Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0576400 | XP_003630818.1 | 98.496 | 266 | 4 | 0 | 1 | 266 | 423 | 688 | 0.0 | 527 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0576400 | G7L8Z4 | 98.496 | 266 | 4 | 0 | 1 | 266 | 423 | 688 | 0.0 | 527 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0007230 | Msa0576400 | -0.826831 | 2.186032e-54 | -8.615850e-47 |
| Msa0015370 | Msa0576400 | -0.814473 | 1.513523e-51 | -8.615850e-47 |
| Msa0029020 | Msa0576400 | 0.801802 | 7.583629e-49 | -8.615850e-47 |
| Msa0030030 | Msa0576400 | -0.801525 | 8.642108e-49 | -8.615850e-47 |
| Msa0038350 | Msa0576400 | 0.855399 | 6.474922e-62 | -8.615850e-47 |
| Msa0040190 | Msa0576400 | -0.804878 | 1.748835e-49 | -8.615850e-47 |
| Msa0046310 | Msa0576400 | -0.811882 | 5.605726e-51 | -8.615850e-47 |
| Msa0053480 | Msa0576400 | -0.803663 | 3.130492e-49 | -8.615850e-47 |
| Msa0055590 | Msa0576400 | -0.829941 | 3.884236e-55 | -8.615850e-47 |
| Msa0060350 | Msa0576400 | -0.840657 | 7.618836e-58 | -8.615850e-47 |
| Msa0060600 | Msa0576400 | -0.813574 | 2.389452e-51 | -8.615850e-47 |
| Msa0083160 | Msa0576400 | -0.804600 | 1.998216e-49 | -8.615850e-47 |
| Msa0085240 | Msa0576400 | -0.802320 | 5.934415e-49 | -8.615850e-47 |
| Msa0094100 | Msa0576400 | -0.811041 | 8.538166e-51 | -8.615850e-47 |
| Msa0105340 | Msa0576400 | -0.826946 | 2.051707e-54 | -8.615850e-47 |
| Msa0105420 | Msa0576400 | -0.816498 | 5.360216e-52 | -8.615850e-47 |
| Msa0106120 | Msa0576400 | 0.802155 | 6.414631e-49 | -8.615850e-47 |
| Msa0133880 | Msa0576400 | -0.803872 | 2.833336e-49 | -8.615850e-47 |
| Msa0134550 | Msa0576400 | -0.806374 | 8.485439e-50 | -8.615850e-47 |
| Msa0140910 | Msa0576400 | -0.811016 | 8.645336e-51 | -8.615850e-47 |
| Msa0143970 | Msa0576400 | -0.837786 | 4.232813e-57 | -8.615850e-47 |
| Msa0143980 | Msa0576400 | -0.817687 | 2.897374e-52 | -8.615850e-47 |
| Msa0151690 | Msa0576400 | -0.805047 | 1.611986e-49 | -8.615850e-47 |
| Msa0162030 | Msa0576400 | -0.810013 | 1.423351e-50 | -8.615850e-47 |
| Msa0162050 | Msa0576400 | -0.831874 | 1.302971e-55 | -8.615850e-47 |
| Msa0162070 | Msa0576400 | -0.828243 | 1.001883e-54 | -8.615850e-47 |
| Msa0169960 | Msa0576400 | -0.805921 | 1.057148e-49 | -8.615850e-47 |
| Msa0172370 | Msa0576400 | -0.820716 | 5.920473e-53 | -8.615850e-47 |
| Msa0175530 | Msa0576400 | -0.803908 | 2.785321e-49 | -8.615850e-47 |
| Msa0181290 | Msa0576400 | -0.819995 | 8.665675e-53 | -8.615850e-47 |
| Msa0196130 | Msa0576400 | 0.803565 | 3.280892e-49 | -8.615850e-47 |
| Msa0200950 | Msa0576400 | 0.808812 | 2.576818e-50 | -8.615850e-47 |
| Msa0203640 | Msa0576400 | -0.801126 | 1.042868e-48 | -8.615850e-47 |
| Msa0208630 | Msa0576400 | -0.808422 | 3.121402e-50 | -8.615850e-47 |
| Msa0211010 | Msa0576400 | -0.806197 | 9.244965e-50 | -8.615850e-47 |
| Msa0221800 | Msa0576400 | -0.809969 | 1.454856e-50 | -8.615850e-47 |
| Msa0227500 | Msa0576400 | -0.802264 | 6.092416e-49 | -8.615850e-47 |
| Msa0371420 | Msa0576400 | 0.817427 | 3.317134e-52 | -8.615850e-47 |
| Msa0371610 | Msa0576400 | -0.819535 | 1.103530e-52 | -8.615850e-47 |
| Msa0411000 | Msa0576400 | -0.815302 | 9.912032e-52 | -8.615850e-47 |
| Msa0413740 | Msa0576400 | -0.817375 | 3.407640e-52 | -8.615850e-47 |
| Msa0414070 | Msa0576400 | -0.824146 | 9.451527e-54 | -8.615850e-47 |
| Msa0418000 | Msa0576400 | -0.855590 | 5.695341e-62 | -8.615850e-47 |
| Msa0423360 | Msa0576400 | 0.808828 | 2.556127e-50 | -8.615850e-47 |
| Msa0423600 | Msa0576400 | -0.812990 | 3.209433e-51 | -8.615850e-47 |
| Msa0436900 | Msa0576400 | -0.819971 | 8.776958e-53 | -8.615850e-47 |
| Msa0437710 | Msa0576400 | -0.801545 | 8.562500e-49 | -8.615850e-47 |
| Msa0440110 | Msa0576400 | -0.828038 | 1.122744e-54 | -8.615850e-47 |
| Msa0455230 | Msa0576400 | -0.810857 | 9.357395e-51 | -8.615850e-47 |
| Msa0457370 | Msa0576400 | -0.819173 | 1.334941e-52 | -8.615850e-47 |
| Msa0459120 | Msa0576400 | -0.821530 | 3.845183e-53 | -8.615850e-47 |
| Msa0465680 | Msa0576400 | 0.813328 | 2.705614e-51 | -8.615850e-47 |
| Msa0469270 | Msa0576400 | -0.804628 | 1.971792e-49 | -8.615850e-47 |
| Msa0473450 | Msa0576400 | -0.800935 | 1.140991e-48 | -8.615850e-47 |
| Msa0253370 | Msa0576400 | -0.814732 | 1.326153e-51 | -8.615850e-47 |
| Msa0258670 | Msa0576400 | 0.827495 | 1.516211e-54 | -8.615850e-47 |
| Msa0265820 | Msa0576400 | -0.818261 | 2.149570e-52 | -8.615850e-47 |
| Msa0266000 | Msa0576400 | 0.824459 | 7.978459e-54 | -8.615850e-47 |
| Msa0269360 | Msa0576400 | -0.825512 | 4.502228e-54 | -8.615850e-47 |
| Msa0270440 | Msa0576400 | 0.804788 | 1.825865e-49 | -8.615850e-47 |
| Msa0272420 | Msa0576400 | -0.809974 | 1.451173e-50 | -8.615850e-47 |
| Msa0296610 | Msa0576400 | -0.806903 | 6.559903e-50 | -8.615850e-47 |
| Msa0299010 | Msa0576400 | 0.800517 | 1.388516e-48 | -8.615850e-47 |
| Msa0304740 | Msa0576400 | -0.801276 | 9.716544e-49 | -8.615850e-47 |
| Msa0306130 | Msa0576400 | -0.825352 | 4.912298e-54 | -8.615850e-47 |
| Msa0313990 | Msa0576400 | -0.820713 | 5.930889e-53 | -8.615850e-47 |
| Msa0325470 | Msa0576400 | -0.807701 | 4.445255e-50 | -8.615850e-47 |
| Msa0331590 | Msa0576400 | -0.803742 | 3.014692e-49 | -8.615850e-47 |
| Msa0336270 | Msa0576400 | -0.814419 | 1.555581e-51 | -8.615850e-47 |
| Msa0342200 | Msa0576400 | -0.815574 | 8.622409e-52 | -8.615850e-47 |
| Msa0342340 | Msa0576400 | 0.808102 | 3.653076e-50 | -8.615850e-47 |
| Msa0350020 | Msa0576400 | -0.805303 | 1.424628e-49 | -8.615850e-47 |
| Msa0363460 | Msa0576400 | -0.811893 | 5.573377e-51 | -8.615850e-47 |
| Msa0498830 | Msa0576400 | -0.814118 | 1.813358e-51 | -8.615850e-47 |
| Msa0505390 | Msa0576400 | -0.820114 | 8.136771e-53 | -8.615850e-47 |
| Msa0505660 | Msa0576400 | -0.817290 | 3.560695e-52 | -8.615850e-47 |
| Msa0507190 | Msa0576400 | -0.807155 | 5.802700e-50 | -8.615850e-47 |
| Msa0509970 | Msa0576400 | -0.802368 | 5.798473e-49 | -8.615850e-47 |
| Msa0511890 | Msa0576400 | -0.817971 | 2.499797e-52 | -8.615850e-47 |
| Msa0524050 | Msa0576400 | -0.808477 | 3.038436e-50 | -8.615850e-47 |
| Msa0524890 | Msa0576400 | 0.805654 | 1.202355e-49 | -8.615850e-47 |
| Msa0526640 | Msa0576400 | 0.832768 | 7.828869e-56 | -8.615850e-47 |
