Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1262130 | XP_003609258.1 | 93.207 | 736 | 48 | 1 | 1 | 736 | 1 | 734 | 0.0 | 1384 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1262130 | G7JV99 | 93.207 | 736 | 48 | 1 | 1 | 736 | 1 | 734 | 0.0 | 1384 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0008850 | Msa1262130 | 0.822086 | 2.859727e-53 | -8.615850e-47 |
| Msa0040190 | Msa1262130 | 0.822291 | 2.563117e-53 | -8.615850e-47 |
| Msa0047470 | Msa1262130 | 0.809208 | 2.120148e-50 | -8.615850e-47 |
| Msa0057740 | Msa1262130 | 0.811737 | 6.028895e-51 | -8.615850e-47 |
| Msa0087110 | Msa1262130 | 0.801815 | 7.536821e-49 | -8.615850e-47 |
| Msa0103060 | Msa1262130 | 0.830701 | 2.531929e-55 | -8.615850e-47 |
| Msa0617370 | Msa1262130 | 0.817271 | 3.595158e-52 | -8.615850e-47 |
| Msa0621890 | Msa1262130 | 0.810687 | 1.018403e-50 | -8.615850e-47 |
| Msa0622390 | Msa1262130 | 0.820701 | 5.968437e-53 | -8.615850e-47 |
| Msa0656270 | Msa1262130 | 0.809604 | 1.743474e-50 | -8.615850e-47 |
| Msa0697140 | Msa1262130 | 0.838755 | 2.381703e-57 | -8.615850e-47 |
| Msa0700070 | Msa1262130 | 0.801813 | 7.542909e-49 | -8.615850e-47 |
| Msa0723140 | Msa1262130 | 0.801389 | 9.214781e-49 | -8.615850e-47 |
| Msa0724050 | Msa1262130 | 0.802632 | 5.116472e-49 | -8.615850e-47 |
| Msa0733000 | Msa1262130 | 0.810934 | 9.006429e-51 | -8.615850e-47 |
| Msa0739610 | Msa1262130 | 0.827781 | 1.294115e-54 | -8.615850e-47 |
| Msa0789270 | Msa1262130 | 0.813210 | 2.872353e-51 | -8.615850e-47 |
| Msa0789280 | Msa1262130 | 0.814120 | 1.811107e-51 | -8.615850e-47 |
| Msa0789290 | Msa1262130 | 0.821946 | 3.081042e-53 | -8.615850e-47 |
| Msa0789300 | Msa1262130 | 0.819402 | 1.183378e-52 | -8.615850e-47 |
| Msa0792170 | Msa1262130 | 0.800065 | 1.716052e-48 | -8.615850e-47 |
| Msa0797220 | Msa1262130 | 0.850095 | 2.119449e-60 | -8.615850e-47 |
| Msa0797620 | Msa1262130 | 0.801956 | 7.050748e-49 | -8.615850e-47 |
| Msa0819670 | Msa1262130 | 0.804262 | 2.350612e-49 | -8.615850e-47 |
| Msa0134550 | Msa1262130 | 0.811840 | 5.724782e-51 | -8.615850e-47 |
| Msa0149500 | Msa1262130 | 0.813711 | 2.228607e-51 | -8.615850e-47 |
| Msa0151690 | Msa1262130 | 0.813982 | 1.942753e-51 | -8.615850e-47 |
| Msa0162030 | Msa1262130 | 0.810483 | 1.127330e-50 | -8.615850e-47 |
| Msa0162050 | Msa1262130 | 0.810614 | 1.055786e-50 | -8.615850e-47 |
| Msa0162070 | Msa1262130 | 0.800111 | 1.680138e-48 | -8.615850e-47 |
| Msa0164360 | Msa1262130 | 0.840588 | 7.942514e-58 | -8.615850e-47 |
| Msa0169960 | Msa1262130 | 0.806110 | 9.644146e-50 | -8.615850e-47 |
| Msa0181290 | Msa1262130 | 0.812919 | 3.327651e-51 | -8.615850e-47 |
| Msa0193650 | Msa1262130 | 0.808613 | 2.842466e-50 | -8.615850e-47 |
| Msa0213650 | Msa1262130 | 0.816384 | 5.684580e-52 | -8.615850e-47 |
| Msa0221800 | Msa1262130 | 0.812362 | 4.405512e-51 | -8.615850e-47 |
| Msa0222120 | Msa1262130 | 0.804688 | 1.915932e-49 | -8.615850e-47 |
| Msa0227290 | Msa1262130 | 0.820522 | 6.562830e-53 | -8.615850e-47 |
| Msa1238700 | Msa1262130 | 0.800036 | 1.740194e-48 | -8.615850e-47 |
| Msa1252230 | Msa1262130 | 0.806750 | 7.068998e-50 | -8.615850e-47 |
| Msa1262130 | Msa1355260 | 0.816017 | 6.869677e-52 | -8.615850e-47 |
| Msa1262130 | Msa1365120 | 0.844601 | 6.833041e-59 | -8.615850e-47 |
| Msa1262130 | Msa1386520 | 0.812710 | 3.696711e-51 | -8.615850e-47 |
| Msa1262130 | Msa1405470 | 0.814939 | 1.193285e-51 | -8.615850e-47 |
| Msa1262130 | Msa1428440 | 0.819065 | 1.412642e-52 | -8.615850e-47 |
| Msa1262130 | Msa1431000 | 0.805513 | 1.287379e-49 | -8.615850e-47 |
| Msa1262130 | Msa1435470 | 0.837710 | 4.425508e-57 | -8.615850e-47 |
| Msa1262130 | Msa1440180 | 0.814559 | 1.448475e-51 | -8.615850e-47 |
| Msa1262130 | Msa1447560 | 0.819348 | 1.217874e-52 | -8.615850e-47 |
| Msa1262130 | Msa1449740 | 0.812665 | 3.781961e-51 | -8.615850e-47 |
| Msa1262130 | Msa1458920 | 0.828037 | 1.123421e-54 | -8.615850e-47 |
| Msa1262130 | Msa1460510 | 0.806743 | 7.094250e-50 | -8.615850e-47 |
| Msa0380430 | Msa1262130 | 0.821667 | 3.574284e-53 | -8.615850e-47 |
| Msa0414070 | Msa1262130 | 0.825903 | 3.635579e-54 | -8.615850e-47 |
| Msa0418000 | Msa1262130 | 0.810708 | 1.007896e-50 | -8.615850e-47 |
| Msa0419620 | Msa1262130 | -0.802094 | 6.602912e-49 | -8.615850e-47 |
| Msa0427050 | Msa1262130 | 0.814625 | 1.400925e-51 | -8.615850e-47 |
| Msa0431250 | Msa1262130 | 0.810681 | 1.021617e-50 | -8.615850e-47 |
| Msa0440110 | Msa1262130 | 0.824935 | 6.165194e-54 | -8.615850e-47 |
| Msa0456480 | Msa1262130 | 0.810100 | 1.363112e-50 | -8.615850e-47 |
| Msa0458790 | Msa1262130 | 0.813367 | 2.652588e-51 | -8.615850e-47 |
| Msa0459120 | Msa1262130 | 0.806749 | 7.070445e-50 | -8.615850e-47 |
| Msa0473450 | Msa1262130 | 0.804470 | 2.127683e-49 | -8.615850e-47 |
| Msa0988500 | Msa1262130 | 0.825505 | 4.518463e-54 | -8.615850e-47 |
| Msa1016110 | Msa1262130 | 0.808211 | 3.461501e-50 | -8.615850e-47 |
| Msa1038320 | Msa1262130 | 0.803401 | 3.548731e-49 | -8.615850e-47 |
| Msa1079610 | Msa1262130 | 0.808473 | 3.043843e-50 | -8.615850e-47 |
| Msa1081850 | Msa1262130 | 0.802652 | 5.068639e-49 | -8.615850e-47 |
| Msa1085960 | Msa1262130 | -0.802356 | 5.833808e-49 | -8.615850e-47 |
| Msa1089530 | Msa1262130 | 0.815658 | 8.256874e-52 | -8.615850e-47 |
| Msa1102180 | Msa1262130 | 0.818695 | 1.714183e-52 | -8.615850e-47 |
