTCA+GGG | 0.613048 | 5_1:+45384242 | None:intergenic |
| TTTGCCGTCACAATCAGGGT+GGG | 0.613309 | 5_1:+45387028 | None:intergenic |
| CCTCGTAATATGGATGTGGA+AGG | 0.615697 | 5_1:-45388125 | Msa0732710:CDS |
| TAGATGATGATAATGTTCGC+AGG | 0.617198 | 5_1:+45383900 | None:intergenic |
| TTTGAACTGGTGGAAAACCA+TGG | 0.618826 | 5_1:-45384283 | Msa0732710:CDS |
| GAACAATTGGTTAGTCTCAG+AGG | 0.620039 | 5_1:+45384531 | None:intergenic |
| AGAGATTCCAAAACCCGAGA+AGG | 0.622460 | 5_1:+45389952 | None:intergenic |
| GGAGACCGATCTGGACACGT+TGG | 0.628953 | 5_1:-45388432 | Msa0732710:CDS |
| TTGAGATAAGCATCCGTAGG+TGG | 0.629538 | 5_1:+45384331 | None:intergenic |
| AAAAGCCTTCATGTGAACCA+TGG | 0.631459 | 5_1:+45384266 | None:intergenic |
| TAGATGATGATAATGATCGC+TGG | 0.636105 | 5_1:+45383585 | None:intergenic |
| TAGATGATGATAATGATCGC+TGG | 0.636105 | 5_1:+45383711 | None:intergenic |
| TAGATGATGATAATGATCGC+TGG | 0.636105 | 5_1:+45383774 | None:intergenic |
| TAGATGATGATAATGATCGC+TGG | 0.636105 | 5_1:+45383837 | None:intergenic |
| CGCTTGAGATAAGCATCCGT+AGG | 0.636755 | 5_1:+45384328 | None:intergenic |
| AATCCCCACCCTGATTGTGA+CGG | 0.637758 | 5_1:-45387032 | Msa0732710:CDS |
| CAAACTTGTCTATCCAAAAG+GGG | 0.646120 | 5_1:-45387922 | Msa0732710:CDS |
| TAGATGATGATAATGATCGT+TGG | 0.649359 | 5_1:+45383648 | None:intergenic |
| TAATCAAGAATCTTGATGAG+AGG | 0.650876 | 5_1:+45385013 | None:intergenic |
| ATGATCGCTGGTCAAAAGAG+TGG | 0.651671 | 5_1:+45383597 | None:intergenic |
| ATGATCGCTGGTCAAAAGAG+TGG | 0.651671 | 5_1:+45383786 | None:intergenic |
| CTGGTTATCACCATCGTCAG+GGG | 0.651767 | 5_1:+45384243 | None:intergenic |
| GATTTGTTATCCTGGCGAAG+TGG | 0.654014 | 5_1:-45386818 | Msa0732710:CDS |
| TTAAGAAATACCTTTGCACA+AGG | 0.654793 | 5_1:+45385160 | None:intergenic |
| TAGATGATGATAATGTTCGC+TGG | 0.655576 | 5_1:+45383963 | None:intergenic |
| ATGGGATTGAGAATTTGAAG+AGG | 0.659303 | 5_1:+45389912 | None:intergenic |
| GTGTCATTTATTCAACGTGG+AGG | 0.663555 | 5_1:-45384179 | Msa0732710:CDS |
| CTTCCACATCCATATTACGA+GGG | 0.670246 | 5_1:+45388126 | None:intergenic |
| TCTCAGTGAAGTTCCCGATG+CGG | 0.671660 | 5_1:+45384066 | None:intergenic |
| ATGATCACTGGTCAAAAGAG+GGG | 0.676357 | 5_1:+45383534 | None:intergenic |
| ATTTGCCGTCACAATCAGGG+TGG | 0.676872 | 5_1:+45387027 | None:intergenic |
| GTAAGCAAGACATACCTCAA+CGG | 0.678921 | 5_1:+45384978 | None:intergenic |
| ATGATCGCTGGTCAAAAGAG+GGG | 0.693857 | 5_1:+45383849 | None:intergenic |
| TCAGTGTCATTTATTCAACG+TGG | 0.715574 | 5_1:-45384182 | Msa0732710:CDS |
| GCTGTGAAACAAGATACTAG+TGG | 0.751401 | 5_1:-45388365 | Msa0732710:CDS |
| GTGAAACAAGATACTAGTGG+TGG | 0.802443 | 5_1:-45388362 | Msa0732710:CDS |
| AAGCAAGACATACCTCAACG+GGG | 0.831878 | 5_1:+45384980 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATATATATATATATATTTTT+AGG | - | chr5_1:45387048-45387067 | Msa0732710:CDS | 0.0% |
| !!! | TATATATATATATATTTTTA+GGG | - | chr5_1:45387049-45387068 | Msa0732710:CDS | 0.0% |
| !! | AACAAAAAATAAAAAATTTC+GGG | + | chr5_1:45383964-45383983 | None:intergenic | 10.0% |
| !! | TTAAAAATTACAAATTGATT+TGG | + | chr5_1:45384758-45384777 | None:intergenic | 10.0% |
| !!! | TAAGTAAATTTTTTTTTGTA+GGG | + | chr5_1:45387152-45387171 | None:intergenic | 10.0% |
| !!! | ATAAGTAAATTTTTTTTTGT+AGG | + | chr5_1:45387153-45387172 | None:intergenic | 10.0% |
| !! | TTAAAAAATTTAAGAGTTTA+AGG | + | chr5_1:45387214-45387233 | None:intergenic | 10.0% |
| !! | AAATATAAGTAACAAAAATA+TGG | - | chr5_1:45387345-45387364 | Msa0732710:intron | 10.0% |
| !! | TTGTTATAAAACAATAAATA+AGG | - | chr5_1:45387783-45387802 | Msa0732710:intron | 10.0% |
| !! | TTAAGTTATATTATTTCAAT+TGG | - | chr5_1:45389067-45389086 | Msa0732710:intron | 10.0% |
| !!! | AAACTAAAACTTTCTTTTTT+TGG | - | chr5_1:45384617-45384636 | Msa0732710:CDS | 15.0% |
| !! | TATAATTAACTAAAATCAGA+AGG | - | chr5_1:45384723-45384742 | Msa0732710:intron | 15.0% |
| !!! | TATATGCATTTATTTTTGTA+TGG | + | chr5_1:45384887-45384906 | None:intergenic | 15.0% |
| !!! | AAAAATCTTTTTGAAATCAA+TGG | + | chr5_1:45385111-45385130 | None:intergenic | 15.0% |
| !! | AAAAAATATTTACAACGTTA+TGG | - | chr5_1:45385457-45385476 | Msa0732710:intron | 15.0% |
| !! | AAGTTATTAACATTACAATT+TGG | + | chr5_1:45386015-45386034 | None:intergenic | 15.0% |
| !! | ATTGTAATGTTAATAACTTA+TGG | - | chr5_1:45386016-45386035 | Msa0732710:intron | 15.0% |
| !! | TTGTAATGTTAATAACTTAT+GGG | - | chr5_1:45386017-45386036 | Msa0732710:intron | 15.0% |
| !! | ATCTACTGTTAATAAAATAA+AGG | + | chr5_1:45386163-45386182 | None:intergenic | 15.0% |
| !!! | AAAGTCTTATTTTATCATTT+TGG | + | chr5_1:45386233-45386252 | None:intergenic | 15.0% |
| !! | AATATAAACAAACAGTTATA+TGG | - | chr5_1:45386286-45386305 | Msa0732710:intron | 15.0% |
| !! | ATATTATAACTACTGAAAAA+TGG | - | chr5_1:45386325-45386344 | Msa0732710:intron | 15.0% |
| !! | TATTATAACTACTGAAAAAT+GGG | - | chr5_1:45386326-45386345 | Msa0732710:intron | 15.0% |
| !! | AAAGCTATTAAAATTAAGTA+AGG | + | chr5_1:45387123-45387142 | None:intergenic | 15.0% |
| !!! | AAACAAAATTTATTTTAGCA+GGG | + | chr5_1:45387185-45387204 | None:intergenic | 15.0% |