| Msa0542040 | Msa0576400 | -0.811649 | 6.297909e-51 | -8.615850e-47 |
| Msa0546380 | Msa0576400 | -0.819757 | 9.823947e-53 | -8.615850e-47 |
| Msa0563140 | Msa0576400 | -0.814117 | 1.813792e-51 | -8.615850e-47 |
| Msa0574170 | Msa0576400 | -0.804662 | 1.939565e-49 | -8.615850e-47 |
| Msa0576400 | Msa0576990 | 0.833214 | 6.064920e-56 | -8.615850e-47 |
| Msa0576400 | Msa0583930 | -0.820604 | 6.282162e-53 | -8.615850e-47 |
| Msa0576400 | Msa0583940 | -0.812051 | 5.148327e-51 | -8.615850e-47 |
| Msa0576400 | Msa0591780 | -0.801382 | 9.243288e-49 | -8.615850e-47 |
| Msa0576400 | Msa0619330 | -0.805091 | 1.578327e-49 | -8.615850e-47 |
| Msa0576400 | Msa0621890 | -0.837797 | 4.205805e-57 | -8.615850e-47 |
| Msa0576400 | Msa0626890 | -0.821218 | 4.539127e-53 | -8.615850e-47 |
| Msa0576400 | Msa0635470 | -0.820888 | 5.407160e-53 | -8.615850e-47 |
| Msa0576400 | Msa0647000 | -0.810540 | 1.095906e-50 | -8.615850e-47 |
| Msa0576400 | Msa0654060 | -0.801930 | 7.136394e-49 | -8.615850e-47 |
| Msa0576400 | Msa0660880 | 0.824326 | 8.576671e-54 | -8.615850e-47 |
| Msa0576400 | Msa0694690 | 0.820820 | 5.605486e-53 | -8.615850e-47 |
| Msa0576400 | Msa0697140 | -0.811613 | 6.413062e-51 | -8.615850e-47 |
| Msa0576400 | Msa0701840 | 0.807872 | 4.087296e-50 | -8.615850e-47 |
| Msa0576400 | Msa0707780 | -0.809815 | 1.570060e-50 | -8.615850e-47 |
| Msa0576400 | Msa0716740 | 0.821739 | 3.440057e-53 | -8.615850e-47 |
| Msa0576400 | Msa0719490 | 0.800397 | 1.468854e-48 | -8.615850e-47 |
| Msa0576400 | Msa0722930 | -0.811429 | 7.032258e-51 | -8.615850e-47 |
| Msa0576400 | Msa0725480 | 0.804289 | 2.319997e-49 | -8.615850e-47 |
| Msa0576400 | Msa0726610 | -0.817482 | 3.223539e-52 | -8.615850e-47 |
| Msa0576400 | Msa0730180 | -0.822843 | 1.906839e-53 | -8.615850e-47 |
| Msa0576400 | Msa0739570 | -0.808564 | 2.911273e-50 | -8.615850e-47 |
| Msa0576400 | Msa0756480 | -0.836571 | 8.655718e-57 | -8.615850e-47 |
| Msa0576400 | Msa0766100 | 0.802787 | 4.753931e-49 | -8.615850e-47 |
| Msa0576400 | Msa0770430 | -0.810458 | 1.141214e-50 | -8.615850e-47 |
| Msa0576400 | Msa0782330 | -0.818980 | 1.476936e-52 | -8.615850e-47 |
| Msa0576400 | Msa0792170 | -0.808016 | 3.810402e-50 | -8.615850e-47 |
| Msa0576400 | Msa0792510 | -0.805910 | 1.062451e-49 | -8.615850e-47 |
| Msa0576400 | Msa0797220 | -0.801297 | 9.624160e-49 | -8.615850e-47 |
| Msa0576400 | Msa0799290 | 0.821016 | 5.051278e-53 | -8.615850e-47 |
| Msa0576400 | Msa0808420 | -0.816657 | 4.939840e-52 | -8.615850e-47 |
| Msa0576400 | Msa0835510 | -0.836495 | 9.050842e-57 | -8.615850e-47 |
| Msa0576400 | Msa0837510 | 0.819774 | 9.732784e-53 | -8.615850e-47 |
| Msa0576400 | Msa0837990 | -0.807494 | 4.919362e-50 | -8.615850e-47 |
| Msa0576400 | Msa0860270 | -0.832602 | 8.607549e-56 | -8.615850e-47 |
| Msa0576400 | Msa0887000 | -0.813488 | 2.495163e-51 | -8.615850e-47 |
| Msa0576400 | Msa0890250 | -0.819052 | 1.421815e-52 | -8.615850e-47 |
| Msa0576400 | Msa0896210 | -0.829759 | 4.300167e-55 | -8.615850e-47 |
| Msa0576400 | Msa0896220 | -0.800621 | 1.322808e-48 | -8.615850e-47 |
| Msa0576400 | Msa0900200 | -0.816263 | 6.051941e-52 | -8.615850e-47 |
| Msa0576400 | Msa0903730 | -0.802328 | 5.911615e-49 | -8.615850e-47 |
| Msa0576400 | Msa0907700 | -0.814128 | 1.804139e-51 | -8.615850e-47 |
| Msa0576400 | Msa0921630 | -0.820991 | 5.117466e-53 | -8.615850e-47 |
| Msa0576400 | Msa0925160 | -0.812134 | 4.938813e-51 | -8.615850e-47 |
| Msa0576400 | Msa0951720 | -0.833988 | 3.887011e-56 | -8.615850e-47 |
| Msa0576400 | Msa0961420 | 0.818743 | 1.671734e-52 | -8.615850e-47 |
| Msa0576400 | Msa0980440 | -0.804258 | 2.354920e-49 | -8.615850e-47 |
| Msa0576400 | Msa0981010 | -0.816662 | 4.927285e-52 | -8.615850e-47 |
| Msa0576400 | Msa0988500 | -0.840700 | 7.427044e-58 | -8.615850e-47 |
| Msa0576400 | Msa0989490 | 0.942610 | 5.293799e-102 | -8.615850e-47 |
| Msa0576400 | Msa1000470 | -0.813636 | 2.315791e-51 | -8.615850e-47 |
| Msa0576400 | Msa1008340 | -0.803104 | 4.087665e-49 | -8.615850e-47 |
| Msa0576400 | Msa1008490 | -0.842648 | 2.273753e-58 | -8.615850e-47 |
| Msa0576400 | Msa1009000 | -0.816405 | 5.623977e-52 | -8.615850e-47 |
| Msa0576400 | Msa1016110 | -0.813651 | 2.298122e-51 | -8.615850e-47 |
| Msa0576400 | Msa1020710 | -0.802895 | 4.514720e-49 | -8.615850e-47 |
| Msa0576400 | Msa1032350 | -0.803788 | 2.948704e-49 | -8.615850e-47 |
| Msa0576400 | Msa1033440 | 0.838908 | 2.174375e-57 | -8.615850e-47 |
| Msa0576400 | Msa1036390 | -0.816121 | 6.510891e-52 | -8.615850e-47 |
| Msa0576400 | Msa1049950 | -0.801379 | 9.257302e-49 | -8.615850e-47 |
| Msa0576400 | Msa1069300 | -0.827408 | 1.590552e-54 | -8.615850e-47 |
| Msa0576400 | Msa1073110 | 0.822638 | 2.128049e-53 | -8.615850e-47 |
| Msa0576400 | Msa1076680 | -0.815830 | 7.560175e-52 | -8.615850e-47 |
| Msa0576400 | Msa1080790 | -0.803613 | 3.206749e-49 | -8.615850e-47 |
| Msa0576400 | Msa1081600 | -0.839252 | 1.770334e-57 | -8.615850e-47 |
| Msa0576400 | Msa1081700 | -0.828520 | 8.590949e-55 | -8.615850e-47 |
| Msa0576400 | Msa1081850 | -0.802150 | 6.429957e-49 | -8.615850e-47 |
| Msa0576400 | Msa1083410 | -0.818269 | 2.140536e-52 | -8.615850e-47 |
| Msa0576400 | Msa1085960 | 0.824672 | 7.108894e-54 | -8.615850e-47 |
| Msa0576400 | Msa1087530 | -0.801793 | 7.615300e-49 | -8.615850e-47 |
| Msa0576400 | Msa1099030 | -0.823414 | 1.403061e-53 | -8.615850e-47 |
| Msa0576400 | Msa1118930 | -0.804950 | 1.688570e-49 | -8.615850e-47 |
| Msa0576400 | Msa1120540 | -0.823938 | 1.057552e-53 | -8.615850e-47 |
| Msa0576400 | Msa1140010 | -0.802541 | 5.343093e-49 | -8.615850e-47 |
| Msa0576400 | Msa1146150 | -0.807672 | 4.507562e-50 | -8.615850e-47 |
| Msa0576400 | Msa1151960 | -0.828391 | 9.226668e-55 | -8.615850e-47 |
| Msa0576400 | Msa1166370 | -0.835797 | 1.361622e-56 | -8.615850e-47 |
| Msa0576400 | Msa1184580 | -0.811354 | 7.300866e-51 | -8.615850e-47 |
| Msa0576400 | Msa1201990 | -0.834637 | 2.670990e-56 | -8.615850e-47 |
| Msa0576400 | Msa1204120 | -0.809771 | 1.604610e-50 | -8.615850e-47 |
| Msa0576400 | Msa1208070 | -0.812448 | 4.218303e-51 | -8.615850e-47 |
| Msa0576400 | Msa1208710 | -0.815656 | 8.267906e-52 | -8.615850e-47 |
