Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1371580 | PNY12007.1 | 86.807 | 379 | 46 | 1 | 1 | 375 | 1 | 379 | 0.0 | 689 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1371580 | sp|B9FSC8|OPR11_ORYSJ | 65.205 | 365 | 125 | 2 | 13 | 377 | 4 | 366 | 1.40e-180 | 508 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1371580 | A0A2K3P9Q7 | 86.807 | 379 | 46 | 1 | 1 | 375 | 1 | 379 | 0.0 | 689 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0006700 | Msa1371580 | 0.801342 | 9.420313e-49 | -8.615850e-47 |
| Msa0015100 | Msa1371580 | 0.823525 | 1.321969e-53 | -8.615850e-47 |
| Msa0049330 | Msa1371580 | 0.801410 | 9.124543e-49 | -8.615850e-47 |
| Msa0049770 | Msa1371580 | 0.827166 | 1.818190e-54 | -8.615850e-47 |
| Msa0051100 | Msa1371580 | 0.810007 | 1.428028e-50 | -8.615850e-47 |
| Msa0051200 | Msa1371580 | 0.811188 | 7.933359e-51 | -8.615850e-47 |
| Msa0051460 | Msa1371580 | 0.831621 | 1.504878e-55 | -8.615850e-47 |
| Msa0071240 | Msa1371580 | 0.815119 | 1.088580e-51 | -8.615850e-47 |
| Msa0071550 | Msa1371580 | 0.841842 | 3.717913e-58 | -8.615850e-47 |
| Msa0071910 | Msa1371580 | -0.827342 | 1.649141e-54 | -8.615850e-47 |
| Msa0077390 | Msa1371580 | 0.813884 | 2.042079e-51 | -8.615850e-47 |
| Msa0088550 | Msa1371580 | 0.820357 | 7.158357e-53 | -8.615850e-47 |
| Msa0089350 | Msa1371580 | 0.811303 | 7.490299e-51 | -8.615850e-47 |
| Msa0101840 | Msa1371580 | 0.808166 | 3.539315e-50 | -8.615850e-47 |
| Msa0111310 | Msa1371580 | 0.809238 | 2.088461e-50 | -8.615850e-47 |
| Msa0120340 | Msa1371580 | 0.811604 | 6.443363e-51 | -8.615850e-47 |
| Msa1369530 | Msa1371580 | 0.825465 | 4.619320e-54 | -8.615850e-47 |
| Msa1370630 | Msa1371580 | 0.814240 | 1.703943e-51 | -8.615850e-47 |
| Msa1371580 | Msa1377070 | 0.816890 | 4.379642e-52 | -8.615850e-47 |
| Msa1371580 | Msa1379710 | 0.995322 | 4.009256e-215 | -8.615850e-47 |
| Msa1371580 | Msa1382930 | 0.806715 | 7.189038e-50 | -8.615850e-47 |
| Msa1371580 | Msa1401290 | 0.803841 | 2.874952e-49 | -8.615850e-47 |
| Msa1371580 | Msa1424510 | 0.833383 | 5.504182e-56 | -8.615850e-47 |
| Msa1371580 | Msa1427830 | 0.813311 | 2.729365e-51 | -8.615850e-47 |
| Msa1371580 | Msa1438820 | 0.814415 | 1.558729e-51 | -8.615850e-47 |
| Msa1371580 | Msa1438910 | 0.807146 | 5.829781e-50 | -8.615850e-47 |
| Msa1371580 | Msa1444250 | -0.820297 | 7.387746e-53 | -8.615850e-47 |
| Msa1371580 | Msa1445250 | 0.804522 | 2.075102e-49 | -8.615850e-47 |
| Msa1371580 | Msa1451620 | -0.824575 | 7.493781e-54 | -8.615850e-47 |
| Msa1371580 | Msa1458550 | 0.817126 | 3.875431e-52 | -8.615850e-47 |
| Msa1371580 | Msa1462840 | 0.802175 | 6.354390e-49 | -8.615850e-47 |
| Msa0607540 | Msa1371580 | 0.855207 | 7.364767e-62 | -8.615850e-47 |
| Msa0617370 | Msa1371580 | 0.806206 | 9.203936e-50 | -8.615850e-47 |
| Msa0629890 | Msa1371580 | 0.807810 | 4.213853e-50 | -8.615850e-47 |
| Msa0640380 | Msa1371580 | 0.858621 | 7.266565e-63 | -8.615850e-47 |
| Msa0641020 | Msa1371580 | 0.816186 | 6.295627e-52 | -8.615850e-47 |
| Msa0647830 | Msa1371580 | 0.854217 | 1.425877e-61 | -8.615850e-47 |
| Msa0650290 | Msa1371580 | 0.850487 | 1.644722e-60 | -8.615850e-47 |
| Msa0662650 | Msa1371580 | 0.823042 | 1.713782e-53 | -8.615850e-47 |
| Msa0678820 | Msa1371580 | 0.879371 | 1.315886e-69 | -8.615850e-47 |
| Msa0690440 | Msa1371580 | 0.856026 | 4.247245e-62 | -8.615850e-47 |
| Msa0692200 | Msa1371580 | 0.827165 | 1.818946e-54 | -8.615850e-47 |
| Msa0697140 | Msa1371580 | 0.811039 | 8.545513e-51 | -8.615850e-47 |
| Msa0698310 | Msa1371580 | -0.818118 | 2.316113e-52 | -8.615850e-47 |
| Msa0708860 | Msa1371580 | 0.827388 | 1.608006e-54 | -8.615850e-47 |
| Msa0716740 | Msa1371580 | -0.801199 | 1.008007e-48 | -8.615850e-47 |
| Msa0722930 | Msa1371580 | 0.856829 | 2.469765e-62 | -8.615850e-47 |
| Msa0723140 | Msa1371580 | 0.847252 | 1.300375e-59 | -8.615850e-47 |
| Msa0724560 | Msa1371580 | 0.844033 | 9.711224e-59 | -8.615850e-47 |
| Msa0731710 | Msa1371580 | 0.815687 | 8.137895e-52 | -8.615850e-47 |
| Msa0756310 | Msa1371580 | 0.800809 | 1.210854e-48 | -8.615850e-47 |
| Msa0757080 | Msa1371580 | 0.800825 | 1.201961e-48 | -8.615850e-47 |
| Msa0837510 | Msa1371580 | -0.801158 | 1.027200e-48 | -8.615850e-47 |
| Msa0135360 | Msa1371580 | 0.820637 | 6.175559e-53 | -8.615850e-47 |
| Msa0143920 | Msa1371580 | 0.820527 | 6.544502e-53 | -8.615850e-47 |