| !!! | TAAACAAAATTTATTTTAGC+AGG | + | chr5_1:45387186-45387205 | None:intergenic | 15.0% |
| !!! | AATTTTTGCGATATTTTTTT+CGG | - | chr5_1:45387380-45387399 | Msa0732710:intron | 15.0% |
| !! | ATATATTTATAGTTTGAACT+AGG | + | chr5_1:45387628-45387647 | None:intergenic | 15.0% |
| !! | ATTTATAGTACATAAATTCT+TGG | + | chr5_1:45387676-45387695 | None:intergenic | 15.0% |
| !!! | CTTTTTTAACATATAAGATA+AGG | + | chr5_1:45387738-45387757 | None:intergenic | 15.0% |
| !!! | TCAAAATCAAGAATTTTATT+TGG | + | chr5_1:45387932-45387951 | None:intergenic | 15.0% |
| !! | TTGAAAGAAAGAAAAATATT+GGG | - | chr5_1:45388181-45388200 | Msa0732710:CDS | 15.0% |
| !!! | AACAATTTTGCAATAAAAAT+AGG | + | chr5_1:45388692-45388711 | None:intergenic | 15.0% |
| !! | AAAAAACTCAAAAACTAACA+CGG | + | chr5_1:45383999-45384018 | None:intergenic | 20.0% |
| !! | TTGATAAAGATTCAAATAAG+AGG | - | chr5_1:45384169-45384188 | Msa0732710:CDS | 20.0% |
| !! | TCATCATTAAAAGAATCAAT+TGG | - | chr5_1:45384232-45384251 | Msa0732710:CDS | 20.0% |
| !! | TAATAATCTACTCAAAATTG+TGG | - | chr5_1:45384272-45384291 | Msa0732710:CDS | 20.0% |
| !!! | TACTATTTTTCTGTTTAAGA+TGG | - | chr5_1:45384385-45384404 | Msa0732710:intron | 20.0% |
| !!! | ACTATTTTTCTGTTTAAGAT+GGG | - | chr5_1:45384386-45384405 | Msa0732710:intron | 20.0% |
| !!! | TCTTGAGTTGAAAAAATTTA+AGG | - | chr5_1:45384415-45384434 | Msa0732710:intron | 20.0% |
| !!! | CTTGAGTTGAAAAAATTTAA+GGG | - | chr5_1:45384416-45384435 | Msa0732710:intron | 20.0% |
| !!! | TGTTTGGAATCATTAAAATA+AGG | - | chr5_1:45384485-45384504 | Msa0732710:intron | 20.0% |
| !!! | GTTTGGAATCATTAAAATAA+GGG | - | chr5_1:45384486-45384505 | Msa0732710:intron | 20.0% |
| !! | CATATATAGTAATAATGCAT+TGG | - | chr5_1:45384548-45384567 | Msa0732710:CDS | 20.0% |
| !!! | TGTCCAATCAATTATTTTAA+GGG | + | chr5_1:45384682-45384701 | None:intergenic | 20.0% |
| !!! | TTGTCCAATCAATTATTTTA+AGG | + | chr5_1:45384683-45384702 | None:intergenic | 20.0% |
| !! | TTACAAATAAAGTTTACCTT+AGG | + | chr5_1:45385239-45385258 | None:intergenic | 20.0% |
| !! | TAGAGATTTAGTTATATTGT+AGG | - | chr5_1:45385274-45385293 | Msa0732710:intron | 20.0% |
| !!! | TATTTTTTTGTACTTACTCT+TGG | + | chr5_1:45385445-45385464 | None:intergenic | 20.0% |
| !! | CAATAACAATATTAGAACTA+AGG | + | chr5_1:45386092-45386111 | None:intergenic | 20.0% |
| !! | AAAATAAGACTTTCAATATC+AGG | - | chr5_1:45386240-45386259 | Msa0732710:intron | 20.0% |
| !!! | CTGTTTAAAAATCTCAATTT+TGG | - | chr5_1:45386359-45386378 | Msa0732710:intron | 20.0% |
| !! | AGAAAAAACTATTGAAAAAG+TGG | + | chr5_1:45386430-45386449 | None:intergenic | 20.0% |
| !! | AATATCAACACAAAACAAAA+AGG | - | chr5_1:45386906-45386925 | Msa0732710:intron | 20.0% |
| !!! | TTTAGGGTTAAATATGTTTT+TGG | - | chr5_1:45387065-45387084 | Msa0732710:CDS | 20.0% |
| !!! | GTTTTTCAACAATTTTTTAC+AGG | + | chr5_1:45387434-45387453 | None:intergenic | 20.0% |
| !! | AAACAAATTTAGATTGAGTA+AGG | - | chr5_1:45387475-45387494 | Msa0732710:intron | 20.0% |
| !!! | AAATGGGTTAATTATGTTTT+TGG | + | chr5_1:45387594-45387613 | None:intergenic | 20.0% |
| !! | TTTAACATATAAGATAAGGT+TGG | + | chr5_1:45387734-45387753 | None:intergenic | 20.0% |
| !! | CTTGAAAGAAAGAAAAATAT+TGG | - | chr5_1:45388180-45388199 | Msa0732710:CDS | 20.0% |
| !! | TGAAAGAAAGAAAAATATTG+GGG | - | chr5_1:45388182-45388201 | Msa0732710:CDS | 20.0% |
| !! | CTTAAAAAATATATATGGCT+AGG | + | chr5_1:45389052-45389071 | None:intergenic | 20.0% |
| !!! | ATATTACAAGTATTGTAAGA+TGG | + | chr5_1:45389393-45389412 | None:intergenic | 20.0% |
| !! | ATCTTACAATACTTGTAATA+TGG | - | chr5_1:45389392-45389411 | Msa0732710:intron | 20.0% |
| ! | CAAAACACAAAAAAATCACA+AGG | + | chr5_1:45383713-45383732 | None:intergenic | 25.0% |
| ! | AACATCAGTAAATCAACAAT+AGG | + | chr5_1:45383793-45383812 | None:intergenic | 25.0% |
| !! | ATGATCAATGTTTTCAATCA+TGG | - | chr5_1:45383829-45383848 | Msa0732710:CDS | 25.0% |
| !!! | CTGAGTTGATAAAATTGAAA+TGG | - | chr5_1:45384124-45384143 | Msa0732710:CDS | 25.0% |
| ! | TGTCAATGTAACATTAGATT+TGG | - | chr5_1:45384346-45384365 | Msa0732710:CDS | 25.0% |
| ! | CAACCCTTAAAATAATTGAT+TGG | - | chr5_1:45384676-45384695 | Msa0732710:intron | 25.0% |
| ! | TCAAACTGAAATCTTCAATT+AGG | + | chr5_1:45384785-45384804 | None:intergenic | 25.0% |
| !! | CAAAAAGATTTTTGATGAGT+TGG | - | chr5_1:45385118-45385137 | Msa0732710:intron | 25.0% |
| ! | ATTTGTAAGTTTACATCCTA+AGG | - | chr5_1:45385251-45385270 | Msa0732710:intron | 25.0% |
| ! | TATAACTAAATCTCTACCTT+AGG | + | chr5_1:45385270-45385289 | None:intergenic | 25.0% |
| !! | TTATACAGAGTTCTCTTTTT+GGG | - | chr5_1:45385480-45385499 | Msa0732710:intron | 25.0% |
| ! | TCTAGGCTTAATTAATGATT+TGG | - | chr5_1:45385768-45385787 | Msa0732710:intron | 25.0% |
| ! | GTAACCAACAAATAACTTAA+GGG | + | chr5_1:45386048-45386067 | None:intergenic | 25.0% |
| ! | TGTAACCAACAAATAACTTA+AGG | + | chr5_1:45386047-45386066 | None:intergenic | 25.0% |
| ! | GCTAACATATACTAACTTAA+GGG | + | chr5_1:45385837-45385856 | None:intergenic | 25.0% |
| ! | TTTGACAGTAGAGATTTATT+TGG | - | chr5_1:45385965-45385984 | Msa0732710:intron | 25.0% |
