Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0015750 | Msa0016570 | 0.905814 | 2.883444e-80 | -8.615850e-47 |
| Msa0015750 | Msa0016580 | 0.886942 | 2.204398e-72 | -8.615850e-47 |
| Msa0015750 | Msa0064970 | 0.800677 | 1.288356e-48 | -8.615850e-47 |
| Msa0015750 | Msa0102070 | 0.862774 | 3.992790e-64 | -8.615850e-47 |
| Msa0015750 | Msa0110260 | 0.808687 | 2.740828e-50 | -8.615850e-47 |
| Msa0015750 | Msa0110270 | 0.874590 | 5.997569e-68 | -8.615850e-47 |
| Msa0015750 | Msa0111510 | 0.810589 | 1.069412e-50 | -8.615850e-47 |
| Msa0015750 | Msa0124100 | 0.813291 | 2.756513e-51 | -8.615850e-47 |
| Msa0015750 | Msa0142220 | 0.850793 | 1.349496e-60 | -8.615850e-47 |
| Msa0015750 | Msa0145750 | 0.818053 | 2.395977e-52 | -8.615850e-47 |
| Msa0015750 | Msa0153910 | 0.829383 | 5.308932e-55 | -8.615850e-47 |
| Msa0015750 | Msa0200000 | 0.843221 | 1.601153e-58 | -8.615850e-47 |
| Msa0015750 | Msa0227480 | 0.861100 | 1.300850e-63 | -8.615850e-47 |
| Msa0015750 | Msa0232850 | 0.844466 | 7.428136e-59 | -8.615850e-47 |
| Msa0015750 | Msa0267000 | 0.864709 | 1.000190e-64 | -8.615850e-47 |
| Msa0015750 | Msa0267010 | 0.878100 | 3.690844e-69 | -8.615850e-47 |
| Msa0015750 | Msa0270520 | 0.828730 | 7.644027e-55 | -8.615850e-47 |
| Msa0015750 | Msa0304170 | 0.933853 | 9.941102e-96 | -8.615850e-47 |
| Msa0015750 | Msa0306460 | 0.961003 | 3.354144e-119 | -8.615850e-47 |
| Msa0015750 | Msa0309020 | 0.801351 | 9.379775e-49 | -8.615850e-47 |
| Msa0015750 | Msa0342240 | 0.894041 | 3.580542e-75 | -8.615850e-47 |
| Msa0015750 | Msa0360510 | 0.858979 | 5.679450e-63 | -8.615850e-47 |
| Msa0015750 | Msa0362420 | 0.823899 | 1.080405e-53 | -8.615850e-47 |
| Msa0015750 | Msa0363300 | 0.802830 | 4.658045e-49 | -8.615850e-47 |
| Msa0015750 | Msa0365500 | 0.824750 | 6.816684e-54 | -8.615850e-47 |
| Msa0015750 | Msa0384800 | 0.851871 | 6.692490e-61 | -8.615850e-47 |
| Msa0015750 | Msa0396600 | 0.803814 | 2.912721e-49 | -8.615850e-47 |
| Msa0015750 | Msa0406120 | 0.807404 | 5.138566e-50 | -8.615850e-47 |
| Msa0015750 | Msa0407750 | 0.807921 | 3.991669e-50 | -8.615850e-47 |
| Msa0015750 | Msa0414410 | 0.836186 | 1.084564e-56 | -8.615850e-47 |
| Msa0015750 | Msa0414420 | 0.877639 | 5.346933e-69 | -8.615850e-47 |
| Msa0015750 | Msa0436780 | 0.814235 | 1.708220e-51 | -8.615850e-47 |
| Msa0015750 | Msa0436800 | 0.805162 | 1.524917e-49 | -8.615850e-47 |
| Msa0015750 | Msa0438620 | 0.845466 | 3.990173e-59 | -8.615850e-47 |
| Msa0015750 | Msa0444130 | 0.818262 | 2.148512e-52 | -8.615850e-47 |
| Msa0015750 | Msa0450000 | 0.829099 | 6.221713e-55 | -8.615850e-47 |
| Msa0015750 | Msa0450570 | 0.815157 | 1.067497e-51 | -8.615850e-47 |
| Msa0015750 | Msa0451730 | 0.818508 | 1.889653e-52 | -8.615850e-47 |
| Msa0015750 | Msa0452900 | 0.892448 | 1.573149e-74 | -8.615850e-47 |
| Msa0015750 | Msa0453120 | 0.847829 | 9.028430e-60 | -8.615850e-47 |
| Msa0015750 | Msa0454910 | 0.820097 | 8.209246e-53 | -8.615850e-47 |
| Msa0015750 | Msa0456840 | 0.817534 | 3.137067e-52 | -8.615850e-47 |
| Msa0015750 | Msa0459160 | 0.826369 | 2.817643e-54 | -8.615850e-47 |
| Msa0015750 | Msa0491590 | 0.841099 | 5.836461e-58 | -8.615850e-47 |
| Msa0015750 | Msa0502760 | 0.827849 | 1.246597e-54 | -8.615850e-47 |
| Msa0015750 | Msa0506270 | 0.842060 | 3.256037e-58 | -8.615850e-47 |
| Msa0015750 | Msa0564890 | 0.844566 | 6.982173e-59 | -8.615850e-47 |
| Msa0015750 | Msa0604350 | 0.835824 | 1.340305e-56 | -8.615850e-47 |
| Msa0015750 | Msa0636170 | 0.862614 | 4.474792e-64 | -8.615850e-47 |
| Msa0015750 | Msa0639610 | 0.813129 | 2.992457e-51 | -8.615850e-47 |
| Msa0015750 | Msa0678930 | 0.838570 | 2.658479e-57 | -8.615850e-47 |
| Msa0015750 | Msa0726140 | 0.856643 | 2.801127e-62 | -8.615850e-47 |
| Msa0015750 | Msa0729800 | 0.858969 | 5.716144e-63 | -8.615850e-47 |
| Msa0015750 | Msa0732710 | 0.813992 | 1.932868e-51 | -8.615850e-47 |
| Msa0015750 | Msa0733290 | 0.846979 | 1.545287e-59 | -8.615850e-47 |
| Msa0015750 | Msa0741990 | 0.834899 | 2.295047e-56 | -8.615850e-47 |
| Msa0015750 | Msa0743810 | 0.901302 | 3.073517e-78 | -8.615850e-47 |