| Msa0147920 | Msa1371580 | 0.870471 | 1.423617e-66 | -8.615850e-47 |
| Msa0162810 | Msa1371580 | 0.826533 | 2.575342e-54 | -8.615850e-47 |
| Msa0164360 | Msa1371580 | 0.800375 | 1.484586e-48 | -8.615850e-47 |
| Msa0178350 | Msa1371580 | 0.806711 | 7.204371e-50 | -8.615850e-47 |
| Msa0178860 | Msa1371580 | -0.818483 | 1.914304e-52 | -8.615850e-47 |
| Msa0179860 | Msa1371580 | 0.821899 | 3.158214e-53 | -8.615850e-47 |
| Msa0185640 | Msa1371580 | -0.820931 | 5.283990e-53 | -8.615850e-47 |
| Msa0191010 | Msa1371580 | 0.820438 | 6.858411e-53 | -8.615850e-47 |
| Msa0191630 | Msa1371580 | 0.834889 | 2.308239e-56 | -8.615850e-47 |
| Msa0198440 | Msa1371580 | 0.814153 | 1.781080e-51 | -8.615850e-47 |
| Msa0223380 | Msa1371580 | 0.817524 | 3.153384e-52 | -8.615850e-47 |
| Msa0233310 | Msa1371580 | 0.831983 | 1.225173e-55 | -8.615850e-47 |
| Msa1228160 | Msa1371580 | -0.808226 | 3.437079e-50 | -8.615850e-47 |
| Msa1228310 | Msa1371580 | 0.833722 | 4.528604e-56 | -8.615850e-47 |
| Msa1233500 | Msa1371580 | 0.841428 | 4.781892e-58 | -8.615850e-47 |
| Msa1256540 | Msa1371580 | -0.822214 | 2.670485e-53 | -8.615850e-47 |
| Msa1258380 | Msa1371580 | -0.826756 | 2.278258e-54 | -8.615850e-47 |
| Msa1271200 | Msa1371580 | 0.854173 | 1.468583e-61 | -8.615850e-47 |
| Msa1275770 | Msa1371580 | 0.807907 | 4.019004e-50 | -8.615850e-47 |
| Msa1279210 | Msa1371580 | 0.800574 | 1.351884e-48 | -8.615850e-47 |
| Msa1296960 | Msa1371580 | -0.823287 | 1.502093e-53 | -8.615850e-47 |
| Msa1300350 | Msa1371580 | -0.804080 | 2.564975e-49 | -8.615850e-47 |
| Msa1304840 | Msa1371580 | 0.811220 | 7.805200e-51 | -8.615850e-47 |
| Msa1307740 | Msa1371580 | 0.832722 | 8.037295e-56 | -8.615850e-47 |
| Msa1308480 | Msa1371580 | 0.827022 | 1.967584e-54 | -8.615850e-47 |
| Msa1316560 | Msa1371580 | -0.817168 | 3.792240e-52 | -8.615850e-47 |
| Msa1322190 | Msa1371580 | 0.828909 | 6.917288e-55 | -8.615850e-47 |
| Msa1335970 | Msa1371580 | -0.814250 | 1.695701e-51 | -8.615850e-47 |
| Msa0366470 | Msa1371580 | 0.811995 | 5.297396e-51 | -8.615850e-47 |
| Msa0371420 | Msa1371580 | -0.834241 | 3.358955e-56 | -8.615850e-47 |
| Msa0379820 | Msa1371580 | 0.810257 | 1.261354e-50 | -8.615850e-47 |
| Msa0389360 | Msa1371580 | 0.848428 | 6.166711e-60 | -8.615850e-47 |
| Msa0389810 | Msa1371580 | 0.843549 | 1.308444e-58 | -8.615850e-47 |
| Msa0411000 | Msa1371580 | 0.814890 | 1.223433e-51 | -8.615850e-47 |
| Msa0414070 | Msa1371580 | 0.827361 | 1.631991e-54 | -8.615850e-47 |
| Msa0419620 | Msa1371580 | -0.844078 | 9.448028e-59 | -8.615850e-47 |
| Msa0429170 | Msa1371580 | 0.802242 | 6.155928e-49 | -8.615850e-47 |
| Msa0431520 | Msa1371580 | 0.806033 | 1.000906e-49 | -8.615850e-47 |
| Msa0431830 | Msa1371580 | 0.805388 | 1.367199e-49 | -8.615850e-47 |
| Msa0438050 | Msa1371580 | 0.838105 | 3.504538e-57 | -8.615850e-47 |
| Msa0442850 | Msa1371580 | 0.816981 | 4.177251e-52 | -8.615850e-47 |
| Msa0444090 | Msa1371580 | 0.813682 | 2.262547e-51 | -8.615850e-47 |
| Msa0454940 | Msa1371580 | 0.826251 | 3.006507e-54 | -8.615850e-47 |
| Msa0455230 | Msa1371580 | 0.815742 | 7.910273e-52 | -8.615850e-47 |
| Msa0457010 | Msa1371580 | 0.801746 | 7.786110e-49 | -8.615850e-47 |
| Msa0459120 | Msa1371580 | 0.826945 | 2.052542e-54 | -8.615850e-47 |
| Msa0464900 | Msa1371580 | 0.811970 | 5.362619e-51 | -8.615850e-47 |
| Msa0465680 | Msa1371580 | -0.863138 | 3.083832e-64 | -8.615850e-47 |
| Msa0468130 | Msa1371580 | 0.823757 | 1.166333e-53 | -8.615850e-47 |
| Msa0482190 | Msa1371580 | -0.828979 | 6.651236e-55 | -8.615850e-47 |
| Msa0982270 | Msa1371580 | 0.835666 | 1.469720e-56 | -8.615850e-47 |
| Msa0999040 | Msa1371580 | 0.813060 | 3.097868e-51 | -8.615850e-47 |
| Msa1000020 | Msa1371580 | 0.849897 | 2.407090e-60 | -8.615850e-47 |
| Msa1002480 | Msa1371580 | 0.815941 | 7.142975e-52 | -8.615850e-47 |
| Msa1005420 | Msa1371580 | 0.802261 | 6.101857e-49 | -8.615850e-47 |
| Msa1021340 | Msa1371580 | 0.854887 | 9.126114e-62 | -8.615850e-47 |
| Msa1037700 | Msa1371580 | -0.805087 | 1.580938e-49 | -8.615850e-47 |
| Msa1039880 | Msa1371580 | 0.801968 | 7.010746e-49 | -8.615850e-47 |
| Msa1054410 | Msa1371580 | 0.868695 | 5.391711e-66 | -8.615850e-47 |
| Msa1075080 | Msa1371580 | -0.803801 | 2.931418e-49 | -8.615850e-47 |
| Msa1080790 | Msa1371580 | 0.865920 | 4.161481e-65 | -8.615850e-47 |
| Msa1085960 | Msa1371580 | -0.810220 | 1.284251e-50 | -8.615850e-47 |