| Msa0253980 | Msa1262130 | 0.827040 | 1.948177e-54 | -8.615850e-47 |
| Msa0259330 | Msa1262130 | 0.806595 | 7.622022e-50 | -8.615850e-47 |
| Msa0263620 | Msa1262130 | 0.804385 | 2.215326e-49 | -8.615850e-47 |
| Msa0269360 | Msa1262130 | 0.808627 | 2.822778e-50 | -8.615850e-47 |
| Msa0282860 | Msa1262130 | 0.801992 | 6.928911e-49 | -8.615850e-47 |
| Msa0286790 | Msa1262130 | 0.802943 | 4.412840e-49 | -8.615850e-47 |
| Msa0288380 | Msa1262130 | 0.831527 | 1.587403e-55 | -8.615850e-47 |
| Msa0313990 | Msa1262130 | 0.806917 | 6.516538e-50 | -8.615850e-47 |
| Msa0325470 | Msa1262130 | 0.814289 | 1.662110e-51 | -8.615850e-47 |
| Msa0326670 | Msa1262130 | 0.800750 | 1.244978e-48 | -8.615850e-47 |
| Msa0330270 | Msa1262130 | 0.813473 | 2.514562e-51 | -8.615850e-47 |
| Msa0336270 | Msa1262130 | 0.803123 | 4.051676e-49 | -8.615850e-47 |
| Msa0362430 | Msa1262130 | 0.813139 | 2.977301e-51 | -8.615850e-47 |
| Msa1108530 | Msa1262130 | 0.833581 | 4.911501e-56 | -8.615850e-47 |
| Msa1130650 | Msa1262130 | 0.801114 | 1.049072e-48 | -8.615850e-47 |
| Msa1152280 | Msa1262130 | 0.839069 | 1.974803e-57 | -8.615850e-47 |
| Msa1157160 | Msa1262130 | 0.806876 | 6.647285e-50 | -8.615850e-47 |
| Msa1214210 | Msa1262130 | 0.803651 | 3.148254e-49 | -8.615850e-47 |
| Msa0502910 | Msa1262130 | 0.839237 | 1.786626e-57 | -8.615850e-47 |
| Msa0511720 | Msa1262130 | -0.823346 | 1.455651e-53 | -8.615850e-47 |
| Msa0524050 | Msa1262130 | 0.842122 | 3.136103e-58 | -8.615850e-47 |
| Msa0542040 | Msa1262130 | 0.806454 | 8.160318e-50 | -8.615850e-47 |
| Msa0553520 | Msa1262130 | 0.808283 | 3.341304e-50 | -8.615850e-47 |
| Msa0568490 | Msa1262130 | 0.830164 | 3.425407e-55 | -8.615850e-47 |
| Msa0576990 | Msa1262130 | -0.804576 | 2.021683e-49 | -8.615850e-47 |
| Msa0583940 | Msa1262130 | 0.809692 | 1.668668e-50 | -8.615850e-47 |
| Msa0847200 | Msa1262130 | 0.802468 | 5.530704e-49 | -8.615850e-47 |
| Msa0860270 | Msa1262130 | 0.810371 | 1.191392e-50 | -8.615850e-47 |
| Msa0872660 | Msa1262130 | 0.817087 | 3.954369e-52 | -8.615850e-47 |
| Msa0897390 | Msa1262130 | 0.822527 | 2.258125e-53 | -8.615850e-47 |
| Msa0926800 | Msa1262130 | 0.812544 | 4.018878e-51 | -8.615850e-47 |
| Msa0929400 | Msa1262130 | 0.840852 | 6.772517e-58 | -8.615850e-47 |
| Msa0934830 | Msa1262130 | 0.813723 | 2.215712e-51 | -8.615850e-47 |
| Msa0937940 | Msa1262130 | 0.806377 | 8.473757e-50 | -8.615850e-47 |
| Msa0951720 | Msa1262130 | 0.807474 | 4.966005e-50 | -8.615850e-47 |
| Msa0971860 | Msa1262130 | 0.811932 | 5.465141e-51 | -8.615850e-47 |
| Msa0975080 | Msa1262130 | 0.834135 | 3.570629e-56 | -8.615850e-47 |
| Msa0978000 | Msa1262130 | 0.815526 | 8.838313e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1262130 | MtrunA17_Chr4g0063291 | 93.207 | 736 | 48 | 1 | 1 | 736 | 1 | 734 | 0.0 | 1384 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 159 sgRNAs with CRISPR-Local
Find 228 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCTATTGGTAATCTGTTTC+AGG | 0.184417 | 8_2:+64739225 | Msa1262130:CDS |
| TTTCAAAGGACTACGAAATT+TGG | 0.185735 | 8_2:+64741849 | Msa1262130:three_prime_UTR |
| TGAAGAGAAGCATTTGAATT+TGG | 0.226730 | 8_2:+64739339 | Msa1262130:CDS |
| ATCAAGGCCAGGAAACTTTC+AGG | 0.227868 | 8_2:+64739713 | Msa1262130:CDS |
| ATCTTTCACTTGTATGTTAT+TGG | 0.231088 | 8_2:-64741215 | None:intergenic |
| GATGATAGTAGTAAATTAAA+TGG | 0.231494 | 8_2:+64739364 | Msa1262130:CDS |
| TGAGAAATGAGAAGATTAAT+TGG | 0.232935 | 8_2:-64738476 | None:intergenic |
| TTGCATAGCTTCTTCTTTAC+TGG | 0.241498 | 8_2:-64740199 | None:intergenic |
| ATGTCAGAGCCCTGTATAAT+TGG | 0.248707 | 8_2:+64740310 | Msa1262130:CDS |
| TCGTAGTCCTTTGAAAAGTT+TGG | 0.249579 | 8_2:-64741842 | None:intergenic |
| ATCAGTTTGGTTACAATTGC+TGG | 0.259140 | 8_2:+64741312 | Msa1262130:three_prime_UTR |
| TTCACAATTCAATCACAAAA+TGG | 0.270122 | 8_2:+64738543 | Msa1262130:CDS |
| AACTTCTCCTTACTACTTCC+TGG | 0.283873 | 8_2:-64741139 | None:intergenic |
| AATTCTGAGAGAGAAAATTT+TGG | 0.287099 | 8_2:+64739460 | Msa1262130:CDS |
| CAGAATCAAGCCGGCTTTCA+TGG | 0.297020 | 8_2:-64739624 | None:intergenic |
| TGAGGCTGAAAGAGTATTCT+TGG | 0.297065 | 8_2:+64740657 | Msa1262130:CDS |
| TAAGAATAAGAAGATTAAAA+TGG | 0.299380 | 8_2:+64739024 | Msa1262130:CDS |
| CAATGGCGATTTCTAGGGTT+AGG | 0.304696 | 8_2:+64738753 | Msa1262130:CDS |
| CGTAGTCCTTTGAAAAGTTT+GGG | 0.313185 | 8_2:-64741841 | None:intergenic |
| CAAATATACCTGCTGGTTGC+TGG | 0.314280 | 8_2:-64741363 | None:intergenic |
| AGACAACTTTAGTCAATTCA+TGG | 0.317343 | 8_2:+64741271 | Msa1262130:exon |
| CAGAAGTAGCTCGAAATGTT+AGG | 0.326770 | 8_2:-64738583 | None:intergenic |
| ATTCTTCTCAAGACTCGTTC+AGG | 0.328932 | 8_2:+64739395 | Msa1262130:CDS |
| ATATATAAAGTGCAAATAAA+AGG | 0.332941 | 8_2:-64738280 | None:intergenic |
| AGTGAGAAATTGAAGAGTTT+AGG | 0.333033 | 8_2:+64738938 | Msa1262130:CDS |
| TGTAACCAAACTGATTCTTC+TGG | 0.333640 | 8_2:-64741304 | None:intergenic |
| AAAACGTAGTAGAATAATTA+AGG | 0.334312 | 8_2:+64740158 | Msa1262130:CDS |
| CGGAAACGATCGTGAAAATA+AGG | 0.341119 | 8_2:-64738503 | None:intergenic |
| AGATTTCTTTGATACACATT+TGG | 0.344284 | 8_2:+64741599 | Msa1262130:three_prime_UTR |
| GGAAACACTTATCTTCTTCA+TGG | 0.347881 | 8_2:+64740066 | Msa1262130:CDS |
| TTTGTGCAATGGCGATTTCT+AGG | 0.347927 | 8_2:+64738747 | Msa1262130:CDS |