| ! | TGTAACCAACAAATAACTTA+AGG | - | chr5_1:45386047-45386066 | Msa0732710:intron | 25.0% |
| ! | GTAACCAACAAATAACTTAA+GGG | - | chr5_1:45386048-45386067 | Msa0732710:intron | 25.0% |
| !! | AATATTGTTATTGTGAACCT+TGG | - | chr5_1:45386099-45386118 | Msa0732710:intron | 25.0% |
| ! | TAAGATAGAAGAAAAGCAAA+AGG | - | chr5_1:45386397-45386416 | Msa0732710:intron | 25.0% |
| !! | TTCTGATTGGAATTCAATTT+TGG | - | chr5_1:45386634-45386653 | Msa0732710:intron | 25.0% |
| !!! | TTAATAGTGATTTGTTATCC+TGG | - | chr5_1:45386682-45386701 | Msa0732710:intron | 25.0% |
| ! | AATCTTTGCCCAAAAAATTA+GGG | - | chr5_1:45386807-45386826 | Msa0732710:CDS | 25.0% |
| !! | TAGAAGGTCACAATTTTATA+GGG | + | chr5_1:45387092-45387111 | None:intergenic | 25.0% |
| !! | TTAGAAGGTCACAATTTTAT+AGG | + | chr5_1:45387093-45387112 | None:intergenic | 25.0% |
| ! | CAAGTTTATAACACTATGAA+AGG | - | chr5_1:45387248-45387267 | Msa0732710:intron | 25.0% |
| ! | GTGTTAAGAACGTTATTAAA+AGG | + | chr5_1:45387410-45387429 | None:intergenic | 25.0% |
| ! | CTAGGTCATGATAAAAAAAT+GGG | + | chr5_1:45387610-45387629 | None:intergenic | 25.0% |
| ! | ACTAGGTCATGATAAAAAAA+TGG | + | chr5_1:45387611-45387630 | None:intergenic | 25.0% |
| !! | TTCTAATTTCATTAGCTTCT+AGG | + | chr5_1:45387833-45387852 | None:intergenic | 25.0% |
| ! | AGATTGAAATTAAGAAACCA+AGG | + | chr5_1:45387909-45387928 | None:intergenic | 25.0% |
| !! | CTTTTTATCATATCAGCTAT+CGG | + | chr5_1:45388065-45388084 | None:intergenic | 25.0% |
| ! | TAGCTGATATGATAAAAAGA+AGG | - | chr5_1:45388066-45388085 | Msa0732710:intron | 25.0% |
| ! | GAAAGAAAGAAAAATATTGG+GGG | - | chr5_1:45388183-45388202 | Msa0732710:CDS | 25.0% |
| ! | AAAGAAAGAAAAATATTGGG+GGG | - | chr5_1:45388184-45388203 | Msa0732710:CDS | 25.0% |
| ! | TGTCATAATAGTTGACAAAA+TGG | + | chr5_1:45388423-45388442 | None:intergenic | 25.0% |
| ! | TTTCTTATTGCTCAATGAAA+TGG | - | chr5_1:45388605-45388624 | Msa0732710:intron | 25.0% |
| ! | CAAAGTATAGGCTAAATAAT+GGG | + | chr5_1:45388742-45388761 | None:intergenic | 25.0% |
| ! | ACAAAGTATAGGCTAAATAA+TGG | + | chr5_1:45388743-45388762 | None:intergenic | 25.0% |
| ! | AGAAAAATTCAACATATGTC+AGG | + | chr5_1:45389137-45389156 | None:intergenic | 25.0% |
| ! | TACTTGTAATATGGTTCTTA+AGG | - | chr5_1:45389401-45389420 | Msa0732710:intron | 25.0% |
| ATTTGAAGAGGCAATATCAT+TGG | + | chr5_1:45383587-45383606 | None:intergenic | 30.0% | |
| AAATCAACAATAGGATCATC+AGG | + | chr5_1:45383784-45383803 | None:intergenic | 30.0% | |
| !!! | CAAGCACACATTTTTTTTCA+AGG | + | chr5_1:45384152-45384171 | None:intergenic | 30.0% |
| TGATTCCAAATACAATGCTA+CGG | + | chr5_1:45384215-45384234 | None:intergenic | 30.0% | |
| GAATCAATTGGAATTTGATG+TGG | - | chr5_1:45384244-45384263 | Msa0732710:CDS | 30.0% | |
| AATGTAAGAGGAATTGTGTT+TGG | - | chr5_1:45384469-45384488 | Msa0732710:intron | 30.0% | |
| TTGTGAAGTCAACTCTTTAA+AGG | - | chr5_1:45384574-45384593 | Msa0732710:CDS | 30.0% | |
| !! | ATTTTAAGGGTTGTGTTAAC+CGG | + | chr5_1:45384669-45384688 | None:intergenic | 30.0% |
| AGAAATGAATTAGTGACTAG+TGG | - | chr5_1:45384807-45384826 | Msa0732710:intron | 30.0% | |
| GGTTCATATCTTTCAACTTA+TGG | - | chr5_1:45384828-45384847 | Msa0732710:intron | 30.0% | |
| ! | GAATTTGAAGTACTAAAACG+TGG | + | chr5_1:45384985-45385004 | None:intergenic | 30.0% |
| AGGTATATTATGTCCCTTTA+GGG | - | chr5_1:45385192-45385211 | Msa0732710:intron | 30.0% | |
| ATTTGTGAGTTTACATCCTA+AGG | - | chr5_1:45385220-45385239 | Msa0732710:intron | 30.0% | |
| ! | TATGTCATTCTTTTTGCAGA+CGG | - | chr5_1:45385304-45385323 | Msa0732710:intron | 30.0% |
| AAATGTATTCCCTCGTAATA+TGG | - | chr5_1:45385373-45385392 | Msa0732710:intron | 30.0% | |
| ! | GTTATACAGAGTTCTCTTTT+TGG | - | chr5_1:45385479-45385498 | Msa0732710:intron | 30.0% |
| TCCAAAATGAAAACATTGTG+TGG | - | chr5_1:45385513-45385532 | Msa0732710:intron | 30.0% | |
| ! | ACCACACAATGTTTTCATTT+TGG | + | chr5_1:45385517-45385536 | None:intergenic | 30.0% |
| AAAATGAAAACATTGTGTGG+TGG | - | chr5_1:45385516-45385535 | Msa0732710:intron | 30.0% | |
| ACAAACTTGTCTATCCAAAA+GGG | - | chr5_1:45385585-45385604 | Msa0732710:intron | 30.0% | |
| ! | GTGTCATTGATGTATGTATT+TGG | + | chr5_1:45385659-45385678 | None:intergenic | 30.0% |
| GTTACATTAACGTTACCATT+TGG | - | chr5_1:45385810-45385829 | Msa0732710:intron | 30.0% | |
| GGCTAACATATACTAACTTA+AGG | + | chr5_1:45385838-45385857 | None:intergenic | 30.0% | |
| ! | CTTTTGCCAAAACGTTAAAT+AGG | - | chr5_1:45385879-45385898 | Msa0732710:intron | 30.0% |
| GTAGAGATTTATTTGGTTGA+CGG | - | chr5_1:45385972-45385991 | Msa0732710:intron | 30.0% | |
| TTGACGGAAGATAACTTAAA+GGG | - | chr5_1:45385988-45386007 | Msa0732710:intron | 30.0% | |
| CTAAGGCTTAATTAATGATG+TGG | + | chr5_1:45386075-45386094 | None:intergenic | 30.0% | |
| !!! | TAGTTTTTTCTTTCGAAAGC+TGG | - | chr5_1:45386439-45386458 | Msa0732710:intron | 30.0% |
| CATTTCAACATGTTCGTAAA+TGG | - | chr5_1:45386507-45386526 | Msa0732710:intron | 30.0% | |
| ! | ATCTGTATTGATGTTCTGAT+TGG | - | chr5_1:45386621-45386640 | Msa0732710:intron | 30.0% |
| AGATATTATGTGATGATCAG+TGG | - | chr5_1:45386782-45386801 | Msa0732710:intron | 30.0% | |