| Msa1091670 | Msa1371580 | 0.810735 | 9.943117e-51 | -8.615850e-47 |
| Msa1092090 | Msa1371580 | 0.821023 | 5.031506e-53 | -8.615850e-47 |
| Msa1105270 | Msa1371580 | 0.815902 | 7.287557e-52 | -8.615850e-47 |
| Msa0240780 | Msa1371580 | 0.816673 | 4.899608e-52 | -8.615850e-47 |
| Msa0265210 | Msa1371580 | 0.802296 | 6.001027e-49 | -8.615850e-47 |
| Msa0269450 | Msa1371580 | 0.813444 | 2.551537e-51 | -8.615850e-47 |
| Msa0278670 | Msa1371580 | 0.815711 | 8.037878e-52 | -8.615850e-47 |
| Msa0280660 | Msa1371580 | -0.810459 | 1.140826e-50 | -8.615850e-47 |
| Msa0303200 | Msa1371580 | 0.801935 | 7.121300e-49 | -8.615850e-47 |
| Msa0326670 | Msa1371580 | 0.808474 | 3.042225e-50 | -8.615850e-47 |
| Msa0342340 | Msa1371580 | -0.815597 | 8.520941e-52 | -8.615850e-47 |
| Msa0344830 | Msa1371580 | 0.812774 | 3.579637e-51 | -8.615850e-47 |
| Msa0362430 | Msa1371580 | 0.822310 | 2.536122e-53 | -8.615850e-47 |
| Msa0363460 | Msa1371580 | 0.818660 | 1.745170e-52 | -8.615850e-47 |
| Msa1118930 | Msa1371580 | 0.870757 | 1.146667e-66 | -8.615850e-47 |
| Msa1125080 | Msa1371580 | 0.809916 | 1.493613e-50 | -8.615850e-47 |
| Msa1141250 | Msa1371580 | -0.844021 | 9.783905e-59 | -8.615850e-47 |
| Msa1142500 | Msa1371580 | 0.804332 | 2.272532e-49 | -8.615850e-47 |
| Msa1142850 | Msa1371580 | -0.801567 | 8.473106e-49 | -8.615850e-47 |
| Msa1148720 | Msa1371580 | 0.860104 | 2.606748e-63 | -8.615850e-47 |
| Msa1148750 | Msa1371580 | 0.848032 | 7.933908e-60 | -8.615850e-47 |
| Msa1157020 | Msa1371580 | 0.802260 | 6.105447e-49 | -8.615850e-47 |
| Msa1167220 | Msa1371580 | 0.803113 | 4.070228e-49 | -8.615850e-47 |
| Msa1204160 | Msa1371580 | -0.818122 | 2.311437e-52 | -8.615850e-47 |
| Msa1204190 | Msa1371580 | -0.802195 | 6.296086e-49 | -8.615850e-47 |
| Msa1204980 | Msa1371580 | -0.820069 | 8.335406e-53 | -8.615850e-47 |
| Msa1205010 | Msa1371580 | -0.822645 | 2.120705e-53 | -8.615850e-47 |
| Msa1205130 | Msa1371580 | 0.820072 | 8.321697e-53 | -8.615850e-47 |
| Msa1208180 | Msa1371580 | 0.824130 | 9.537419e-54 | -8.615850e-47 |
| Msa1208340 | Msa1371580 | 0.830184 | 3.387958e-55 | -8.615850e-47 |
| Msa1211390 | Msa1371580 | 0.800771 | 1.232477e-48 | -8.615850e-47 |
| Msa1213440 | Msa1371580 | -0.806638 | 7.463843e-50 | -8.615850e-47 |
| Msa1217810 | Msa1371580 | 0.832983 | 6.921570e-56 | -8.615850e-47 |
| Msa0485500 | Msa1371580 | -0.825588 | 4.318755e-54 | -8.615850e-47 |
| Msa0491500 | Msa1371580 | 0.801719 | 7.884678e-49 | -8.615850e-47 |
| Msa0502910 | Msa1371580 | 0.845863 | 3.115206e-59 | -8.615850e-47 |
| Msa0505660 | Msa1371580 | 0.817116 | 3.896472e-52 | -8.615850e-47 |
| Msa0511720 | Msa1371580 | -0.826355 | 2.839518e-54 | -8.615850e-47 |
| Msa0524890 | Msa1371580 | -0.813806 | 2.124300e-51 | -8.615850e-47 |
| Msa0527250 | Msa1371580 | 0.999910 | 0.000000e+00 | -8.615850e-47 |
| Msa0528970 | Msa1371580 | 0.831026 | 2.107319e-55 | -8.615850e-47 |
| Msa0540070 | Msa1371580 | 0.810259 | 1.260161e-50 | -8.615850e-47 |
| Msa0543900 | Msa1371580 | 0.871606 | 6.012898e-67 | -8.615850e-47 |
| Msa0553460 | Msa1371580 | 0.861289 | 1.138806e-63 | -8.615850e-47 |
| Msa0561130 | Msa1371580 | -0.807054 | 6.094808e-50 | -8.615850e-47 |
| Msa0562650 | Msa1371580 | 0.808976 | 2.377309e-50 | -8.615850e-47 |
| Msa0563140 | Msa1371580 | 0.811243 | 7.715712e-51 | -8.615850e-47 |
| Msa0564510 | Msa1371580 | 0.804775 | 1.837428e-49 | -8.615850e-47 |
| Msa0576990 | Msa1371580 | -0.817278 | 3.583492e-52 | -8.615850e-47 |
| Msa0599580 | Msa1371580 | 0.854632 | 1.081725e-61 | -8.615850e-47 |
| Msa0599770 | Msa1371580 | 0.871458 | 6.729178e-67 | -8.615850e-47 |
| Msa0843280 | Msa1371580 | 0.840055 | 1.095059e-57 | -8.615850e-47 |
| Msa0844900 | Msa1371580 | 0.806519 | 7.909119e-50 | -8.615850e-47 |
| Msa0848900 | Msa1371580 | 0.843109 | 1.715117e-58 | -8.615850e-47 |
| Msa0900200 | Msa1371580 | 0.834069 | 3.709807e-56 | -8.615850e-47 |
| Msa0908170 | Msa1371580 | 0.808649 | 2.792563e-50 | -8.615850e-47 |
| Msa0910980 | Msa1371580 | -0.804356 | 2.247280e-49 | -8.615850e-47 |
| Msa0919520 | Msa1371580 | 0.854895 | 9.075266e-62 | -8.615850e-47 |
| Msa0927670 | Msa1371580 | 0.814485 | 1.504020e-51 | -8.615850e-47 |
| Msa0944550 | Msa1371580 | 0.802971 | 4.355697e-49 | -8.615850e-47 |
| Msa0951720 | Msa1371580 | 0.820090 | 8.242207e-53 | -8.615850e-47 |
| Msa0961420 | Msa1371580 | -0.836104 | 1.137537e-56 | -8.615850e-47 |