| Msa0576400 | Msa1208760 | -0.811943 | 5.436468e-51 | -8.615850e-47 |
| Msa0576400 | Msa1212740 | -0.800691 | 1.279709e-48 | -8.615850e-47 |
| Msa0576400 | Msa1214900 | -0.800090 | 1.696501e-48 | -8.615850e-47 |
| Msa0576400 | Msa1220230 | -0.828088 | 1.092065e-54 | -8.615850e-47 |
| Msa0576400 | Msa1220710 | -0.833806 | 4.317105e-56 | -8.615850e-47 |
| Msa0576400 | Msa1221200 | 0.812657 | 3.796876e-51 | -8.615850e-47 |
| Msa0576400 | Msa1221570 | 0.823472 | 1.359978e-53 | -8.615850e-47 |
| Msa0576400 | Msa1226510 | -0.802704 | 4.945509e-49 | -8.615850e-47 |
| Msa0576400 | Msa1226600 | -0.808759 | 2.645330e-50 | -8.615850e-47 |
| Msa0576400 | Msa1233770 | -0.801951 | 7.064702e-49 | -8.615850e-47 |
| Msa0576400 | Msa1236760 | -0.800313 | 1.528122e-48 | -8.615850e-47 |
| Msa0576400 | Msa1238480 | -0.802191 | 6.307456e-49 | -8.615850e-47 |
| Msa0576400 | Msa1254770 | -0.811242 | 7.721372e-51 | -8.615850e-47 |
| Msa0576400 | Msa1254800 | -0.808135 | 3.593232e-50 | -8.615850e-47 |
| Msa0576400 | Msa1256540 | 0.805123 | 1.553920e-49 | -8.615850e-47 |
| Msa0576400 | Msa1258950 | -0.816079 | 6.652722e-52 | -8.615850e-47 |
| Msa0576400 | Msa1262310 | -0.838674 | 2.499821e-57 | -8.615850e-47 |
| Msa0576400 | Msa1265660 | -0.827698 | 1.355134e-54 | -8.615850e-47 |
| Msa0576400 | Msa1287160 | -0.805399 | 1.360170e-49 | -8.615850e-47 |
| Msa0576400 | Msa1295010 | -0.824025 | 1.009207e-53 | -8.615850e-47 |
| Msa0576400 | Msa1296960 | 0.809944 | 1.472856e-50 | -8.615850e-47 |
| Msa0576400 | Msa1303570 | -0.817147 | 3.834309e-52 | -8.615850e-47 |
| Msa0576400 | Msa1303640 | -0.831069 | 2.056922e-55 | -8.615850e-47 |
| Msa0576400 | Msa1323060 | -0.804195 | 2.426975e-49 | -8.615850e-47 |
| Msa0576400 | Msa1326000 | -0.821778 | 3.368805e-53 | -8.615850e-47 |
| Msa0576400 | Msa1329990 | -0.835866 | 1.307352e-56 | -8.615850e-47 |
| Msa0576400 | Msa1340620 | -0.807308 | 5.386469e-50 | -8.615850e-47 |
| Msa0576400 | Msa1355260 | -0.830198 | 3.360561e-55 | -8.615850e-47 |
| Msa0576400 | Msa1357170 | -0.805968 | 1.033222e-49 | -8.615850e-47 |
| Msa0576400 | Msa1358870 | 0.805420 | 1.346399e-49 | -8.615850e-47 |
| Msa0576400 | Msa1365040 | 0.815593 | 8.539291e-52 | -8.615850e-47 |
| Msa0576400 | Msa1370910 | 0.804466 | 2.131805e-49 | -8.615850e-47 |
| Msa0576400 | Msa1373950 | -0.816641 | 4.979636e-52 | -8.615850e-47 |
| Msa0576400 | Msa1385620 | -0.831723 | 1.420154e-55 | -8.615850e-47 |
| Msa0576400 | Msa1386020 | -0.809999 | 1.433674e-50 | -8.615850e-47 |
| Msa0576400 | Msa1386520 | -0.817740 | 2.819698e-52 | -8.615850e-47 |
| Msa0576400 | Msa1397110 | -0.806940 | 6.443000e-50 | -8.615850e-47 |
| Msa0576400 | Msa1397540 | -0.801543 | 8.570298e-49 | -8.615850e-47 |
| Msa0576400 | Msa1403900 | -0.803075 | 4.144344e-49 | -8.615850e-47 |
| Msa0576400 | Msa1405180 | -0.801564 | 8.483386e-49 | -8.615850e-47 |
| Msa0576400 | Msa1408190 | -0.802155 | 6.415378e-49 | -8.615850e-47 |
| Msa0576400 | Msa1409520 | -0.804555 | 2.042042e-49 | -8.615850e-47 |
| Msa0576400 | Msa1418200 | -0.819146 | 1.353797e-52 | -8.615850e-47 |
| Msa0576400 | Msa1428440 | -0.828014 | 1.137280e-54 | -8.615850e-47 |
| Msa0576400 | Msa1431000 | -0.808433 | 3.104921e-50 | -8.615850e-47 |
| Msa0576400 | Msa1438270 | -0.803665 | 3.128608e-49 | -8.615850e-47 |
| Msa0576400 | Msa1440180 | -0.800380 | 1.481050e-48 | -8.615850e-47 |
| Msa0576400 | Msa1448990 | -0.803160 | 3.979862e-49 | -8.615850e-47 |
| Msa0576400 | Msa1449740 | -0.802404 | 5.701856e-49 | -8.615850e-47 |
| Msa0576400 | Msa1450420 | -0.800120 | 1.672724e-48 | -8.615850e-47 |
| Msa0576400 | Msa1457670 | 0.825475 | 4.595037e-54 | -8.615850e-47 |
| Msa0576400 | Msa1463210 | -0.804554 | 2.042794e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0576400 | MtrunA17_Chr8g0390701 | 98.496 | 266 | 4 | 0 | 1 | 266 | 423 | 688 | 0.0 | 527 |
| Msa0576400 | MtrunA17_Chr6g0485101 | 43.770 | 313 | 108 | 10 | 4 | 266 | 404 | 698 | 1.62e-58 | 197 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0576400 | AT4G13350.1 | 39.899 | 198 | 92 | 8 | 75 | 266 | 426 | 602 | 6.72e-23 | 98.2 |
| Msa0576400 | AT4G13350.2 | 39.899 | 198 | 92 | 8 | 75 | 266 | 426 | 602 | 6.72e-23 | 98.2 |
| Msa0576400 | AT4G32630.2 | 34.010 | 197 | 118 | 7 | 75 | 265 | 437 | 627 | 4.51e-11 | 63.2 |
| Msa0576400 | AT4G32630.6 | 33.673 | 196 | 119 | 7 | 75 | 265 | 437 | 626 | 9.34e-11 | 62.4 |
| Msa0576400 | AT4G32630.4 | 33.673 | 196 | 119 | 7 | 75 | 265 | 437 | 626 | 9.34e-11 | 62.4 |
| Msa0576400 | AT4G32630.5 | 33.673 | 196 | 119 | 7 | 75 | 265 | 437 | 626 | 9.34e-11 | 62.4 |
| Msa0576400 | AT4G32630.3 | 33.673 | 196 | 119 | 7 | 75 | 265 | 437 | 626 | 9.34e-11 | 62.4 |
| Msa0576400 | AT4G32630.1 | 33.673 | 196 | 119 | 7 | 75 | 265 | 437 | 626 | 9.34e-11 | 62.4 |
Find 132 sgRNAs with CRISPR-Local
Find 218 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCCTGTAATCTTATTATTT+TGG | 0.158193 | 4_1:+80488612 | Msa0576400:three_prime_UTR |
| TGTAAATTATTTGTTGTTAT+AGG | 0.219132 | 4_1:+80488362 | Msa0576400:three_prime_UTR |
| GTTGCTTCATTAGCATCTTC+TGG | 0.220268 | 4_1:+80486053 | Msa0576400:five_prime_UTR |
| CCCATTGACAGGCAGATATT+TGG | 0.240230 | 4_1:-80488396 | None:intergenic |
| GGTAATGAGGGAGCTGCTTT+TGG | 0.276609 | 4_1:+80488093 | Msa0576400:CDS |
| CATCAAGGAATTGGGACTTT+TGG | 0.288342 | 4_1:+80488072 | Msa0576400:CDS |
| TACCAAAATAATAAGATTAC+AGG | 0.295172 | 4_1:-80488614 | None:intergenic |
| TGCAGGTGAAACAGATAAAA+AGG | 0.295174 | 4_1:-80485952 | None:intergenic |
| TGCTGCTGATACTGCAAATT+AGG | 0.317561 | 4_1:-80486116 | None:intergenic |
| CCCATTTGCCAGCCTGGGAC+TGG | 0.318787 | 4_1:-80486598 | None:intergenic |
| GTTGCACCCTTGTACAAATA+TGG | 0.326994 | 4_1:+80488255 | Msa0576400:three_prime_UTR |
| TCCAGTCCCAGGCTGGCAAA+TGG | 0.328210 | 4_1:+80486597 | Msa0576400:CDS |
| TGGGTAATCAATCTCTTTCC+TGG | 0.352906 | 4_1:+80487488 | Msa0576400:CDS |
| GGTGCACCCATTTGCCAGCC+TGG | 0.366079 | 4_1:-80486604 | None:intergenic |
| TGTTTCACCTGCAGGGCCTT+TGG | 0.366625 | 4_1:+80485962 | Msa0576400:five_prime_UTR |
| ATGTGTAGGCATCAAGGAAT+TGG | 0.372319 | 4_1:+80488063 | Msa0576400:intron |