| GAATCTTTGCCCAAAAAATT+AGG | - | chr5_1:45386806-45386825 | Msa0732710:CDS | 30.0% | |
| ATCTTTGCCCAAAAAATTAG+GGG | - | chr5_1:45386808-45386827 | Msa0732710:CDS | 30.0% | |
| !!! | TATTGCTCCCCTAATTTTTT+GGG | + | chr5_1:45386818-45386837 | None:intergenic | 30.0% |
| !!! | TTATTGCTCCCCTAATTTTT+TGG | + | chr5_1:45386819-45386838 | None:intergenic | 30.0% |
| AAGTAAGGACTAAACTTAGA+AGG | + | chr5_1:45387108-45387127 | None:intergenic | 30.0% | |
| !!! | TTTTGCGATATTTTTTTCGG+AGG | - | chr5_1:45387383-45387402 | Msa0732710:intron | 30.0% |
| !!! | TGAGTGCAGAAATTTTTTGT+AGG | - | chr5_1:45387506-45387525 | Msa0732710:intron | 30.0% |
| !!! | GAGTGCAGAAATTTTTTGTA+GGG | - | chr5_1:45387507-45387526 | Msa0732710:intron | 30.0% |
| AAGTAAGGACTAAACTTACA+AGG | - | chr5_1:45387551-45387570 | Msa0732710:intron | 30.0% | |
| TGAAATTAAGAAACCAAGGA+TGG | + | chr5_1:45387905-45387924 | None:intergenic | 30.0% | |
| ATAAAAAGAAGGAGAGTTCA+AGG | - | chr5_1:45388077-45388096 | Msa0732710:intron | 30.0% | |
| GAATCCATATGCAATATACA+TGG | + | chr5_1:45388298-45388317 | None:intergenic | 30.0% | |
| ATTGCATATGGATTCTATCA+AGG | - | chr5_1:45388303-45388322 | Msa0732710:intron | 30.0% | |
| TTGCATATGGATTCTATCAA+GGG | - | chr5_1:45388304-45388323 | Msa0732710:intron | 30.0% | |
| TTAAGAAATACCTTTGCACA+AGG | + | chr5_1:45388351-45388370 | None:intergenic | 30.0% | |
| AGAGAAGGAAATTTAATGTG+TGG | + | chr5_1:45388382-45388401 | None:intergenic | 30.0% | |
| CTGATAAGTTAAAGAAGAGA+AGG | + | chr5_1:45388397-45388416 | None:intergenic | 30.0% | |
| ACAGTTATTTGTCTGAAGAA+TGG | - | chr5_1:45388440-45388459 | Msa0732710:CDS | 30.0% | |
| TAATCAAGAATCTTGATGAG+AGG | + | chr5_1:45388498-45388517 | None:intergenic | 30.0% | |
| !!! | TGGATTTCAGTTTTATTTGC+TGG | - | chr5_1:45388625-45388644 | Msa0732710:intron | 30.0% |
| ! | AAAATTGATTCCAAGTCACT+GGG | - | chr5_1:45388648-45388667 | Msa0732710:intron | 30.0% |
| TTCAAAAAGCGACAAAGTAT+AGG | + | chr5_1:45388754-45388773 | None:intergenic | 30.0% | |
| CTAGATAATGAAGCAAAAAG+AGG | + | chr5_1:45388922-45388941 | None:intergenic | 30.0% | |
| ACTTACAAAGTTGGAACAAT+TGG | + | chr5_1:45388993-45389012 | None:intergenic | 30.0% | |
| AATTGTTCCAACTTTGTAAG+TGG | - | chr5_1:45388992-45389011 | Msa0732710:intron | 30.0% | |
| ! | AACTTTGTAAGTGGTTTTCA+CGG | - | chr5_1:45389001-45389020 | Msa0732710:intron | 30.0% |
| ATGGCTAGGAACAAAATAAT+TGG | + | chr5_1:45389038-45389057 | None:intergenic | 30.0% | |
| GATTCATATGGTTCCTTATA+TGG | - | chr5_1:45389105-45389124 | Msa0732710:intron | 30.0% | |
| TGTCAGGTTAAATCCATATA+AGG | + | chr5_1:45389121-45389140 | None:intergenic | 30.0% | |
| !!! | TGAATTTTTCTAGCTCAATG+TGG | - | chr5_1:45389146-45389165 | Msa0732710:intron | 30.0% |
| CCAGTTCAAATATTAACGTA+CGG | + | chr5_1:45389215-45389234 | None:intergenic | 30.0% | |
| TACGTTAATATTTGAACTGG+TGG | - | chr5_1:45389215-45389234 | Msa0732710:intron | 30.0% | |
| CAGAATATATTGACAACAAC+AGG | - | chr5_1:45389295-45389314 | Msa0732710:intron | 30.0% | |
| TATATTGACAACAACAGGAT+TGG | - | chr5_1:45389300-45389319 | Msa0732710:intron | 30.0% | |
| ! | TAGATGATGATAATGATCGT+TGG | + | chr5_1:45389863-45389882 | None:intergenic | 30.0% |
| AAGAGGCAATATCATTGGAA+TGG | + | chr5_1:45383582-45383601 | None:intergenic | 35.0% | |
| ATGGGATTGAGAATTTGAAG+AGG | + | chr5_1:45383599-45383618 | None:intergenic | 35.0% | |
| ! | TCAATGTTTTCAATCATGGC+TGG | - | chr5_1:45383833-45383852 | Msa0732710:CDS | 35.0% |
| GTTTGCAAATTATCAGTTGC+AGG | - | chr5_1:45383893-45383912 | Msa0732710:CDS | 35.0% | |
| TGAAACCGTAGCATTGTATT+TGG | - | chr5_1:45384207-45384226 | Msa0732710:CDS | 35.0% | |
| ACATTGACATCTCTTGCTTA+GGG | + | chr5_1:45384335-45384354 | None:intergenic | 35.0% | |
| TACATTGACATCTCTTGCTT+AGG | + | chr5_1:45384336-45384355 | None:intergenic | 35.0% | |
| !!! | CAAGCTCACTTTTGTTTTCA+TGG | + | chr5_1:45384444-45384463 | None:intergenic | 35.0% |
| CATGAAAACAAAAGTGAGCT+TGG | - | chr5_1:45384442-45384461 | Msa0732710:intron | 35.0% | |
| CCTCGACAATAAAAATCAAG+AGG | + | chr5_1:45384931-45384950 | None:intergenic | 35.0% | |
| ! | CCTCTTGATTTTTATTGTCG+AGG | - | chr5_1:45384928-45384947 | Msa0732710:intron | 35.0% |
| !! | AGTTGGTGGTAACTTCAATT+TGG | - | chr5_1:45385055-45385074 | Msa0732710:CDS | 35.0% |
| CAGGTATATTATGTCCCTTT+AGG | - | chr5_1:45385191-45385210 | Msa0732710:intron | 35.0% | |
| TCACAAATTGAGACCCTAAA+GGG | + | chr5_1:45385208-45385227 | None:intergenic | 35.0% | |
| TGGCATTAATTCATCCAGTT+TGG | - | chr5_1:45385334-45385353 | Msa0732710:intron | 35.0% | |
| !! | TCATGTCTGAAACAGTTTTC+AGG | - | chr5_1:45385553-45385572 | Msa0732710:intron | 35.0% |
| GGATAGACAAGTTTGTGAAA+AGG | + | chr5_1:45385581-45385600 | None:intergenic | 35.0% | |
| CACAAACTTGTCTATCCAAA+AGG | - | chr5_1:45385584-45385603 | Msa0732710:intron | 35.0% | |
| CAAACTTGTCTATCCAAAAG+GGG | - | chr5_1:45385586-45385605 | Msa0732710:intron | 35.0% | |
| !! | CTTTGCTTGCATTTAGTTCT+AGG | - | chr5_1:45385751-45385770 | Msa0732710:intron | 35.0% |
| TGGTCCCTTAAGTTATTTGT+TGG | - | chr5_1:45385788-45385807 | Msa0732710:intron | 35.0% | |