| Msa0965520 | Msa1371580 | 0.859896 | 3.011422e-63 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1371580 | MtrunA17_Chr3g0144001 | 75.946 | 370 | 83 | 3 | 7 | 376 | 1 | 364 | 0.0 | 591 |
| Msa1371580 | MtrunA17_Chr5g0394891 | 67.213 | 366 | 118 | 2 | 10 | 375 | 6 | 369 | 0.0 | 525 |
| Msa1371580 | MtrunA17_Chr5g0394771 | 66.942 | 363 | 112 | 4 | 13 | 375 | 37 | 391 | 1.94e-180 | 506 |
| Msa1371580 | MtrunA17_Chr5g0394841 | 65.110 | 364 | 123 | 3 | 14 | 375 | 10 | 371 | 1.25e-178 | 501 |
| Msa1371580 | MtrunA17_Chr5g0394861 | 66.209 | 364 | 119 | 3 | 14 | 375 | 10 | 371 | 1.90e-177 | 498 |
| Msa1371580 | MtrunA17_Chr5g0394751 | 65.746 | 362 | 116 | 4 | 14 | 375 | 6 | 359 | 1.69e-176 | 495 |
| Msa1371580 | MtrunA17_Chr5g0394811 | 65.470 | 362 | 123 | 2 | 14 | 375 | 119 | 478 | 1.90e-175 | 497 |
| Msa1371580 | MtrunA17_Chr5g0394811 | 77.320 | 97 | 22 | 0 | 22 | 118 | 1 | 97 | 8.70e-47 | 166 |
| Msa1371580 | MtrunA17_Chr5g0395841 | 60.916 | 371 | 140 | 3 | 4 | 374 | 5 | 370 | 2.08e-168 | 475 |
| Msa1371580 | MtrunA17_Chr4g0070561 | 52.022 | 371 | 165 | 4 | 16 | 374 | 19 | 388 | 4.73e-135 | 391 |
| Msa1371580 | MtrunA17_Chr5g0394791 | 61.932 | 176 | 59 | 2 | 5 | 180 | 2 | 169 | 4.54e-70 | 218 |
| Msa1371580 | MtrunA17_Chr5g0394801 | 51.852 | 189 | 62 | 2 | 179 | 367 | 26 | 185 | 6.19e-60 | 194 |
| Msa1371580 | MtrunA17_Chr3g0130471 | 58.182 | 55 | 20 | 1 | 198 | 252 | 1 | 52 | 2.87e-14 | 68.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1371580 | AT1G76690.1 | 64.171 | 374 | 128 | 3 | 6 | 377 | 4 | 373 | 0.0 | 508 |
| Msa1371580 | AT1G76680.1 | 65.229 | 371 | 123 | 3 | 9 | 377 | 5 | 371 | 0.0 | 508 |
| Msa1371580 | AT1G76680.2 | 61.111 | 396 | 123 | 4 | 9 | 377 | 5 | 396 | 2.64e-175 | 494 |
| Msa1371580 | AT1G09400.1 | 64.134 | 329 | 107 | 3 | 22 | 348 | 1 | 320 | 1.26e-156 | 443 |
| Msa1371580 | AT1G09400.2 | 65.056 | 269 | 83 | 3 | 82 | 348 | 2 | 261 | 1.60e-127 | 367 |
| Msa1371580 | AT2G06050.2 | 48.819 | 381 | 178 | 5 | 10 | 374 | 6 | 385 | 1.26e-125 | 367 |
| Msa1371580 | AT2G06050.1 | 48.819 | 381 | 178 | 5 | 10 | 374 | 6 | 385 | 1.26e-125 | 367 |
| Msa1371580 | AT2G06050.3 | 48.819 | 381 | 178 | 5 | 10 | 374 | 6 | 385 | 1.26e-125 | 367 |
| Msa1371580 | AT1G17990.1 | 58.781 | 279 | 102 | 4 | 8 | 285 | 1 | 267 | 4.44e-119 | 346 |
| Msa1371580 | AT1G18020.1 | 58.781 | 279 | 102 | 4 | 8 | 285 | 1 | 267 | 4.44e-119 | 346 |
| Msa1371580 | AT1G17990.2 | 56.272 | 279 | 101 | 5 | 8 | 285 | 1 | 259 | 1.49e-110 | 324 |
Find 109 sgRNAs with CRISPR-Local
Find 268 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTAGATAGTACTAGTTATTT+TGG | 0.113729 | tig0019233:-173423 | None:intergenic |
| GTCCAAATGCCAGGCGTATT+TGG | 0.175163 | tig0019233:-172421 | None:intergenic |
| ATACACACACGTACCATATT+TGG | 0.213055 | tig0019233:-172539 | None:intergenic |
| CCTTTGAACACCTTCCTAAT+AGG | 0.291774 | tig0019233:-173187 | None:intergenic |
| AATGGTCCTTGATGCCTATT+AGG | 0.301603 | tig0019233:+173173 | Msa1371580:CDS |
| GCTGCTGATCTAGTGGCTTA+TGG | 0.307172 | tig0019233:+173271 | Msa1371580:CDS |
| GGCTGAATCATTGAATCAAT+TGG | 0.309770 | tig0019233:+173084 | Msa1371580:CDS |
| AAAGGGACATTTATTGTTGC+TGG | 0.324243 | tig0019233:+173205 | Msa1371580:CDS |
| GACAGGATCATGCGTATAAA+AGG | 0.327954 | tig0019233:-173374 | None:intergenic |
| GGATTTCATTTGTGCTTAAT+CGG | 0.331257 | tig0019233:-172766 | None:intergenic |
| ACTAAGGGTGGCTTCTTGAT+TGG | 0.336328 | tig0019233:+172048 | Msa1371580:CDS |
| GGCTTGTTTGTGCATGATAT+TGG | 0.338072 | tig0019233:-172686 | None:intergenic |
| GTGCGCCAAGTTCATGAAAA+AGG | 0.339105 | tig0019233:+172475 | Msa1371580:CDS |
| CTAAGGGTGGCTTCTTGATT+GGG | 0.342918 | tig0019233:+172049 | Msa1371580:CDS |
| TCCAAATGCCAGGCGTATTT+GGG | 0.350536 | tig0019233:-172420 | None:intergenic |
| TATGACCTTGATCGCGTTAA+CGG | 0.364577 | tig0019233:-171976 | None:intergenic |
| TTAAAGTTTCCCATCTTGTA+TGG | 0.364982 | tig0019233:-171816 | None:intergenic |
| GTGAAGTAAGTAGAGATAGA+AGG | 0.373385 | tig0019233:+171739 | Msa1371580:five_prime_UTR |
| GACTCTGATCCTCAAGTATT+GGG | 0.377448 | tig0019233:+173052 | Msa1371580:CDS |
| CCATCTTGTATGGGGTGAGC+AGG | 0.381597 | tig0019233:-171806 | None:intergenic |
| ACCCAAATACGCCTGGCATT+TGG | 0.384553 | tig0019233:+172419 | Msa1371580:CDS |
| TTGTTGCTGGAGGTTATGAT+AGG | 0.394121 | tig0019233:+173218 | Msa1371580:CDS |
| ATTAGCTGCAGCAGGATCAT+TGG | 0.397402 | tig0019233:-172726 | None:intergenic |
