Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1220870 | GAU33159.1 | 81.818 | 176 | 17 | 3 | 1 | 161 | 1 | 176 | 5.38e-89 | 271 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1220870 | sp|Q9S7U9|M2K2_ARATH | 55.172 | 174 | 65 | 2 | 1 | 161 | 1 | 174 | 2.63e-58 | 188 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0013540 | Msa1220870 | 0.810161 | 1.323003e-50 | -8.615850e-47 |
| Msa0017320 | Msa1220870 | 0.804587 | 2.011300e-49 | -8.615850e-47 |
| Msa0031180 | Msa1220870 | 0.820482 | 6.701027e-53 | -8.615850e-47 |
| Msa0051450 | Msa1220870 | 0.805543 | 1.269106e-49 | -8.615850e-47 |
| Msa0054820 | Msa1220870 | 0.803590 | 3.241643e-49 | -8.615850e-47 |
| Msa0056450 | Msa1220870 | 0.807583 | 4.709547e-50 | -8.615850e-47 |
| Msa0064920 | Msa1220870 | 0.801906 | 7.219153e-49 | -8.615850e-47 |
| Msa0065680 | Msa1220870 | -0.810328 | 1.217595e-50 | -8.615850e-47 |
| Msa0065950 | Msa1220870 | 0.835227 | 1.896819e-56 | -8.615850e-47 |
| Msa0078480 | Msa1220870 | 0.812763 | 3.599686e-51 | -8.615850e-47 |
| Msa0081650 | Msa1220870 | 0.832132 | 1.125322e-55 | -8.615850e-47 |
| Msa0082440 | Msa1220870 | 0.803855 | 2.856454e-49 | -8.615850e-47 |
| Msa0090390 | Msa1220870 | 0.816948 | 4.249311e-52 | -8.615850e-47 |
| Msa0092410 | Msa1220870 | 0.802460 | 5.552221e-49 | -8.615850e-47 |
| Msa0102270 | Msa1220870 | 0.817777 | 2.765918e-52 | -8.615850e-47 |
| Msa0116770 | Msa1220870 | 0.819657 | 1.035084e-52 | -8.615850e-47 |
| Msa0613710 | Msa1220870 | 0.801336 | 9.448623e-49 | -8.615850e-47 |
| Msa0615220 | Msa1220870 | 0.831932 | 1.260696e-55 | -8.615850e-47 |
| Msa0620620 | Msa1220870 | 0.802989 | 4.318086e-49 | -8.615850e-47 |
| Msa0626850 | Msa1220870 | 0.826859 | 2.152864e-54 | -8.615850e-47 |
| Msa0641730 | Msa1220870 | 0.819402 | 1.183280e-52 | -8.615850e-47 |
| Msa0661320 | Msa1220870 | 0.813383 | 2.631601e-51 | -8.615850e-47 |
| Msa0664970 | Msa1220870 | 0.804068 | 2.579996e-49 | -8.615850e-47 |
| Msa0667740 | Msa1220870 | 0.808015 | 3.811879e-50 | -8.615850e-47 |
| Msa0689420 | Msa1220870 | 0.806460 | 8.136496e-50 | -8.615850e-47 |
| Msa0689760 | Msa1220870 | 0.838672 | 2.502451e-57 | -8.615850e-47 |
| Msa0689780 | Msa1220870 | 0.805247 | 1.463954e-49 | -8.615850e-47 |
| Msa0705190 | Msa1220870 | 0.800381 | 1.480386e-48 | -8.615850e-47 |
| Msa0709160 | Msa1220870 | 0.815115 | 1.090404e-51 | -8.615850e-47 |
| Msa0711150 | Msa1220870 | 0.812472 | 4.168148e-51 | -8.615850e-47 |
| Msa0715410 | Msa1220870 | 0.817983 | 2.484802e-52 | -8.615850e-47 |
| Msa0716860 | Msa1220870 | 0.819558 | 1.090290e-52 | -8.615850e-47 |
| Msa0721280 | Msa1220870 | 0.809424 | 1.905148e-50 | -8.615850e-47 |
| Msa0749400 | Msa1220870 | 0.811691 | 6.167952e-51 | -8.615850e-47 |
| Msa0749440 | Msa1220870 | 0.809624 | 1.726190e-50 | -8.615850e-47 |
| Msa0751850 | Msa1220870 | 0.801302 | 9.601314e-49 | -8.615850e-47 |
| Msa0756380 | Msa1220870 | 0.816128 | 6.488679e-52 | -8.615850e-47 |
| Msa0757800 | Msa1220870 | 0.802678 | 5.005034e-49 | -8.615850e-47 |
| Msa0763890 | Msa1220870 | 0.827865 | 1.235374e-54 | -8.615850e-47 |
| Msa0763920 | Msa1220870 | 0.833552 | 4.996223e-56 | -8.615850e-47 |
| Msa0789560 | Msa1220870 | 0.815514 | 8.891361e-52 | -8.615850e-47 |
| Msa0800700 | Msa1220870 | 0.824444 | 8.046464e-54 | -8.615850e-47 |
| Msa0817460 | Msa1220870 | 0.835639 | 1.492385e-56 | -8.615850e-47 |
| Msa0826760 | Msa1220870 | 0.802311 | 5.959501e-49 | -8.615850e-47 |
| Msa0830230 | Msa1220870 | 0.816076 | 6.662632e-52 | -8.615850e-47 |
| Msa0831850 | Msa1220870 | 0.806762 | 7.028914e-50 | -8.615850e-47 |
| Msa0832090 | Msa1220870 | 0.817705 | 2.871062e-52 | -8.615850e-47 |
| Msa0126230 | Msa1220870 | 0.810100 | 1.363660e-50 | -8.615850e-47 |
| Msa0130720 | Msa1220870 | 0.812594 | 3.918670e-51 | -8.615850e-47 |
| Msa0137870 | Msa1220870 | 0.818121 | 2.312667e-52 | -8.615850e-47 |
| Msa0138020 | Msa1220870 | 0.801575 | 8.439899e-49 | -8.615850e-47 |
| Msa0143850 | Msa1220870 | 0.818333 | 2.069981e-52 | -8.615850e-47 |
| Msa0165210 | Msa1220870 | 0.816662 | 4.927805e-52 | -8.615850e-47 |
| Msa0169280 | Msa1220870 | 0.800690 | 1.280389e-48 | -8.615850e-47 |
| Msa0183760 | Msa1220870 | 0.801752 | 7.763128e-49 | -8.615850e-47 |
| Msa0187830 | Msa1220870 | 0.809501 | 1.833700e-50 | -8.615850e-47 |
| Msa0202410 | Msa1220870 | 0.804244 | 2.370970e-49 | -8.615850e-47 |
| Msa0212930 | Msa1220870 | 0.810450 | 1.145868e-50 | -8.615850e-47 |
| Msa0212990 | Msa1220870 | 0.806440 | 8.216333e-50 | -8.615850e-47 |
| Msa0217700 | Msa1220870 | 0.818212 | 2.205063e-52 | -8.615850e-47 |
| Msa0220730 | Msa1220870 | 0.806879 | 6.637433e-50 | -8.615850e-47 |
| Msa0225220 | Msa1220870 | 0.816600 | 5.085607e-52 | -8.615850e-47 |
| Msa0225670 | Msa1220870 | 0.813060 | 3.098397e-51 | -8.615850e-47 |