| TACTAACTTAAGGGACCAAA+TGG | + | chr5_1:45385828-45385847 | None:intergenic | 35.0% | |
| ! | ACTGATGGTGAGGATTTATT+TGG | + | chr5_1:45385859-45385878 | None:intergenic | 35.0% |
| ! | CATGTGCCTATTTAACGTTT+TGG | + | chr5_1:45385888-45385907 | None:intergenic | 35.0% |
| GTTAAATAGGCACATGTGAA+CGG | - | chr5_1:45385892-45385911 | Msa0732710:intron | 35.0% | |
| GTTGACGGAAGATAACTTAA+AGG | - | chr5_1:45385987-45386006 | Msa0732710:intron | 35.0% | |
| TGGTCCCTTAAGTTATTTGT+TGG | + | chr5_1:45385788-45385807 | None:intergenic | 35.0% | |
| TAGAAGAAAAGCAAAAGGCT+AGG | - | chr5_1:45386402-45386421 | Msa0732710:intron | 35.0% | |
| TGTTCGTAAATGGACAAGAA+AGG | - | chr5_1:45386517-45386536 | Msa0732710:intron | 35.0% | |
| GTTACTTACTTGAAGTTCAC+AGG | + | chr5_1:45386575-45386594 | None:intergenic | 35.0% | |
| !! | GAATTCAATTTTGGCCATGT+TGG | - | chr5_1:45386643-45386662 | Msa0732710:intron | 35.0% |
| TTAATATTAACCACTTCGCC+AGG | + | chr5_1:45386703-45386722 | None:intergenic | 35.0% | |
| GGCGAAGTGGTTAATATTAA+TGG | - | chr5_1:45386703-45386722 | Msa0732710:intron | 35.0% | |
| ! | TCACTACACACCTTATTTAC+AGG | + | chr5_1:45386999-45387018 | None:intergenic | 35.0% |
| ! | TTACAAGGTCGCAATTTTGT+AGG | - | chr5_1:45387566-45387585 | Msa0732710:intron | 35.0% |
| ! | TACAAGGTCGCAATTTTGTA+GGG | - | chr5_1:45387567-45387586 | Msa0732710:intron | 35.0% |
| TATCTGTGACCTTCTTCTAA+CGG | + | chr5_1:45388134-45388153 | None:intergenic | 35.0% | |
| ! | TCTGAAATATGCATCATCAC+CGG | + | chr5_1:45388247-45388266 | None:intergenic | 35.0% |
| GCTACCATGTATATTGCATA+TGG | - | chr5_1:45388291-45388310 | Msa0732710:intron | 35.0% | |
| TCTATCAAGGGACATCATAA+TGG | - | chr5_1:45388316-45388335 | Msa0732710:intron | 35.0% | |
| GAGAGGAAGAATGATACATA+TGG | - | chr5_1:45388466-45388485 | Msa0732710:CDS | 35.0% | |
| ! | GAAAATTGATTCCAAGTCAC+TGG | - | chr5_1:45388647-45388666 | Msa0732710:intron | 35.0% |
| ! | ATTTATTTCTCGCCTATCTC+TGG | - | chr5_1:45388773-45388792 | Msa0732710:intron | 35.0% |
| CAGGAAAACTCATTTGATTG+TGG | - | chr5_1:45388896-45388915 | Msa0732710:intron | 35.0% | |
| !! | AACAATTGGTTAGTCTCAGA+GGG | + | chr5_1:45388979-45388998 | None:intergenic | 35.0% |
| GTGAAAACCACTTACAAAGT+TGG | + | chr5_1:45389002-45389021 | None:intergenic | 35.0% | |
| TAACTCCCTAGTGATTCATA+TGG | - | chr5_1:45389093-45389112 | Msa0732710:intron | 35.0% | |
| AGGAACCATATGAATCACTA+GGG | + | chr5_1:45389101-45389120 | None:intergenic | 35.0% | |
| AAGGAACCATATGAATCACT+AGG | + | chr5_1:45389102-45389121 | None:intergenic | 35.0% | |
| CCGTACGTTAATATTTGAAC+TGG | - | chr5_1:45389212-45389231 | Msa0732710:intron | 35.0% | |
| !! | TCAGTGTCATTTATTCAACG+TGG | - | chr5_1:45389326-45389345 | Msa0732710:intron | 35.0% |
| ATGGAAACATTTCTATTCCC+TGG | + | chr5_1:45389374-45389393 | None:intergenic | 35.0% | |
| ATGATTGCTGGTCAAAAGAT+TGG | + | chr5_1:45389473-45389492 | None:intergenic | 35.0% | |
| ! | TAGATGATGATAATGTTCGC+TGG | + | chr5_1:45389548-45389567 | None:intergenic | 35.0% |
| ! | TAGATGATGATAATGTTCGC+AGG | + | chr5_1:45389548-45389567 | None:intergenic | 35.0% |
| ! | TAGATGATGATAATGATCGC+TGG | + | chr5_1:45389674-45389693 | None:intergenic | 35.0% |
| ! | TAGATGATGATAATGATCGC+TGG | + | chr5_1:45389674-45389693 | None:intergenic | 35.0% |
| ! | TAGATGATGATAATGATCGC+TGG | + | chr5_1:45389674-45389693 | None:intergenic | 35.0% |
| ! | TAGATGATGATAATGATCGC+TGG | + | chr5_1:45389674-45389693 | None:intergenic | 35.0% |
| TCCCATGAGTTTCTCAGTTT+CGG | - | chr5_1:45383613-45383632 | Msa0732710:CDS | 40.0% | |
| ACCGAAACTGAGAAACTCAT+GGG | + | chr5_1:45383617-45383636 | None:intergenic | 40.0% | |
| TACCGAAACTGAGAAACTCA+TGG | + | chr5_1:45383618-45383637 | None:intergenic | 40.0% | |
| GAGCTTGGTAGAAATGTAAG+AGG | - | chr5_1:45384457-45384476 | Msa0732710:intron | 40.0% | |
| ! | TTTTCTTAACCAGTGCCTCA+GGG | - | chr5_1:45384640-45384659 | Msa0732710:intron | 40.0% |
| ! | GTCATTGATGTTGATGGAGT+TGG | - | chr5_1:45385038-45385057 | Msa0732710:CDS | 40.0% |
| ! | ATTGATGTTGATGGAGTTGG+TGG | - | chr5_1:45385041-45385060 | Msa0732710:CDS | 40.0% |
| GCTGTGAAACAAGATACTAG+TGG | - | chr5_1:45385143-45385162 | Msa0732710:intron | 40.0% | |
| GTGAAACAAGATACTAGTGG+TGG | - | chr5_1:45385146-45385165 | Msa0732710:intron | 40.0% | |
| ATCTTCGTTACAGTCAAGTC+AGG | - | chr5_1:45385172-45385191 | Msa0732710:intron | 40.0% | |
| CTCACAAATTGAGACCCTAA+AGG | + | chr5_1:45385209-45385228 | None:intergenic | 40.0% | |
| ! | TTTTTGCAGACGGAATCAGT+TGG | - | chr5_1:45385314-45385333 | Msa0732710:intron | 40.0% |
| TGCAATATCAGACTCCAAAC+TGG | + | chr5_1:45385351-45385370 | None:intergenic | 40.0% | |
| ATTCCCTCGTAATATGGATG+TGG | - | chr5_1:45385379-45385398 | Msa0732710:intron | 40.0% | |
| CTTCCACATCCATATTACGA+GGG | + | chr5_1:45385385-45385404 | None:intergenic | 40.0% | |
| !! | TGGAAGTAGCTTGTTAGTCT+AGG | + | chr5_1:45385425-45385444 | None:intergenic | 40.0% |
| !!! | GAGTTCTCTTTTTGGGACAT+AGG | - | chr5_1:45385487-45385506 | Msa0732710:intron | 40.0% |
| TTACTTAGCGTAACAGCATC+TGG | + | chr5_1:45385614-45385633 | None:intergenic | 40.0% | |
| !! | ACGTTTTGGCAAAAGACTGA+TGG | + | chr5_1:45385874-45385893 | None:intergenic | 40.0% |