| AAGCAACTGCTCACGCAAAA+AGG | 0.352337 | 8_2:-64739689 | None:intergenic |
| GCATCTACATCAACTGTCTA+TGG | 0.362918 | 8_2:+64738605 | Msa1262130:CDS |
| TTCAAATGCTTCTCTTCAAC+CGG | 0.364414 | 8_2:-64739334 | None:intergenic |
| TCTTCATACCGAGACCTATC+AGG | 0.367694 | 8_2:-64739763 | None:intergenic |
| ATACGAAGACGCTCTTGATA+TGG | 0.369250 | 8_2:+64741189 | Msa1262130:CDS |
| GGAAAAGTGTAATGGTGTTT+TGG | 0.373094 | 8_2:+64739138 | Msa1262130:CDS |
| AGGCTTTAAGTCCACAGCTT+TGG | 0.380971 | 8_2:-64740016 | None:intergenic |
| AATGCAGCTATCATGAATAT+TGG | 0.398818 | 8_2:+64741558 | Msa1262130:intron |
| GATTTCTTTGATACACATTT+GGG | 0.404653 | 8_2:+64741600 | Msa1262130:three_prime_UTR |
| ACATTCTACAACTATTTGTA+AGG | 0.404793 | 8_2:+64741809 | Msa1262130:three_prime_UTR |
| ATTAAAATGGATGATTTGTA+TGG | 0.407609 | 8_2:+64739037 | Msa1262130:CDS |
| ATGGACAGAAATGGAAGAAT+AGG | 0.411172 | 8_2:+64739433 | Msa1262130:CDS |
| TATCAGATGCTGCAATCTAT+TGG | 0.411506 | 8_2:+64739211 | Msa1262130:CDS |
| TACAGCAGAGATCTCGCTTA+AGG | 0.412812 | 8_2:+64741116 | Msa1262130:CDS |
| TGTCAGAGCCCTGTATAATT+GGG | 0.417133 | 8_2:+64740311 | Msa1262130:CDS |
| GAATGGAAGGAATTATGTTA+AGG | 0.421693 | 8_2:+64739099 | Msa1262130:CDS |
| TAGAAGACCTGAAAGTTTCC+TGG | 0.424733 | 8_2:-64739720 | None:intergenic |
| GAAGTTGAAGTTACTTCAGC+AGG | 0.427912 | 8_2:+64741156 | Msa1262130:CDS |
| AAAGAAAAGAGTATAGTTAC+CGG | 0.428449 | 8_2:+64739521 | Msa1262130:CDS |
| CTCGCCAGCTCAGAAGCTTC+CGG | 0.428655 | 8_2:+64738641 | Msa1262130:CDS |
| AAGAAACAAGTTGGAGAAGC+TGG | 0.428878 | 8_2:+64739187 | Msa1262130:CDS |
| AAGGTGAGTGGAAGTGGAAG+TGG | 0.431628 | 8_2:+64738875 | Msa1262130:CDS |
| CGTGAGCAGTTGCTTAATCA+AGG | 0.434199 | 8_2:+64739697 | Msa1262130:CDS |
| GTGCAAGGCCCCAATTATAC+AGG | 0.434643 | 8_2:-64740320 | None:intergenic |
| CCATAGCATCTCTTTGAAGA+TGG | 0.435236 | 8_2:+64739570 | Msa1262130:CDS |
| AGCTTTGTTCAGATGGGGTA+TGG | 0.435338 | 8_2:+64741090 | Msa1262130:intron |
| TGAACCTCAATCCTTTGTTC+CGG | 0.435438 | 8_2:-64739540 | None:intergenic |
| GTTATCCAGAAGAATCAGTT+TGG | 0.438913 | 8_2:+64741299 | Msa1262130:three_prime_UTR |
| TTTGTAAAGGGTACTTATGA+TGG | 0.439273 | 8_2:+64739949 | Msa1262130:CDS |
| AAATTGCAGCTTTGTTCAGA+TGG | 0.442414 | 8_2:+64741083 | Msa1262130:intron |
| AGAAAATGTGAAGAGGCAAT+TGG | 0.446353 | 8_2:+64739282 | Msa1262130:CDS |
| ATCAACTGTCTATGGTGGTT+GGG | 0.446543 | 8_2:+64738613 | Msa1262130:CDS |
| ATGATAGTAGTAAATTAAAT+GGG | 0.449234 | 8_2:+64739365 | Msa1262130:CDS |
| CTTAAAGCCTATGAGTTTGT+TGG | 0.455199 | 8_2:+64740029 | Msa1262130:CDS |
| ATAAAGTTGTCATCTTTGAA+TGG | 0.455324 | 8_2:+64739082 | Msa1262130:CDS |
| TAGTAAATTAAATGGGAAGT+TGG | 0.455875 | 8_2:+64739372 | Msa1262130:CDS |
| CCACATGTCTGTCACACTGC+TGG | 0.460760 | 8_2:-64739596 | None:intergenic |
| CAAGCAAAAGAGTTTGTAAA+GGG | 0.460977 | 8_2:+64739937 | Msa1262130:CDS |
| AAAGGAACAGTGGGCCTGAT+AGG | 0.461163 | 8_2:+64739749 | Msa1262130:CDS |
| AGGAAACGGTGCTTTGCCTC+CGG | 0.463044 | 8_2:+64739315 | Msa1262130:CDS |
| GGTAGAAGAAAGAAACAAGT+TGG | 0.467933 | 8_2:+64739178 | Msa1262130:CDS |
| CCTACAGCCAACAAACTCAT+AGG | 0.471224 | 8_2:-64740036 | None:intergenic |
| TATTCTTCCAGCTTCTGCTA+TGG | 0.472083 | 8_2:+64738790 | Msa1262130:CDS |
| AGACTATTATATATCTGCCT+TGG | 0.472964 | 8_2:+64741338 | Msa1262130:three_prime_UTR |
| TCAGGTCTTCTATCGACAAA+AGG | 0.473346 | 8_2:+64739731 | Msa1262130:CDS |
| GAATTGTGAAGAAGAAATGA+AGG | 0.474744 | 8_2:-64738530 | None:intergenic |
| CTTTCAATCTATCTCTAGGA+TGG | 0.475515 | 8_2:+64741654 | Msa1262130:three_prime_UTR |
| TTGCAATTGGTTATAGCGTA+GGG | 0.481170 | 8_2:+64738816 | Msa1262130:CDS |
| CTTTAGTCAATTCATGGAAA+GGG | 0.483297 | 8_2:+64741277 | Msa1262130:exon |
| TTTGCAATTGGTTATAGCGT+AGG | 0.484349 | 8_2:+64738815 | Msa1262130:CDS |
| GGTCAATTGATAGCAGATAT+TGG | 0.485601 | 8_2:+64740354 | Msa1262130:CDS |
| GAATTAAAGGTGAGTGGAAG+TGG | 0.487193 | 8_2:+64738869 | Msa1262130:CDS |
| GTGGAAGTGGAAGTAGTTTG+AGG | 0.488186 | 8_2:+64738888 | Msa1262130:CDS |
| AATGGCGATTTCTAGGGTTA+GGG | 0.489600 | 8_2:+64738754 | Msa1262130:CDS |
| CTCAGAGACACACAAGGATA+AGG | 0.489613 | 8_2:-64741239 | None:intergenic |
| ACAAACCGCAATAAGATCTC+AGG | 0.491840 | 8_2:+64741626 | Msa1262130:three_prime_UTR |
| GGTATGAAGAAGATAGAGAT+AGG | 0.491937 | 8_2:+64739776 | Msa1262130:CDS |
| TTGTGCAATGGCGATTTCTA+GGG | 0.499663 | 8_2:+64738748 | Msa1262130:CDS |
| AGTTGTCATCTTTGAATGGA+AGG | 0.500075 | 8_2:+64739086 | Msa1262130:CDS |
| TTGGATCAAACTCGAGGAAA+CGG | 0.500384 | 8_2:+64739301 | Msa1262130:CDS |
| AGTTACTTCAGCAGGCTAAA+CGG | 0.501792 | 8_2:+64741164 | Msa1262130:CDS |
| CTTAAGGCCAGGAAGTAGTA+AGG | 0.502992 | 8_2:+64741132 | Msa1262130:CDS |
| ACAAGCAAAAGAGTTTGTAA+AGG | 0.503743 | 8_2:+64739936 | Msa1262130:CDS |
| TGAAGAGTGCGAAGAGCTAC+TGG | 0.504995 | 8_2:+64740239 | Msa1262130:CDS |
| ATGAATATTGGTTATGTTGG+TGG | 0.506378 | 8_2:+64741570 | Msa1262130:three_prime_UTR |
| AGAAGTAGCTCGAAATGTTA+GGG | 0.507578 | 8_2:-64738582 | None:intergenic |
| AATTGCAGCTTTGTTCAGAT+GGG | 0.508150 | 8_2:+64741084 | Msa1262130:intron |
| TTCTTCTCAAGACTCGTTCA+GGG | 0.509514 | 8_2:+64739396 | Msa1262130:CDS |
| CTTGGGGATTGTTTGTGCAA+TGG | 0.512494 | 8_2:+64738736 | Msa1262130:CDS |
| AGAATCAAGCCGGCTTTCAT+GGG | 0.514482 | 8_2:-64739623 | None:intergenic |