| Msa0231190 | Msa1220870 | 0.822646 | 2.118657e-53 | -8.615850e-47 |
| Msa0233370 | Msa1220870 | 0.819852 | 9.343743e-53 | -8.615850e-47 |
| Msa0233380 | Msa1220870 | 0.803656 | 3.140844e-49 | -8.615850e-47 |
| Msa0379610 | Msa1220870 | 0.801415 | 9.104314e-49 | -8.615850e-47 |
| Msa0381610 | Msa1220870 | -0.804400 | 2.199861e-49 | -8.615850e-47 |
| Msa0382270 | Msa1220870 | 0.802797 | 4.731193e-49 | -8.615850e-47 |
| Msa0382370 | Msa1220870 | 0.813270 | 2.786884e-51 | -8.615850e-47 |
| Msa0387050 | Msa1220870 | 0.813498 | 2.483467e-51 | -8.615850e-47 |
| Msa0387370 | Msa1220870 | 0.808264 | 3.373372e-50 | -8.615850e-47 |
| Msa0387950 | Msa1220870 | 0.802269 | 6.078041e-49 | -8.615850e-47 |
| Msa0395980 | Msa1220870 | 0.818424 | 1.974354e-52 | -8.615850e-47 |
| Msa0398200 | Msa1220870 | 0.802508 | 5.425912e-49 | -8.615850e-47 |
| Msa0403770 | Msa1220870 | 0.805649 | 1.205643e-49 | -8.615850e-47 |
| Msa0421300 | Msa1220870 | -0.804809 | 1.807694e-49 | -8.615850e-47 |
| Msa0432160 | Msa1220870 | 0.818939 | 1.508911e-52 | -8.615850e-47 |
| Msa0433410 | Msa1220870 | -0.817033 | 4.067042e-52 | -8.615850e-47 |
| Msa0438040 | Msa1220870 | 0.803804 | 2.927237e-49 | -8.615850e-47 |
| Msa0450400 | Msa1220870 | -0.812968 | 3.245599e-51 | -8.615850e-47 |
| Msa0473980 | Msa1220870 | 0.801017 | 1.097877e-48 | -8.615850e-47 |
| Msa0476680 | Msa1220870 | 0.828227 | 1.010691e-54 | -8.615850e-47 |
| Msa0983540 | Msa1220870 | -0.804560 | 2.037581e-49 | -8.615850e-47 |
| Msa0986510 | Msa1220870 | 0.831467 | 1.642456e-55 | -8.615850e-47 |
| Msa1002850 | Msa1220870 | 0.817706 | 2.869058e-52 | -8.615850e-47 |
| Msa1006010 | Msa1220870 | -0.811368 | 7.250211e-51 | -8.615850e-47 |
| Msa1010070 | Msa1220870 | 0.800262 | 1.565099e-48 | -8.615850e-47 |
| Msa1026640 | Msa1220870 | 0.806378 | 8.468812e-50 | -8.615850e-47 |
| Msa1027300 | Msa1220870 | 0.800990 | 1.111956e-48 | -8.615850e-47 |
| Msa1027360 | Msa1220870 | 0.815991 | 6.961039e-52 | -8.615850e-47 |
| Msa1039710 | Msa1220870 | -0.805468 | 1.315637e-49 | -8.615850e-47 |
| Msa1077070 | Msa1220870 | 0.816473 | 5.432190e-52 | -8.615850e-47 |
| Msa1079860 | Msa1220870 | 0.804484 | 2.113183e-49 | -8.615850e-47 |
| Msa1089460 | Msa1220870 | 0.802639 | 5.098712e-49 | -8.615850e-47 |
| Msa1095790 | Msa1220870 | 0.806265 | 8.944923e-50 | -8.615850e-47 |
| Msa1098890 | Msa1220870 | 0.823722 | 1.188610e-53 | -8.615850e-47 |
| Msa0241140 | Msa1220870 | 0.801969 | 7.007252e-49 | -8.615850e-47 |
| Msa0241470 | Msa1220870 | 0.805587 | 1.241930e-49 | -8.615850e-47 |
| Msa0253200 | Msa1220870 | 0.822556 | 2.223323e-53 | -8.615850e-47 |
| Msa0253290 | Msa1220870 | 0.804862 | 1.762275e-49 | -8.615850e-47 |
| Msa0259220 | Msa1220870 | 0.801800 | 7.590451e-49 | -8.615850e-47 |
| Msa0264830 | Msa1220870 | 0.801066 | 1.073104e-48 | -8.615850e-47 |
| Msa0265150 | Msa1220870 | 0.806190 | 9.275980e-50 | -8.615850e-47 |
| Msa0271360 | Msa1220870 | 0.803035 | 4.223769e-49 | -8.615850e-47 |
| Msa0278580 | Msa1220870 | 0.805068 | 1.595322e-49 | -8.615850e-47 |
| Msa0292030 | Msa1220870 | 0.821234 | 4.499683e-53 | -8.615850e-47 |
| Msa0296820 | Msa1220870 | 0.829062 | 6.350297e-55 | -8.615850e-47 |
| Msa0304100 | Msa1220870 | 0.861933 | 7.238495e-64 | -8.615850e-47 |
| Msa0305330 | Msa1220870 | 0.828568 | 8.361191e-55 | -8.615850e-47 |
| Msa0309880 | Msa1220870 | 0.812079 | 5.078462e-51 | -8.615850e-47 |
| Msa0311720 | Msa1220870 | 0.824221 | 9.078558e-54 | -8.615850e-47 |
| Msa0317960 | Msa1220870 | 0.805342 | 1.398506e-49 | -8.615850e-47 |
| Msa0320430 | Msa1220870 | 0.815631 | 8.375210e-52 | -8.615850e-47 |
| Msa0321690 | Msa1220870 | 0.803422 | 3.512560e-49 | -8.615850e-47 |
| Msa0322900 | Msa1220870 | 0.811417 | 7.074332e-51 | -8.615850e-47 |
| Msa0330310 | Msa1220870 | 0.809100 | 2.235386e-50 | -8.615850e-47 |
| Msa0330340 | Msa1220870 | 0.813862 | 2.064264e-51 | -8.615850e-47 |
| Msa0336310 | Msa1220870 | 0.811026 | 8.601272e-51 | -8.615850e-47 |
| Msa0340340 | Msa1220870 | 0.805413 | 1.350897e-49 | -8.615850e-47 |
| Msa0340690 | Msa1220870 | 0.809615 | 1.733980e-50 | -8.615850e-47 |
| Msa0340710 | Msa1220870 | 0.816716 | 4.791042e-52 | -8.615850e-47 |
| Msa0341230 | Msa1220870 | 0.800690 | 1.280238e-48 | -8.615850e-47 |
| Msa0342010 | Msa1220870 | 0.816162 | 6.376143e-52 | -8.615850e-47 |
| Msa0363400 | Msa1220870 | 0.820573 | 6.385285e-53 | -8.615850e-47 |
| Msa1122780 | Msa1220870 | 0.817890 | 2.608362e-52 | -8.615850e-47 |
| Msa1137570 | Msa1220870 | 0.813906 | 2.018648e-51 | -8.615850e-47 |
| Msa1142670 | Msa1220870 | 0.803995 | 2.670830e-49 | -8.615850e-47 |
| Msa1143850 | Msa1220870 | 0.822594 | 2.179534e-53 | -8.615850e-47 |
| Msa1144040 | Msa1220870 | 0.805955 | 1.039727e-49 | -8.615850e-47 |