| CCAGTCCCAGGCTGGCAAAT+GGG | 0.389187 | 4_1:+80486598 | Msa0576400:CDS |
| TGGCAAATGGGTGCACCGCC+TGG | 0.389286 | 4_1:+80486610 | Msa0576400:CDS |
| CTTACGGTTGGGGCTTGAAC+TGG | 0.391763 | 4_1:-80486843 | None:intergenic |
| TCCTTCCCTGCTCCAGTCCC+AGG | 0.393386 | 4_1:+80486586 | Msa0576400:CDS |
| TGCCAGCCTGGGACTGGAGC+AGG | 0.395880 | 4_1:-80486592 | None:intergenic |
| TTCACCTGCAGGGCCTTTGG+CGG | 0.396650 | 4_1:+80485965 | Msa0576400:five_prime_UTR |
| TAACGAGGAGGGTGGATTCC+AGG | 0.405464 | 4_1:-80487506 | None:intergenic |
| TCACCTGCAGGGCCTTTGGC+GGG | 0.416171 | 4_1:+80485966 | Msa0576400:five_prime_UTR |
| AATGGGTGCACCGCCTGGCA+TGG | 0.419401 | 4_1:+80486615 | Msa0576400:CDS |
| GCCAAATATCTGCCTGTCAA+TGG | 0.421035 | 4_1:+80488395 | Msa0576400:three_prime_UTR |
| GTGTCTACAGTAGAAGTTTG+TGG | 0.426996 | 4_1:-80486408 | None:intergenic |
| CATTTCTCAAAGGTTGTCAA+TGG | 0.435836 | 4_1:+80486366 | Msa0576400:CDS |
| GGTTCGTTGATCACATCAAA+TGG | 0.440527 | 4_1:-80486816 | None:intergenic |
| CCTTGGCATTGGCACATTAG+TGG | 0.445671 | 4_1:-80487699 | None:intergenic |
| GGTGTAGATTGTTGAATAGT+AGG | 0.446180 | 4_1:-80486170 | None:intergenic |
| TCCCTGCTCCAGTCCCAGGC+TGG | 0.447450 | 4_1:+80486590 | Msa0576400:CDS |
| GGAAGTTCATTTCTTCCACT+TGG | 0.447805 | 4_1:-80486435 | None:intergenic |
| AGCATGTTAAATTAACTGTT+TGG | 0.451221 | 4_1:+80488658 | Msa0576400:three_prime_UTR |
| GATTGATTACCCATGTTTGA+AGG | 0.460288 | 4_1:-80487478 | None:intergenic |
| ATTTCTCAAAGGTTGTCAAT+GGG | 0.460296 | 4_1:+80486367 | Msa0576400:CDS |
| CCAAATATCTGCCTGTCAAT+GGG | 0.464451 | 4_1:+80488396 | Msa0576400:three_prime_UTR |
| ACTTTAAACCCCTTCCCTGC+AGG | 0.470044 | 4_1:+80488165 | Msa0576400:CDS |
| CCTTGCAAAGATGACATAGA+AGG | 0.470966 | 4_1:-80487418 | None:intergenic |
| GATGTTCACAGTTGGAGCTC+CGG | 0.474090 | 4_1:-80486009 | None:intergenic |
| ATTGAAATTACTTACGGTTG+GGG | 0.477287 | 4_1:-80486853 | None:intergenic |
| CATATTCATGCCTCAGCAAT+GGG | 0.480130 | 4_1:+80487559 | Msa0576400:CDS |
| CCTTCTATGTCATCTTTGCA+AGG | 0.482591 | 4_1:+80487418 | Msa0576400:CDS |
| GATCCCGCCAAAGGCCCTGC+AGG | 0.482680 | 4_1:-80485969 | None:intergenic |
| TGTGTAGGCATCAAGGAATT+GGG | 0.485262 | 4_1:+80488064 | Msa0576400:intron |
| TAAAATCTCAGGGGCGTACA+TGG | 0.485361 | 4_1:+80487664 | Msa0576400:intron |
| GCCTGGGACTGGAGCAGGGA+AGG | 0.486363 | 4_1:-80486587 | None:intergenic |
| CCGAATGGATTACCTCCTGC+AGG | 0.494585 | 4_1:-80488180 | None:intergenic |
| TGCAGTAAACCCTTCAAACA+TGG | 0.495545 | 4_1:+80487468 | Msa0576400:CDS |
| GTTGGGGCTTGAACTGGTGT+TGG | 0.503130 | 4_1:-80486837 | None:intergenic |
| GTGCACCCATTTGCCAGCCT+GGG | 0.503540 | 4_1:-80486603 | None:intergenic |
| AAATGTGGCACTAGCGTGCT+TGG | 0.504258 | 4_1:-80486348 | None:intergenic |
| CTTGGCATTGGCACATTAGT+GGG | 0.504879 | 4_1:-80487698 | None:intergenic |
| TGTTGTTATAGGAAAGATGA+AGG | 0.509927 | 4_1:+80488373 | Msa0576400:three_prime_UTR |
| CAATTACTCGTCTAGGCGAA+AGG | 0.511824 | 4_1:-80488474 | None:intergenic |
| ACTTCAACCATATTTGTACA+AGG | 0.512210 | 4_1:-80488262 | None:intergenic |
| TTATTCAAAGCTCCACCTAC+TGG | 0.512473 | 4_1:-80486194 | None:intergenic |
| ATGGGTGCACCGCCTGGCAT+GGG | 0.517111 | 4_1:+80486616 | Msa0576400:CDS |
| AATATAGATCAGCAACTGAA+TGG | 0.517650 | 4_1:+80488123 | Msa0576400:CDS |
| GCTAATGAAGCAACACTGGA+TGG | 0.520961 | 4_1:-80486044 | None:intergenic |
| TGGATTACCTCCTGCAGGGA+AGG | 0.529326 | 4_1:-80488175 | None:intergenic |
| CCTGCAGGAGGTAATCCATT+CGG | 0.529389 | 4_1:+80488180 | Msa0576400:CDS |
| AATTACTCGTCTAGGCGAAA+GGG | 0.535512 | 4_1:-80488473 | None:intergenic |
| GATTACCTCCTGCAGGGAAG+GGG | 0.535685 | 4_1:-80488173 | None:intergenic |
| TGATACTGCAAATTAGGCCA+TGG | 0.537541 | 4_1:-80486110 | None:intergenic |
| ACATATTCATGCCTCAGCAA+TGG | 0.538067 | 4_1:+80487558 | Msa0576400:CDS |
| ATAGTGTGTTATGGTGATCA+TGG | 0.538561 | 4_1:+80488535 | Msa0576400:three_prime_UTR |
| TGAAATAGTTACCTTGGCAT+TGG | 0.541368 | 4_1:-80487710 | None:intergenic |
| AACTGAATGTGTAGGCATCA+AGG | 0.543374 | 4_1:+80488057 | Msa0576400:intron |
| ATGATGACCGATCTCTATGC+TGG | 0.544642 | 4_1:-80488319 | None:intergenic |
| CCTAAAACAATTACTCGTCT+AGG | 0.545508 | 4_1:-80488481 | None:intergenic |
| ACTGTACGACTCCCATTGAC+AGG | 0.549231 | 4_1:-80488407 | None:intergenic |
| TTTGTAGATTGTGATGGTTG+TGG | 0.549399 | 4_1:-80486792 | None:intergenic |
| GGATTACCTCCTGCAGGGAA+GGG | 0.552909 | 4_1:-80488174 | None:intergenic |
| CATGGGAGTGCATTATTGAA+AGG | 0.553116 | 4_1:-80486092 | None:intergenic |
| GAAGGGTTTACTGCAGCTGA+AGG | 0.554095 | 4_1:-80487460 | None:intergenic |
| GTTTCCTCTCGACTAAAGAA+TGG | 0.554597 | 4_1:-80488293 | None:intergenic |
| ATTGATTACCCATGTTTGAA+GGG | 0.554638 | 4_1:-80487477 | None:intergenic |
| AGATGCTAATGAAGCAACAC+TGG | 0.561491 | 4_1:-80486048 | None:intergenic |
| GGGTGCAACAAATTGATGCT+TGG | 0.562779 | 4_1:-80488241 | None:intergenic |
| AGGTGGAGCTTTGAATAACC+AGG | 0.563485 | 4_1:+80486199 | Msa0576400:CDS |
| GTTGCGAAGATGTTCACAGT+TGG | 0.565416 | 4_1:-80486017 | None:intergenic |
| TGAGCTGATGAATTCGAGAA+AGG | 0.569428 | 4_1:+80488440 | Msa0576400:three_prime_UTR |
| AGATGCTTAATAGTGTGTTA+TGG | 0.570213 | 4_1:+80488526 | Msa0576400:three_prime_UTR |
| TGTACCATTCTTTAGTCGAG+AGG | 0.571743 | 4_1:+80488289 | Msa0576400:three_prime_UTR |
| TAGATCAGCAACTGAATGGT+AGG | 0.571969 | 4_1:+80488127 | Msa0576400:CDS |
| AATGGATTTGTAGATTGTGA+TGG | 0.576263 | 4_1:-80486798 | None:intergenic |
| TGAACTGAGACACCCATGCC+AGG | 0.578979 | 4_1:-80486628 | None:intergenic |
| GCAGCTGAAGGCGCTACACT+AGG | 0.581634 | 4_1:-80487448 | None:intergenic |
| AGCATCTTCTGGATTGACAA+TGG | 0.582951 | 4_1:+80486064 | Msa0576400:exon |
| CTAATGAAGCAACACTGGAT+GGG | 0.584550 | 4_1:-80486043 | None:intergenic |
| TTGACAACCTTTGAGAAATG+TGG | 0.587864 | 4_1:-80486363 | None:intergenic |
| TCAGCTCTTACTGCTACTGC+CGG | 0.589167 | 4_1:+80485990 | Msa0576400:five_prime_UTR |
| GCCAGCCTGGGACTGGAGCA+GGG | 0.589815 | 4_1:-80486591 | None:intergenic |
| GAAGGGGTTTAAAGTAGCAG+AGG | 0.592775 | 4_1:-80488157 | None:intergenic |
| GATACTGCAAATTAGGCCAT+GGG | 0.593319 | 4_1:-80486109 | None:intergenic |
| TTTCTCAAAGGTTGTCAATG+GGG | 0.599288 | 4_1:+80486368 | Msa0576400:CDS |