| Msa0015750 | Msa0745060 | 0.887069 | 1.972639e-72 | -8.615850e-47 |
| Msa0015750 | Msa0764960 | 0.819401 | 1.184101e-52 | -8.615850e-47 |
| Msa0015750 | Msa0767720 | 0.863793 | 1.931440e-64 | -8.615850e-47 |
| Msa0015750 | Msa0775300 | 0.803442 | 3.478707e-49 | -8.615850e-47 |
| Msa0015750 | Msa0777870 | 0.816030 | 6.824108e-52 | -8.615850e-47 |
| Msa0015750 | Msa0783160 | 0.855054 | 8.161214e-62 | -8.615850e-47 |
| Msa0015750 | Msa0787600 | 0.841901 | 3.586291e-58 | -8.615850e-47 |
| Msa0015750 | Msa0789250 | 0.836487 | 9.094833e-57 | -8.615850e-47 |
| Msa0015750 | Msa0808010 | 0.832471 | 9.275761e-56 | -8.615850e-47 |
| Msa0015750 | Msa0808020 | 0.826675 | 2.381675e-54 | -8.615850e-47 |
| Msa0015750 | Msa0811080 | 0.872469 | 3.106214e-67 | -8.615850e-47 |
| Msa0015750 | Msa0811270 | 0.830485 | 2.859894e-55 | -8.615850e-47 |
| Msa0015750 | Msa0825860 | 0.878324 | 3.080273e-69 | -8.615850e-47 |
| Msa0015750 | Msa0826750 | 0.801059 | 1.076603e-48 | -8.615850e-47 |
| Msa0015750 | Msa0846330 | 0.842761 | 2.123076e-58 | -8.615850e-47 |
| Msa0015750 | Msa0846350 | 0.853827 | 1.847022e-61 | -8.615850e-47 |
| Msa0015750 | Msa0851390 | 0.807710 | 4.426165e-50 | -8.615850e-47 |
| Msa0015750 | Msa0858980 | 0.803438 | 3.485811e-49 | -8.615850e-47 |
| Msa0015750 | Msa0865320 | 0.866278 | 3.204850e-65 | -8.615850e-47 |
| Msa0015750 | Msa0872230 | 0.810748 | 9.879763e-51 | -8.615850e-47 |
| Msa0015750 | Msa0885290 | 0.842420 | 2.613643e-58 | -8.615850e-47 |
| Msa0015750 | Msa0886750 | 0.808644 | 2.798915e-50 | -8.615850e-47 |
| Msa0015750 | Msa0888370 | 0.846197 | 2.526121e-59 | -8.615850e-47 |
| Msa0015750 | Msa0896080 | 0.825277 | 5.117416e-54 | -8.615850e-47 |
| Msa0015750 | Msa0957680 | 0.826567 | 2.527023e-54 | -8.615850e-47 |
| Msa0015750 | Msa0957860 | 0.803234 | 3.842432e-49 | -8.615850e-47 |
| Msa0015750 | Msa0957960 | 0.804123 | 2.512516e-49 | -8.615850e-47 |
| Msa0015750 | Msa0981370 | 0.835452 | 1.663964e-56 | -8.615850e-47 |
| Msa0015750 | Msa0989060 | 0.853658 | 2.066358e-61 | -8.615850e-47 |
| Msa0015750 | Msa1015810 | 0.801235 | 9.909624e-49 | -8.615850e-47 |
| Msa0015750 | Msa1016280 | 0.866129 | 3.572443e-65 | -8.615850e-47 |
| Msa0015750 | Msa1024240 | 0.825402 | 4.779958e-54 | -8.615850e-47 |
| Msa0015750 | Msa1024370 | 0.851249 | 1.003705e-60 | -8.615850e-47 |
| Msa0015750 | Msa1025360 | 0.882758 | 7.960835e-71 | -8.615850e-47 |
| Msa0015750 | Msa1025370 | 0.866015 | 3.881610e-65 | -8.615850e-47 |
| Msa0015750 | Msa1030060 | 0.853106 | 2.975091e-61 | -8.615850e-47 |
| Msa0015750 | Msa1044830 | 0.869847 | 2.277428e-66 | -8.615850e-47 |
| Msa0015750 | Msa1044840 | 0.884546 | 1.748325e-71 | -8.615850e-47 |
| Msa0015750 | Msa1060840 | 0.815995 | 6.944564e-52 | -8.615850e-47 |
| Msa0015750 | Msa1071100 | 0.814788 | 1.288952e-51 | -8.615850e-47 |
| Msa0015750 | Msa1077460 | 0.813679 | 2.265908e-51 | -8.615850e-47 |
| Msa0015750 | Msa1092990 | 0.880050 | 7.552011e-70 | -8.615850e-47 |
| Msa0015750 | Msa1096580 | 0.805959 | 1.037458e-49 | -8.615850e-47 |
| Msa0015750 | Msa1099970 | 0.811602 | 6.447926e-51 | -8.615850e-47 |
| Msa0015750 | Msa1100980 | 0.881454 | 2.369368e-70 | -8.615850e-47 |
| Msa0015750 | Msa1109440 | 0.845289 | 4.457412e-59 | -8.615850e-47 |
| Msa0015750 | Msa1121200 | 0.832234 | 1.062185e-55 | -8.615850e-47 |
| Msa0015750 | Msa1135740 | 0.860839 | 1.561233e-63 | -8.615850e-47 |
| Msa0015750 | Msa1146110 | 0.917074 | 8.260905e-86 | -8.615850e-47 |
| Msa0015750 | Msa1148020 | 0.846307 | 2.358363e-59 | -8.615850e-47 |
| Msa0015750 | Msa1150370 | 0.821791 | 3.345869e-53 | -8.615850e-47 |
| Msa0015750 | Msa1160670 | 0.806744 | 7.088534e-50 | -8.615850e-47 |
| Msa0015750 | Msa1164120 | 0.804406 | 2.193946e-49 | -8.615850e-47 |
| Msa0015750 | Msa1173920 | 0.824792 | 6.662956e-54 | -8.615850e-47 |
| Msa0015750 | Msa1187940 | 0.879665 | 1.035298e-69 | -8.615850e-47 |
| Msa0015750 | Msa1187950 | 0.883002 | 6.485836e-71 | -8.615850e-47 |
| Msa0015750 | Msa1192640 | 0.866297 | 3.161594e-65 | -8.615850e-47 |