| Msa1182770 | Msa1220870 | 0.804789 | 1.824918e-49 | -8.615850e-47 |
| Msa1190970 | Msa1220870 | 0.804318 | 2.287975e-49 | -8.615850e-47 |
| Msa1200420 | Msa1220870 | 0.802341 | 5.873828e-49 | -8.615850e-47 |
| Msa1201640 | Msa1220870 | 0.826753 | 2.281842e-54 | -8.615850e-47 |
| Msa1205590 | Msa1220870 | 0.807805 | 4.224321e-50 | -8.615850e-47 |
| Msa1211340 | Msa1220870 | 0.818022 | 2.434948e-52 | -8.615850e-47 |
| Msa1215070 | Msa1220870 | 0.801282 | 9.690526e-49 | -8.615850e-47 |
| Msa1220870 | Msa1224580 | -0.803969 | 2.704246e-49 | -8.615850e-47 |
| Msa1220870 | Msa1232740 | 0.800439 | 1.440724e-48 | -8.615850e-47 |
| Msa1220870 | Msa1242660 | 0.801607 | 8.314669e-49 | -8.615850e-47 |
| Msa1220870 | Msa1244640 | 0.802697 | 4.961794e-49 | -8.615850e-47 |
| Msa1220870 | Msa1253450 | 0.841463 | 4.679368e-58 | -8.615850e-47 |
| Msa1220870 | Msa1254620 | 0.817990 | 2.475174e-52 | -8.615850e-47 |
| Msa1220870 | Msa1259640 | 0.818558 | 1.841461e-52 | -8.615850e-47 |
| Msa1220870 | Msa1263290 | -0.819587 | 1.074176e-52 | -8.615850e-47 |
| Msa1220870 | Msa1265590 | 0.800481 | 1.412684e-48 | -8.615850e-47 |
| Msa1220870 | Msa1270660 | 0.821067 | 4.916811e-53 | -8.615850e-47 |
| Msa1220870 | Msa1270730 | 0.817363 | 3.427777e-52 | -8.615850e-47 |
| Msa1220870 | Msa1297530 | 0.808857 | 2.520669e-50 | -8.615850e-47 |
| Msa1220870 | Msa1304810 | 0.802064 | 6.698872e-49 | -8.615850e-47 |
| Msa1220870 | Msa1305350 | 0.800438 | 1.440924e-48 | -8.615850e-47 |
| Msa1220870 | Msa1313320 | 0.800942 | 1.137420e-48 | -8.615850e-47 |
| Msa1220870 | Msa1329790 | 0.817049 | 4.032739e-52 | -8.615850e-47 |
| Msa1220870 | Msa1331000 | 0.801421 | 9.074615e-49 | -8.615850e-47 |
| Msa1220870 | Msa1331080 | 0.802150 | 6.430272e-49 | -8.615850e-47 |
| Msa1220870 | Msa1333420 | 0.802077 | 6.656601e-49 | -8.615850e-47 |
| Msa1220870 | Msa1333730 | 0.801710 | 7.917101e-49 | -8.615850e-47 |
| Msa1220870 | Msa1349450 | 0.811306 | 7.480017e-51 | -8.615850e-47 |
| Msa1220870 | Msa1353470 | 0.807367 | 5.233994e-50 | -8.615850e-47 |
| Msa1220870 | Msa1357890 | 0.810691 | 1.016506e-50 | -8.615850e-47 |
| Msa1220870 | Msa1371940 | 0.803442 | 3.479992e-49 | -8.615850e-47 |
| Msa1220870 | Msa1398090 | 0.814823 | 1.266309e-51 | -8.615850e-47 |
| Msa1220870 | Msa1401460 | 0.832337 | 1.001104e-55 | -8.615850e-47 |
| Msa1220870 | Msa1420250 | 0.839299 | 1.721731e-57 | -8.615850e-47 |
| Msa1220870 | Msa1420270 | 0.815351 | 9.667044e-52 | -8.615850e-47 |
| Msa1220870 | Msa1422430 | 0.836397 | 9.583529e-57 | -8.615850e-47 |
| Msa1220870 | Msa1426910 | 0.837045 | 6.553437e-57 | -8.615850e-47 |
| Msa1220870 | Msa1434040 | 0.819521 | 1.112148e-52 | -8.615850e-47 |
| Msa1220870 | Msa1435070 | 0.807040 | 6.138103e-50 | -8.615850e-47 |
| Msa1220870 | Msa1435260 | 0.804056 | 2.594508e-49 | -8.615850e-47 |
| Msa1220870 | Msa1439710 | 0.803656 | 3.142032e-49 | -8.615850e-47 |
| Msa1220870 | Msa1443610 | 0.814840 | 1.255358e-51 | -8.615850e-47 |
| Msa1220870 | Msa1444120 | 0.804299 | 2.309497e-49 | -8.615850e-47 |
| Msa1220870 | Msa1446780 | 0.809182 | 2.147573e-50 | -8.615850e-47 |
| Msa1220870 | Msa1450720 | 0.818182 | 2.239630e-52 | -8.615850e-47 |
| Msa1220870 | Msa1454570 | 0.803806 | 2.924594e-49 | -8.615850e-47 |
| Msa1220870 | Msa1454960 | 0.818821 | 1.604465e-52 | -8.615850e-47 |
| Msa1220870 | Msa1457160 | 0.803700 | 3.075564e-49 | -8.615850e-47 |
| Msa1220870 | Msa1460320 | -0.840869 | 6.704952e-58 | -8.615850e-47 |
| Msa1220870 | Msa1462360 | 0.810893 | 9.192278e-51 | -8.615850e-47 |
| Msa1220870 | Msa1462660 | 0.805520 | 1.283046e-49 | -8.615850e-47 |
| Msa1220870 | Msa1462930 | 0.809998 | 1.434064e-50 | -8.615850e-47 |
| Msa1220870 | Msa1467000 | 0.834850 | 2.361652e-56 | -8.615850e-47 |
| Msa0483740 | Msa1220870 | 0.822711 | 2.046707e-53 | -8.615850e-47 |
| Msa0491000 | Msa1220870 | 0.809524 | 1.813261e-50 | -8.615850e-47 |
| Msa0491250 | Msa1220870 | 0.803617 | 3.200070e-49 | -8.615850e-47 |
| Msa0510290 | Msa1220870 | 0.821063 | 4.926170e-53 | -8.615850e-47 |
| Msa0518380 | Msa1220870 | 0.803273 | 3.771702e-49 | -8.615850e-47 |
| Msa0521010 | Msa1220870 | 0.827791 | 1.287253e-54 | -8.615850e-47 |
| Msa0559500 | Msa1220870 | 0.811940 | 5.444363e-51 | -8.615850e-47 |
| Msa0576680 | Msa1220870 | 0.806379 | 8.463636e-50 | -8.615850e-47 |
| Msa0582280 | Msa1220870 | 0.812871 | 3.408358e-51 | -8.615850e-47 |
| Msa0587030 | Msa1220870 | 0.810733 | 9.951704e-51 | -8.615850e-47 |
| Msa0594200 | Msa1220870 | 0.808619 | 2.833398e-50 | -8.615850e-47 |
| Msa0844110 | Msa1220870 | 0.827039 | 1.948986e-54 | -8.615850e-47 |
| Msa0868160 | Msa1220870 | 0.809169 | 2.160961e-50 | -8.615850e-47 |
| Msa0872440 | Msa1220870 | 0.802197 | 6.288756e-49 | -8.615850e-47 |