| AAATCTTAAGATCATCCGAA+TGG | 0.599296 | 4_1:-80488195 | None:intergenic |
| CAACAAATAATTTACAAGCA+AGG | 0.601128 | 4_1:-80488355 | None:intergenic |
| CCACTAATGTGCCAATGCCA+AGG | 0.601289 | 4_1:+80487699 | Msa0576400:CDS |
| GCATCTGACGCTACAACACA+AGG | 0.601374 | 4_1:-80488509 | None:intergenic |
| CCGTTGTTCACATCTGCTGT+TGG | 0.610741 | 4_1:+80486143 | Msa0576400:CDS |
| TGTGCTTGTGGAGGGAGCGT+TGG | 0.610899 | 4_1:-80487538 | None:intergenic |
| TTAAACCCCTTCCCTGCAGG+AGG | 0.611118 | 4_1:+80488168 | Msa0576400:CDS |
| CAATCTACACCACCAGTAGG+TGG | 0.623047 | 4_1:+80486182 | Msa0576400:CDS |
| AGTTCAATATAATAATGTGA+TGG | 0.625728 | 4_1:+80486645 | Msa0576400:CDS |
| GAGGCATGAATATGTGCTTG+TGG | 0.625753 | 4_1:-80487550 | None:intergenic |
| CTTTCAATAATGCACTCCCA+TGG | 0.627451 | 4_1:+80486093 | Msa0576400:CDS |
| GCTAGTGCCACATTTCTCAA+AGG | 0.627904 | 4_1:+80486356 | Msa0576400:CDS |
| TTCAAAGCTCCACCTACTGG+TGG | 0.631043 | 4_1:-80486191 | None:intergenic |
| GCAGTAAACCCTTCAAACAT+GGG | 0.631363 | 4_1:+80487469 | Msa0576400:CDS |
| GCAACTGAATGGTAGGTCGT+CGG | 0.633722 | 4_1:+80488134 | Msa0576400:CDS |
| CTTCAACCATATTTGTACAA+GGG | 0.637860 | 4_1:-80488261 | None:intergenic |
| AAACACTCCAGCATAGAGAT+CGG | 0.638162 | 4_1:+80488312 | Msa0576400:three_prime_UTR |
| ACTGTAGACACAAAACCAAG+TGG | 0.639870 | 4_1:+80486420 | Msa0576400:CDS |
| TGTGATGGTTGTGGAAAACT+CGG | 0.641253 | 4_1:-80486783 | None:intergenic |
| GCATATGATAACGAGGAGGG+TGG | 0.642199 | 4_1:-80487514 | None:intergenic |
| CAAAGAATAATAATACAACC+AGG | 0.642380 | 4_1:-80488572 | None:intergenic |
| CATGAATATGTGCTTGTGGA+GGG | 0.642440 | 4_1:-80487546 | None:intergenic |
| CGAATGGATTACCTCCTGCA+GGG | 0.644063 | 4_1:-80488179 | None:intergenic |
| TGGAAGAAATGAACTTCCTG+AGG | 0.645779 | 4_1:+80486440 | Msa0576400:CDS |
| AATGTTACGATACTGCTCAA+AGG | 0.646749 | 4_1:-80485914 | None:intergenic |
| CGTTGGTGCATATGATAACG+AGG | 0.649957 | 4_1:-80487521 | None:intergenic |
| TGGTTGTGGAAAACTCGGCA+TGG | 0.650360 | 4_1:-80486778 | None:intergenic |
| GTAAGAGCTGATCCCGCCAA+AGG | 0.656856 | 4_1:-80485978 | None:intergenic |
| GGTGCATATGATAACGAGGA+GGG | 0.662239 | 4_1:-80487517 | None:intergenic |
| CAACAATCTACACCACCAGT+AGG | 0.664477 | 4_1:+80486179 | Msa0576400:CDS |
| GCATGAATATGTGCTTGTGG+AGG | 0.669871 | 4_1:-80487547 | None:intergenic |
| TATACTTGGTCCCATTGCTG+AGG | 0.675665 | 4_1:-80487569 | None:intergenic |
| TGGTGCATATGATAACGAGG+AGG | 0.724647 | 4_1:-80487518 | None:intergenic |
| ACTGAGACACCCATGCCAGG+CGG | 0.743510 | 4_1:-80486625 | None:intergenic |
| CCAACAGCAGATGTGAACAA+CGG | 0.748816 | 4_1:-80486143 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ACATAAATTGAAATTACTTA+CGG | - | chr4_1:80486862-80486881 | None:intergenic | 15.0% |
| !! | GAATCATTATTAATTACTAT+CGG | + | chr4_1:80486955-80486974 | Msa0576400:intron | 15.0% |
| !! | TTCTTATTATTAATACGATA+AGG | - | chr4_1:80487143-80487162 | None:intergenic | 15.0% |
| !! | GTATTAATAATAAGAATGAT+GGG | + | chr4_1:80487147-80487166 | Msa0576400:intron | 15.0% |
| !! | AAATTAATCTAACTTAAAAC+AGG | - | chr4_1:80487763-80487782 | None:intergenic | 15.0% |
| !! | GTAAATTTATTATGATTGTA+TGG | + | chr4_1:80487984-80488003 | Msa0576400:intron | 15.0% |
| !!! | TGTAAATTATTTGTTGTTAT+AGG | + | chr4_1:80488362-80488381 | Msa0576400:three_prime_UTR | 15.0% |
| !!! | TAATCTTATTATTTTGGTAA+AGG | + | chr4_1:80488618-80488637 | Msa0576400:three_prime_UTR | 15.0% |
| !! | AGTTCAATATAATAATGTGA+TGG | + | chr4_1:80486645-80486664 | Msa0576400:CDS | 20.0% |
| !! | CGTATTAATAATAAGAATGA+TGG | + | chr4_1:80487146-80487165 | Msa0576400:intron | 20.0% |
| !! | AGGCAAAAAAATAATTGATT+GGG | - | chr4_1:80487609-80487628 | None:intergenic | 20.0% |
| !! | TAGGCAAAAAAATAATTGAT+TGG | - | chr4_1:80487610-80487629 | None:intergenic | 20.0% |
| !! | AAATAAAGTTCAAATAGCAT+AGG | - | chr4_1:80487629-80487648 | None:intergenic | 20.0% |
| !!! | TTAGATTAATTTTTTGCTCT+TGG | + | chr4_1:80487771-80487790 | Msa0576400:intron | 20.0% |
| !! | TGTGTGTTTATTATGAATAA+CGG | - | chr4_1:80487864-80487883 | None:intergenic | 20.0% |
| !!! | TTCCTGTAATCTTATTATTT+TGG | + | chr4_1:80488612-80488631 | Msa0576400:three_prime_UTR | 20.0% |
| !! | TACCAAAATAATAAGATTAC+AGG | - | chr4_1:80488617-80488636 | None:intergenic | 20.0% |
| ! | AATTGAAATTACTTACGGTT+GGG | - | chr4_1:80486857-80486876 | None:intergenic | 25.0% |
| ! | AAATTGAAATTACTTACGGT+TGG | - | chr4_1:80486858-80486877 | None:intergenic | 25.0% |
| ! | CATTATTAATTACTATCGGT+TGG | + | chr4_1:80486959-80486978 | Msa0576400:intron | 25.0% |
| ! | ATATATTTATCTTCCACCAA+TGG | - | chr4_1:80487023-80487042 | None:intergenic | 25.0% |
| ! | AAAACTCAATAACTTAACAG+AGG | - | chr4_1:80487059-80487078 | None:intergenic | 25.0% |
| ! | CTATTAAAGAAAGCAATCTT+CGG | - | chr4_1:80487115-80487134 | None:intergenic | 25.0% |
| ! | AAGATTGCTTTCTTTAATAG+AGG | + | chr4_1:80487115-80487134 | Msa0576400:intron | 25.0% |
| ! | TTTATCATCTGACATTGAAA+AGG | + | chr4_1:80487205-80487224 | Msa0576400:intron | 25.0% |
| !! | TTTTCCTAACATAAATTGAC+AGG | - | chr4_1:80487309-80487328 | None:intergenic | 25.0% |
| ! | TATGTTAGGAAAACAGATAA+TGG | + | chr4_1:80487316-80487335 | Msa0576400:intron | 25.0% |
| ! | TGCATTAACTGAAAGAATTA+TGG | - | chr4_1:80487353-80487372 | None:intergenic | 25.0% |
| !! | GAAATGATAAAAGGTATACT+TGG | - | chr4_1:80487586-80487605 | None:intergenic | 25.0% |
| ! | GGCAAAAAAATAATTGATTG+GGG | - | chr4_1:80487608-80487627 | None:intergenic | 25.0% |
| ! | ATGCAAACAGTAAATAGATA+TGG | - | chr4_1:80487738-80487757 | None:intergenic | 25.0% |
| ! | GTGTGTTTATTATGAATAAC+GGG | - | chr4_1:80487863-80487882 | None:intergenic | 25.0% |
| ! | ACACTGAATATATAGAATTG+AGG | - | chr4_1:80487897-80487916 | None:intergenic | 25.0% |
| ! | TTTGTGAAGTAATCTGTTTA+AGG | + | chr4_1:80487962-80487981 | Msa0576400:intron | 25.0% |
| !!! | TGGATAGAGTTGATAATTAT+TGG | + | chr4_1:80488004-80488023 | Msa0576400:intron | 25.0% |
| ! | CAACAAATAATTTACAAGCA+AGG | - | chr4_1:80488358-80488377 | None:intergenic | 25.0% |
| !!! | ATGGTTGTATTTTTTTTTCC+TGG | + | chr4_1:80488554-80488573 | Msa0576400:three_prime_UTR | 25.0% |
| ! | CAAAGAATAATAATACAACC+AGG | - | chr4_1:80488575-80488594 | None:intergenic | 25.0% |