| TTAAATTGTGTAACCATCCT+TGG | 0.400376 | tig0019233:-173133 | None:intergenic |
| TCATGAACTTGGCGCACAAT+TGG | 0.406981 | tig0019233:-172469 | None:intergenic |
| ACCATATTTGGATACTCTTC+CGG | 0.408173 | tig0019233:-172527 | None:intergenic |
| GATATTGGAGGTTTACCTTC+AGG | 0.416474 | tig0019233:-172671 | None:intergenic |
| TAATAGACTATATATTGATT+AGG | 0.423221 | tig0019233:+173505 | Msa1371580:three_prime_UTR |
| TTCTTGATTGGGGAAGCATC+TGG | 0.424746 | tig0019233:+172060 | Msa1371580:CDS |
| GTATAAAAGGTAGTTGGATC+AGG | 0.427027 | tig0019233:-173361 | None:intergenic |
| CTTGCTTGATCAATTTCTAA+AGG | 0.427817 | tig0019233:+172877 | Msa1371580:CDS |
| AACGACAGAGATGACGAGTA+TGG | 0.432506 | tig0019233:+172908 | Msa1371580:CDS |
| GCCGGAAGAGTATCCAAATA+TGG | 0.433682 | tig0019233:+172526 | Msa1371580:CDS |
| TATACGCATGATCCTGTCCT+TGG | 0.445992 | tig0019233:+173379 | Msa1371580:CDS |
| AATAGGCATCAAGGACCATT+TGG | 0.455116 | tig0019233:-173170 | None:intergenic |
| TGGCATTTGGACAAGGGAAC+AGG | 0.464254 | tig0019233:+172432 | Msa1371580:CDS |
| CATCTTGTATGGGGTGAGCA+GGG | 0.471532 | tig0019233:-171805 | None:intergenic |
| TTATTCTCAAAGATCAACTA+AGG | 0.473661 | tig0019233:+172032 | Msa1371580:CDS |
| GCTGAATCATTGAATCAATT+GGG | 0.474970 | tig0019233:+173085 | Msa1371580:CDS |
| AGAGATAGAAGGATGACTAA+AGG | 0.476048 | tig0019233:+171750 | Msa1371580:exon |
| GCAAGAAATGCCATGGAAGC+AGG | 0.479264 | tig0019233:+172818 | Msa1371580:CDS |
| GTAGAGATACATGGAGCTAA+TGG | 0.479754 | tig0019233:+172851 | Msa1371580:CDS |
| GTGCTTAATCGGCGAGGAGG+TGG | 0.494140 | tig0019233:-172755 | None:intergenic |
| TTGGACAAGGGAACAGGTAG+AGG | 0.495054 | tig0019233:+172438 | Msa1371580:CDS |
| TAAAGTTTCCCATCTTGTAT+GGG | 0.501559 | tig0019233:-171815 | None:intergenic |
| TATGATAGGAGTGAAGGAAA+TGG | 0.503378 | tig0019233:+173232 | Msa1371580:CDS |
| AGACTCTGATCCTCAAGTAT+TGG | 0.505390 | tig0019233:+173051 | Msa1371580:CDS |
| TCCATCAAAACCTGCTTCCA+TGG | 0.506298 | tig0019233:-172828 | None:intergenic |
| TCAAGTATTGGGTATTTACA+TGG | 0.517434 | tig0019233:+173063 | Msa1371580:CDS |
| CCTGCTCACCCCATACAAGA+TGG | 0.518048 | tig0019233:+171806 | Msa1371580:CDS |
| TGTTCCCTTGTCCAAATGCC+AGG | 0.522788 | tig0019233:-172430 | None:intergenic |
| GGATATTGATTAGCTGCAGC+AGG | 0.526559 | tig0019233:-172734 | None:intergenic |
| CTTCCCACTTCGAGTGGTGA+AGG | 0.529500 | tig0019233:+172955 | Msa1371580:CDS |
| TTGGAGGTTTACCTTCAGGC+TGG | 0.534090 | tig0019233:-172667 | None:intergenic |
| CCTATTAGGAAGGTGTTCAA+AGG | 0.534129 | tig0019233:+173187 | Msa1371580:CDS |
| TTAATACGACAGGATAGTGT+TGG | 0.537539 | tig0019233:+171951 | Msa1371580:intron |
| CACCTTCCTAATAGGCATCA+AGG | 0.537835 | tig0019233:-173179 | None:intergenic |
| TTGGAGATATCTTTCTGAAG+AGG | 0.538385 | tig0019233:-172707 | None:intergenic |
| TTGTTTGTGCATGATATTGG+AGG | 0.543879 | tig0019233:-172683 | None:intergenic |
| CTATTAGGAAGGTGTTCAAA+GGG | 0.545620 | tig0019233:+173188 | Msa1371580:CDS |
| TCATGCGTATAAAAGGTAGT+TGG | 0.551693 | tig0019233:-173367 | None:intergenic |
| AAAAGGTACCCAAATACGCC+TGG | 0.553805 | tig0019233:+172412 | Msa1371580:intron |
| ATCTTGTATGGGGTGAGCAG+GGG | 0.554437 | tig0019233:-171804 | None:intergenic |
| TTTGATGGAGTAGAGATACA+TGG | 0.555461 | tig0019233:+172842 | Msa1371580:CDS |
| ATACGCCTGGCATTTGGACA+AGG | 0.556441 | tig0019233:+172425 | Msa1371580:CDS |
| TTCTGTCAACTTTGGCACGC+CGG | 0.558422 | tig0019233:+172508 | Msa1371580:CDS |
| ATGTGGTGCTGCTGATCTAG+TGG | 0.559206 | tig0019233:+173264 | Msa1371580:CDS |
| ACAAGTGTGACACCACCAAA+TGG | 0.560123 | tig0019233:+173155 | Msa1371580:CDS |
| TGGCGCCGTTAACGCGATCA+AGG | 0.570814 | tig0019233:+171971 | Msa1371580:CDS |
| GATGACTAAAGGAGAAGTAA+TGG | 0.579090 | tig0019233:+171761 | Msa1371580:exon |
| TAAGGGTGGCTTCTTGATTG+GGG | 0.580264 | tig0019233:+172050 | Msa1371580:CDS |
| GTCCTTGATGCCTATTAGGA+AGG | 0.582773 | tig0019233:+173177 | Msa1371580:CDS |
| ATGGATAATCACTATATCCA+AGG | 0.584629 | tig0019233:-173396 | None:intergenic |
| TAATCACTATATCCAAGGAC+AGG | 0.584850 | tig0019233:-173391 | None:intergenic |
| CTGCTCACCCCATACAAGAT+GGG | 0.585227 | tig0019233:+171807 | Msa1371580:CDS |
| AAAGTTTCCCATCTTGTATG+GGG | 0.586684 | tig0019233:-171814 | None:intergenic |
| GAAACTTTAATCTATCTCAC+AGG | 0.587121 | tig0019233:+171829 | Msa1371580:CDS |
| AATTGCTGCAAGAAATGCCA+TGG | 0.589036 | tig0019233:+172811 | Msa1371580:CDS |