| Msa0880040 | Msa1220870 | 0.823753 | 1.168912e-53 | -8.615850e-47 |
| Msa0902830 | Msa1220870 | 0.813641 | 2.309836e-51 | -8.615850e-47 |
| Msa0927990 | Msa1220870 | 0.803742 | 3.015437e-49 | -8.615850e-47 |
| Msa0933100 | Msa1220870 | 0.806815 | 6.846803e-50 | -8.615850e-47 |
| Msa0936390 | Msa1220870 | 0.810971 | 8.841271e-51 | -8.615850e-47 |
| Msa0945120 | Msa1220870 | 0.810632 | 1.046841e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1220870 | MtrunA17_Chr4g0070851 | 85.632 | 174 | 12 | 2 | 1 | 161 | 1 | 174 | 3.93e-92 | 271 |
| Msa1220870 | MtrunA17_Chr2g0299991 | 64.368 | 174 | 49 | 2 | 1 | 161 | 1 | 174 | 5.16e-72 | 220 |
| Msa1220870 | MtrunA17_Chr6g0487231 | 48.485 | 165 | 71 | 3 | 10 | 161 | 10 | 173 | 5.67e-44 | 148 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1220870 | AT4G29810.1 | 55.172 | 174 | 65 | 2 | 1 | 161 | 1 | 174 | 2.68e-59 | 188 |
| Msa1220870 | AT4G29810.3 | 52.459 | 183 | 65 | 3 | 1 | 161 | 1 | 183 | 3.06e-56 | 179 |
| Msa1220870 | AT4G29810.2 | 52.459 | 183 | 65 | 3 | 1 | 161 | 1 | 183 | 3.99e-56 | 180 |
| Msa1220870 | AT4G26070.1 | 50.847 | 177 | 66 | 5 | 1 | 161 | 1 | 172 | 4.92e-52 | 168 |
| Msa1220870 | AT4G26070.2 | 50.847 | 177 | 66 | 5 | 1 | 161 | 1 | 172 | 1.25e-51 | 168 |
| Msa1220870 | AT4G26070.3 | 50.847 | 177 | 66 | 5 | 1 | 161 | 1 | 172 | 1.25e-51 | 168 |
| Msa1220870 | AT4G26070.5 | 54.305 | 151 | 50 | 3 | 27 | 161 | 12 | 159 | 1.60e-48 | 160 |
| Msa1220870 | AT4G26070.4 | 53.642 | 151 | 51 | 3 | 27 | 161 | 24 | 171 | 9.54e-48 | 158 |
| Msa1220870 | AT5G56580.1 | 46.386 | 166 | 74 | 4 | 10 | 161 | 11 | 175 | 1.01e-42 | 145 |
Find 34 sgRNAs with CRISPR-Local
Find 202 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATCATGAAGAAAGGAAATT+TGG | 0.159935 | 8_1:-84253363 | None:intergenic |
| GACTGAAAGTGGAACGTTTA+AGG | 0.250395 | 8_1:-84253177 | Msa1220870:CDS |
| TGGTTGTCTGTTGCCTTGAT+TGG | 0.273829 | 8_1:+84251995 | None:intergenic |
| GGTTGTCTGTTGCCTTGATT+GGG | 0.315702 | 8_1:+84251996 | None:intergenic |
| CTATGTCTGCCAAACTTAAC+TGG | 0.397225 | 8_1:+84251975 | None:intergenic |
| AACAGACAACCAGTTAAGTT+TGG | 0.402107 | 8_1:-84251984 | Msa1220870:CDS |
| ATCATGAAGAAAGGAAATTT+GGG | 0.406915 | 8_1:-84253362 | Msa1220870:CDS |
| TCTTTCTGCCATTTGTAAGC+AGG | 0.421529 | 8_1:-84250472 | None:intergenic |
| AAACGGAGGGGTGGTTCAAT+TGG | 0.436890 | 8_1:-84251928 | Msa1220870:CDS |
| TTCAATTGGTGCAACACAAA+TGG | 0.446274 | 8_1:-84251914 | Msa1220870:CDS |
| ATAGACATAGTGAAAGTTGT+TGG | 0.462621 | 8_1:-84251956 | Msa1220870:CDS |
| AAGAAAGGAAATTTGGGTCT+CGG | 0.491021 | 8_1:-84253356 | Msa1220870:CDS |
| TTACAAATGGCAGAAAGATA+AGG | 0.491254 | 8_1:+84250477 | None:intergenic |
| AAAGCAACTTGATCAGTTTG+AGG | 0.491651 | 8_1:+84253317 | None:intergenic |
| CATAGTGAAAGTTGTTGGAA+AGG | 0.519423 | 8_1:-84251951 | Msa1220870:CDS |
| ACTTCCCACCTGCTTACAAA+TGG | 0.521688 | 8_1:+84250464 | None:intergenic |
| CACCGTTGTCATAGAATGAC+TGG | 0.525699 | 8_1:+84250577 | None:intergenic |
| TTTAGCTATCTGCTTGCGCA+CGG | 0.527497 | 8_1:+84250650 | None:intergenic |
| TGGTAGCAGACAACAACATA+AGG | 0.529651 | 8_1:+84250597 | None:intergenic |
| ATAACCATAATCATGAAGAA+AGG | 0.541869 | 8_1:-84253371 | None:intergenic |
| GTTGTCTGTTGCCTTGATTG+GGG | 0.546283 | 8_1:+84251997 | None:intergenic |
| GAAAGTTGTTGGAAAGGAAA+CGG | 0.552852 | 8_1:-84251945 | Msa1220870:CDS |
| ATGGCAGAAAGATAAGGCTC+TGG | 0.553100 | 8_1:+84250483 | None:intergenic |
| TTGTCTGTTGCCTTGATTGG+GGG | 0.562435 | 8_1:+84251998 | None:intergenic |
| GTACATGGATGGAGGCTCCA+TGG | 0.563515 | 8_1:-84250535 | Msa1220870:CDS |
| GAAAGTGGAACGTTTAAGGA+TGG | 0.577425 | 8_1:-84253173 | Msa1220870:CDS |
| TATTGTTGTAGGACTGAAAG+TGG | 0.590813 | 8_1:-84253188 | Msa1220870:intron |
| TTGGAAAGGAAACGGAGGGG+TGG | 0.595345 | 8_1:-84251937 | Msa1220870:CDS |
| GTTGTTGGAAAGGAAACGGA+GGG | 0.599019 | 8_1:-84251941 | Msa1220870:CDS |
| TACCAGTCATTCTATGACAA+CGG | 0.601232 | 8_1:-84250579 | Msa1220870:CDS |
| TTTCTTCAGAAGATCAGCCA+TGG | 0.606470 | 8_1:+84250518 | None:intergenic |
| AGTTGTTGGAAAGGAAACGG+AGG | 0.614607 | 8_1:-84251942 | Msa1220870:CDS |
| GATCTGCTTGTTAACAGAGA+CGG | 0.623769 | 8_1:-84253149 | Msa1220870:CDS |
| TTGTTGGAAAGGAAACGGAG+GGG | 0.765513 | 8_1:-84251940 | Msa1220870:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTTTAAAAATAGATGTTA+TGG | - | chr8_1:84251383-84251402 | Msa1220870:intron | 10.0% |
| !!! | TATTAGCTTTTCTTATAAAA+AGG | - | chr8_1:84250802-84250821 | Msa1220870:intron | 15.0% |
| !!! | ATTAGCTTTTCTTATAAAAA+GGG | - | chr8_1:84250803-84250822 | Msa1220870:intron | 15.0% |
| !!! | ATCAGATATATTTTTTTACA+CGG | - | chr8_1:84250998-84251017 | Msa1220870:intron | 15.0% |
| !! | AAAAAGAAAAACGTAAAAAA+GGG | + | chr8_1:84251270-84251289 | None:intergenic | 15.0% |