| !!! | ATTCTTTGATTTTGCTATTC+TGG | + | chr4_1:80488587-80488606 | Msa0576400:three_prime_UTR | 25.0% |
| ! | AGCATGTTAAATTAACTGTT+TGG | + | chr4_1:80488658-80488677 | Msa0576400:three_prime_UTR | 25.0% |
| ! | CTGAGTGATATTTCTATGAA+AGG | - | chr4_1:80486289-80486308 | None:intergenic | 30.0% |
| ATTTCTCAAAGGTTGTCAAT+GGG | + | chr4_1:80486367-80486386 | Msa0576400:CDS | 30.0% | |
| TAAGAAAATGTATCATGCTG+TGG | - | chr4_1:80486734-80486753 | None:intergenic | 30.0% | |
| ! | AATGGATTTGTAGATTGTGA+TGG | - | chr4_1:80486801-80486820 | None:intergenic | 30.0% |
| ATTGAAATTACTTACGGTTG+GGG | - | chr4_1:80486856-80486875 | None:intergenic | 30.0% | |
| TCACAAAACCTATGTAAAAG+AGG | - | chr4_1:80486925-80486944 | None:intergenic | 30.0% | |
| !! | TAATAAGAATGATGGGTAAC+TGG | + | chr4_1:80487154-80487173 | Msa0576400:intron | 30.0% |
| ATTGCCTGTCAATTTATGTT+AGG | + | chr4_1:80487302-80487321 | Msa0576400:intron | 30.0% | |
| ! | TTTGGTTGATGCTTTATGAT+TGG | + | chr4_1:80487376-80487395 | Msa0576400:intron | 30.0% |
| ATTGATTACCCATGTTTGAA+GGG | - | chr4_1:80487480-80487499 | None:intergenic | 30.0% | |
| TTGATTGGGGAAATGATAAA+AGG | - | chr4_1:80487595-80487614 | None:intergenic | 30.0% | |
| ATAAACCGTGTAAAATCTCA+GGG | + | chr4_1:80487654-80487673 | Msa0576400:intron | 30.0% | |
| !!! | AATTTTTTGCTCTTGGAAAG+TGG | + | chr4_1:80487778-80487797 | Msa0576400:intron | 30.0% |
| !! | GAGTTGATAATTATTGGTTG+TGG | + | chr4_1:80488010-80488029 | Msa0576400:intron | 30.0% |
| AATATAGATCAGCAACTGAA+TGG | + | chr4_1:80488123-80488142 | Msa0576400:CDS | 30.0% | |
| AAATCTTAAGATCATCCGAA+TGG | - | chr4_1:80488198-80488217 | None:intergenic | 30.0% | |
| ! | TGATCTTAAGATTTTCTGCT+CGG | + | chr4_1:80488204-80488223 | Msa0576400:exon | 30.0% |
| CTTCAACCATATTTGTACAA+GGG | - | chr4_1:80488264-80488283 | None:intergenic | 30.0% | |
| ACTTCAACCATATTTGTACA+AGG | - | chr4_1:80488265-80488284 | None:intergenic | 30.0% | |
| TGTTGTTATAGGAAAGATGA+AGG | + | chr4_1:80488373-80488392 | Msa0576400:three_prime_UTR | 30.0% | |
| AGATGCTTAATAGTGTGTTA+TGG | + | chr4_1:80488526-80488545 | Msa0576400:three_prime_UTR | 30.0% | |
| ! | GTAAAGGTCTTTTCTATTCA+TGG | + | chr4_1:80488634-80488653 | Msa0576400:three_prime_UTR | 30.0% |
| AATGTTACGATACTGCTCAA+AGG | - | chr4_1:80485917-80485936 | None:intergenic | 35.0% | |
| TGCAGGTGAAACAGATAAAA+AGG | - | chr4_1:80485955-80485974 | None:intergenic | 35.0% | |
| ! | TTTTTATCTGTTTCACCTGC+AGG | + | chr4_1:80485954-80485973 | Msa0576400:five_prime_UTR | 35.0% |
| ! | TTTTATCTGTTTCACCTGCA+GGG | + | chr4_1:80485955-80485974 | Msa0576400:five_prime_UTR | 35.0% |
| GGTGTAGATTGTTGAATAGT+AGG | - | chr4_1:80486173-80486192 | None:intergenic | 35.0% | |
| ! | TTGACAACCTTTGAGAAATG+TGG | - | chr4_1:80486366-80486385 | None:intergenic | 35.0% |
| CATTTCTCAAAGGTTGTCAA+TGG | + | chr4_1:80486366-80486385 | Msa0576400:CDS | 35.0% | |
| TTTCTCAAAGGTTGTCAATG+GGG | + | chr4_1:80486368-80486387 | Msa0576400:CDS | 35.0% | |
| TAAGAAGTCGATAATACCTC+AGG | - | chr4_1:80486459-80486478 | None:intergenic | 35.0% | |
| AAAGCGGTAAGCTAATGATT+TGG | - | chr4_1:80486682-80486701 | None:intergenic | 35.0% | |
| ! | CCACGGATTAAGTTATAAAG+CGG | - | chr4_1:80486698-80486717 | None:intergenic | 35.0% |
| TTTGTAGATTGTGATGGTTG+TGG | - | chr4_1:80486795-80486814 | None:intergenic | 35.0% | |
| ! | GCACATTTCCTCTTTTACAT+AGG | + | chr4_1:80486914-80486933 | Msa0576400:intron | 35.0% |
| !! | ATTACTATCGGTTGGTGATT+TGG | + | chr4_1:80486967-80486986 | Msa0576400:intron | 35.0% |
| ! | CTTTCAGTTAATGCACGTTT+TGG | + | chr4_1:80487358-80487377 | Msa0576400:intron | 35.0% |
| ATAGAAGGAAACTGCATTCA+AGG | - | chr4_1:80487406-80487425 | None:intergenic | 35.0% | |
| GATTGATTACCCATGTTTGA+AGG | - | chr4_1:80487481-80487500 | None:intergenic | 35.0% | |
| CATAAACCGTGTAAAATCTC+AGG | + | chr4_1:80487653-80487672 | Msa0576400:intron | 35.0% | |
| TAAACCGTGTAAAATCTCAG+GGG | + | chr4_1:80487655-80487674 | Msa0576400:intron | 35.0% | |
| TGAAATAGTTACCTTGGCAT+TGG | - | chr4_1:80487713-80487732 | None:intergenic | 35.0% | |
| ! | ATGGACTGAAATAGTTACCT+TGG | - | chr4_1:80487719-80487738 | None:intergenic | 35.0% |
| !!! | AATTGGGACTTTTGGTAATG+AGG | + | chr4_1:80488080-80488099 | Msa0576400:CDS | 35.0% |
| !!! | ATTGGGACTTTTGGTAATGA+GGG | + | chr4_1:80488081-80488100 | Msa0576400:CDS | 35.0% |
| CCTAAAACAATTACTCGTCT+AGG | - | chr4_1:80488484-80488503 | None:intergenic | 35.0% | |
| ! | CCTAGACGAGTAATTGTTTT+AGG | + | chr4_1:80488481-80488500 | Msa0576400:three_prime_UTR | 35.0% |
| ATAGTGTGTTATGGTGATCA+TGG | + | chr4_1:80488535-80488554 | Msa0576400:three_prime_UTR | 35.0% | |
| CTAATGAAGCAACACTGGAT+GGG | - | chr4_1:80486046-80486065 | None:intergenic | 40.0% | |
| AGATGCTAATGAAGCAACAC+TGG | - | chr4_1:80486051-80486070 | None:intergenic | 40.0% | |
| GTTGCTTCATTAGCATCTTC+TGG | + | chr4_1:80486053-80486072 | Msa0576400:five_prime_UTR | 40.0% | |
| AGCATCTTCTGGATTGACAA+TGG | + | chr4_1:80486064-80486083 | Msa0576400:exon | 40.0% | |
| ! | CATGGGAGTGCATTATTGAA+AGG | - | chr4_1:80486095-80486114 | None:intergenic | 40.0% |
| CTTTCAATAATGCACTCCCA+TGG | + | chr4_1:80486093-80486112 | Msa0576400:CDS | 40.0% | |
| GATACTGCAAATTAGGCCAT+GGG | - | chr4_1:80486112-80486131 | None:intergenic | 40.0% | |
| TGATACTGCAAATTAGGCCA+TGG | - | chr4_1:80486113-80486132 | None:intergenic | 40.0% | |
| TGCTGCTGATACTGCAAATT+AGG | - | chr4_1:80486119-80486138 | None:intergenic | 40.0% | |
| TTATTCAAAGCTCCACCTAC+TGG | - | chr4_1:80486197-80486216 | None:intergenic | 40.0% | |
| GCGTCTTAATAAGACAAACC+TGG | - | chr4_1:80486220-80486239 | None:intergenic | 40.0% | |
| GGGAACAGAAGATGTATTAC+AGG | - | chr4_1:80486313-80486332 | None:intergenic | 40.0% | |
| GTGTCTACAGTAGAAGTTTG+TGG | - | chr4_1:80486411-80486430 | None:intergenic | 40.0% | |
| ACTGTAGACACAAAACCAAG+TGG | + | chr4_1:80486420-80486439 | Msa0576400:CDS | 40.0% | |
| GGAAGTTCATTTCTTCCACT+TGG | - | chr4_1:80486438-80486457 | None:intergenic | 40.0% | |
| TGGAAGAAATGAACTTCCTG+AGG | + | chr4_1:80486440-80486459 | Msa0576400:CDS | 40.0% | |
| CCGCTTTATAACTTAATCCG+TGG | + | chr4_1:80486695-80486714 | Msa0576400:intron | 40.0% | |