| TGTGTATCCACCTTAGACAT+TGG | - | chr5_1:45385933-45385952 | Msa0732710:intron | 40.0% | |
| !! | CACCTTAGACATTGGCTTAA+CGG | - | chr5_1:45385941-45385960 | Msa0732710:intron | 40.0% |
| AACCGTTAAGCCAATGTCTA+AGG | + | chr5_1:45385946-45385965 | None:intergenic | 40.0% | |
| GAGAAAAGCTGTATGTTCCA+AGG | + | chr5_1:45386119-45386138 | None:intergenic | 40.0% | |
| ATCAGACGCCATTAAGAAGA+AGG | - | chr5_1:45386948-45386967 | Msa0732710:CDS | 40.0% | |
| AGAAGAGAGAGAACAGAAGA+AGG | - | chr5_1:45387849-45387868 | Msa0732710:CDS | 40.0% | |
| AGCGTATTAAAGTTGCTCCA+TGG | + | chr5_1:45388006-45388025 | None:intergenic | 40.0% | |
| TATCATATCAGCTATCGGTG+CGG | + | chr5_1:45388060-45388079 | None:intergenic | 40.0% | |
| AAAGAAGGAGAGTTCAAGGA+CGG | - | chr5_1:45388081-45388100 | Msa0732710:intron | 40.0% | |
| GTGAAGGAAGTGAATTGTGT+GGG | - | chr5_1:45388103-45388122 | Msa0732710:CDS | 40.0% | |
| TGAAGGAAGTGAATTGTGTG+GGG | - | chr5_1:45388104-45388123 | Msa0732710:CDS | 40.0% | |
| ACTGTTACTGCAAATCTGCA+AGG | + | chr5_1:45388159-45388178 | None:intergenic | 40.0% | |
| GCATATTTCAGACAAAGAGC+CGG | - | chr5_1:45388255-45388274 | Msa0732710:intron | 40.0% | |
| TGTCTGAAGAATGGAAAGAG+AGG | - | chr5_1:45388449-45388468 | Msa0732710:CDS | 40.0% | |
| TAAGCAAGACATACCTCAAC+GGG | + | chr5_1:45388532-45388551 | None:intergenic | 40.0% | |
| GTAAGCAAGACATACCTCAA+CGG | + | chr5_1:45388533-45388552 | None:intergenic | 40.0% | |
| AAAATAGGCAACTTCCGTAG+TGG | + | chr5_1:45388677-45388696 | None:intergenic | 40.0% | |
| ACTAATCATCAGCCAGAGAT+AGG | + | chr5_1:45388788-45388807 | None:intergenic | 40.0% | |
| ! | TCAAATGAGTTTTCCTGCTG+TGG | + | chr5_1:45388893-45388912 | None:intergenic | 40.0% |
| ! | TCATTATCTAGAGCTCTTCG+TGG | - | chr5_1:45388931-45388950 | Msa0732710:intron | 40.0% |
| CTCAGAGGGTTGAAATCAAA+TGG | + | chr5_1:45388965-45388984 | None:intergenic | 40.0% | |
| !! | GAACAATTGGTTAGTCTCAG+AGG | + | chr5_1:45388980-45388999 | None:intergenic | 40.0% |
| !!! | TTTTCTAGCTCAATGTGGAC+TGG | - | chr5_1:45389151-45389170 | Msa0732710:intron | 40.0% |
| TTTGAACTGGTGGAAAACCA+TGG | - | chr5_1:45389225-45389244 | Msa0732710:intron | 40.0% | |
| GAAAACCATGGTTCACATGA+AGG | - | chr5_1:45389237-45389256 | Msa0732710:intron | 40.0% | |
| AAAAGCCTTCATGTGAACCA+TGG | + | chr5_1:45389245-45389264 | None:intergenic | 40.0% | |
| CAATATATTCTGAGCAGTGC+TGG | + | chr5_1:45389287-45389306 | None:intergenic | 40.0% | |
| ATTGACAACAACAGGATTGG+TGG | - | chr5_1:45389303-45389322 | Msa0732710:intron | 40.0% | |
| !! | GTGTCATTTATTCAACGTGG+AGG | - | chr5_1:45389329-45389348 | Msa0732710:intron | 40.0% |
| ! | TCGATGATGATGATGATTGC+TGG | + | chr5_1:45389485-45389504 | None:intergenic | 40.0% |
| ATGTTCGCTGGTCAAAAGAT+TGG | + | chr5_1:45389536-45389555 | None:intergenic | 40.0% | |
| ATGTTCGCAGGTCAAAAGAT+TGG | + | chr5_1:45389599-45389618 | None:intergenic | 40.0% | |
| AATGATCGCTGGTCAAAAGA+GGG | + | chr5_1:45389663-45389682 | None:intergenic | 40.0% | |
| TAATGATCGCTGGTCAAAAG+AGG | + | chr5_1:45389664-45389683 | None:intergenic | 40.0% | |
| ATGATCGTTGGTCAAAAGAG+TGG | + | chr5_1:45389851-45389870 | None:intergenic | 40.0% | |
| TGAACCAGTTTCCTCCTTCT+CGG | - | chr5_1:45383542-45383561 | Msa0732710:CDS | 45.0% | |
| AGAGATTCCAAAACCCGAGA+AGG | + | chr5_1:45383559-45383578 | None:intergenic | 45.0% | |
| GCTGGAATCTCTCAATTCGA+TGG | - | chr5_1:45383851-45383870 | Msa0732710:CDS | 45.0% | |
| ! | TTGCAGGAGTCTCTCACTTT+TGG | - | chr5_1:45383909-45383928 | Msa0732710:CDS | 45.0% |
| ! | GTTTTCTTAACCAGTGCCTC+AGG | - | chr5_1:45384639-45384658 | Msa0732710:intron | 45.0% |
| TTTCTTAACCAGTGCCTCAG+GGG | - | chr5_1:45384641-45384660 | Msa0732710:intron | 45.0% | |
| ! | CTTTTCTTGTCATGCAGACG+AGG | - | chr5_1:45385016-45385035 | Msa0732710:CDS | 45.0% |
| GACGAGGTCATTGATGTTGA+TGG | - | chr5_1:45385032-45385051 | Msa0732710:CDS | 45.0% | |
| CTTCAATTTGGAGACCGATC+TGG | - | chr5_1:45385067-45385086 | Msa0732710:CDS | 45.0% | |
| CCTTCCACATCCATATTACG+AGG | + | chr5_1:45385386-45385405 | None:intergenic | 45.0% | |
| CCTCGTAATATGGATGTGGA+AGG | - | chr5_1:45385383-45385402 | Msa0732710:intron | 45.0% | |
| CATTGTGTGGTGGCTAATTC+TGG | - | chr5_1:45385526-45385545 | Msa0732710:intron | 45.0% | |
| ! | TTGGCAAAAGACTGATGGTG+AGG | + | chr5_1:45385869-45385888 | None:intergenic | 45.0% |
| CGTTAAGCCAATGTCTAAGG+TGG | + | chr5_1:45385943-45385962 | None:intergenic | 45.0% | |
| CTTTCGAAAGCTGGCTGATA+TGG | - | chr5_1:45386448-45386467 | Msa0732710:intron | 45.0% | |
| CAGATTTGCCGTCACAATCA+GGG | + | chr5_1:45386487-45386506 | None:intergenic | 45.0% | |
| !! | GATTTGTTATCCTGGCGAAG+TGG | - | chr5_1:45386690-45386709 | Msa0732710:intron | 45.0% |
| !! | AGGGCTAGCCTTCTTCTTAA+TGG | + | chr5_1:45386959-45386978 | None:intergenic | 45.0% |
| ! | AAGGCTAGCCCTAAGAAGAA+TGG | - | chr5_1:45386967-45386986 | Msa0732710:CDS | 45.0% |
| ! | AGGCTAGCCCTAAGAAGAAT+GGG | - | chr5_1:45386968-45386987 | Msa0732710:CDS | 45.0% |
| TATCGTGAAGCTTCCATCCT+TGG | - | chr5_1:45387889-45387908 | Msa0732710:CDS | 45.0% | |