| !! | AAAAAAGAAAAACGTAAAAA+AGG | + | chr8_1:84251271-84251290 | None:intergenic | 15.0% |
| !!! | TATCAGATGAATAATTTTTT+AGG | + | chr8_1:84251662-84251681 | None:intergenic | 15.0% |
| !!! | CTTCGTATTTTATTTTTATT+AGG | - | chr8_1:84252212-84252231 | Msa1220870:intron | 15.0% |
| !!! | AAAATTTGTTTATAAGTGAT+GGG | - | chr8_1:84252278-84252297 | Msa1220870:intron | 15.0% |
| !! | TTCAATTAAATACAATTCAA+AGG | + | chr8_1:84252629-84252648 | None:intergenic | 15.0% |
| !!! | CATTTCTCTTTTTTTTTTCA+TGG | - | chr8_1:84250747-84250766 | Msa1220870:intron | 20.0% |
| !!! | TTAGCTTTTCTTATAAAAAG+GGG | - | chr8_1:84250804-84250823 | Msa1220870:intron | 20.0% |
| !! | TCTGTTCTTACTTATTATTT+GGG | - | chr8_1:84250904-84250923 | Msa1220870:intron | 20.0% |
| !! | AAAAGAAAAACGTAAAAAAG+GGG | + | chr8_1:84251269-84251288 | None:intergenic | 20.0% |
| !! | TTTATAAAAGCAGAATAGAT+TGG | - | chr8_1:84251576-84251595 | Msa1220870:intron | 20.0% |
| !! | TTATAATAGGAATCAATTCT+TGG | + | chr8_1:84251631-84251650 | None:intergenic | 20.0% |
| !!! | TAATCAGTTTTTTGCATTAA+AGG | - | chr8_1:84251943-84251962 | Msa1220870:CDS | 20.0% |
| !!! | TCTGATTTATGCTTTTTTAT+TGG | - | chr8_1:84252027-84252046 | Msa1220870:intron | 20.0% |
| !!! | TCACTTATAAACAAATTTTC+AGG | + | chr8_1:84252277-84252296 | None:intergenic | 20.0% |
| !!! | GAAAATTTGTTTATAAGTGA+TGG | - | chr8_1:84252277-84252296 | Msa1220870:intron | 20.0% |
| !! | ATATAACCTGAAAATTAGTA+TGG | - | chr8_1:84252468-84252487 | Msa1220870:intron | 20.0% |
| !! | ATAACAATCAACTAAATACA+CGG | + | chr8_1:84252541-84252560 | None:intergenic | 20.0% |
| !!! | AAGTAAGTTTTTAACATTGA+GGG | + | chr8_1:84252817-84252836 | None:intergenic | 20.0% |
| !! | ATGTTAAAAACTTACTTCTT+TGG | - | chr8_1:84252820-84252839 | Msa1220870:intron | 20.0% |
| !!! | ATTTAAAATAGCTAGAAACA+GGG | + | chr8_1:84252917-84252936 | None:intergenic | 20.0% |
| !!! | AATTTAAAATAGCTAGAAAC+AGG | + | chr8_1:84252918-84252937 | None:intergenic | 20.0% |
| !!! | ATTTTTCTAATAGTAGCTAT+TGG | - | chr8_1:84253022-84253041 | Msa1220870:intron | 20.0% |
| !!! | AATTTTGAAATTTTGACGTG+TGG | - | chr8_1:84250620-84250639 | Msa1220870:CDS | 25.0% |
| !!! | ATTTTGAAATTTTGACGTGT+GGG | - | chr8_1:84250621-84250640 | Msa1220870:CDS | 25.0% |
| !! | TTATTGTCTGTTTCATCTTT+TGG | - | chr8_1:84250771-84250790 | Msa1220870:intron | 25.0% |
| ! | CTCTGTTCTTACTTATTATT+TGG | - | chr8_1:84250903-84250922 | Msa1220870:intron | 25.0% |
| !!! | TGCAAATTGTTGTCTTTTTT+AGG | - | chr8_1:84250938-84250957 | Msa1220870:intron | 25.0% |
| !!! | GCAAATTGTTGTCTTTTTTA+GGG | - | chr8_1:84250939-84250958 | Msa1220870:intron | 25.0% |
| !!! | ATTGTTATTTAGCACAAGAA+TGG | - | chr8_1:84251059-84251078 | Msa1220870:intron | 25.0% |
| !!! | TTACGTTTTTCTTTTTTAGC+TGG | - | chr8_1:84251274-84251293 | Msa1220870:intron | 25.0% |
| !!! | TACGTTTTTCTTTTTTAGCT+GGG | - | chr8_1:84251275-84251294 | Msa1220870:intron | 25.0% |
| ! | TAGCAAAACTTACAAGTTTA+TGG | + | chr8_1:84251483-84251502 | None:intergenic | 25.0% |
| ! | TTAGGTGATTCACTTATAAT+AGG | + | chr8_1:84251644-84251663 | None:intergenic | 25.0% |
| ! | TTCTGACAATATGTTATGTA+TGG | - | chr8_1:84251777-84251796 | Msa1220870:intron | 25.0% |
| ! | TATCTCATTCAATGTTATGT+GGG | + | chr8_1:84252251-84252270 | None:intergenic | 25.0% |
| ! | ATATCTCATTCAATGTTATG+TGG | + | chr8_1:84252252-84252271 | None:intergenic | 25.0% |
| ! | ACATAACATTGAATGAGATA+TGG | - | chr8_1:84252251-84252270 | Msa1220870:intron | 25.0% |
| !! | ATTCAACCATACTAATTTTC+AGG | + | chr8_1:84252477-84252496 | None:intergenic | 25.0% |
| !!! | AATATGACGTTCTAAGATAA+TGG | + | chr8_1:84252586-84252605 | None:intergenic | 25.0% |
| ! | AATATATATACAAGATCCGA+GGG | + | chr8_1:84252678-84252697 | None:intergenic | 25.0% |
| ! | AAATATATATACAAGATCCG+AGG | + | chr8_1:84252679-84252698 | None:intergenic | 25.0% |
| !! | AGTAAGTTTTTAACATTGAG+GGG | + | chr8_1:84252816-84252835 | None:intergenic | 25.0% |
| !! | GAAGTAAGTTTTTAACATTG+AGG | + | chr8_1:84252818-84252837 | None:intergenic | 25.0% |
| !! | TTTAAAATAGCTAGAAACAG+GGG | + | chr8_1:84252916-84252935 | None:intergenic | 25.0% |
| ! | CAATTATGAAGAATGCATAA+GGG | + | chr8_1:84253134-84253153 | None:intergenic | 25.0% |
| ! | TCAATTATGAAGAATGCATA+AGG | + | chr8_1:84253135-84253154 | None:intergenic | 25.0% |
| !!! | ATCAATCATTTTAGAGTACA+TGG | - | chr8_1:84253282-84253301 | Msa1220870:intron | 25.0% |
| ! | TTGAGATTTTCATACCCAAT+TGG | - | chr8_1:84250856-84250875 | Msa1220870:intron | 30.0% |
| ! | TGAGATTTTCATACCCAATT+GGG | - | chr8_1:84250857-84250876 | Msa1220870:intron | 30.0% |
| CAAACTAAAATTCCCCAATT+GGG | + | chr8_1:84250873-84250892 | None:intergenic | 30.0% | |
| TATGTTTGGATCGATGATAT+AGG | - | chr8_1:84251326-84251345 | Msa1220870:intron | 30.0% | |
| ATGTTTGGATCGATGATATA+GGG | - | chr8_1:84251327-84251346 | Msa1220870:intron | 30.0% | |