| AAAGGAGAAGTAATGGTCGA+TGG | 0.589838 | tig0019233:+171768 | Msa1371580:CDS |
| GGAGGTTATGATAGGAGTGA+AGG | 0.591271 | tig0019233:+173226 | Msa1371580:CDS |
| TCTCAAAGATCAACTAAGGG+TGG | 0.594762 | tig0019233:+172036 | Msa1371580:CDS |
| TTGTCGCTTCCCACTTCGAG+TGG | 0.596275 | tig0019233:+172949 | Msa1371580:CDS |
| ACTGCCTTCACCACTCGAAG+TGG | 0.598555 | tig0019233:-172959 | None:intergenic |
| TGAAGTCATTGACAAGCATG+TGG | 0.600270 | tig0019233:-172787 | None:intergenic |
| GGGACATTTATTGTTGCTGG+AGG | 0.600926 | tig0019233:+173208 | Msa1371580:CDS |
| AAGGCAGTAGCTGATGAGAT+CGG | 0.601265 | tig0019233:+172974 | Msa1371580:CDS |
| AGGCATCAAGGACCATTTGG+TGG | 0.602094 | tig0019233:-173167 | None:intergenic |
| TGATGAGATCGGAGCTGACA+AGG | 0.615859 | tig0019233:+172985 | Msa1371580:CDS |
| TATAAAAGGTAGTTGGATCA+GGG | 0.616334 | tig0019233:-173360 | None:intergenic |
| CAAGGGAACAGGTAGAGGCA+TGG | 0.618836 | tig0019233:+172443 | Msa1371580:CDS |
| TCATATGATTGAGCCAAGGA+TGG | 0.619695 | tig0019233:+173120 | Msa1371580:CDS |
| GGTGTGTCTAACACAGCACA+AGG | 0.629575 | tig0019233:+172081 | Msa1371580:CDS |
| TACGCCTGGCATTTGGACAA+GGG | 0.635846 | tig0019233:+172426 | Msa1371580:CDS |
| ATGTAAATACCCAATACTTG+AGG | 0.640485 | tig0019233:-173061 | None:intergenic |
| TTTGTGCTTAATCGGCGAGG+AGG | 0.648362 | tig0019233:-172758 | None:intergenic |
| TATTCTCAAAGATCAACTAA+GGG | 0.648427 | tig0019233:+172033 | Msa1371580:CDS |
| GATGTAGTATACCAGCCTGA+AGG | 0.656347 | tig0019233:+172656 | Msa1371580:intron |
| AAAAGGTAGTTGGATCAGGG+TGG | 0.658195 | tig0019233:-173357 | None:intergenic |
| CTGCCTTCACCACTCGAAGT+GGG | 0.659608 | tig0019233:-172958 | None:intergenic |
| GAGATCGGAGCTGACAAGGT+TGG | 0.665946 | tig0019233:+172989 | Msa1371580:CDS |
| TCATTTGTGCTTAATCGGCG+AGG | 0.670046 | tig0019233:-172761 | None:intergenic |
| CAATCATTATAATCAGCGAA+AGG | 0.671533 | tig0019233:-173025 | None:intergenic |
| GAATAATATGAAACAGCATG+AGG | 0.679009 | tig0019233:-172015 | None:intergenic |
| GACAGAGATGACGAGTATGG+AGG | 0.692429 | tig0019233:+172911 | Msa1371580:CDS |
| TAAAAGATTTGAACTCAACG+TGG | 0.709690 | tig0019233:+173324 | Msa1371580:CDS |
| GAGCTGACAAGGTTGGTGTG+AGG | 0.727383 | tig0019233:+172996 | Msa1371580:CDS |
| ACTGTCATATGATTGAGCCA+AGG | 0.734502 | tig0019233:+173116 | Msa1371580:CDS |
| GGAAATGGTGCTATAGCATG+TGG | 0.744862 | tig0019233:+173247 | Msa1371580:CDS |
| GTGTGTCTAACACAGCACAA+GGG | 0.755183 | tig0019233:+172082 | Msa1371580:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAATGATTAATAAAATTAC+CGG | - | tig0019233:172172-172191 | None:intergenic | 10.0% |
| !! | TAATAATATACACATATAAT+TGG | + | tig0019233:172634-172653 | Msa1371580:intron | 10.0% |
| !! | ATAATGATTAATAAAATTAC+CGG | - | tig0019233:172172-172191 | None:intergenic | 10.0% |
| !! | TAATAATATACACATATAAT+TGG | + | tig0019233:172634-172653 | Msa1371580:intron | 10.0% |
| !!! | TTAATTTAATTTAATACGAC+AGG | + | tig0019233:171941-171960 | Msa1371580:intron | 15.0% |
| !! | AATTTATAAATTAATTCGAC+CGG | + | tig0019233:172150-172169 | Msa1371580:intron | 15.0% |
| !!! | TAATAGACTATATATTGATT+AGG | + | tig0019233:173505-173524 | Msa1371580:three_prime_UTR | 15.0% |
| !!! | TTAATTTAATTTAATACGAC+AGG | + | tig0019233:171941-171960 | Msa1371580:intron | 15.0% |
| !! | AATTTATAAATTAATTCGAC+CGG | + | tig0019233:172150-172169 | Msa1371580:intron | 15.0% |
| !!! | TAATAGACTATATATTGATT+AGG | + | tig0019233:173505-173524 | Msa1371580:three_prime_UTR | 15.0% |
| !! | TTGATGAGTGAAAAAATTAA+TGG | + | tig0019233:172303-172322 | Msa1371580:intron | 20.0% |
| !! | TGAAATAAAATCCTTGTAAT+GGG | - | tig0019233:172571-172590 | None:intergenic | 20.0% |
| !! | ATGAAATAAAATCCTTGTAA+TGG | - | tig0019233:172572-172591 | None:intergenic | 20.0% |
| !! | TTGATGAGTGAAAAAATTAA+TGG | + | tig0019233:172303-172322 | Msa1371580:intron | 20.0% |
| !! | TGAAATAAAATCCTTGTAAT+GGG | - | tig0019233:172571-172590 | None:intergenic | 20.0% |
| !! | ATGAAATAAAATCCTTGTAA+TGG | - | tig0019233:172572-172591 | None:intergenic | 20.0% |
| !!! | GTGTGTGTTTTTTTTCTTTT+TGG | + | tig0019233:171893-171912 | Msa1371580:intron | 25.0% |
| ! | TTATTCTCAAAGATCAACTA+AGG | + | tig0019233:172032-172051 | Msa1371580:CDS | 25.0% |
| ! | TATTCTCAAAGATCAACTAA+GGG | + | tig0019233:172033-172052 | Msa1371580:CDS | 25.0% |
| ! | AAACAACGCCAAAATTAATT+GGG | + | tig0019233:172268-172287 | Msa1371580:intron | 25.0% |