| Msa0015750 | Msa1193730 | 0.805109 | 1.564637e-49 | -8.615850e-47 |
| Msa0015750 | Msa1246880 | 0.816755 | 4.694760e-52 | -8.615850e-47 |
| Msa0015750 | Msa1260100 | 0.807937 | 3.959814e-50 | -8.615850e-47 |
| Msa0015750 | Msa1269670 | 0.881682 | 1.958924e-70 | -8.615850e-47 |
| Msa0015750 | Msa1270230 | 0.903772 | 2.455857e-79 | -8.615850e-47 |
| Msa0015750 | Msa1270240 | 0.868998 | 4.303887e-66 | -8.615850e-47 |
| Msa0015750 | Msa1270270 | 0.874251 | 7.815426e-68 | -8.615850e-47 |
| Msa0015750 | Msa1273230 | 0.820265 | 7.513661e-53 | -8.615850e-47 |
| Msa0015750 | Msa1283330 | 0.901312 | 3.044072e-78 | -8.615850e-47 |
| Msa0015750 | Msa1285930 | 0.874570 | 6.093159e-68 | -8.615850e-47 |
| Msa0015750 | Msa1287800 | 0.873275 | 1.667881e-67 | -8.615850e-47 |
| Msa0015750 | Msa1287810 | 0.889754 | 1.824464e-73 | -8.615850e-47 |
| Msa0015750 | Msa1287830 | 0.803335 | 3.660760e-49 | -8.615850e-47 |
| Msa0015750 | Msa1289430 | 0.824880 | 6.351680e-54 | -8.615850e-47 |
| Msa0015750 | Msa1305480 | 0.834437 | 2.998150e-56 | -8.615850e-47 |
| Msa0015750 | Msa1307890 | 0.817429 | 3.312834e-52 | -8.615850e-47 |
| Msa0015750 | Msa1310120 | 0.806350 | 8.582843e-50 | -8.615850e-47 |
| Msa0015750 | Msa1320300 | 0.821567 | 3.769899e-53 | -8.615850e-47 |
| Msa0015750 | Msa1340590 | 0.855350 | 6.691246e-62 | -8.615850e-47 |
| Msa0015750 | Msa1382690 | 0.807957 | 3.920526e-50 | -8.615850e-47 |
| Msa0015750 | Msa1397580 | 0.849762 | 2.626431e-60 | -8.615850e-47 |
| Msa0015750 | Msa1404000 | 0.856476 | 3.136389e-62 | -8.615850e-47 |
| Msa0015750 | Msa1408780 | 0.843660 | 1.222073e-58 | -8.615850e-47 |
| Msa0015750 | Msa1415310 | 0.863056 | 3.268975e-64 | -8.615850e-47 |
| Msa0015750 | Msa1422180 | 0.831093 | 2.029004e-55 | -8.615850e-47 |
| Msa0015750 | Msa1433120 | 0.860580 | 1.870355e-63 | -8.615850e-47 |
| Msa0015750 | Msa1451570 | 0.811287 | 7.550736e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 27 sgRNAs with CRISPR-Local
Find 208 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCAAAATTGGCTTGATTTC+TGG | -0.015744 | 1_1:+25391068 | Msa0015750:CDS |
| TATGTCGACCTTCTCAAAAT+TGG | 0.315780 | 1_1:+25391056 | Msa0015750:CDS |
| CCACTTGATTCCCTTGCGTT+GGG | 0.409880 | 1_1:-25390935 | None:intergenic |
| CCCACTTGATTCCCTTGCGT+TGG | 0.431316 | 1_1:-25390936 | None:intergenic |
| TAGCAATTATATACAACGTT+AGG | 0.458964 | 1_1:-25391095 | None:intergenic |
| AGGAAGCAATAAATTTAAGC+TGG | 0.504728 | 1_1:+25390396 | Msa0015750:five_prime_UTR |
| CGAGATACAACAATCTCATC+GGG | 0.510114 | 1_1:+25391033 | Msa0015750:CDS |
| GAGATCGGAAAGTTCTTCTC+AGG | 0.511097 | 1_1:+25390883 | Msa0015750:CDS |
| CAGGAAAGTAAAACACAAGA+TGG | 0.533616 | 1_1:+25390902 | Msa0015750:CDS |
| GTTCCTCTGTTCCCAACGCA+AGG | 0.538012 | 1_1:+25390924 | Msa0015750:CDS |
| AGCAGCAACAAAAGTAGTGA+AGG | 0.542395 | 1_1:+25390370 | Msa0015750:five_prime_UTR |
| ATTGTGTTAGGATGGGAGAT+CGG | 0.543831 | 1_1:+25390868 | Msa0015750:intron |
| AAGAGAGATATCTACGGCTA+AGG | 0.558282 | 1_1:+25389312 | Msa0015750:five_prime_UTR |
| TCGAGATACAACAATCTCAT+CGG | 0.561426 | 1_1:+25391032 | Msa0015750:CDS |
| AACAAAAGTAGTGAAGGAAG+AGG | 0.570751 | 1_1:+25390376 | Msa0015750:five_prime_UTR |
| CAGCCGCGAGTGTTAAAAGT+GGG | 0.578565 | 1_1:+25390963 | Msa0015750:CDS |
| TTGTGCTGTGGAAATGTAGG+TGG | 0.582624 | 1_1:+25389264 | None:intergenic |
| CCCAACGCAAGGGAATCAAG+TGG | 0.588631 | 1_1:+25390935 | Msa0015750:CDS |
| TTCCCTTGCGTTGGGAACAG+AGG | 0.594506 | 1_1:-25390927 | None:intergenic |
| CCAACGCAAGGGAATCAAGT+GGG | 0.597329 | 1_1:+25390936 | Msa0015750:CDS |
| TTCCTCTGTTCCCAACGCAA+GGG | 0.617747 | 1_1:+25390925 | Msa0015750:CDS |
| CAACGCAAGGGAATCAAGTG+GGG | 0.622276 | 1_1:+25390937 | Msa0015750:CDS |
| TCTAAGAAGAGAGATATCTA+CGG | 0.629357 | 1_1:+25389306 | Msa0015750:five_prime_UTR |
| GCCGCGAGTGTTAAAAGTGG+GGG | 0.633082 | 1_1:+25390965 | Msa0015750:CDS |
| TCAGCCGCGAGTGTTAAAAG+TGG | 0.638737 | 1_1:+25390962 | Msa0015750:CDS |
| AGCCGCGAGTGTTAAAAGTG+GGG | 0.663832 | 1_1:+25390964 | Msa0015750:CDS |