| TGAAATGGTATGAAATAGTC+TGG | - | chr8_1:84251356-84251375 | Msa1220870:intron | 30.0% | |
| ! | AAGTTTATGGTGGAAACATA+GGG | + | chr8_1:84251470-84251489 | None:intergenic | 30.0% |
| CAAAACTTACAAGTTTATGG+TGG | + | chr8_1:84251480-84251499 | None:intergenic | 30.0% | |
| TATACATGAACATGTTAACG+AGG | - | chr8_1:84251604-84251623 | Msa1220870:intron | 30.0% | |
| !!! | ATTGGTCCTGCTTTATTTTT+TGG | - | chr8_1:84251731-84251750 | Msa1220870:intron | 30.0% |
| ATGTGACCAAAAAATAAAGC+AGG | + | chr8_1:84251740-84251759 | None:intergenic | 30.0% | |
| TTTGGTCACATTACATGTAT+TGG | - | chr8_1:84251749-84251768 | Msa1220870:intron | 30.0% | |
| TTGGTCACATTACATGTATT+GGG | - | chr8_1:84251750-84251769 | Msa1220870:intron | 30.0% | |
| ATAGACATAGTGAAAGTTGT+TGG | - | chr8_1:84251876-84251895 | Msa1220870:intron | 30.0% | |
| TGATATTATGCTTACAGGTA+TGG | + | chr8_1:84252070-84252089 | None:intergenic | 30.0% | |
| AGGAATGATATTATGCTTAC+AGG | + | chr8_1:84252075-84252094 | None:intergenic | 30.0% | |
| TGTTAAGGTAGAGCAAAATT+AGG | + | chr8_1:84252095-84252114 | None:intergenic | 30.0% | |
| TACCTTAACACCAATTAAGT+TGG | - | chr8_1:84252105-84252124 | Msa1220870:intron | 30.0% | |
| ACCTTAACACCAATTAAGTT+GGG | - | chr8_1:84252106-84252125 | Msa1220870:intron | 30.0% | |
| AGAGCTTATAAAACATCCAT+TGG | - | chr8_1:84252357-84252376 | Msa1220870:intron | 30.0% | |
| GAGCTTATAAAACATCCATT+GGG | - | chr8_1:84252358-84252377 | Msa1220870:intron | 30.0% | |
| !!! | GATTGTTATTTTGTTGCATG+TGG | - | chr8_1:84252552-84252571 | Msa1220870:intron | 30.0% |
| ATCAAACTTAAACGAGAGTA+TGG | - | chr8_1:84252729-84252748 | Msa1220870:intron | 30.0% | |
| ! | TCAAACTTAAACGAGAGTAT+GGG | - | chr8_1:84252730-84252749 | Msa1220870:intron | 30.0% |
| TCCGAAACTAAAAGGAAAAA+GGG | + | chr8_1:84252853-84252872 | None:intergenic | 30.0% | |
| TTCCGAAACTAAAAGGAAAA+AGG | + | chr8_1:84252854-84252873 | None:intergenic | 30.0% | |
| AAACAGGGGAATATCAATAT+GGG | + | chr8_1:84252902-84252921 | None:intergenic | 30.0% | |
| GTTGTTGTGTATCAGATAAA+AGG | + | chr8_1:84253069-84253088 | None:intergenic | 30.0% | |
| !!! | ATCATTTTAGAGTACATGGA+TGG | - | chr8_1:84253286-84253305 | Msa1220870:intron | 30.0% |
| TTACAAATGGCAGAAAGATA+AGG | + | chr8_1:84253358-84253377 | None:intergenic | 30.0% | |
| AAGAAAGGAAATTTGGGTCT+CGG | - | chr8_1:84250476-84250495 | Msa1220870:CDS | 35.0% | |
| AAAGCAACTTGATCAGTTTG+AGG | + | chr8_1:84250518-84250537 | None:intergenic | 35.0% | |
| TATTGTTGTAGGACTGAAAG+TGG | - | chr8_1:84250644-84250663 | Msa1220870:CDS | 35.0% | |
| ! | GAGATTTTCATACCCAATTG+GGG | - | chr8_1:84250858-84250877 | Msa1220870:intron | 35.0% |
| CCAAACTAAAATTCCCCAAT+TGG | + | chr8_1:84250874-84250893 | None:intergenic | 35.0% | |
| !!! | CCAATTGGGGAATTTTAGTT+TGG | - | chr8_1:84250871-84250890 | Msa1220870:intron | 35.0% |
| !!! | ATTGGGGAATTTTAGTTTGG+TGG | - | chr8_1:84250874-84250893 | Msa1220870:intron | 35.0% |
| !!! | TTGGGGAATTTTAGTTTGGT+GGG | - | chr8_1:84250875-84250894 | Msa1220870:intron | 35.0% |
| CATAAGTCATTCACTAGATG+AGG | - | chr8_1:84251119-84251138 | Msa1220870:intron | 35.0% | |
| ! | CACAGAAACAATGTTTGTTG+TGG | - | chr8_1:84251201-84251220 | Msa1220870:intron | 35.0% |
| AGAAAAACGTAAAAAAGGGG+AGG | + | chr8_1:84251266-84251285 | None:intergenic | 35.0% | |
| !!! | TTTTTAGCTGGGATTTTCGA+AGG | - | chr8_1:84251286-84251305 | Msa1220870:intron | 35.0% |
| CACAACTGCACAATATGTTT+GGG | + | chr8_1:84251434-84251453 | None:intergenic | 35.0% | |
| ACACAACTGCACAATATGTT+TGG | + | chr8_1:84251435-84251454 | None:intergenic | 35.0% | |
| ! | CAAGTTTATGGTGGAAACAT+AGG | + | chr8_1:84251471-84251490 | None:intergenic | 35.0% |
| AATCATACCGAAAACCACAA+TGG | + | chr8_1:84251692-84251711 | None:intergenic | 35.0% | |
| ! | TTGTGGTTTTCGGTATGATT+AGG | - | chr8_1:84251692-84251711 | Msa1220870:intron | 35.0% |
| ! | TGTGGTTTTCGGTATGATTA+GGG | - | chr8_1:84251693-84251712 | Msa1220870:intron | 35.0% |
| AACAGACAACCAGTTAAGTT+TGG | - | chr8_1:84251848-84251867 | Msa1220870:intron | 35.0% | |
| CATAGTGAAAGTTGTTGGAA+AGG | - | chr8_1:84251881-84251900 | Msa1220870:intron | 35.0% | |
| GAAAGTTGTTGGAAAGGAAA+CGG | - | chr8_1:84251887-84251906 | Msa1220870:intron | 35.0% | |
| TTCAATTGGTGCAACACAAA+TGG | - | chr8_1:84251918-84251937 | Msa1220870:CDS | 35.0% | |
| CACTTTAGTGACACAAAACA+TGG | + | chr8_1:84252157-84252176 | None:intergenic | 35.0% | |
| ! | AACGTCTTAGAATCTGAGAT+GGG | + | chr8_1:84252334-84252353 | None:intergenic | 35.0% |
| TAACGTCTTAGAATCTGAGA+TGG | + | chr8_1:84252335-84252354 | None:intergenic | 35.0% | |
| ATGTGTCAAGAGTTACACAT+CGG | - | chr8_1:84252440-84252459 | Msa1220870:intron | 35.0% | |
| CTCGTCTTAGAATTTGGATT+GGG | + | chr8_1:84252504-84252523 | None:intergenic | 35.0% | |