| CATCAACTGTCTATGGTGGT+TGG | 0.516503 | 8_2:+64738612 | Msa1262130:CDS |
| CCATCTTCAAAGAGATGCTA+TGG | 0.520456 | 8_2:-64739570 | None:intergenic |
| GGGGATAATCACAGAAGTGC+TGG | 0.525777 | 8_2:+64739487 | Msa1262130:CDS |
| CTTTGATGAGATTGATGTTG+TGG | 0.528417 | 8_2:+64738967 | Msa1262130:CDS |
| ATCATGAATATTGGTTATGT+TGG | 0.529083 | 8_2:+64741567 | Msa1262130:three_prime_UTR |
| CCTGCTGGTTGCTGGATCCA+AGG | 0.529778 | 8_2:-64741355 | None:intergenic |
| AAGTGGAAGTAGTTTGAGGA+AGG | 0.530466 | 8_2:+64738892 | Msa1262130:CDS |
| GAAGAAGAAATGAAGGGTTA+CGG | 0.530867 | 8_2:-64738523 | None:intergenic |
| TGAACTGAGAAATCTTCTCT+CGG | 0.532743 | 8_2:+64740113 | Msa1262130:CDS |
| CCTTGGATCCAGCAACCAGC+AGG | 0.540386 | 8_2:+64741355 | Msa1262130:three_prime_UTR |
| GGTGCTTTCAATCTATCTCT+AGG | 0.549272 | 8_2:+64741650 | Msa1262130:three_prime_UTR |
| GAACTGAGAAATCTTCTCTC+GGG | 0.552033 | 8_2:+64740114 | Msa1262130:CDS |
| ACTTTAGTCAATTCATGGAA+AGG | 0.554104 | 8_2:+64741276 | Msa1262130:exon |
| GGCCTTGCACTTTCTTTCCG+CGG | 0.554567 | 8_2:+64740333 | Msa1262130:CDS |
| TAATGCTTTCAGAATCAAGC+CGG | 0.555653 | 8_2:-64739633 | None:intergenic |
| TGCAGGAAGAAAGTATAGAC+TGG | 0.557667 | 8_2:+64740266 | Msa1262130:CDS |
| TTGTTGGCTGTAGGACAGCT+AGG | 0.559369 | 8_2:+64740045 | Msa1262130:CDS |
| ACAGTGGGCCTGATAGGTCT+CGG | 0.561636 | 8_2:+64739755 | Msa1262130:CDS |
| TGTGGGAATCCCATGAAAGC+CGG | 0.565558 | 8_2:+64739614 | Msa1262130:CDS |
| GTTACCGGAACAAAGGATTG+AGG | 0.566473 | 8_2:+64739536 | Msa1262130:CDS |
| GTCATCAGCAAGTAATTGAT+CGG | 0.571856 | 8_2:-64739812 | None:intergenic |
| GATAATGAGGAAAAGTGTAA+TGG | 0.573362 | 8_2:+64739130 | Msa1262130:CDS |
| ATTGATAGCAGATATTGGTC+CGG | 0.577392 | 8_2:+64740359 | Msa1262130:CDS |
| CTCACCGGAAGCTTCTGAGC+TGG | 0.577535 | 8_2:-64738645 | None:intergenic |
| GCAGTTGCTTAATCAAGGCC+AGG | 0.578217 | 8_2:+64739702 | Msa1262130:CDS |
| CTATCGACAAAAGGAACAGT+GGG | 0.594453 | 8_2:+64739740 | Msa1262130:CDS |
| GAGTATAGTTACCGGAACAA+AGG | 0.597131 | 8_2:+64739529 | Msa1262130:CDS |
| CCAGCAGTGTGACAGACATG+TGG | 0.599688 | 8_2:+64739596 | Msa1262130:CDS |
| AAAGTGCAAATAAAAGGCTG+TGG | 0.601283 | 8_2:-64738274 | Msa1262120:five_prime_UTR |
| TTTGATGCTATGCTGTTGAA+AGG | 0.601768 | 8_2:+64740694 | Msa1262130:CDS |
| ATTGCAGCTTTGTTCAGATG+GGG | 0.602062 | 8_2:+64741085 | Msa1262130:intron |
| CCTATGAGTTTGTTGGCTGT+AGG | 0.602332 | 8_2:+64740036 | Msa1262130:CDS |
| TAGATATCTCGCTGAAGCAA+CGG | 0.605301 | 8_2:+64739903 | Msa1262130:CDS |
| GAAGAGCTACTGGTAAATGC+AGG | 0.605514 | 8_2:+64740249 | Msa1262130:CDS |
| GGAAATGTTTATGCACCAGA+TGG | 0.610369 | 8_2:+64740715 | Msa1262130:CDS |
| AAATGCTTCTCTTCAACCGG+AGG | 0.610870 | 8_2:-64739331 | None:intergenic |
| GACCGCGGAAAGAAAGTGCA+AGG | 0.613769 | 8_2:-64740335 | None:intergenic |
| GTCAGAGCCCTGTATAATTG+GGG | 0.615040 | 8_2:+64740312 | Msa1262130:CDS |
| AAGTCAGAGAAAATGTGAAG+AGG | 0.615261 | 8_2:+64739275 | Msa1262130:CDS |
| AATTGTGAAGAAGAAATGAA+GGG | 0.615706 | 8_2:-64738529 | None:intergenic |
| CAGCAGTGTGACAGACATGT+GGG | 0.623893 | 8_2:+64739597 | Msa1262130:CDS |
| TTTCAATCTATCTCTAGGAT+GGG | 0.629501 | 8_2:+64741655 | Msa1262130:three_prime_UTR |
| TTGGTTGAGAATCATAAGGG+TGG | 0.637819 | 8_2:+64739157 | Msa1262130:CDS |
| CACCTCCTGAGATCTTATTG+CGG | 0.638273 | 8_2:-64741631 | None:intergenic |
| TCGCAACGAATCAAACTCAC+CGG | 0.640153 | 8_2:-64738660 | None:intergenic |
| TTCGGCGAATTAAAGGTGAG+TGG | 0.646198 | 8_2:+64738863 | Msa1262130:CDS |
| TGCAAGGCCCCAATTATACA+GGG | 0.654637 | 8_2:-64740319 | None:intergenic |
| AGGCAATTGGATCAAACTCG+AGG | 0.661797 | 8_2:+64739295 | Msa1262130:CDS |
| TAAAGTCAGAATGAAACGCG+TGG | 0.665756 | 8_2:+64739654 | Msa1262130:CDS |
| TCTATCGACAAAAGGAACAG+TGG | 0.667466 | 8_2:+64739739 | Msa1262130:CDS |
| AACCGCAATAAGATCTCAGG+AGG | 0.668666 | 8_2:+64741629 | Msa1262130:three_prime_UTR |
| TCTACATCAACTGTCTATGG+TGG | 0.681416 | 8_2:+64738608 | Msa1262130:CDS |
| AAGTTTACTCTCCAAAGCTG+TGG | 0.683375 | 8_2:+64740005 | Msa1262130:CDS |
| AACGTAACGATTCAGAACGA+AGG | 0.691092 | 8_2:-64738408 | None:intergenic |
| TCAATCACAAAATGGACACG+TGG | 0.694248 | 8_2:+64738551 | Msa1262130:CDS |
| ACGACACGTGTTTAACTGTG+CGG | 0.716848 | 8_2:+64738326 | Msa1262130:five_prime_UTR |
| GTTAAGCTCAGAGACACACA+AGG | 0.722979 | 8_2:-64741245 | None:intergenic |
| TATCTGCTATCAATTGACCG+CGG | 0.787018 | 8_2:-64740350 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATATAAAGTGCAAATAAA+AGG | - | chr8_2:64738283-64738302 | None:intergenic | 15.0% |
| !! | TAAGAATAAGAAGATTAAAA+TGG | + | chr8_2:64739024-64739043 | Msa1262130:CDS | 15.0% |
| !! | ATGATAGTAGTAAATTAAAT+GGG | + | chr8_2:64739365-64739384 | Msa1262130:CDS | 15.0% |
| !!! | TCTAAAATGATTGTATAAAT+TGG | + | chr8_2:64740486-64740505 | Msa1262130:intron | 15.0% |
| !!! | ATAATTTGCAACTTATATTA+AGG | - | chr8_2:64740981-64741000 | None:intergenic | 15.0% |
| !! | TAATTCTATGAAAAATCTAT+AGG | - | chr8_2:64741440-64741459 | None:intergenic | 15.0% |
| !! | TAATAAAACAGTGATAATAA+AGG | + | chr8_2:64741485-64741504 | Msa1262130:intron | 15.0% |
| !! | TTGAAAATATAAAGGAAAAA+TGG | - | chr8_2:64741521-64741540 | None:intergenic | 15.0% |
| !! | TGTTAGAATTGAAAATATAA+AGG | - | chr8_2:64741529-64741548 | None:intergenic | 15.0% |
| !!! | ATTAAAATGGATGATTTGTA+TGG | + | chr8_2:64739037-64739056 | Msa1262130:CDS | 20.0% |