| AACGCAAGGGAATCAAGTGG+GGG | 0.669401 | 1_1:+25390938 | Msa0015750:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTATTTTTCATTTGCTATTT+TGG | - | chr1_1:25389602-25389621 | None:intergenic | 15.0% |
| !! | ATTAATTAAATGAATGAGTA+TGG | + | chr1_1:25390256-25390275 | Msa0015750:intron | 15.0% |
| !!! | GATATCAGTTATTTTTTATA+AGG | - | chr1_1:25390323-25390342 | None:intergenic | 15.0% |
| !!! | TTATTTTTCATTTGCTATTT+TGG | - | chr1_1:25389602-25389621 | None:intergenic | 15.0% |
| !! | ATTAATTAAATGAATGAGTA+TGG | + | chr1_1:25390256-25390275 | Msa0015750:intron | 15.0% |
| !!! | GATATCAGTTATTTTTTATA+AGG | - | chr1_1:25390323-25390342 | None:intergenic | 15.0% |
| !!! | ATAGATTTTTCTAGTCAATT+TGG | + | chr1_1:25389704-25389723 | Msa0015750:intron | 20.0% |
| !! | ATTAACAAATACCTCTTAAA+AGG | - | chr1_1:25389825-25389844 | None:intergenic | 20.0% |
| !! | TCATATTTAGTGAATAAAGT+TGG | + | chr1_1:25389890-25389909 | Msa0015750:intron | 20.0% |
| !! | AAAAAGCAAACGAAAAATAA+AGG | - | chr1_1:25390155-25390174 | None:intergenic | 20.0% |
| !! | TTTAATTAATGCTCTACATA+GGG | - | chr1_1:25390246-25390265 | None:intergenic | 20.0% |
| !! | ATTTAATTAATGCTCTACAT+AGG | - | chr1_1:25390247-25390266 | None:intergenic | 20.0% |
| !! | TGATAGTATCAATCTTATAT+AGG | + | chr1_1:25390424-25390443 | Msa0015750:intron | 20.0% |
| !! | TATACAATAGAATACTTAAG+TGG | - | chr1_1:25390708-25390727 | None:intergenic | 20.0% |
| !!! | ATAGATTTTTCTAGTCAATT+TGG | + | chr1_1:25389704-25389723 | Msa0015750:intron | 20.0% |
| !! | ATTAACAAATACCTCTTAAA+AGG | - | chr1_1:25389825-25389844 | None:intergenic | 20.0% |
| !! | TCATATTTAGTGAATAAAGT+TGG | + | chr1_1:25389890-25389909 | Msa0015750:intron | 20.0% |
| !! | AAAAAGCAAACGAAAAATAA+AGG | - | chr1_1:25390155-25390174 | None:intergenic | 20.0% |
| !! | TTTAATTAATGCTCTACATA+GGG | - | chr1_1:25390246-25390265 | None:intergenic | 20.0% |
| !! | ATTTAATTAATGCTCTACAT+AGG | - | chr1_1:25390247-25390266 | None:intergenic | 20.0% |
| !! | TGATAGTATCAATCTTATAT+AGG | + | chr1_1:25390424-25390443 | Msa0015750:intron | 20.0% |
| !! | TATACAATAGAATACTTAAG+TGG | - | chr1_1:25390708-25390727 | None:intergenic | 20.0% |
| !!! | TTGGTTTTGATTTTATGTTG+TGG | + | chr1_1:25389347-25389366 | Msa0015750:intron | 25.0% |
| !! | ATTTTATGTTGTGGAAATGA+AGG | + | chr1_1:25389356-25389375 | Msa0015750:intron | 25.0% |
| !! | TTTTATGTTGTGGAAATGAA+GGG | + | chr1_1:25389357-25389376 | Msa0015750:intron | 25.0% |
| !!! | TAAGTAGATTGGTGTTATAT+CGG | + | chr1_1:25389397-25389416 | Msa0015750:intron | 25.0% |
| !!! | GTATGCATTTTTATTTTGTC+TGG | + | chr1_1:25389846-25389865 | Msa0015750:intron | 25.0% |
| ! | AAACGAAAAATAAAGGAACA+AGG | - | chr1_1:25390148-25390167 | None:intergenic | 25.0% |
| ! | TATTACATCTGTATAGTTAC+TGG | + | chr1_1:25390541-25390560 | Msa0015750:intron | 25.0% |
| ! | GAAACATGTATAGGTATAAT+TGG | - | chr1_1:25390796-25390815 | None:intergenic | 25.0% |
| ! | TAGCAATTATATACAACGTT+AGG | - | chr1_1:25391098-25391117 | None:intergenic | 25.0% |
| !!! | TTGGTTTTGATTTTATGTTG+TGG | + | chr1_1:25389347-25389366 | Msa0015750:intron | 25.0% |
| !! | ATTTTATGTTGTGGAAATGA+AGG | + | chr1_1:25389356-25389375 | Msa0015750:intron | 25.0% |
| !! | TTTTATGTTGTGGAAATGAA+GGG | + | chr1_1:25389357-25389376 | Msa0015750:intron | 25.0% |
| !!! | TAAGTAGATTGGTGTTATAT+CGG | + | chr1_1:25389397-25389416 | Msa0015750:intron | 25.0% |
| !!! | GTATGCATTTTTATTTTGTC+TGG | + | chr1_1:25389846-25389865 | Msa0015750:intron | 25.0% |
| ! | AAACGAAAAATAAAGGAACA+AGG | - | chr1_1:25390148-25390167 | None:intergenic | 25.0% |
| ! | TATTACATCTGTATAGTTAC+TGG | + | chr1_1:25390541-25390560 | Msa0015750:intron | 25.0% |
| ! | GAAACATGTATAGGTATAAT+TGG | - | chr1_1:25390796-25390815 | None:intergenic | 25.0% |
| ! | TAGCAATTATATACAACGTT+AGG | - | chr1_1:25391098-25391117 | None:intergenic | 25.0% |
| TCTAAGAAGAGAGATATCTA+CGG | + | chr1_1:25389306-25389325 | Msa0015750:five_prime_UTR | 30.0% | |
| !! | GCTAAGGTATCTTTCATTTT+TGG | + | chr1_1:25389328-25389347 | Msa0015750:intron | 30.0% |