| ACTCGTCTTAGAATTTGGAT+TGG | + | chr8_1:84252505-84252524 | None:intergenic | 35.0% | |
| GAATGACTCGTCTTAGAATT+TGG | + | chr8_1:84252510-84252529 | None:intergenic | 35.0% | |
| ! | GAACGTCATATTTCTGTTCA+CGG | - | chr8_1:84252594-84252613 | Msa1220870:intron | 35.0% |
| ! | TATTTCTGTTCACGGAACTT+TGG | - | chr8_1:84252602-84252621 | Msa1220870:intron | 35.0% |
| ! | TTCAGATGACATTTTCACCA+AGG | - | chr8_1:84252776-84252795 | Msa1220870:intron | 35.0% |
| ! | AGTTTTTAACATTGAGGGGT+GGG | + | chr8_1:84252812-84252831 | None:intergenic | 35.0% |
| ! | AAGTTTTTAACATTGAGGGG+TGG | + | chr8_1:84252813-84252832 | None:intergenic | 35.0% |
| GAAACTAAAAGGAAAAAGGG+GGG | + | chr8_1:84252850-84252869 | None:intergenic | 35.0% | |
| CGAAACTAAAAGGAAAAAGG+GGG | + | chr8_1:84252851-84252870 | None:intergenic | 35.0% | |
| CCGAAACTAAAAGGAAAAAG+GGG | + | chr8_1:84252852-84252871 | None:intergenic | 35.0% | |
| !!! | CCCCTTTTTCCTTTTAGTTT+CGG | - | chr8_1:84252849-84252868 | Msa1220870:intron | 35.0% |
| GAAACAGGGGAATATCAATA+TGG | + | chr8_1:84252903-84252922 | None:intergenic | 35.0% | |
| TCCTAGTATATGAGCTTGAA+AGG | - | chr8_1:84252980-84252999 | Msa1220870:intron | 35.0% | |
| CCTAGTATATGAGCTTGAAA+GGG | - | chr8_1:84252981-84253000 | Msa1220870:intron | 35.0% | |
| TACCAGTCATTCTATGACAA+CGG | - | chr8_1:84253253-84253272 | Msa1220870:intron | 35.0% | |
| !!! | ATTTTAGAGTACATGGATGG+AGG | - | chr8_1:84253289-84253308 | Msa1220870:intron | 35.0% |
| GACTGAAAGTGGAACGTTTA+AGG | - | chr8_1:84250655-84250674 | Msa1220870:CDS | 40.0% | |
| GAAAGTGGAACGTTTAAGGA+TGG | - | chr8_1:84250659-84250678 | Msa1220870:intron | 40.0% | |
| ! | GATCTGCTTGTTAACAGAGA+CGG | - | chr8_1:84250683-84250702 | Msa1220870:intron | 40.0% |
| TTGGATCGATGATATAGGGA+TGG | - | chr8_1:84251331-84251350 | Msa1220870:intron | 40.0% | |
| GATATAGGGATGGAGTGAAA+TGG | - | chr8_1:84251341-84251360 | Msa1220870:intron | 40.0% | |
| ! | ACAATATGTTTGGGATGGAG+TGG | + | chr8_1:84251425-84251444 | None:intergenic | 40.0% |
| ACTGCACAATATGTTTGGGA+TGG | + | chr8_1:84251430-84251449 | None:intergenic | 40.0% | |
| ATTGAAGCAATGCAGTAGTG+AGG | + | chr8_1:84251522-84251541 | None:intergenic | 40.0% | |
| ! | TTTTCGGTATGATTAGGGCA+AGG | - | chr8_1:84251698-84251717 | Msa1220870:intron | 40.0% |
| CTATGTCTGCCAAACTTAAC+TGG | + | chr8_1:84251860-84251879 | None:intergenic | 40.0% | |
| GAAGATACAAAGTCACAGCA+AGG | + | chr8_1:84251991-84252010 | None:intergenic | 40.0% | |
| !! | GCCCAACTTAATTGGTGTTA+AGG | + | chr8_1:84252110-84252129 | None:intergenic | 40.0% |
| !! | AACACCAATTAAGTTGGGCA+AGG | - | chr8_1:84252111-84252130 | Msa1220870:intron | 40.0% |
| ATGTCCTTGCCCAACTTAAT+TGG | + | chr8_1:84252118-84252137 | None:intergenic | 40.0% | |
| ACACAAAACATGGACAAGAC+AGG | + | chr8_1:84252147-84252166 | None:intergenic | 40.0% | |
| ! | GTTTTTAACATTGAGGGGTG+GGG | + | chr8_1:84252811-84252830 | None:intergenic | 40.0% |
| GCTCTACTTCCGAAACTAAA+AGG | + | chr8_1:84252861-84252880 | None:intergenic | 40.0% | |
| CCCTTTCAAGCTCATATACT+AGG | + | chr8_1:84252984-84253003 | None:intergenic | 40.0% | |
| GGACGTACAAGATAGCATTA+AGG | + | chr8_1:84253091-84253110 | None:intergenic | 40.0% | |
| TGGTAGCAGACAACAACATA+AGG | + | chr8_1:84253238-84253257 | None:intergenic | 40.0% | |
| TTTCTTCAGAAGATCAGCCA+TGG | + | chr8_1:84253317-84253336 | None:intergenic | 40.0% | |
| ! | TGACGTGTGGGTATTGTTGT+AGG | - | chr8_1:84250633-84250652 | Msa1220870:CDS | 45.0% |
| ! | CTGGCTTCTAAGGGTATGTT+TGG | - | chr8_1:84251312-84251331 | Msa1220870:intron | 45.0% |
| TACCGAAAACCACAATGGCT+GGG | + | chr8_1:84251687-84251706 | None:intergenic | 45.0% | |
| ATACCGAAAACCACAATGGC+TGG | + | chr8_1:84251688-84251707 | None:intergenic | 45.0% | |
| TTGTCTGTTGCCTTGATTGG+GGG | + | chr8_1:84251837-84251856 | None:intergenic | 45.0% | |
| GTTGTCTGTTGCCTTGATTG+GGG | + | chr8_1:84251838-84251857 | None:intergenic | 45.0% | |
| GGTTGTCTGTTGCCTTGATT+GGG | + | chr8_1:84251839-84251858 | None:intergenic | 45.0% | |
| TGGTTGTCTGTTGCCTTGAT+TGG | + | chr8_1:84251840-84251859 | None:intergenic | 45.0% | |
| AGTTGTTGGAAAGGAAACGG+AGG | - | chr8_1:84251890-84251909 | Msa1220870:intron | 45.0% | |
| GTTGTTGGAAAGGAAACGGA+GGG | - | chr8_1:84251891-84251910 | Msa1220870:intron | 45.0% | |
| TTGTTGGAAAGGAAACGGAG+GGG | - | chr8_1:84251892-84251911 | Msa1220870:intron | 45.0% | |
| TGCTTACAGGTATGGAGTGT+GGG | + | chr8_1:84252062-84252081 | None:intergenic | 45.0% | |
| ATGCTTACAGGTATGGAGTG+TGG | + | chr8_1:84252063-84252082 | None:intergenic | 45.0% | |
| TGGGAAGTCCTCACCTAATA+CGG | - | chr8_1:84252297-84252316 | Msa1220870:intron | 45.0% | |
| AACTCAACCCGTATTAGGTG+AGG | + | chr8_1:84252308-84252327 | None:intergenic | 45.0% | |
| GGTCTAACTCAACCCGTATT+AGG | + | chr8_1:84252313-84252332 | None:intergenic | 45.0% | |