| !! | GATGATAGTAGTAAATTAAA+TGG | + | chr8_2:64739364-64739383 | Msa1262130:CDS | 20.0% |
| !! | AAAACGTAGTAGAATAATTA+AGG | + | chr8_2:64740158-64740177 | Msa1262130:CDS | 20.0% |
| !! | AAATGTCTCTTCATATATAT+AGG | + | chr8_2:64740624-64740643 | Msa1262130:intron | 20.0% |
| !! | AATGTCTCTTCATATATATA+GGG | + | chr8_2:64740625-64740644 | Msa1262130:intron | 20.0% |
| ! | TGAGAAATGAGAAGATTAAT+TGG | - | chr8_2:64738479-64738498 | None:intergenic | 25.0% |
| ! | AATTGTGAAGAAGAAATGAA+GGG | - | chr8_2:64738532-64738551 | None:intergenic | 25.0% |
| ! | TTCACAATTCAATCACAAAA+TGG | + | chr8_2:64738543-64738562 | Msa1262130:CDS | 25.0% |
| !!! | AATGCATTTGTTTTCTTCTT+GGG | + | chr8_2:64738719-64738738 | Msa1262130:CDS | 25.0% |
| ! | ATAAAGTTGTCATCTTTGAA+TGG | + | chr8_2:64739082-64739101 | Msa1262130:CDS | 25.0% |
| !!! | TAAGGTTTTGATTGATAATG+AGG | + | chr8_2:64739117-64739136 | Msa1262130:CDS | 25.0% |
| ! | TAGTAAATTAAATGGGAAGT+TGG | + | chr8_2:64739372-64739391 | Msa1262130:CDS | 25.0% |
| !!! | AATTCTGAGAGAGAAAATTT+TGG | + | chr8_2:64739460-64739479 | Msa1262130:CDS | 25.0% |
| !! | AACTATACTCTTTTCTTTCA+GGG | - | chr8_2:64739519-64739538 | None:intergenic | 25.0% |
| !! | TAACTATACTCTTTTCTTTC+AGG | - | chr8_2:64739520-64739539 | None:intergenic | 25.0% |
| !! | AAAGAAAAGAGTATAGTTAC+CGG | + | chr8_2:64739521-64739540 | Msa1262130:CDS | 25.0% |
| ! | AATGACAAGATAATACATAC+CGG | - | chr8_2:64740381-64740400 | None:intergenic | 25.0% |
| !!! | CTTCTTCATTCAATTTGTTA+AGG | + | chr8_2:64740419-64740438 | Msa1262130:intron | 25.0% |
| ! | ATGTACAACAAAAATCATCA+TGG | - | chr8_2:64740589-64740608 | None:intergenic | 25.0% |
| ! | TGCAAATTATCCATGTTAAA+TGG | + | chr8_2:64740991-64741010 | Msa1262130:intron | 25.0% |
| ! | ATCTTTCACTTGTATGTTAT+TGG | - | chr8_2:64741218-64741237 | None:intergenic | 25.0% |
| ! | TATAGGAAAAAGATGAAACT+TGG | - | chr8_2:64741423-64741442 | None:intergenic | 25.0% |
| !! | ATCATGAATATTGGTTATGT+TGG | + | chr8_2:64741567-64741586 | Msa1262130:three_prime_UTR | 25.0% |
| ! | AGATTTCTTTGATACACATT+TGG | + | chr8_2:64741599-64741618 | Msa1262130:three_prime_UTR | 25.0% |
| ! | GATTTCTTTGATACACATTT+GGG | + | chr8_2:64741600-64741619 | Msa1262130:three_prime_UTR | 25.0% |
| ! | ACATTCTACAACTATTTGTA+AGG | + | chr8_2:64741809-64741828 | Msa1262130:three_prime_UTR | 25.0% |
| GAATTGTGAAGAAGAAATGA+AGG | - | chr8_2:64738533-64738552 | None:intergenic | 30.0% | |
| !! | CGAAATTTTCTTGTTTCAGT+TGG | + | chr8_2:64738680-64738699 | Msa1262130:CDS | 30.0% |
| !! | GAATGCATTTGTTTTCTTCT+TGG | + | chr8_2:64738718-64738737 | Msa1262130:CDS | 30.0% |
| !! | ATGCATTTGTTTTCTTCTTG+GGG | + | chr8_2:64738720-64738739 | Msa1262130:CDS | 30.0% |
| ! | TTTTGCGAAACGGTAATTTT+TGG | + | chr8_2:64738840-64738859 | Msa1262130:CDS | 30.0% |
| AGTGAGAAATTGAAGAGTTT+AGG | + | chr8_2:64738938-64738957 | Msa1262130:CDS | 30.0% | |
| GAATGGAAGGAATTATGTTA+AGG | + | chr8_2:64739099-64739118 | Msa1262130:CDS | 30.0% | |
| ! | GATAATGAGGAAAAGTGTAA+TGG | + | chr8_2:64739130-64739149 | Msa1262130:CDS | 30.0% |
| !!! | TGTTTTGGTTGAGAATCATA+AGG | + | chr8_2:64739153-64739172 | Msa1262130:CDS | 30.0% |
| !!! | GTTTTGGTTGAGAATCATAA+GGG | + | chr8_2:64739154-64739173 | Msa1262130:CDS | 30.0% |
| ! | ATCTATTGGTAATCTGTTTC+AGG | + | chr8_2:64739225-64739244 | Msa1262130:CDS | 30.0% |
| !! | TGAAGAGAAGCATTTGAATT+TGG | + | chr8_2:64739339-64739358 | Msa1262130:CDS | 30.0% |
| !! | GTTTTAGATATGGACAGAAA+TGG | + | chr8_2:64739424-64739443 | Msa1262130:CDS | 30.0% |
| !! | AGAGAGAAAATTTTGGTGTA+GGG | + | chr8_2:64739467-64739486 | Msa1262130:CDS | 30.0% |
| ! | ACTATACTCTTTTCTTTCAG+GGG | - | chr8_2:64739518-64739537 | None:intergenic | 30.0% |
| ACAAGCAAAAGAGTTTGTAA+AGG | + | chr8_2:64739936-64739955 | Msa1262130:CDS | 30.0% | |
| CAAGCAAAAGAGTTTGTAAA+GGG | + | chr8_2:64739937-64739956 | Msa1262130:CDS | 30.0% | |
| !! | TTTGTAAAGGGTACTTATGA+TGG | + | chr8_2:64739949-64739968 | Msa1262130:CDS | 30.0% |
| ATAACAGTATGTAATCTGCT+GGG | - | chr8_2:64740459-64740478 | None:intergenic | 30.0% | |
| TATAACAGTATGTAATCTGC+TGG | - | chr8_2:64740460-64740479 | None:intergenic | 30.0% | |
| CAAAAATCATCATGGTTAAC+TGG | - | chr8_2:64740581-64740600 | None:intergenic | 30.0% | |
| AGTTATGTGTTATGTGAACA+AGG | - | chr8_2:64740838-64740857 | None:intergenic | 30.0% | |
| TTGTTCACATAACACATAAC+TGG | + | chr8_2:64740837-64740856 | Msa1262130:intron | 30.0% | |
| TATTATCTCCTGTACTAACT+TGG | + | chr8_2:64741047-64741066 | Msa1262130:intron | 30.0% | |
| AGACAACTTTAGTCAATTCA+TGG | + | chr8_2:64741271-64741290 | Msa1262130:exon | 30.0% | |
| ACTTTAGTCAATTCATGGAA+AGG | + | chr8_2:64741276-64741295 | Msa1262130:exon | 30.0% | |
| CTTTAGTCAATTCATGGAAA+GGG | + | chr8_2:64741277-64741296 | Msa1262130:exon | 30.0% | |
| AGACTATTATATATCTGCCT+TGG | + | chr8_2:64741338-64741357 | Msa1262130:three_prime_UTR | 30.0% | |
| ATTTATGCAAATATACCTGC+TGG | - | chr8_2:64741373-64741392 | None:intergenic | 30.0% | |
| AGCAGGTATATTTGCATAAA+TGG | + | chr8_2:64741372-64741391 | Msa1262130:intron | 30.0% | |
| AATGCAGCTATCATGAATAT+TGG | + | chr8_2:64741558-64741577 | Msa1262130:intron | 30.0% | |
| ! | ATGAATATTGGTTATGTTGG+TGG | + | chr8_2:64741570-64741589 | Msa1262130:three_prime_UTR | 30.0% |
| !! | TTTCAATCTATCTCTAGGAT+GGG | + | chr8_2:64741655-64741674 | Msa1262130:three_prime_UTR | 30.0% |