| TGAATACTATGAGACATGTT+TGG | + | chr1_1:25389467-25389486 | Msa0015750:intron | 30.0% | |
| TAAGCACTTGGAATATTGTT+TGG | + | chr1_1:25389519-25389538 | Msa0015750:intron | 30.0% | |
| !!! | TGGTTCTCTATTTTTTCAAG+AGG | + | chr1_1:25389724-25389743 | Msa0015750:intron | 30.0% |
| CAATGTGTATCCAACTAAAA+AGG | - | chr1_1:25389783-25389802 | None:intergenic | 30.0% | |
| GATCAGTCTTAAGAACTAAA+TGG | + | chr1_1:25389986-25390005 | Msa0015750:intron | 30.0% | |
| TTCAACAAATAAAGTAACGC+AGG | - | chr1_1:25390048-25390067 | None:intergenic | 30.0% | |
| AGGAAGCAATAAATTTAAGC+TGG | + | chr1_1:25390396-25390415 | Msa0015750:five_prime_UTR | 30.0% | |
| ! | TCAATCGTGTCAAATTTTCT+TGG | + | chr1_1:25390746-25390765 | Msa0015750:intron | 30.0% |
| ! | CAATCGTGTCAAATTTTCTT+GGG | + | chr1_1:25390747-25390766 | Msa0015750:intron | 30.0% |
| GCATAGTATGAAACATGTAT+AGG | - | chr1_1:25390805-25390824 | None:intergenic | 30.0% | |
| !! | CGCATGATTTTAACATTTAC+TGG | - | chr1_1:25390843-25390862 | None:intergenic | 30.0% |
| ! | AAGAACTTGTGTTTTACTTG+CGG | - | chr1_1:25390996-25391015 | None:intergenic | 30.0% |
| !! | AAATCAAGCCAATTTTGAGA+AGG | - | chr1_1:25391067-25391086 | None:intergenic | 30.0% |
| TCTAAGAAGAGAGATATCTA+CGG | + | chr1_1:25389306-25389325 | Msa0015750:five_prime_UTR | 30.0% | |
| !! | GCTAAGGTATCTTTCATTTT+TGG | + | chr1_1:25389328-25389347 | Msa0015750:intron | 30.0% |
| TGAATACTATGAGACATGTT+TGG | + | chr1_1:25389467-25389486 | Msa0015750:intron | 30.0% | |
| TAAGCACTTGGAATATTGTT+TGG | + | chr1_1:25389519-25389538 | Msa0015750:intron | 30.0% | |
| !!! | TGGTTCTCTATTTTTTCAAG+AGG | + | chr1_1:25389724-25389743 | Msa0015750:intron | 30.0% |
| CAATGTGTATCCAACTAAAA+AGG | - | chr1_1:25389783-25389802 | None:intergenic | 30.0% | |
| GATCAGTCTTAAGAACTAAA+TGG | + | chr1_1:25389986-25390005 | Msa0015750:intron | 30.0% | |
| TTCAACAAATAAAGTAACGC+AGG | - | chr1_1:25390048-25390067 | None:intergenic | 30.0% | |
| AGGAAGCAATAAATTTAAGC+TGG | + | chr1_1:25390396-25390415 | Msa0015750:five_prime_UTR | 30.0% | |
| ! | TCAATCGTGTCAAATTTTCT+TGG | + | chr1_1:25390746-25390765 | Msa0015750:intron | 30.0% |
| ! | CAATCGTGTCAAATTTTCTT+GGG | + | chr1_1:25390747-25390766 | Msa0015750:intron | 30.0% |
| GCATAGTATGAAACATGTAT+AGG | - | chr1_1:25390805-25390824 | None:intergenic | 30.0% | |
| !! | CGCATGATTTTAACATTTAC+TGG | - | chr1_1:25390843-25390862 | None:intergenic | 30.0% |
| ! | AAGAACTTGTGTTTTACTTG+CGG | - | chr1_1:25390996-25391015 | None:intergenic | 30.0% |
| !! | AAATCAAGCCAATTTTGAGA+AGG | - | chr1_1:25391067-25391086 | None:intergenic | 30.0% |
| !! | AAATGAAGGGTGTTATTGGT+TGG | + | chr1_1:25389370-25389389 | Msa0015750:intron | 35.0% |
| !! | AATGAAGGGTGTTATTGGTT+GGG | + | chr1_1:25389371-25389390 | Msa0015750:intron | 35.0% |
| !! | TAGATTGGTGTTATATCGGT+TGG | + | chr1_1:25389401-25389420 | Msa0015750:intron | 35.0% |
| !! | AGATTGGTGTTATATCGGTT+GGG | + | chr1_1:25389402-25389421 | Msa0015750:intron | 35.0% |
| !! | ATGATGCATGCCTTTTTAGT+TGG | + | chr1_1:25389770-25389789 | Msa0015750:intron | 35.0% |
| ! | TATGATGCATGCCTTTTAAG+AGG | + | chr1_1:25389811-25389830 | Msa0015750:intron | 35.0% |
| AAATAAAGTAACGCAGGAAG+GGG | - | chr1_1:25390042-25390061 | None:intergenic | 35.0% | |
| CAAATAAAGTAACGCAGGAA+GGG | - | chr1_1:25390043-25390062 | None:intergenic | 35.0% | |
| ACAAATAAAGTAACGCAGGA+AGG | - | chr1_1:25390044-25390063 | None:intergenic | 35.0% | |
| GTAATGTGTTCCCATTAAGA+AGG | + | chr1_1:25390178-25390197 | Msa0015750:intron | 35.0% | |
| ATCTTGAATGTTTGTGCTTC+AGG | + | chr1_1:25390340-25390359 | Msa0015750:intron | 35.0% | |
| AACAAAAGTAGTGAAGGAAG+AGG | + | chr1_1:25390376-25390395 | Msa0015750:five_prime_UTR | 35.0% | |
| TACATCTGTATAGTTACTGG+TGG | + | chr1_1:25390544-25390563 | Msa0015750:intron | 35.0% | |
| CTACCTAAGCTTCATCTATA+AGG | + | chr1_1:25390656-25390675 | Msa0015750:intron | 35.0% | |
| ATATCATCAGTTTCCTAGCT+GGG | - | chr1_1:25390684-25390703 | None:intergenic | 35.0% | |
| AATATCATCAGTTTCCTAGC+TGG | - | chr1_1:25390685-25390704 | None:intergenic | 35.0% | |