| CTAAAAGGAAAAAGGGGGGA+TGG | + | chr8_1:84252846-84252865 | None:intergenic | 45.0% | |
| TTTAGCTATCTGCTTGCGCA+CGG | + | chr8_1:84253185-84253204 | None:intergenic | 45.0% | |
| CACCGTTGTCATAGAATGAC+TGG | + | chr8_1:84253258-84253277 | None:intergenic | 45.0% | |
| ATGGCAGAAAGATAAGGCTC+TGG | + | chr8_1:84253352-84253371 | None:intergenic | 45.0% | |
| ! | CTGGGATTTTCGAAGGTTGC+TGG | - | chr8_1:84251293-84251312 | Msa1220870:intron | 50.0% |
| !! | TCGAAGGTTGCTGGCTTCTA+AGG | - | chr8_1:84251302-84251321 | Msa1220870:intron | 50.0% |
| !! | CGAAGGTTGCTGGCTTCTAA+GGG | - | chr8_1:84251303-84251322 | Msa1220870:intron | 50.0% |
| TCTGATAACCCCAGCCATTG+TGG | - | chr8_1:84251675-84251694 | Msa1220870:intron | 50.0% | |
| ! | ACCCCAGCCATTGTGGTTTT+CGG | - | chr8_1:84251682-84251701 | Msa1220870:intron | 50.0% |
| ACCGAAAACCACAATGGCTG+GGG | + | chr8_1:84251686-84251705 | None:intergenic | 50.0% | |
| TCGGTATGATTAGGGCAAGG+AGG | - | chr8_1:84251701-84251720 | Msa1220870:intron | 50.0% | |
| GGGCAAGGAGGTTTGATCAT+TGG | - | chr8_1:84251713-84251732 | Msa1220870:intron | 50.0% | |
| ! | TTTTCAGCCACCCCCAATCA+AGG | - | chr8_1:84251824-84251843 | Msa1220870:intron | 50.0% |
| AAACGGAGGGGTGGTTCAAT+TGG | - | chr8_1:84251904-84251923 | Msa1220870:intron | 50.0% | |
| GGGAAGTCCTCACCTAATAC+GGG | - | chr8_1:84252298-84252317 | Msa1220870:intron | 50.0% | |
| TCCATTGGGTCACCCACTAT+CGG | - | chr8_1:84252372-84252391 | Msa1220870:intron | 50.0% | |
| ACACTGTAGATATCCAGCCC+TGG | - | chr8_1:84252407-84252426 | Msa1220870:intron | 50.0% | |
| CACTGTAGATATCCAGCCCT+GGG | - | chr8_1:84252408-84252427 | Msa1220870:intron | 50.0% | |
| TAGACAGAGCTCTCATCCCT+CGG | - | chr8_1:84252659-84252678 | Msa1220870:intron | 50.0% | |
| ACGTCCATTCCACCTTGTTC+TGG | - | chr8_1:84253105-84253124 | Msa1220870:intron | 50.0% | |
| GACACCAGAACAAGGTGGAA+TGG | + | chr8_1:84253112-84253131 | None:intergenic | 50.0% | |
| TAAGGGACACCAGAACAAGG+TGG | + | chr8_1:84253117-84253136 | None:intergenic | 50.0% | |
| GCATAAGGGACACCAGAACA+AGG | + | chr8_1:84253120-84253139 | None:intergenic | 50.0% | |
| TCTGTTGCCTTGATTGGGGG+TGG | + | chr8_1:84251834-84251853 | None:intergenic | 55.0% | |
| TTGGAAAGGAAACGGAGGGG+TGG | - | chr8_1:84251895-84251914 | Msa1220870:intron | 55.0% | |
| CCATTGGGTCACCCACTATC+GGG | - | chr8_1:84252373-84252392 | Msa1220870:intron | 55.0% | |
| CATTGGGTCACCCACTATCG+GGG | - | chr8_1:84252374-84252393 | Msa1220870:intron | 55.0% | |
| ATATCCAGCCCTGGGCATGA+GGG | - | chr8_1:84252416-84252435 | Msa1220870:intron | 55.0% | |
| GGGTGGGGAATTGACAACCT+TGG | + | chr8_1:84252796-84252815 | None:intergenic | 55.0% | |
| GTACATGGATGGAGGCTCCA+TGG | - | chr8_1:84253297-84253316 | Msa1220870:intron | 55.0% | |
| !! | CCCGATAGTGGGTGACCCAA+TGG | + | chr8_1:84252376-84252395 | None:intergenic | 60.0% |
| ! | TCACCCACTATCGGGGCACT+CGG | - | chr8_1:84252381-84252400 | Msa1220870:intron | 60.0% |
| GATATCCAGCCCTGGGCATG+AGG | - | chr8_1:84252415-84252434 | Msa1220870:intron | 60.0% | |
| TATCCAGCCCTGGGCATGAG+GGG | - | chr8_1:84252417-84252436 | Msa1220870:intron | 60.0% | |
| GACACATCCCCTCATGCCCA+GGG | + | chr8_1:84252427-84252446 | None:intergenic | 60.0% | |
| TGACACATCCCCTCATGCCC+AGG | + | chr8_1:84252428-84252447 | None:intergenic | 60.0% | |
| ! | CACCCACTATCGGGGCACTC+GGG | - | chr8_1:84252382-84252401 | Msa1220870:intron | 65.0% |
| GACCCGAGTGCCCCGATAGT+GGG | + | chr8_1:84252387-84252406 | None:intergenic | 65.0% | |
| TGACCCGAGTGCCCCGATAG+TGG | + | chr8_1:84252388-84252407 | None:intergenic | 65.0% | |
| CATCCCCTCATGCCCAGGGC+TGG | + | chr8_1:84252423-84252442 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 84250473 | 84253381 | 84250473 | ID=Msa1220870;Name=Msa1220870 |
| chr8_1 | mRNA | 84250473 | 84253381 | 84250473 | ID=Msa1220870-mRNA-1;Parent=Msa1220870;Name=Msa1220870-mRNA-1;_AED=0.17;_eAED=0.28;_QI=0|0|0|1|0.66|0.5|4|0|161 |
| chr8_1 | exon | 84253305 | 84253381 | 84253305 | ID=Msa1220870-mRNA-1:exon:30236;Parent=Msa1220870-mRNA-1 |
| chr8_1 | exon | 84253115 | 84253199 | 84253115 | ID=Msa1220870-mRNA-1:exon:30235;Parent=Msa1220870-mRNA-1 |
| chr8_1 | exon | 84251906 | 84252023 | 84251906 | ID=Msa1220870-mRNA-1:exon:30234;Parent=Msa1220870-mRNA-1 |
| chr8_1 | exon | 84250473 | 84250675 | 84250473 | ID=Msa1220870-mRNA-1:exon:30233;Parent=Msa1220870-mRNA-1 |
| chr8_1 | CDS | 84253305 | 84253381 | 84253305 | ID=Msa1220870-mRNA-1:cds;Parent=Msa1220870-mRNA-1 |
| chr8_1 | CDS | 84253115 | 84253199 | 84253115 | ID=Msa1220870-mRNA-1:cds;Parent=Msa1220870-mRNA-1 |
| chr8_1 | CDS | 84251906 | 84252023 | 84251906 | ID=Msa1220870-mRNA-1:cds;Parent=Msa1220870-mRNA-1 |
| chr8_1 | CDS | 84250473 | 84250675 | 84250473 | ID=Msa1220870-mRNA-1:cds;Parent=Msa1220870-mRNA-1 |
| Gene Sequence |
| Protein sequence |