| !! | ACTGATTTTGCATTTATGAG+AGG | + | chr8_2:64741745-64741764 | Msa1262130:three_prime_UTR | 30.0% |
| TTTCAAAGGACTACGAAATT+TGG | + | chr8_2:64741849-64741868 | Msa1262130:three_prime_UTR | 30.0% | |
| AAAGTGCAAATAAAAGGCTG+TGG | - | chr8_2:64738277-64738296 | None:intergenic | 35.0% | |
| GAAGAAGAAATGAAGGGTTA+CGG | - | chr8_2:64738526-64738545 | None:intergenic | 35.0% | |
| AGAAGTAGCTCGAAATGTTA+GGG | - | chr8_2:64738585-64738604 | None:intergenic | 35.0% | |
| ! | TCTGCTATGGTTTTTGCAAT+TGG | + | chr8_2:64738803-64738822 | Msa1262130:CDS | 35.0% |
| TTTGCAATTGGTTATAGCGT+AGG | + | chr8_2:64738815-64738834 | Msa1262130:CDS | 35.0% | |
| TTGCAATTGGTTATAGCGTA+GGG | + | chr8_2:64738816-64738835 | Msa1262130:CDS | 35.0% | |
| !!! | CGAAACGGTAATTTTTGGTT+CGG | + | chr8_2:64738845-64738864 | Msa1262130:CDS | 35.0% |
| !!! | TTTTTGGTTCGGCGAATTAA+AGG | + | chr8_2:64738856-64738875 | Msa1262130:CDS | 35.0% |
| CTTTGATGAGATTGATGTTG+TGG | + | chr8_2:64738967-64738986 | Msa1262130:CDS | 35.0% | |
| AGTTGTCATCTTTGAATGGA+AGG | + | chr8_2:64739086-64739105 | Msa1262130:CDS | 35.0% | |
| !! | GGAAAAGTGTAATGGTGTTT+TGG | + | chr8_2:64739138-64739157 | Msa1262130:CDS | 35.0% |
| GGTAGAAGAAAGAAACAAGT+TGG | + | chr8_2:64739178-64739197 | Msa1262130:CDS | 35.0% | |
| TATCAGATGCTGCAATCTAT+TGG | + | chr8_2:64739211-64739230 | Msa1262130:CDS | 35.0% | |
| ! | CTTCACATTTTCTCTGACTT+TGG | - | chr8_2:64739275-64739294 | None:intergenic | 35.0% |
| AAGTCAGAGAAAATGTGAAG+AGG | + | chr8_2:64739275-64739294 | Msa1262130:CDS | 35.0% | |
| AGAAAATGTGAAGAGGCAAT+TGG | + | chr8_2:64739282-64739301 | Msa1262130:CDS | 35.0% | |
| TTCAAATGCTTCTCTTCAAC+CGG | - | chr8_2:64739337-64739356 | None:intergenic | 35.0% | |
| ATGGACAGAAATGGAAGAAT+AGG | + | chr8_2:64739433-64739452 | Msa1262130:CDS | 35.0% | |
| !! | GAGAGAGAAAATTTTGGTGT+AGG | + | chr8_2:64739466-64739485 | Msa1262130:CDS | 35.0% |
| !! | GAGAGAAAATTTTGGTGTAG+GGG | + | chr8_2:64739468-64739487 | Msa1262130:CDS | 35.0% |
| TAATGCTTTCAGAATCAAGC+CGG | - | chr8_2:64739636-64739655 | None:intergenic | 35.0% | |
| GGTATGAAGAAGATAGAGAT+AGG | + | chr8_2:64739776-64739795 | Msa1262130:CDS | 35.0% | |
| GTCATCAGCAAGTAATTGAT+CGG | - | chr8_2:64739815-64739834 | None:intergenic | 35.0% | |
| ! | TGAAACTTTTGTAGACGAAG+GGG | - | chr8_2:64739866-64739885 | None:intergenic | 35.0% |
| ! | CTGAAACTTTTGTAGACGAA+GGG | - | chr8_2:64739867-64739886 | None:intergenic | 35.0% |
| !! | TCTGAAACTTTTGTAGACGA+AGG | - | chr8_2:64739868-64739887 | None:intergenic | 35.0% |
| CTTAAAGCCTATGAGTTTGT+TGG | + | chr8_2:64740029-64740048 | Msa1262130:CDS | 35.0% | |
| GGAAACACTTATCTTCTTCA+TGG | + | chr8_2:64740066-64740085 | Msa1262130:CDS | 35.0% | |
| TGAACTGAGAAATCTTCTCT+CGG | + | chr8_2:64740113-64740132 | Msa1262130:CDS | 35.0% | |
| TTGCATAGCTTCTTCTTTAC+TGG | - | chr8_2:64740202-64740221 | None:intergenic | 35.0% | |
| ! | GGTCAATTGATAGCAGATAT+TGG | + | chr8_2:64740354-64740373 | Msa1262130:CDS | 35.0% |
| ! | ATTGATAGCAGATATTGGTC+CGG | + | chr8_2:64740359-64740378 | Msa1262130:CDS | 35.0% |
| TAACAGTATGTAATCTGCTG+GGG | - | chr8_2:64740458-64740477 | None:intergenic | 35.0% | |
| TTTGATGCTATGCTGTTGAA+AGG | + | chr8_2:64740694-64740713 | Msa1262130:CDS | 35.0% | |
| ATGTTATGCTGACCATTTCT+CGG | + | chr8_2:64740805-64740824 | Msa1262130:intron | 35.0% | |
| TGAAAAACTGCACTGAGAAT+AGG | + | chr8_2:64740892-64740911 | Msa1262130:intron | 35.0% | |
| TGCACTGAGAATAGGAATTT+AGG | + | chr8_2:64740900-64740919 | Msa1262130:intron | 35.0% | |
| GTGAAAATCCAAGTTAGTAC+AGG | - | chr8_2:64741058-64741077 | None:intergenic | 35.0% | |
| !! | AAATTGCAGCTTTGTTCAGA+TGG | + | chr8_2:64741083-64741102 | Msa1262130:intron | 35.0% |
| !! | AATTGCAGCTTTGTTCAGAT+GGG | + | chr8_2:64741084-64741103 | Msa1262130:intron | 35.0% |
| GTTATCCAGAAGAATCAGTT+TGG | + | chr8_2:64741299-64741318 | Msa1262130:three_prime_UTR | 35.0% | |
| ! | TGTAACCAAACTGATTCTTC+TGG | - | chr8_2:64741307-64741326 | None:intergenic | 35.0% |
| ATCAGTTTGGTTACAATTGC+TGG | + | chr8_2:64741312-64741331 | Msa1262130:three_prime_UTR | 35.0% | |
| ! | CTTTCAATCTATCTCTAGGA+TGG | + | chr8_2:64741654-64741673 | Msa1262130:three_prime_UTR | 35.0% |
| ! | CGTAGTCCTTTGAAAAGTTT+GGG | - | chr8_2:64741844-64741863 | None:intergenic | 35.0% |
| ! | TCGTAGTCCTTTGAAAAGTT+TGG | - | chr8_2:64741845-64741864 | None:intergenic | 35.0% |
| !!! | TGTACGACATGTCGTTTTGT+TGG | + | chr8_2:64738370-64738389 | Msa1262130:five_prime_UTR | 40.0% |
| !!! | GACATGTCGTTTTGTTGGTT+TGG | + | chr8_2:64738375-64738394 | Msa1262130:five_prime_UTR | 40.0% |
| AACGTAACGATTCAGAACGA+AGG | - | chr8_2:64738411-64738430 | None:intergenic | 40.0% | |
| CGGAAACGATCGTGAAAATA+AGG | - | chr8_2:64738506-64738525 | None:intergenic | 40.0% | |
| TCAATCACAAAATGGACACG+TGG | + | chr8_2:64738551-64738570 | Msa1262130:CDS | 40.0% | |
| CAGAAGTAGCTCGAAATGTT+AGG | - | chr8_2:64738586-64738605 | None:intergenic | 40.0% | |
| GCATCTACATCAACTGTCTA+TGG | + | chr8_2:64738605-64738624 | Msa1262130:CDS | 40.0% | |
| TCTACATCAACTGTCTATGG+TGG | + | chr8_2:64738608-64738627 | Msa1262130:CDS | 40.0% | |
| ATCAACTGTCTATGGTGGTT+GGG | + | chr8_2:64738613-64738632 | Msa1262130:CDS | 40.0% | |
| TTTGTGCAATGGCGATTTCT+AGG | + | chr8_2:64738747-64738766 | Msa1262130:CDS | 40.0% | |