| ! | CATGGATTGTTGATGTTGGC+TGG | + | chr5_1:45387988-45388007 | None:intergenic | 45.0% |
| CAGCCAACATCAACAATCCA+TGG | - | chr5_1:45387986-45388005 | Msa0732710:intron | 45.0% | |
| ! | GCTCCATGGATTGTTGATGT+TGG | + | chr5_1:45387992-45388011 | None:intergenic | 45.0% |
| GGTGAAGGAAGTGAATTGTG+TGG | - | chr5_1:45388102-45388121 | Msa0732710:CDS | 45.0% | |
| GAAGGAAGTGAATTGTGTGG+GGG | - | chr5_1:45388105-45388124 | Msa0732710:CDS | 45.0% | |
| AAGGAAGTGAATTGTGTGGG+GGG | - | chr5_1:45388106-45388125 | Msa0732710:CDS | 45.0% | |
| GAAATATGCATCATCACCGG+TGG | + | chr5_1:45388244-45388263 | None:intergenic | 45.0% | |
| AAGAGCCGGAAAAGTCACTT+AGG | - | chr5_1:45388269-45388288 | Msa0732710:intron | 45.0% | |
| ! | GGTAGCCTAAGTGACTTTTC+CGG | + | chr5_1:45388277-45388296 | None:intergenic | 45.0% |
| GTCTGAAAGACCTTGTGCAA+AGG | - | chr5_1:45388338-45388357 | Msa0732710:CDS | 45.0% | |
| AAGCAAGACATACCTCAACG+GGG | + | chr5_1:45388531-45388550 | None:intergenic | 45.0% | |
| AAGTCACTGGGAAACCACTA+CGG | - | chr5_1:45388660-45388679 | Msa0732710:intron | 45.0% | |
| TGTGACTGAATGTCCTTGAC+AGG | - | chr5_1:45388865-45388884 | Msa0732710:intron | 45.0% | |
| TTGAGATAAGCATCCGTAGG+TGG | + | chr5_1:45389180-45389199 | None:intergenic | 45.0% | |
| TTCTATTCCCTGGCCAGAAT+GGG | + | chr5_1:45389364-45389383 | None:intergenic | 45.0% | |
| TTTCTATTCCCTGGCCAGAA+TGG | + | chr5_1:45389365-45389384 | None:intergenic | 45.0% | |
| ! | TTTTGAACCAAGAGCCGCAT+CGG | - | chr5_1:45389428-45389447 | Msa0732710:intron | 45.0% |
| ATGATCGCTGGTCAAAAGAG+GGG | + | chr5_1:45389662-45389681 | None:intergenic | 45.0% | |
| ATGATCGCTGGTCAAAAGAG+TGG | + | chr5_1:45389662-45389681 | None:intergenic | 45.0% | |
| ATGATCGCTGGTCAAAAGAC+TGG | + | chr5_1:45389788-45389807 | None:intergenic | 45.0% | |
| ATGATCGCTGGTCAAAAGAG+TGG | + | chr5_1:45389662-45389681 | None:intergenic | 45.0% | |
| !! | AAACAAAAAATAAAAAATTT+CGG | + | chr5_1:45383965-45383984 | None:intergenic | 5.0% |
| !!! | ATTTTTAAAATTTTAAAGTA+TGG | - | chr5_1:45384297-45384316 | Msa0732710:CDS | 5.0% |
| !! | TATAACTTAAAAAATATATA+TGG | + | chr5_1:45389057-45389076 | None:intergenic | 5.0% |
| GAACCAGTTTCCTCCTTCTC+GGG | - | chr5_1:45383543-45383562 | Msa0732710:CDS | 50.0% | |
| AAACCCGAGAAGGAGGAAAC+TGG | + | chr5_1:45383549-45383568 | None:intergenic | 50.0% | |
| ! | GTTTCCTCCTTCTCGGGTTT+TGG | - | chr5_1:45383549-45383568 | Msa0732710:CDS | 50.0% |
| GATTCCAAAACCCGAGAAGG+AGG | + | chr5_1:45383556-45383575 | None:intergenic | 50.0% | |
| GAAATGTTAACCAGTGCCCC+CGG | - | chr5_1:45384508-45384527 | Msa0732710:intron | 50.0% | |
| AAATGTTAACCAGTGCCCCC+GGG | - | chr5_1:45384509-45384528 | Msa0732710:intron | 50.0% | |
| TGCTTCTTTAACCAGTGCCC+CGG | + | chr5_1:45384530-45384549 | None:intergenic | 50.0% | |
| ! | ACAGCATCTGGATCCCCTTT+TGG | + | chr5_1:45385602-45385621 | None:intergenic | 50.0% |
| AATCCCCACCCTGATTGTGA+CGG | - | chr5_1:45386476-45386495 | Msa0732710:intron | 50.0% | |
| TTTGCCGTCACAATCAGGGT+GGG | + | chr5_1:45386483-45386502 | None:intergenic | 50.0% | |
| ATTTGCCGTCACAATCAGGG+TGG | + | chr5_1:45386484-45386503 | None:intergenic | 50.0% | |
| GCAGATTTGCCGTCACAATC+AGG | + | chr5_1:45386488-45386507 | None:intergenic | 50.0% | |
| TCCAGTGATGTCTGCCAACA+TGG | + | chr5_1:45386660-45386679 | None:intergenic | 50.0% | |
| AGCCCTAAGAAGAATGGGTG+CGG | - | chr5_1:45386973-45386992 | Msa0732710:CDS | 50.0% | |
| ATGGGTGCGGCCTGTAAATA+AGG | - | chr5_1:45386986-45387005 | Msa0732710:CDS | 50.0% | |
| GTTGCTGCACGTTGCAATCA+AGG | - | chr5_1:45387962-45387981 | Msa0732710:intron | 50.0% | |
| AAAAATATTGGGGGGAGCCG+TGG | - | chr5_1:45388192-45388211 | Msa0732710:intron | 50.0% | |
| ATATGCATCATCACCGGTGG+CGG | + | chr5_1:45388241-45388260 | None:intergenic | 50.0% | |
| ! | TATGCGTTTTCTCCCCGTTG+AGG | - | chr5_1:45388516-45388535 | Msa0732710:intron | 50.0% |
| GTAGTGGTTTCCCAGTGACT+TGG | + | chr5_1:45388661-45388680 | None:intergenic | 50.0% | |
| !! | TGTGGACTGGTTTCCACCTA+CGG | - | chr5_1:45389164-45389183 | Msa0732710:intron | 50.0% |
| CGCTTGAGATAAGCATCCGT+AGG | + | chr5_1:45389183-45389202 | None:intergenic | 50.0% | |
| CTGGTTATCACCATCGTCAG+GGG | + | chr5_1:45389268-45389287 | None:intergenic | 50.0% | |
| GCTGGTTATCACCATCGTCA+GGG | + | chr5_1:45389269-45389288 | None:intergenic | 50.0% | |
| ! | TGCTGGTTATCACCATCGTC+AGG | + | chr5_1:45389270-45389289 | None:intergenic | 50.0% |
| TTTGAACCAAGAGCCGCATC+GGG | - | chr5_1:45389429-45389448 | Msa0732710:intron | 50.0% | |
| TCTCAGTGAAGTTCCCGATG+CGG | + | chr5_1:45389445-45389464 | None:intergenic | 50.0% | |
| AATGTTAACCAGTGCCCCCG+GGG | - | chr5_1:45384510-45384529 | Msa0732710:intron | 55.0% | |
| TTCTTTAACCAGTGCCCCGG+GGG | + | chr5_1:45384527-45384546 | None:intergenic | 55.0% | |
| CTTCTTTAACCAGTGCCCCG+GGG | + | chr5_1:45384528-45384547 | None:intergenic | 55.0% | |
| GCTTCTTTAACCAGTGCCCC+GGG | + | chr5_1:45384529-45384548 | None:intergenic | 55.0% | |
| GAGACCGATCTGGACACGTT+GGG | - | chr5_1:45385077-45385096 | Msa0732710:intron | 55.0% | |
| GCTTCCCAACGTGTCCAGAT+CGG | + | chr5_1:45385084-45385103 | None:intergenic | 55.0% | |