| !!! | ATTTTTTCACTCATCAACAA+TGG | - | tig0019233:172300-172319 | None:intergenic | 25.0% |
| !! | AAAATTAATGGAGCAGATTT+TGG | + | tig0019233:172315-172334 | Msa1371580:intron | 25.0% |
| ! | AACATGGATGATCAAATAAA+AGG | + | tig0019233:172395-172414 | Msa1371580:intron | 25.0% |
| ! | TGTATATTTATCCCATTACA+AGG | + | tig0019233:172557-172576 | Msa1371580:intron | 25.0% |
| !!! | TACTAGTTATTTTGGAGAAA+TGG | - | tig0019233:173418-173437 | None:intergenic | 25.0% |
| !! | CTAGATAGTACTAGTTATTT+TGG | - | tig0019233:173426-173445 | None:intergenic | 25.0% |
| !!! | GTGTGTGTTTTTTTTCTTTT+TGG | + | tig0019233:171893-171912 | Msa1371580:intron | 25.0% |
| ! | TTATTCTCAAAGATCAACTA+AGG | + | tig0019233:172032-172051 | Msa1371580:CDS | 25.0% |
| ! | TATTCTCAAAGATCAACTAA+GGG | + | tig0019233:172033-172052 | Msa1371580:CDS | 25.0% |
| ! | AAACAACGCCAAAATTAATT+GGG | + | tig0019233:172268-172287 | Msa1371580:intron | 25.0% |
| !!! | ATTTTTTCACTCATCAACAA+TGG | - | tig0019233:172300-172319 | None:intergenic | 25.0% |
| !! | AAAATTAATGGAGCAGATTT+TGG | + | tig0019233:172315-172334 | Msa1371580:intron | 25.0% |
| ! | AACATGGATGATCAAATAAA+AGG | + | tig0019233:172395-172414 | Msa1371580:intron | 25.0% |
| ! | TGTATATTTATCCCATTACA+AGG | + | tig0019233:172557-172576 | Msa1371580:intron | 25.0% |
| !!! | TACTAGTTATTTTGGAGAAA+TGG | - | tig0019233:173418-173437 | None:intergenic | 25.0% |
| !! | CTAGATAGTACTAGTTATTT+TGG | - | tig0019233:173426-173445 | None:intergenic | 25.0% |
| TAAAGTTTCCCATCTTGTAT+GGG | - | tig0019233:171818-171837 | None:intergenic | 30.0% | |
| TTAAAGTTTCCCATCTTGTA+TGG | - | tig0019233:171819-171838 | None:intergenic | 30.0% | |
| GAAACTTTAATCTATCTCAC+AGG | + | tig0019233:171829-171848 | Msa1371580:CDS | 30.0% | |
| GAATAATATGAAACAGCATG+AGG | - | tig0019233:172018-172037 | None:intergenic | 30.0% | |
| !! | CAATTAATTTTGGCGTTGTT+TGG | - | tig0019233:172269-172288 | None:intergenic | 30.0% |
| CAAACAACGCCAAAATTAAT+TGG | + | tig0019233:172267-172286 | Msa1371580:intron | 30.0% | |
| ! | GGAATTTGCCCAATTAATTT+TGG | - | tig0019233:172279-172298 | None:intergenic | 30.0% |
| !!! | ACGAGAATGCTTTTTTAACA+TGG | + | tig0019233:172379-172398 | Msa1371580:intron | 30.0% |
| CCAAAGTTGACAGAAAAATA+TGG | - | tig0019233:172503-172522 | None:intergenic | 30.0% | |
| ! | CCATATTTTTCTGTCAACTT+TGG | + | tig0019233:172500-172519 | Msa1371580:CDS | 30.0% |
| GGATTTCATTTGTGCTTAAT+CGG | - | tig0019233:172769-172788 | None:intergenic | 30.0% | |
| CTTGCTTGATCAATTTCTAA+AGG | + | tig0019233:172877-172896 | Msa1371580:CDS | 30.0% | |
| CAATCATTATAATCAGCGAA+AGG | - | tig0019233:173028-173047 | None:intergenic | 30.0% | |
| ATGTAAATACCCAATACTTG+AGG | - | tig0019233:173064-173083 | None:intergenic | 30.0% | |
| !! | TCAAGTATTGGGTATTTACA+TGG | + | tig0019233:173063-173082 | Msa1371580:CDS | 30.0% |
| GCTGAATCATTGAATCAATT+GGG | + | tig0019233:173085-173104 | Msa1371580:CDS | 30.0% | |
| TTAAATTGTGTAACCATCCT+TGG | - | tig0019233:173136-173155 | None:intergenic | 30.0% | |
| !! | TCAAATCTTTTAGGAAGATC+TGG | - | tig0019233:173316-173335 | None:intergenic | 30.0% |
| ! | ACGTTGAGTTCAAATCTTTT+AGG | - | tig0019233:173325-173344 | None:intergenic | 30.0% |
| TAAAAGATTTGAACTCAACG+TGG | + | tig0019233:173324-173343 | Msa1371580:CDS | 30.0% | |
| TATAAAAGGTAGTTGGATCA+GGG | - | tig0019233:173363-173382 | None:intergenic | 30.0% | |
| ATGGATAATCACTATATCCA+AGG | - | tig0019233:173399-173418 | None:intergenic | 30.0% | |
| TAAAGTTTCCCATCTTGTAT+GGG | - | tig0019233:171818-171837 | None:intergenic | 30.0% | |
| TTAAAGTTTCCCATCTTGTA+TGG | - | tig0019233:171819-171838 | None:intergenic | 30.0% | |
| GAAACTTTAATCTATCTCAC+AGG | + | tig0019233:171829-171848 | Msa1371580:CDS | 30.0% | |
| GAATAATATGAAACAGCATG+AGG | - | tig0019233:172018-172037 | None:intergenic | 30.0% | |
| !! | CAATTAATTTTGGCGTTGTT+TGG | - | tig0019233:172269-172288 | None:intergenic | 30.0% |
| CAAACAACGCCAAAATTAAT+TGG | + | tig0019233:172267-172286 | Msa1371580:intron | 30.0% | |
| ! | GGAATTTGCCCAATTAATTT+TGG | - | tig0019233:172279-172298 | None:intergenic | 30.0% |
| !!! | ACGAGAATGCTTTTTTAACA+TGG | + | tig0019233:172379-172398 | Msa1371580:intron | 30.0% |
| CCAAAGTTGACAGAAAAATA+TGG | - | tig0019233:172503-172522 | None:intergenic | 30.0% | |
| ! | CCATATTTTTCTGTCAACTT+TGG | + | tig0019233:172500-172519 | Msa1371580:CDS | 30.0% |