| TTGTGCAATGGCGATTTCTA+GGG | + | chr8_2:64738748-64738767 | Msa1262130:CDS | 40.0% | |
| !! | AATGGCGATTTCTAGGGTTA+GGG | + | chr8_2:64738754-64738773 | Msa1262130:CDS | 40.0% |
| TATTCTTCCAGCTTCTGCTA+TGG | + | chr8_2:64738790-64738809 | Msa1262130:CDS | 40.0% | |
| GAATTAAAGGTGAGTGGAAG+TGG | + | chr8_2:64738869-64738888 | Msa1262130:CDS | 40.0% | |
| AAGTGGAAGTAGTTTGAGGA+AGG | + | chr8_2:64738892-64738911 | Msa1262130:CDS | 40.0% | |
| TTGGTTGAGAATCATAAGGG+TGG | + | chr8_2:64739157-64739176 | Msa1262130:CDS | 40.0% | |
| ! | AAGAAACAAGTTGGAGAAGC+TGG | + | chr8_2:64739187-64739206 | Msa1262130:CDS | 40.0% |
| ! | CACATTTTCTCTGACTTTGG+TGG | - | chr8_2:64739272-64739291 | None:intergenic | 40.0% |
| TTGGATCAAACTCGAGGAAA+CGG | + | chr8_2:64739301-64739320 | Msa1262130:CDS | 40.0% | |
| ATTCTTCTCAAGACTCGTTC+AGG | + | chr8_2:64739395-64739414 | Msa1262130:CDS | 40.0% | |
| TTCTTCTCAAGACTCGTTCA+GGG | + | chr8_2:64739396-64739415 | Msa1262130:CDS | 40.0% | |
| !! | CAGGGACTCTGTTTTAGATA+TGG | + | chr8_2:64739414-64739433 | Msa1262130:CDS | 40.0% |
| GAGTATAGTTACCGGAACAA+AGG | + | chr8_2:64739529-64739548 | Msa1262130:CDS | 40.0% | |
| TGAACCTCAATCCTTTGTTC+CGG | - | chr8_2:64739543-64739562 | None:intergenic | 40.0% | |
| CCATCTTCAAAGAGATGCTA+TGG | - | chr8_2:64739573-64739592 | None:intergenic | 40.0% | |
| ! | CCATAGCATCTCTTTGAAGA+TGG | + | chr8_2:64739570-64739589 | Msa1262130:CDS | 40.0% |
| TAAAGTCAGAATGAAACGCG+TGG | + | chr8_2:64739654-64739673 | Msa1262130:CDS | 40.0% | |
| TAGAAGACCTGAAAGTTTCC+TGG | - | chr8_2:64739723-64739742 | None:intergenic | 40.0% | |
| TCAGGTCTTCTATCGACAAA+AGG | + | chr8_2:64739731-64739750 | Msa1262130:CDS | 40.0% | |
| TCTATCGACAAAAGGAACAG+TGG | + | chr8_2:64739739-64739758 | Msa1262130:CDS | 40.0% | |
| CTATCGACAAAAGGAACAGT+GGG | + | chr8_2:64739740-64739759 | Msa1262130:CDS | 40.0% | |
| TAGATATCTCGCTGAAGCAA+CGG | + | chr8_2:64739903-64739922 | Msa1262130:CDS | 40.0% | |
| AAGTTTACTCTCCAAAGCTG+TGG | + | chr8_2:64740005-64740024 | Msa1262130:CDS | 40.0% | |
| GAACTGAGAAATCTTCTCTC+GGG | + | chr8_2:64740114-64740133 | Msa1262130:CDS | 40.0% | |
| ! | TGCAGGAAGAAAGTATAGAC+TGG | + | chr8_2:64740266-64740285 | Msa1262130:CDS | 40.0% |
| ATGTCAGAGCCCTGTATAAT+TGG | + | chr8_2:64740310-64740329 | Msa1262130:CDS | 40.0% | |
| TGTCAGAGCCCTGTATAATT+GGG | + | chr8_2:64740311-64740330 | Msa1262130:CDS | 40.0% | |
| TATCTGCTATCAATTGACCG+CGG | - | chr8_2:64740353-64740372 | None:intergenic | 40.0% | |
| !!! | TATATAGGGTGCTGCTTTTG+AGG | + | chr8_2:64740639-64740658 | Msa1262130:intron | 40.0% |
| !! | TGAGGCTGAAAGAGTATTCT+TGG | + | chr8_2:64740657-64740676 | Msa1262130:CDS | 40.0% |
| GGAAATGTTTATGCACCAGA+TGG | + | chr8_2:64740715-64740734 | Msa1262130:CDS | 40.0% | |
| TCACATACAAGCACAACTAG+AGG | + | chr8_2:64740782-64740801 | Msa1262130:intron | 40.0% | |
| ! | CAGCATGATGCCATTTAACA+TGG | - | chr8_2:64741004-64741023 | None:intergenic | 40.0% |
| GCTGTTGCAGAATTTCTTCA+TGG | + | chr8_2:64741020-64741039 | Msa1262130:intron | 40.0% | |
| !! | ATTGCAGCTTTGTTCAGATG+GGG | + | chr8_2:64741085-64741104 | Msa1262130:intron | 40.0% |
| AACTTCTCCTTACTACTTCC+TGG | - | chr8_2:64741142-64741161 | None:intergenic | 40.0% | |
| GAAGTTGAAGTTACTTCAGC+AGG | + | chr8_2:64741156-64741175 | Msa1262130:CDS | 40.0% | |
| AGTTACTTCAGCAGGCTAAA+CGG | + | chr8_2:64741164-64741183 | Msa1262130:CDS | 40.0% | |
| ATACGAAGACGCTCTTGATA+TGG | + | chr8_2:64741189-64741208 | Msa1262130:CDS | 40.0% | |
| ACAAACCGCAATAAGATCTC+AGG | + | chr8_2:64741626-64741645 | Msa1262130:three_prime_UTR | 40.0% | |
| GGTGCTTTCAATCTATCTCT+AGG | + | chr8_2:64741650-64741669 | Msa1262130:three_prime_UTR | 40.0% | |
| ! | AGTCAGCCCAAACTTTTCAA+AGG | + | chr8_2:64741835-64741854 | Msa1262130:three_prime_UTR | 40.0% |
| ACGACACGTGTTTAACTGTG+CGG | + | chr8_2:64738326-64738345 | Msa1262130:five_prime_UTR | 45.0% | |
| CATCAACTGTCTATGGTGGT+TGG | + | chr8_2:64738612-64738631 | Msa1262130:CDS | 45.0% | |
| TCGCAACGAATCAAACTCAC+CGG | - | chr8_2:64738663-64738682 | None:intergenic | 45.0% | |
| CTTGGGGATTGTTTGTGCAA+TGG | + | chr8_2:64738736-64738755 | Msa1262130:CDS | 45.0% | |
| !! | CAATGGCGATTTCTAGGGTT+AGG | + | chr8_2:64738753-64738772 | Msa1262130:CDS | 45.0% |
| GCAAAAACCATAGCAGAAGC+TGG | - | chr8_2:64738800-64738819 | None:intergenic | 45.0% | |
| ! | AGCGTAGGGTTTTTGCGAAA+CGG | + | chr8_2:64738830-64738849 | Msa1262130:CDS | 45.0% |
| TTCGGCGAATTAAAGGTGAG+TGG | + | chr8_2:64738863-64738882 | Msa1262130:CDS | 45.0% | |
| GTGGAAGTGGAAGTAGTTTG+AGG | + | chr8_2:64738888-64738907 | Msa1262130:CDS | 45.0% | |
| AGGCAATTGGATCAAACTCG+AGG | + | chr8_2:64739295-64739314 | Msa1262130:CDS | 45.0% | |
| AAATGCTTCTCTTCAACCGG+AGG | - | chr8_2:64739334-64739353 | None:intergenic | 45.0% | |
| GTTACCGGAACAAAGGATTG+AGG | + | chr8_2:64739536-64739555 | Msa1262130:CDS | 45.0% | |
| ! | AGAATCAAGCCGGCTTTCAT+GGG | - | chr8_2:64739626-64739645 | None:intergenic | 45.0% |
| AAGCAACTGCTCACGCAAAA+AGG | - | chr8_2:64739692-64739711 | None:intergenic | 45.0% | |
| CGTGAGCAGTTGCTTAATCA+AGG | + | chr8_2:64739697-64739716 | Msa1262130:CDS | 45.0% | |
| ATCAAGGCCAGGAAACTTTC+AGG | + | chr8_2:64739713-64739732 | Msa1262130:CDS | 45.0% | |
| TCTTCATACCGAGACCTATC+AGG | - | chr8_2:64739766-64739785 | None:intergenic | 45.0% | |