| TGTGATGGTTGTGGAAAACT+CGG | - | chr4_1:80486786-80486805 | None:intergenic | 40.0% | |
| GGTTCGTTGATCACATCAAA+TGG | - | chr4_1:80486819-80486838 | None:intergenic | 40.0% | |
| AATGTGCACAAACTATCACC+AGG | - | chr4_1:80486901-80486920 | None:intergenic | 40.0% | |
| CTAAAGCACATCATGCACTT+TGG | - | chr4_1:80486998-80487017 | None:intergenic | 40.0% | |
| !! | ATGATGTGCTTTAGAGCCAT+TGG | + | chr4_1:80487004-80487023 | Msa0576400:intron | 40.0% |
| GATGGGTAACTGGTATATGA+TGG | + | chr4_1:80487164-80487183 | Msa0576400:intron | 40.0% | |
| TCATCTGACATTGAAAAGGC+TGG | + | chr4_1:80487209-80487228 | Msa0576400:intron | 40.0% | |
| AAAGGCTGGAATGTTGAAGT+AGG | + | chr4_1:80487223-80487242 | Msa0576400:intron | 40.0% | |
| CCTTGCAAAGATGACATAGA+AGG | - | chr4_1:80487421-80487440 | None:intergenic | 40.0% | |
| CCTTCTATGTCATCTTTGCA+AGG | + | chr4_1:80487418-80487437 | Msa0576400:CDS | 40.0% | |
| TGCAGTAAACCCTTCAAACA+TGG | + | chr4_1:80487468-80487487 | Msa0576400:CDS | 40.0% | |
| GCAGTAAACCCTTCAAACAT+GGG | + | chr4_1:80487469-80487488 | Msa0576400:CDS | 40.0% | |
| TGGGTAATCAATCTCTTTCC+TGG | + | chr4_1:80487488-80487507 | Msa0576400:CDS | 40.0% | |
| CATGAATATGTGCTTGTGGA+GGG | - | chr4_1:80487549-80487568 | None:intergenic | 40.0% | |
| ACATATTCATGCCTCAGCAA+TGG | + | chr4_1:80487558-80487577 | Msa0576400:CDS | 40.0% | |
| CATATTCATGCCTCAGCAAT+GGG | + | chr4_1:80487559-80487578 | Msa0576400:CDS | 40.0% | |
| ! | ATTCAGTGTTGTTGCTTGAG+TGG | + | chr4_1:80487908-80487927 | Msa0576400:intron | 40.0% |
| ! | TTCAGTGTTGTTGCTTGAGT+GGG | + | chr4_1:80487909-80487928 | Msa0576400:intron | 40.0% |
| ACACATTCAGTTACGTGTCA+AGG | - | chr4_1:80488049-80488068 | None:intergenic | 40.0% | |
| TGACACGTAACTGAATGTGT+AGG | + | chr4_1:80488049-80488068 | Msa0576400:intron | 40.0% | |
| AACTGAATGTGTAGGCATCA+AGG | + | chr4_1:80488057-80488076 | Msa0576400:intron | 40.0% | |
| ATGTGTAGGCATCAAGGAAT+TGG | + | chr4_1:80488063-80488082 | Msa0576400:intron | 40.0% | |
| TGTGTAGGCATCAAGGAATT+GGG | + | chr4_1:80488064-80488083 | Msa0576400:intron | 40.0% | |
| ! | CATCAAGGAATTGGGACTTT+TGG | + | chr4_1:80488072-80488091 | Msa0576400:CDS | 40.0% |
| TAGATCAGCAACTGAATGGT+AGG | + | chr4_1:80488127-80488146 | Msa0576400:CDS | 40.0% | |
| GTTGCACCCTTGTACAAATA+TGG | + | chr4_1:80488255-80488274 | Msa0576400:three_prime_UTR | 40.0% | |
| TGTACCATTCTTTAGTCGAG+AGG | + | chr4_1:80488289-80488308 | Msa0576400:three_prime_UTR | 40.0% | |
| GTTTCCTCTCGACTAAAGAA+TGG | - | chr4_1:80488296-80488315 | None:intergenic | 40.0% | |
| AAACACTCCAGCATAGAGAT+CGG | + | chr4_1:80488312-80488331 | Msa0576400:three_prime_UTR | 40.0% | |
| CCAAATATCTGCCTGTCAAT+GGG | + | chr4_1:80488396-80488415 | Msa0576400:three_prime_UTR | 40.0% | |
| TGAGCTGATGAATTCGAGAA+AGG | + | chr4_1:80488440-80488459 | Msa0576400:three_prime_UTR | 40.0% | |
| AATTACTCGTCTAGGCGAAA+GGG | - | chr4_1:80488476-80488495 | None:intergenic | 40.0% | |
| GTTGCGAAGATGTTCACAGT+TGG | - | chr4_1:80486020-80486039 | None:intergenic | 45.0% | |
| GCTAATGAAGCAACACTGGA+TGG | - | chr4_1:80486047-80486066 | None:intergenic | 45.0% | |
| CCAACAGCAGATGTGAACAA+CGG | - | chr4_1:80486146-80486165 | None:intergenic | 45.0% | |
| CAACAATCTACACCACCAGT+AGG | + | chr4_1:80486179-80486198 | Msa0576400:CDS | 45.0% | |
| !! | AGGTGGAGCTTTGAATAACC+AGG | + | chr4_1:80486199-80486218 | Msa0576400:CDS | 45.0% |
| GCTAGTGCCACATTTCTCAA+AGG | + | chr4_1:80486356-80486375 | Msa0576400:CDS | 45.0% | |
| TCTTTCGCTGTGATTTCTGC+AGG | + | chr4_1:80486540-80486559 | Msa0576400:intron | 45.0% | |
| AATGTATCATGCTGTGGCAC+TGG | - | chr4_1:80486728-80486747 | None:intergenic | 45.0% | |
| ! | TCGGCATGGACTGTAACAAT+GGG | - | chr4_1:80486767-80486786 | None:intergenic | 45.0% |
| !! | ATGTGCTTTAGAGCCATTGG+TGG | + | chr4_1:80487007-80487026 | Msa0576400:intron | 45.0% |
| ! | GGTGCATATGATAACGAGGA+GGG | - | chr4_1:80487520-80487539 | None:intergenic | 45.0% |
| ! | TGGTGCATATGATAACGAGG+AGG | - | chr4_1:80487521-80487540 | None:intergenic | 45.0% |
| ! | CGTTGGTGCATATGATAACG+AGG | - | chr4_1:80487524-80487543 | None:intergenic | 45.0% |
| GCATGAATATGTGCTTGTGG+AGG | - | chr4_1:80487550-80487569 | None:intergenic | 45.0% | |
| GAGGCATGAATATGTGCTTG+TGG | - | chr4_1:80487553-80487572 | None:intergenic | 45.0% | |
| TATACTTGGTCCCATTGCTG+AGG | - | chr4_1:80487572-80487591 | None:intergenic | 45.0% | |
| ! | TACGCCCCTGAGATTTTACA+CGG | - | chr4_1:80487662-80487681 | None:intergenic | 45.0% |
| ! | TAAAATCTCAGGGGCGTACA+TGG | + | chr4_1:80487664-80487683 | Msa0576400:intron | 45.0% |
| !! | CTTGGCATTGGCACATTAGT+GGG | - | chr4_1:80487701-80487720 | None:intergenic | 45.0% |
| ! | GAAGGGGTTTAAAGTAGCAG+AGG | - | chr4_1:80488160-80488179 | None:intergenic | 45.0% |
| GGGTGCAACAAATTGATGCT+TGG | - | chr4_1:80488244-80488263 | None:intergenic | 45.0% | |
| ATGATGACCGATCTCTATGC+TGG | - | chr4_1:80488322-80488341 | None:intergenic | 45.0% | |
| GCCAAATATCTGCCTGTCAA+TGG | + | chr4_1:80488395-80488414 | Msa0576400:three_prime_UTR | 45.0% | |
| CCCATTGACAGGCAGATATT+TGG | - | chr4_1:80488399-80488418 | None:intergenic | 45.0% | |
| CAATTACTCGTCTAGGCGAA+AGG | - | chr4_1:80488477-80488496 | None:intergenic | 45.0% | |
| TCAGCTCTTACTGCTACTGC+CGG | + | chr4_1:80485990-80486009 | Msa0576400:five_prime_UTR | 50.0% | |
| GATGTTCACAGTTGGAGCTC+CGG | - | chr4_1:80486012-80486031 | None:intergenic | 50.0% | |
| CCGTTGTTCACATCTGCTGT+TGG | + | chr4_1:80486143-80486162 | Msa0576400:CDS | 50.0% | |
| CAATCTACACCACCAGTAGG+TGG | + | chr4_1:80486182-80486201 | Msa0576400:CDS | 50.0% | |
| TTCAAAGCTCCACCTACTGG+TGG | - | chr4_1:80486194-80486213 | None:intergenic | 50.0% | |
| ATCTTCTGTTCCCGCGATAC+AGG | + | chr4_1:80486320-80486339 | Msa0576400:intron | 50.0% | |
| TCTTCTGTTCCCGCGATACA+GGG | + | chr4_1:80486321-80486340 | Msa0576400:intron | 50.0% | |
| AAATGTGGCACTAGCGTGCT+TGG | - | chr4_1:80486351-80486370 | None:intergenic | 50.0% | |
| !! | GTGGCACTGGCATATAACCA+CGG | - | chr4_1:80486715-80486734 | None:intergenic | 50.0% |
| ! | CTCGGCATGGACTGTAACAA+TGG | - | chr4_1:80486768-80486787 | None:intergenic | 50.0% |