| TTGCCGTCACAATCAGGGTG+GGG | + | chr5_1:45386482-45386501 | None:intergenic | 55.0% | |
| GCCATGTTGGCAGACATCAC+TGG | - | chr5_1:45386656-45386675 | Msa0732710:intron | 55.0% | |
| GGCCGCACCCATTCTTCTTA+GGG | + | chr5_1:45386978-45386997 | None:intergenic | 55.0% | |
| AGGCCGCACCCATTCTTCTT+AGG | + | chr5_1:45386979-45386998 | None:intergenic | 55.0% | |
| AGCTATCGGTGCGGAGATTG+CGG | + | chr5_1:45388051-45388070 | None:intergenic | 55.0% | |
| GGAGAGTTCAAGGACGGTGA+AGG | - | chr5_1:45388087-45388106 | Msa0732710:CDS | 55.0% | |
| TCCTTGACAGGTACCACAGC+AGG | - | chr5_1:45388877-45388896 | Msa0732710:intron | 55.0% | |
| TCCTGCTGTGGTACCTGTCA+AGG | + | chr5_1:45388881-45388900 | None:intergenic | 55.0% | |
| ! | GAAGGCTTTTCCCCTGACGA+TGG | - | chr5_1:45389255-45389274 | Msa0732710:intron | 55.0% |
| !! | GAGGCATCGACTTCCCATTC+TGG | - | chr5_1:45389348-45389367 | Msa0732710:intron | 55.0% |
| ! | ATCGACTTCCCATTCTGGCC+AGG | - | chr5_1:45389353-45389372 | Msa0732710:intron | 55.0% |
| TCGACTTCCCATTCTGGCCA+GGG | - | chr5_1:45389354-45389373 | Msa0732710:intron | 55.0% | |
| TGTGTTAACCGGTGCCCCTG+AGG | + | chr5_1:45384658-45384677 | None:intergenic | 60.0% | |
| GGAGACCGATCTGGACACGT+TGG | - | chr5_1:45385076-45385095 | Msa0732710:intron | 60.0% | |
| !! | TGGGGGGTGCCGTTAGAAGA+AGG | - | chr5_1:45388122-45388141 | Msa0732710:CDS | 60.0% |
| !! | ATGGTGGCGGAAGGTAGCCA+CGG | + | chr5_1:45388212-45388231 | None:intergenic | 60.0% |
| GCTACCTTCCGCCACCATGA+AGG | - | chr5_1:45388214-45388233 | Msa0732710:intron | 60.0% | |
| GAAGTTCCCGATGCGGCTCT+TGG | + | chr5_1:45389438-45389457 | None:intergenic | 60.0% | |
| ! | AACCAGTGCCTCAGGGGCAC+CGG | - | chr5_1:45384647-45384666 | Msa0732710:intron | 65.0% |
| !! | CGGACCTTCATGGTGGCGGA+AGG | + | chr5_1:45388221-45388240 | None:intergenic | 65.0% |
| !! | GTGGCGGACCTTCATGGTGG+CGG | + | chr5_1:45388225-45388244 | None:intergenic | 65.0% |
| CCACCATGAAGGTCCGCCAC+CGG | - | chr5_1:45388225-45388244 | Msa0732710:intron | 65.0% | |
| !! | TCACCGGTGGCGGACCTTCA+TGG | + | chr5_1:45388231-45388250 | None:intergenic | 65.0% |
| AACCGGTGCCCCTGAGGCAC+TGG | + | chr5_1:45384652-45384671 | None:intergenic | 70.0% | |
| !! | CCGGTGGCGGACCTTCATGG+TGG | + | chr5_1:45388228-45388247 | None:intergenic | 70.0% |
| AACCAGTGCCCCCGGGGCAC+TGG | - | chr5_1:45384516-45384535 | Msa0732710:intron | 75.0% | |
| ! | AACCAGTGCCCCGGGGGCAC+TGG | + | chr5_1:45384521-45384540 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_1 | gene | 45383538 | 45389992 | 45383538 | ID=Msa0732710;Name=Msa0732710 |
| chr5_1 | mRNA | 45383538 | 45389992 | 45383538 | ID=Msa0732710-mRNA-1;Parent=Msa0732710;Name=Msa0732710-mRNA-1;_AED=0.19;_eAED=0.19;_QI=0|0|0|1|0.8|0.81|11|0|644 |
| chr5_1 | exon | 45389896 | 45389992 | 45389896 | ID=Msa0732710-mRNA-1:exon:12975;Parent=Msa0732710-mRNA-1 |
| chr5_1 | exon | 45389600 | 45389701 | 45389600 | ID=Msa0732710-mRNA-1:exon:12974;Parent=Msa0732710-mRNA-1 |
| chr5_1 | exon | 45388337 | 45388497 | 45388337 | ID=Msa0732710-mRNA-1:exon:12973;Parent=Msa0732710-mRNA-1 |
| chr5_1 | exon | 45388083 | 45388207 | 45388083 | ID=Msa0732710-mRNA-1:exon:12972;Parent=Msa0732710-mRNA-1 |
| chr5_1 | exon | 45387831 | 45387962 | 45387831 | ID=Msa0732710-mRNA-1:exon:12971;Parent=Msa0732710-mRNA-1 |
| chr5_1 | exon | 45386945 | 45387145 | 45386945 | ID=Msa0732710-mRNA-1:exon:12970;Parent=Msa0732710-mRNA-1 |
| chr5_1 | exon | 45386806 | 45386861 | 45386806 | ID=Msa0732710-mRNA-1:exon:12969;Parent=Msa0732710-mRNA-1 |
| chr5_1 | exon | 45385171 | 45385183 | 45385171 | ID=Msa0732710-mRNA-1:exon:12968;Parent=Msa0732710-mRNA-1 |
| chr5_1 | exon | 45384993 | 45385086 | 45384993 | ID=Msa0732710-mRNA-1:exon:12967;Parent=Msa0732710-mRNA-1 |
| chr5_1 | exon | 45384524 | 45384643 | 45384524 | ID=Msa0732710-mRNA-1:exon:12966;Parent=Msa0732710-mRNA-1 |
| chr5_1 | exon | 45383538 | 45384371 | 45383538 | ID=Msa0732710-mRNA-1:exon:12965;Parent=Msa0732710-mRNA-1 |
| chr5_1 | CDS | 45389896 | 45389992 | 45389896 | ID=Msa0732710-mRNA-1:cds;Parent=Msa0732710-mRNA-1 |
| chr5_1 | CDS | 45389600 | 45389701 | 45389600 | ID=Msa0732710-mRNA-1:cds;Parent=Msa0732710-mRNA-1 |
| chr5_1 | CDS | 45388337 | 45388497 | 45388337 | ID=Msa0732710-mRNA-1:cds;Parent=Msa0732710-mRNA-1 |
| chr5_1 | CDS | 45388083 | 45388207 | 45388083 | ID=Msa0732710-mRNA-1:cds;Parent=Msa0732710-mRNA-1 |
| chr5_1 | CDS | 45387831 | 45387962 | 45387831 | ID=Msa0732710-mRNA-1:cds;Parent=Msa0732710-mRNA-1 |
| chr5_1 | CDS | 45386945 | 45387145 | 45386945 | ID=Msa0732710-mRNA-1:cds;Parent=Msa0732710-mRNA-1 |
| chr5_1 | CDS | 45386806 | 45386861 | 45386806 | ID=Msa0732710-mRNA-1:cds;Parent=Msa0732710-mRNA-1 |
| chr5_1 | CDS | 45385171 | 45385183 | 45385171 | ID=Msa0732710-mRNA-1:cds;Parent=Msa0732710-mRNA-1 |
| chr5_1 | CDS | 45384993 | 45385086 | 45384993 | ID=Msa0732710-mRNA-1:cds;Parent=Msa0732710-mRNA-1 |
| chr5_1 | CDS | 45384524 | 45384643 | 45384524 | ID=Msa0732710-mRNA-1:cds;Parent=Msa0732710-mRNA-1 |
| chr5_1 | CDS | 45383538 | 45384371 | 45383538 | ID=Msa0732710-mRNA-1:cds;Parent=Msa0732710-mRNA-1 |
| Gene Sequence |
| Protein sequence |