| !! | AGGCTTTAAGTCCACAGCTT+TGG | - | chr8_2:64740019-64740038 | None:intergenic | 45.0% |
| CCTACAGCCAACAAACTCAT+AGG | - | chr8_2:64740039-64740058 | None:intergenic | 45.0% | |
| !! | CCTATGAGTTTGTTGGCTGT+AGG | + | chr8_2:64740036-64740055 | Msa1262130:CDS | 45.0% |
| GAAGAGCTACTGGTAAATGC+AGG | + | chr8_2:64740249-64740268 | Msa1262130:CDS | 45.0% | |
| GTCAGAGCCCTGTATAATTG+GGG | + | chr8_2:64740312-64740331 | Msa1262130:CDS | 45.0% | |
| TGCAAGGCCCCAATTATACA+GGG | - | chr8_2:64740322-64740341 | None:intergenic | 45.0% | |
| ACAGCGCATGTAATACCATC+TGG | - | chr8_2:64740733-64740752 | None:intergenic | 45.0% | |
| CAAGGTATGTCACCGAGAAA+TGG | - | chr8_2:64740820-64740839 | None:intergenic | 45.0% | |
| TAGTGCAGAGATTGTGTGTG+CGG | - | chr8_2:64740958-64740977 | None:intergenic | 45.0% | |
| !! | AGCTTTGTTCAGATGGGGTA+TGG | + | chr8_2:64741090-64741109 | Msa1262130:intron | 45.0% |
| TACAGCAGAGATCTCGCTTA+AGG | + | chr8_2:64741116-64741135 | Msa1262130:CDS | 45.0% | |
| CTTAAGGCCAGGAAGTAGTA+AGG | + | chr8_2:64741132-64741151 | Msa1262130:CDS | 45.0% | |
| CTCAGAGACACACAAGGATA+AGG | - | chr8_2:64741242-64741261 | None:intergenic | 45.0% | |
| GTTAAGCTCAGAGACACACA+AGG | - | chr8_2:64741248-64741267 | None:intergenic | 45.0% | |
| ! | CAAATATACCTGCTGGTTGC+TGG | - | chr8_2:64741366-64741385 | None:intergenic | 45.0% |
| CCTTCAGCGTAAATGAGCTA+CGG | + | chr8_2:64741395-64741414 | Msa1262130:intron | 45.0% | |
| AACCGCAATAAGATCTCAGG+AGG | + | chr8_2:64741629-64741648 | Msa1262130:three_prime_UTR | 45.0% | |
| CACCTCCTGAGATCTTATTG+CGG | - | chr8_2:64741634-64741653 | None:intergenic | 45.0% | |
| AAGGTGAGTGGAAGTGGAAG+TGG | + | chr8_2:64738875-64738894 | Msa1262130:CDS | 50.0% | |
| ! | GGGGATAATCACAGAAGTGC+TGG | + | chr8_2:64739487-64739506 | Msa1262130:CDS | 50.0% |
| CAGCAGTGTGACAGACATGT+GGG | + | chr8_2:64739597-64739616 | Msa1262130:CDS | 50.0% | |
| TGTGGGAATCCCATGAAAGC+CGG | + | chr8_2:64739614-64739633 | Msa1262130:CDS | 50.0% | |
| ! | CAGAATCAAGCCGGCTTTCA+TGG | - | chr8_2:64739627-64739646 | None:intergenic | 50.0% |
| GCAGTTGCTTAATCAAGGCC+AGG | + | chr8_2:64739702-64739721 | Msa1262130:CDS | 50.0% | |
| AAAGGAACAGTGGGCCTGAT+AGG | + | chr8_2:64739749-64739768 | Msa1262130:CDS | 50.0% | |
| ! | TTGTTGGCTGTAGGACAGCT+AGG | + | chr8_2:64740045-64740064 | Msa1262130:CDS | 50.0% |
| ! | TGAAGAGTGCGAAGAGCTAC+TGG | + | chr8_2:64740239-64740258 | Msa1262130:CDS | 50.0% |
| GTGCAAGGCCCCAATTATAC+AGG | - | chr8_2:64740323-64740342 | None:intergenic | 50.0% | |
| AGTATGTAATCTGCTGGGGC+GGG | - | chr8_2:64740454-64740473 | None:intergenic | 50.0% | |
| CAGTATGTAATCTGCTGGGG+CGG | - | chr8_2:64740455-64740474 | None:intergenic | 50.0% | |
| CCGTAGCTCATTTACGCTGA+AGG | - | chr8_2:64741398-64741417 | None:intergenic | 50.0% | |
| AGGAAACGGTGCTTTGCCTC+CGG | + | chr8_2:64739315-64739334 | Msa1262130:CDS | 55.0% | |
| CCACATGTCTGTCACACTGC+TGG | - | chr8_2:64739599-64739618 | None:intergenic | 55.0% | |
| CCAGCAGTGTGACAGACATG+TGG | + | chr8_2:64739596-64739615 | Msa1262130:CDS | 55.0% | |
| ACAGTGGGCCTGATAGGTCT+CGG | + | chr8_2:64739755-64739774 | Msa1262130:CDS | 55.0% | |
| GGCCTTGCACTTTCTTTCCG+CGG | + | chr8_2:64740333-64740352 | Msa1262130:CDS | 55.0% | |
| ! | GACCGCGGAAAGAAAGTGCA+AGG | - | chr8_2:64740338-64740357 | None:intergenic | 55.0% |
| CAGAGATCTCGCTTAAGGCC+AGG | + | chr8_2:64741121-64741140 | Msa1262130:CDS | 55.0% | |
| CTCGCCAGCTCAGAAGCTTC+CGG | + | chr8_2:64738641-64738660 | Msa1262130:CDS | 60.0% | |
| CTCACCGGAAGCTTCTGAGC+TGG | - | chr8_2:64738648-64738667 | None:intergenic | 60.0% | |
| ATGTAATCTGCTGGGGCGGG+AGG | - | chr8_2:64740451-64740470 | None:intergenic | 60.0% | |
| ! | CCTGCTGGTTGCTGGATCCA+AGG | - | chr8_2:64741358-64741377 | None:intergenic | 60.0% |
| CCTTGGATCCAGCAACCAGC+AGG | + | chr8_2:64741355-64741374 | Msa1262130:three_prime_UTR | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_2 | gene | 64738266 | 64741874 | 64738266 | ID=Msa1262130;Name=Msa1262130 |
| chr8_2 | mRNA | 64738266 | 64741874 | 64738266 | ID=Msa1262130-mRNA-1;Parent=Msa1262130;Name=Msa1262130-mRNA-1;_AED=0.03;_eAED=0.03;_QI=186|1|1|1|0.66|0.5|4|404|736 |
| chr8_2 | exon | 64738266 | 64740380 | 64738266 | ID=Msa1262130-mRNA-1:exon:20917;Parent=Msa1262130-mRNA-1 |
| chr8_2 | exon | 64740646 | 64740736 | 64740646 | ID=Msa1262130-mRNA-1:exon:20918;Parent=Msa1262130-mRNA-1 |
| chr8_2 | exon | 64741092 | 64741376 | 64741092 | ID=Msa1262130-mRNA-1:exon:20919;Parent=Msa1262130-mRNA-1 |
| chr8_2 | exon | 64741565 | 64741874 | 64741565 | ID=Msa1262130-mRNA-1:exon:20920;Parent=Msa1262130-mRNA-1 |
| chr8_2 | five_prime_UTR | 64738266 | 64738451 | 64738266 | ID=Msa1262130-mRNA-1:five_prime_utr;Parent=Msa1262130-mRNA-1 |
| chr8_2 | CDS | 64738452 | 64740380 | 64738452 | ID=Msa1262130-mRNA-1:cds;Parent=Msa1262130-mRNA-1 |
| chr8_2 | CDS | 64740646 | 64740736 | 64740646 | ID=Msa1262130-mRNA-1:cds;Parent=Msa1262130-mRNA-1 |
| chr8_2 | CDS | 64741092 | 64741282 | 64741092 | ID=Msa1262130-mRNA-1:cds;Parent=Msa1262130-mRNA-1 |
| chr8_2 | three_prime_UTR | 64741283 | 64741376 | 64741283 | ID=Msa1262130-mRNA-1:three_prime_utr;Parent=Msa1262130-mRNA-1 |
| chr8_2 | three_prime_UTR | 64741565 | 64741874 | 64741565 | ID=Msa1262130-mRNA-1:three_prime_utr;Parent=Msa1262130-mRNA-1 |
| Gene Sequence |
| Protein sequence |