| TGGTTGTGGAAAACTCGGCA+TGG | - | chr4_1:80486781-80486800 | None:intergenic | 50.0% | |
| GTACTAGTGTGTAGTACGCC+TGG | + | chr4_1:80486880-80486899 | Msa0576400:intron | 50.0% | |
| GAAGGGTTTACTGCAGCTGA+AGG | - | chr4_1:80487463-80487482 | None:intergenic | 50.0% | |
| ! | GCATATGATAACGAGGAGGG+TGG | - | chr4_1:80487517-80487536 | None:intergenic | 50.0% |
| !! | CCTTGGCATTGGCACATTAG+TGG | - | chr4_1:80487702-80487721 | None:intergenic | 50.0% |
| CCACTAATGTGCCAATGCCA+AGG | + | chr4_1:80487699-80487718 | Msa0576400:CDS | 50.0% | |
| !! | GGTAATGAGGGAGCTGCTTT+TGG | + | chr4_1:80488093-80488112 | Msa0576400:CDS | 50.0% |
| GCAACTGAATGGTAGGTCGT+CGG | + | chr4_1:80488134-80488153 | Msa0576400:CDS | 50.0% | |
| ACTTTAAACCCCTTCCCTGC+AGG | + | chr4_1:80488165-80488184 | Msa0576400:CDS | 50.0% | |
| !! | CGAATGGATTACCTCCTGCA+GGG | - | chr4_1:80488182-80488201 | None:intergenic | 50.0% |
| CCTGCAGGAGGTAATCCATT+CGG | + | chr4_1:80488180-80488199 | Msa0576400:CDS | 50.0% | |
| ACTGTACGACTCCCATTGAC+AGG | - | chr4_1:80488410-80488429 | None:intergenic | 50.0% | |
| GCATCTGACGCTACAACACA+AGG | - | chr4_1:80488512-80488531 | None:intergenic | 50.0% | |
| TGTTTCACCTGCAGGGCCTT+TGG | + | chr4_1:80485962-80485981 | Msa0576400:five_prime_UTR | 55.0% | |
| GTAAGAGCTGATCCCGCCAA+AGG | - | chr4_1:80485981-80486000 | None:intergenic | 55.0% | |
| CTTCTGTTCCCGCGATACAG+GGG | + | chr4_1:80486322-80486341 | Msa0576400:intron | 55.0% | |
| TGAACTGAGACACCCATGCC+AGG | - | chr4_1:80486631-80486650 | None:intergenic | 55.0% | |
| GTTGGGGCTTGAACTGGTGT+TGG | - | chr4_1:80486840-80486859 | None:intergenic | 55.0% | |
| CTTACGGTTGGGGCTTGAAC+TGG | - | chr4_1:80486846-80486865 | None:intergenic | 55.0% | |
| ! | TAACGAGGAGGGTGGATTCC+AGG | - | chr4_1:80487509-80487528 | None:intergenic | 55.0% |
| TTAAACCCCTTCCCTGCAGG+AGG | + | chr4_1:80488168-80488187 | Msa0576400:CDS | 55.0% | |
| GATTACCTCCTGCAGGGAAG+GGG | - | chr4_1:80488176-80488195 | None:intergenic | 55.0% | |
| GGATTACCTCCTGCAGGGAA+GGG | - | chr4_1:80488177-80488196 | None:intergenic | 55.0% | |
| TGGATTACCTCCTGCAGGGA+AGG | - | chr4_1:80488178-80488197 | None:intergenic | 55.0% | |
| !! | CCGAATGGATTACCTCCTGC+AGG | - | chr4_1:80488183-80488202 | None:intergenic | 55.0% |
| TTCACCTGCAGGGCCTTTGG+CGG | + | chr4_1:80485965-80485984 | Msa0576400:five_prime_UTR | 60.0% | |
| CTTGGATGCCCCTGTATCGC+GGG | - | chr4_1:80486333-80486352 | None:intergenic | 60.0% | |
| GCTTGGATGCCCCTGTATCG+CGG | - | chr4_1:80486334-80486353 | None:intergenic | 60.0% | |
| TCCAGTCCCAGGCTGGCAAA+TGG | + | chr4_1:80486597-80486616 | Msa0576400:CDS | 60.0% | |
| CCAGTCCCAGGCTGGCAAAT+GGG | + | chr4_1:80486598-80486617 | Msa0576400:CDS | 60.0% | |
| GTGCACCCATTTGCCAGCCT+GGG | - | chr4_1:80486606-80486625 | None:intergenic | 60.0% | |
| ACTGAGACACCCATGCCAGG+CGG | - | chr4_1:80486628-80486647 | None:intergenic | 60.0% | |
| !! | GCAGCTGAAGGCGCTACACT+AGG | - | chr4_1:80487451-80487470 | None:intergenic | 60.0% |
| ! | TGTGCTTGTGGAGGGAGCGT+TGG | - | chr4_1:80487541-80487560 | None:intergenic | 60.0% |
| TCACCTGCAGGGCCTTTGGC+GGG | + | chr4_1:80485966-80485985 | Msa0576400:five_prime_UTR | 65.0% | |
| TCCTTCCCTGCTCCAGTCCC+AGG | + | chr4_1:80486586-80486605 | Msa0576400:CDS | 65.0% | |
| CCCATTTGCCAGCCTGGGAC+TGG | - | chr4_1:80486601-80486620 | None:intergenic | 65.0% | |
| GGTGCACCCATTTGCCAGCC+TGG | - | chr4_1:80486607-80486626 | None:intergenic | 65.0% | |
| TGGCAAATGGGTGCACCGCC+TGG | + | chr4_1:80486610-80486629 | Msa0576400:CDS | 65.0% | |
| AATGGGTGCACCGCCTGGCA+TGG | + | chr4_1:80486615-80486634 | Msa0576400:CDS | 65.0% | |
| ATGGGTGCACCGCCTGGCAT+GGG | + | chr4_1:80486616-80486635 | Msa0576400:CDS | 65.0% | |
| GATCCCGCCAAAGGCCCTGC+AGG | - | chr4_1:80485972-80485991 | None:intergenic | 70.0% | |
| GCCTGGGACTGGAGCAGGGA+AGG | - | chr4_1:80486590-80486609 | None:intergenic | 70.0% | |
| TCCCTGCTCCAGTCCCAGGC+TGG | + | chr4_1:80486590-80486609 | Msa0576400:CDS | 70.0% | |
| GCCAGCCTGGGACTGGAGCA+GGG | - | chr4_1:80486594-80486613 | None:intergenic | 70.0% | |
| TGCCAGCCTGGGACTGGAGC+AGG | - | chr4_1:80486595-80486614 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_1 | gene | 80485899 | 80488687 | 80485899 | ID=Msa0576400;Name=Msa0576400 |
| chr4_1 | mRNA | 80485899 | 80488687 | 80485899 | ID=Msa0576400-mRNA-1;Parent=Msa0576400;Name=Msa0576400-mRNA-1;_AED=0.04;_eAED=0.04;_QI=184|1|1|1|1|1|7|481|266 |
| chr4_1 | exon | 80485899 | 80486220 | 80485899 | ID=Msa0576400-mRNA-1:exon:28785;Parent=Msa0576400-mRNA-1 |
| chr4_1 | exon | 80486342 | 80486461 | 80486342 | ID=Msa0576400-mRNA-1:exon:28786;Parent=Msa0576400-mRNA-1 |
| chr4_1 | exon | 80486562 | 80486666 | 80486562 | ID=Msa0576400-mRNA-1:exon:28787;Parent=Msa0576400-mRNA-1 |
| chr4_1 | exon | 80486777 | 80486860 | 80486777 | ID=Msa0576400-mRNA-1:exon:28788;Parent=Msa0576400-mRNA-1 |
| chr4_1 | exon | 80487415 | 80487586 | 80487415 | ID=Msa0576400-mRNA-1:exon:28789;Parent=Msa0576400-mRNA-1 |
| chr4_1 | exon | 80487675 | 80487720 | 80487675 | ID=Msa0576400-mRNA-1:exon:28790;Parent=Msa0576400-mRNA-1 |
| chr4_1 | exon | 80488071 | 80488687 | 80488071 | ID=Msa0576400-mRNA-1:exon:28791;Parent=Msa0576400-mRNA-1 |
| chr4_1 | five_prime_UTR | 80485899 | 80486082 | 80485899 | ID=Msa0576400-mRNA-1:five_prime_utr;Parent=Msa0576400-mRNA-1 |
| chr4_1 | CDS | 80486083 | 80486220 | 80486083 | ID=Msa0576400-mRNA-1:cds;Parent=Msa0576400-mRNA-1 |
| chr4_1 | CDS | 80486342 | 80486461 | 80486342 | ID=Msa0576400-mRNA-1:cds;Parent=Msa0576400-mRNA-1 |
| chr4_1 | CDS | 80486562 | 80486666 | 80486562 | ID=Msa0576400-mRNA-1:cds;Parent=Msa0576400-mRNA-1 |
| chr4_1 | CDS | 80486777 | 80486860 | 80486777 | ID=Msa0576400-mRNA-1:cds;Parent=Msa0576400-mRNA-1 |
| chr4_1 | CDS | 80487415 | 80487586 | 80487415 | ID=Msa0576400-mRNA-1:cds;Parent=Msa0576400-mRNA-1 |
| chr4_1 | CDS | 80487675 | 80487720 | 80487675 | ID=Msa0576400-mRNA-1:cds;Parent=Msa0576400-mRNA-1 |
| chr4_1 | CDS | 80488071 | 80488206 | 80488071 | ID=Msa0576400-mRNA-1:cds;Parent=Msa0576400-mRNA-1 |
| chr4_1 | three_prime_UTR | 80488207 | 80488687 | 80488207 | ID=Msa0576400-mRNA-1:three_prime_utr;Parent=Msa0576400-mRNA-1 |
| Gene Sequence |
| Protein sequence |