| CAGGAAAGTAAAACACAAGA+TGG | + | chr1_1:25390902-25390921 | Msa0015750:CDS | 35.0% | |
| TCGAGATACAACAATCTCAT+CGG | + | chr1_1:25391032-25391051 | Msa0015750:CDS | 35.0% | |
| TATGTCGACCTTCTCAAAAT+TGG | + | chr1_1:25391056-25391075 | Msa0015750:CDS | 35.0% | |
| !! | CTCAAAATTGGCTTGATTTC+TGG | + | chr1_1:25391068-25391087 | Msa0015750:CDS | 35.0% |
| !! | AAATGAAGGGTGTTATTGGT+TGG | + | chr1_1:25389370-25389389 | Msa0015750:intron | 35.0% |
| !! | AATGAAGGGTGTTATTGGTT+GGG | + | chr1_1:25389371-25389390 | Msa0015750:intron | 35.0% |
| !! | TAGATTGGTGTTATATCGGT+TGG | + | chr1_1:25389401-25389420 | Msa0015750:intron | 35.0% |
| !! | AGATTGGTGTTATATCGGTT+GGG | + | chr1_1:25389402-25389421 | Msa0015750:intron | 35.0% |
| !! | ATGATGCATGCCTTTTTAGT+TGG | + | chr1_1:25389770-25389789 | Msa0015750:intron | 35.0% |
| ! | TATGATGCATGCCTTTTAAG+AGG | + | chr1_1:25389811-25389830 | Msa0015750:intron | 35.0% |
| AAATAAAGTAACGCAGGAAG+GGG | - | chr1_1:25390042-25390061 | None:intergenic | 35.0% | |
| CAAATAAAGTAACGCAGGAA+GGG | - | chr1_1:25390043-25390062 | None:intergenic | 35.0% | |
| ACAAATAAAGTAACGCAGGA+AGG | - | chr1_1:25390044-25390063 | None:intergenic | 35.0% | |
| GTAATGTGTTCCCATTAAGA+AGG | + | chr1_1:25390178-25390197 | Msa0015750:intron | 35.0% | |
| ATCTTGAATGTTTGTGCTTC+AGG | + | chr1_1:25390340-25390359 | Msa0015750:intron | 35.0% | |
| AACAAAAGTAGTGAAGGAAG+AGG | + | chr1_1:25390376-25390395 | Msa0015750:five_prime_UTR | 35.0% | |
| TACATCTGTATAGTTACTGG+TGG | + | chr1_1:25390544-25390563 | Msa0015750:intron | 35.0% | |
| CTACCTAAGCTTCATCTATA+AGG | + | chr1_1:25390656-25390675 | Msa0015750:intron | 35.0% | |
| ATATCATCAGTTTCCTAGCT+GGG | - | chr1_1:25390684-25390703 | None:intergenic | 35.0% | |
| AATATCATCAGTTTCCTAGC+TGG | - | chr1_1:25390685-25390704 | None:intergenic | 35.0% | |
| CAGGAAAGTAAAACACAAGA+TGG | + | chr1_1:25390902-25390921 | Msa0015750:CDS | 35.0% | |
| TCGAGATACAACAATCTCAT+CGG | + | chr1_1:25391032-25391051 | Msa0015750:CDS | 35.0% | |
| TATGTCGACCTTCTCAAAAT+TGG | + | chr1_1:25391056-25391075 | Msa0015750:CDS | 35.0% | |
| !! | CTCAAAATTGGCTTGATTTC+TGG | + | chr1_1:25391068-25391087 | Msa0015750:CDS | 35.0% |
| AAGAGAGATATCTACGGCTA+AGG | + | chr1_1:25389312-25389331 | Msa0015750:five_prime_UTR | 40.0% | |
| !! | GTGGAAATGAAGGGTGTTAT+TGG | + | chr1_1:25389366-25389385 | Msa0015750:intron | 40.0% |
| !! | ATGAAGGGTGTTATTGGTTG+GGG | + | chr1_1:25389372-25389391 | Msa0015750:intron | 40.0% |
| TGGTTGGGGATTAAGTAGAT+TGG | + | chr1_1:25389386-25389405 | Msa0015750:intron | 40.0% | |
| !! | GATTGGTGTTATATCGGTTG+GGG | + | chr1_1:25389403-25389422 | Msa0015750:intron | 40.0% |
| !! | TGTTGACTTGCATAAGCACT+TGG | + | chr1_1:25389507-25389526 | Msa0015750:intron | 40.0% |
| ACTGTGCTCACCTTCTTAAT+GGG | - | chr1_1:25390191-25390210 | None:intergenic | 40.0% | |
| TACTGTGCTCACCTTCTTAA+TGG | - | chr1_1:25390192-25390211 | None:intergenic | 40.0% | |
| TTGGTTATACTGCATCCACA+TGG | - | chr1_1:25390218-25390237 | None:intergenic | 40.0% | |
| !! | TGCTCTACATAGGGAGTATT+TGG | - | chr1_1:25390237-25390256 | None:intergenic | 40.0% |
| AATGTTTGTGCTTCAGGTGT+GGG | + | chr1_1:25390346-25390365 | Msa0015750:intron | 40.0% | |
| AGCAGCAACAAAAGTAGTGA+AGG | + | chr1_1:25390370-25390389 | Msa0015750:five_prime_UTR | 40.0% | |
| ! | TCTAAGATGCGCACCTAATT+TGG | + | chr1_1:25390569-25390588 | Msa0015750:intron | 40.0% |
| CTAAGATGCGCACCTAATTT+GGG | + | chr1_1:25390570-25390589 | Msa0015750:intron | 40.0% | |
| TAAGATGCGCACCTAATTTG+GGG | + | chr1_1:25390571-25390590 | Msa0015750:intron | 40.0% | |
| AAGTTTCCAGTGGCCAATAA+GGG | - | chr1_1:25390610-25390629 | None:intergenic | 40.0% | |
| GTGCCTTATAGATGAAGCTT+AGG | - | chr1_1:25390662-25390681 | None:intergenic | 40.0% | |
| TCATGCGCTTGAATTGTGTT+AGG | + | chr1_1:25390856-25390875 | Msa0015750:intron | 40.0% | |
| CGCTTGAATTGTGTTAGGAT+GGG | + | chr1_1:25390861-25390880 | Msa0015750:intron | 40.0% | |
| ATTGTGTTAGGATGGGAGAT+CGG | + | chr1_1:25390868-25390887 | Msa0015750:intron | 40.0% | |
| CGAGATACAACAATCTCATC+GGG | + | chr1_1:25391033-25391052 | Msa0015750:CDS | 40.0% | |
| AAGAGAGATATCTACGGCTA+AGG | + | chr1_1:25389312-25389331 | Msa0015750:five_prime_UTR | 40.0% | |
| !! | GTGGAAATGAAGGGTGTTAT+TGG | + | chr1_1:25389366-25389385 | Msa0015750:intron | 40.0% |
| !! | ATGAAGGGTGTTATTGGTTG+GGG | + | chr1_1:25389372-25389391 | Msa0015750:intron | 40.0% |
| TGGTTGGGGATTAAGTAGAT+TGG | + | chr1_1:25389386-25389405 | Msa0015750:intron | 40.0% | |
| !! | GATTGGTGTTATATCGGTTG+GGG | + | chr1_1:25389403-25389422 | Msa0015750:intron | 40.0% |
| !! | TGTTGACTTGCATAAGCACT+TGG | + | chr1_1:25389507-25389526 | Msa0015750:intron | 40.0% |
| ACTGTGCTCACCTTCTTAAT+GGG | - | chr1_1:25390191-25390210 | None:intergenic | 40.0% | |
| TACTGTGCTCACCTTCTTAA+TGG | - | chr1_1:25390192-25390211 | None:intergenic | 40.0% | |
| TTGGTTATACTGCATCCACA+TGG | - | chr1_1:25390218-25390237 | None:intergenic | 40.0% | |
| !! | TGCTCTACATAGGGAGTATT+TGG | - | chr1_1:25390237-25390256 | None:intergenic | 40.0% |
| AATGTTTGTGCTTCAGGTGT+GGG | + | chr1_1:25390346-25390365 | Msa0015750:intron | 40.0% | |
| AGCAGCAACAAAAGTAGTGA+AGG | + | chr1_1:25390370-25390389 | Msa0015750:five_prime_UTR | 40.0% | |
| ! | TCTAAGATGCGCACCTAATT+TGG | + | chr1_1:25390569-25390588 | Msa0015750:intron | 40.0% |
| CTAAGATGCGCACCTAATTT+GGG | + | chr1_1:25390570-25390589 | Msa0015750:intron | 40.0% | |
| TAAGATGCGCACCTAATTTG+GGG | + | chr1_1:25390571-25390590 | Msa0015750:intron | 40.0% | |
| AAGTTTCCAGTGGCCAATAA+GGG | - | chr1_1:25390610-25390629 | None:intergenic | 40.0% | |
| GTGCCTTATAGATGAAGCTT+AGG | - | chr1_1:25390662-25390681 | None:intergenic | 40.0% | |
| TCATGCGCTTGAATTGTGTT+AGG | + | chr1_1:25390856-25390875 | Msa0015750:intron | 40.0% | |
| CGCTTGAATTGTGTTAGGAT+GGG | + | chr1_1:25390861-25390880 | Msa0015750:intron | 40.0% | |
| ATTGTGTTAGGATGGGAGAT+CGG | + | chr1_1:25390868-25390887 | Msa0015750:intron | 40.0% | |
| CGAGATACAACAATCTCATC+GGG | + | chr1_1:25391033-25391052 | Msa0015750:CDS | 40.0% | |
| ! | TTATATCGGTTGGGGATCAC+AGG | + | chr1_1:25389411-25389430 | Msa0015750:intron | 45.0% |
| GTGAGCACAGTATATCCATG+TGG | + | chr1_1:25390200-25390219 | Msa0015750:intron | 45.0% | |
| GAATGTTTGTGCTTCAGGTG+TGG | + | chr1_1:25390345-25390364 | Msa0015750:intron | 45.0% | |
| ! | TGTACGCTTGCTACCCTTAT+TGG | + | chr1_1:25390594-25390613 | Msa0015750:intron | 45.0% |
| CAAGTTTCCAGTGGCCAATA+AGG | - | chr1_1:25390611-25390630 | None:intergenic | 45.0% | |
| TTCCTCTGACAAGTTTCCAG+TGG | - | chr1_1:25390620-25390639 | None:intergenic | 45.0% | |
| GCGCTTGAATTGTGTTAGGA+TGG | + | chr1_1:25390860-25390879 | Msa0015750:intron | 45.0% | |
| GAGATCGGAAAGTTCTTCTC+AGG | + | chr1_1:25390883-25390902 | Msa0015750:CDS | 45.0% | |
| ! | TTATATCGGTTGGGGATCAC+AGG | + | chr1_1:25389411-25389430 | Msa0015750:intron | 45.0% |
| GTGAGCACAGTATATCCATG+TGG | + | chr1_1:25390200-25390219 | Msa0015750:intron | 45.0% | |
| GAATGTTTGTGCTTCAGGTG+TGG | + | chr1_1:25390345-25390364 | Msa0015750:intron | 45.0% | |
| ! | TGTACGCTTGCTACCCTTAT+TGG | + | chr1_1:25390594-25390613 | Msa0015750:intron | 45.0% |
| CAAGTTTCCAGTGGCCAATA+AGG | - | chr1_1:25390611-25390630 | None:intergenic | 45.0% | |
| TTCCTCTGACAAGTTTCCAG+TGG | - | chr1_1:25390620-25390639 | None:intergenic | 45.0% | |
| GCGCTTGAATTGTGTTAGGA+TGG | + | chr1_1:25390860-25390879 | Msa0015750:intron | 45.0% | |
| GAGATCGGAAAGTTCTTCTC+AGG | + | chr1_1:25390883-25390902 | Msa0015750:CDS | 45.0% | |
| GCAGTCAGTCTCAGTTTGCA+CGG | + | chr1_1:25390456-25390475 | Msa0015750:intron | 50.0% | |
| GCAAGCGTACACCCCAAATT+AGG | - | chr1_1:25390585-25390604 | None:intergenic | 50.0% | |
| TTGCTACCCTTATTGGCCAC+TGG | + | chr1_1:25390601-25390620 | Msa0015750:intron | 50.0% | |
| ! | CATCTATAAGGCACCCAGCT+AGG | + | chr1_1:25390668-25390687 | Msa0015750:intron | 50.0% |
| TTCCTCTGTTCCCAACGCAA+GGG | + | chr1_1:25390925-25390944 | Msa0015750:CDS | 50.0% | |
| CCACTTGATTCCCTTGCGTT+GGG | - | chr1_1:25390938-25390957 | None:intergenic | 50.0% | |
| CCAACGCAAGGGAATCAAGT+GGG | + | chr1_1:25390936-25390955 | Msa0015750:CDS | 50.0% | |
| CAACGCAAGGGAATCAAGTG+GGG | + | chr1_1:25390937-25390956 | Msa0015750:CDS | 50.0% | |
| AACGCAAGGGAATCAAGTGG+GGG | + | chr1_1:25390938-25390957 | Msa0015750:CDS | 50.0% | |
| TCAGCCGCGAGTGTTAAAAG+TGG | + | chr1_1:25390962-25390981 | Msa0015750:CDS | 50.0% | |
| CAGCCGCGAGTGTTAAAAGT+GGG | + | chr1_1:25390963-25390982 | Msa0015750:CDS | 50.0% | |
| AGCCGCGAGTGTTAAAAGTG+GGG | + | chr1_1:25390964-25390983 | Msa0015750:CDS | 50.0% | |
| !! | TCCCCCACTTTTAACACTCG+CGG | - | chr1_1:25390969-25390988 | None:intergenic | 50.0% |
| GCAGTCAGTCTCAGTTTGCA+CGG | + | chr1_1:25390456-25390475 | Msa0015750:intron | 50.0% | |
| GCAAGCGTACACCCCAAATT+AGG | - | chr1_1:25390585-25390604 | None:intergenic | 50.0% | |
| TTGCTACCCTTATTGGCCAC+TGG | + | chr1_1:25390601-25390620 | Msa0015750:intron | 50.0% | |
| ! | CATCTATAAGGCACCCAGCT+AGG | + | chr1_1:25390668-25390687 | Msa0015750:intron | 50.0% |
| TTCCTCTGTTCCCAACGCAA+GGG | + | chr1_1:25390925-25390944 | Msa0015750:CDS | 50.0% | |
| CCACTTGATTCCCTTGCGTT+GGG | - | chr1_1:25390938-25390957 | None:intergenic | 50.0% | |
| CCAACGCAAGGGAATCAAGT+GGG | + | chr1_1:25390936-25390955 | Msa0015750:CDS | 50.0% | |
| CAACGCAAGGGAATCAAGTG+GGG | + | chr1_1:25390937-25390956 | Msa0015750:CDS | 50.0% | |
| AACGCAAGGGAATCAAGTGG+GGG | + | chr1_1:25390938-25390957 | Msa0015750:CDS | 50.0% | |
| TCAGCCGCGAGTGTTAAAAG+TGG | + | chr1_1:25390962-25390981 | Msa0015750:CDS | 50.0% | |
| CAGCCGCGAGTGTTAAAAGT+GGG | + | chr1_1:25390963-25390982 | Msa0015750:CDS | 50.0% | |
| AGCCGCGAGTGTTAAAAGTG+GGG | + | chr1_1:25390964-25390983 | Msa0015750:CDS | 50.0% | |
| !! | TCCCCCACTTTTAACACTCG+CGG | - | chr1_1:25390969-25390988 | None:intergenic | 50.0% |
| TCAGTCTCAGTTTGCACGGC+TGG | + | chr1_1:25390460-25390479 | Msa0015750:intron | 55.0% | |
| GGCCACTGGAAACTTGTCAG+AGG | + | chr1_1:25390615-25390634 | Msa0015750:intron | 55.0% | |
| GTTCCTCTGTTCCCAACGCA+AGG | + | chr1_1:25390924-25390943 | Msa0015750:CDS | 55.0% | |
| TTCCCTTGCGTTGGGAACAG+AGG | - | chr1_1:25390930-25390949 | None:intergenic | 55.0% | |
| CCCAACGCAAGGGAATCAAG+TGG | + | chr1_1:25390935-25390954 | Msa0015750:CDS | 55.0% | |
| CCCACTTGATTCCCTTGCGT+TGG | - | chr1_1:25390939-25390958 | None:intergenic | 55.0% | |
| GCCGCGAGTGTTAAAAGTGG+GGG | + | chr1_1:25390965-25390984 | Msa0015750:CDS | 55.0% | |
| TCAGTCTCAGTTTGCACGGC+TGG | + | chr1_1:25390460-25390479 | Msa0015750:intron | 55.0% | |
| GGCCACTGGAAACTTGTCAG+AGG | + | chr1_1:25390615-25390634 | Msa0015750:intron | 55.0% | |
| GTTCCTCTGTTCCCAACGCA+AGG | + | chr1_1:25390924-25390943 | Msa0015750:CDS | 55.0% | |
| TTCCCTTGCGTTGGGAACAG+AGG | - | chr1_1:25390930-25390949 | None:intergenic | 55.0% | |
| CCCAACGCAAGGGAATCAAG+TGG | + | chr1_1:25390935-25390954 | Msa0015750:CDS | 55.0% | |
| CCCACTTGATTCCCTTGCGT+TGG | - | chr1_1:25390939-25390958 | None:intergenic | 55.0% | |
| GCCGCGAGTGTTAAAAGTGG+GGG | + | chr1_1:25390965-25390984 | Msa0015750:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_1 | gene | 25389270 | 25391118 | 25389270 | ID=Msa0015750;Name=Msa0015750 |
| chr1_1 | mRNA | 25389270 | 25391118 | 25389270 | ID=Msa0015750-mRNA-1;Parent=Msa0015750;Name=Msa0015750-mRNA-1;_AED=0.20;_eAED=0.20;_QI=124|0.5|0.33|1|0|0.33|3|0|79 |
| chr1_1 | exon | 25389270 | 25389333 | 25389270 | ID=Msa0015750-mRNA-1:exon:8808;Parent=Msa0015750-mRNA-1 |
| chr1_1 | exon | 25390362 | 25390420 | 25390362 | ID=Msa0015750-mRNA-1:exon:8809;Parent=Msa0015750-mRNA-1 |
| chr1_1 | exon | 25390878 | 25391118 | 25390878 | ID=Msa0015750-mRNA-1:exon:8810;Parent=Msa0015750-mRNA-1 |
| chr1_1 | five_prime_UTR | 25389270 | 25389333 | 25389270 | ID=Msa0015750-mRNA-1:five_prime_utr;Parent=Msa0015750-mRNA-1 |
| chr1_1 | five_prime_UTR | 25390362 | 25390420 | 25390362 | ID=Msa0015750-mRNA-1:five_prime_utr;Parent=Msa0015750-mRNA-1 |
| chr1_1 | five_prime_UTR | 25390878 | 25390878 | 25390878 | ID=Msa0015750-mRNA-1:five_prime_utr;Parent=Msa0015750-mRNA-1 |
| chr1_1 | CDS | 25390879 | 25391118 | 25390879 | ID=Msa0015750-mRNA-1:cds;Parent=Msa0015750-mRNA-1 |
| Gene Sequence |
| Protein sequence |