| GGATTTCATTTGTGCTTAAT+CGG | - | tig0019233:172769-172788 | None:intergenic | 30.0% | |
| CTTGCTTGATCAATTTCTAA+AGG | + | tig0019233:172877-172896 | Msa1371580:CDS | 30.0% | |
| CAATCATTATAATCAGCGAA+AGG | - | tig0019233:173028-173047 | None:intergenic | 30.0% | |
| ATGTAAATACCCAATACTTG+AGG | - | tig0019233:173064-173083 | None:intergenic | 30.0% | |
| !! | TCAAGTATTGGGTATTTACA+TGG | + | tig0019233:173063-173082 | Msa1371580:CDS | 30.0% |
| GCTGAATCATTGAATCAATT+GGG | + | tig0019233:173085-173104 | Msa1371580:CDS | 30.0% | |
| TTAAATTGTGTAACCATCCT+TGG | - | tig0019233:173136-173155 | None:intergenic | 30.0% | |
| !! | TCAAATCTTTTAGGAAGATC+TGG | - | tig0019233:173316-173335 | None:intergenic | 30.0% |
| ! | ACGTTGAGTTCAAATCTTTT+AGG | - | tig0019233:173325-173344 | None:intergenic | 30.0% |
| TAAAAGATTTGAACTCAACG+TGG | + | tig0019233:173324-173343 | Msa1371580:CDS | 30.0% | |
| TATAAAAGGTAGTTGGATCA+GGG | - | tig0019233:173363-173382 | None:intergenic | 30.0% | |
| ATGGATAATCACTATATCCA+AGG | - | tig0019233:173399-173418 | None:intergenic | 30.0% | |
| GTGAAGTAAGTAGAGATAGA+AGG | + | tig0019233:171739-171758 | Msa1371580:five_prime_UTR | 35.0% | |
| AGAGATAGAAGGATGACTAA+AGG | + | tig0019233:171750-171769 | Msa1371580:exon | 35.0% | |
| GATGACTAAAGGAGAAGTAA+TGG | + | tig0019233:171761-171780 | Msa1371580:exon | 35.0% | |
| AAAGTTTCCCATCTTGTATG+GGG | - | tig0019233:171817-171836 | None:intergenic | 35.0% | |
| TTAATACGACAGGATAGTGT+TGG | + | tig0019233:171951-171970 | Msa1371580:intron | 35.0% | |
| ACCATATTTGGATACTCTTC+CGG | - | tig0019233:172530-172549 | None:intergenic | 35.0% | |
| ATACACACACGTACCATATT+TGG | - | tig0019233:172542-172561 | None:intergenic | 35.0% | |
| TTGTTTGTGCATGATATTGG+AGG | - | tig0019233:172686-172705 | None:intergenic | 35.0% | |
| ! | TTGGAGATATCTTTCTGAAG+AGG | - | tig0019233:172710-172729 | None:intergenic | 35.0% |
| TTTGATGGAGTAGAGATACA+TGG | + | tig0019233:172842-172861 | Msa1371580:CDS | 35.0% | |
| GGCTGAATCATTGAATCAAT+TGG | + | tig0019233:173084-173103 | Msa1371580:CDS | 35.0% | |
| !! | CTATTAGGAAGGTGTTCAAA+GGG | + | tig0019233:173188-173207 | Msa1371580:CDS | 35.0% |
| AAAGGGACATTTATTGTTGC+TGG | + | tig0019233:173205-173224 | Msa1371580:CDS | 35.0% | |
| TATGATAGGAGTGAAGGAAA+TGG | + | tig0019233:173232-173251 | Msa1371580:CDS | 35.0% | |
| GTATAAAAGGTAGTTGGATC+AGG | - | tig0019233:173364-173383 | None:intergenic | 35.0% | |
| TCATGCGTATAAAAGGTAGT+TGG | - | tig0019233:173370-173389 | None:intergenic | 35.0% | |
| TAATCACTATATCCAAGGAC+AGG | - | tig0019233:173394-173413 | None:intergenic | 35.0% | |
| GTGAAGTAAGTAGAGATAGA+AGG | + | tig0019233:171739-171758 | Msa1371580:five_prime_UTR | 35.0% | |
| AGAGATAGAAGGATGACTAA+AGG | + | tig0019233:171750-171769 | Msa1371580:exon | 35.0% | |
| GATGACTAAAGGAGAAGTAA+TGG | + | tig0019233:171761-171780 | Msa1371580:exon | 35.0% | |
| AAAGTTTCCCATCTTGTATG+GGG | - | tig0019233:171817-171836 | None:intergenic | 35.0% | |
| TTAATACGACAGGATAGTGT+TGG | + | tig0019233:171951-171970 | Msa1371580:intron | 35.0% | |
| ACCATATTTGGATACTCTTC+CGG | - | tig0019233:172530-172549 | None:intergenic | 35.0% | |
| ATACACACACGTACCATATT+TGG | - | tig0019233:172542-172561 | None:intergenic | 35.0% | |
| TTGTTTGTGCATGATATTGG+AGG | - | tig0019233:172686-172705 | None:intergenic | 35.0% | |
| ! | TTGGAGATATCTTTCTGAAG+AGG | - | tig0019233:172710-172729 | None:intergenic | 35.0% |
| TTTGATGGAGTAGAGATACA+TGG | + | tig0019233:172842-172861 | Msa1371580:CDS | 35.0% | |
| GGCTGAATCATTGAATCAAT+TGG | + | tig0019233:173084-173103 | Msa1371580:CDS | 35.0% | |
| !! | CTATTAGGAAGGTGTTCAAA+GGG | + | tig0019233:173188-173207 | Msa1371580:CDS | 35.0% |
| AAAGGGACATTTATTGTTGC+TGG | + | tig0019233:173205-173224 | Msa1371580:CDS | 35.0% | |
| TATGATAGGAGTGAAGGAAA+TGG | + | tig0019233:173232-173251 | Msa1371580:CDS | 35.0% | |
| GTATAAAAGGTAGTTGGATC+AGG | - | tig0019233:173364-173383 | None:intergenic | 35.0% | |
| TCATGCGTATAAAAGGTAGT+TGG | - | tig0019233:173370-173389 | None:intergenic | 35.0% | |
| TAATCACTATATCCAAGGAC+AGG | - | tig0019233:173394-173413 | None:intergenic | 35.0% | |
| AAAGGAGAAGTAATGGTCGA+TGG | + | tig0019233:171768-171787 | Msa1371580:CDS | 40.0% | |
| TATGACCTTGATCGCGTTAA+CGG | - | tig0019233:171979-171998 | None:intergenic | 40.0% | |
| TCTCAAAGATCAACTAAGGG+TGG | + | tig0019233:172036-172055 | Msa1371580:CDS | 40.0% | |
| !! | TGGCTCCTTTTTCATGAACT+TGG | - | tig0019233:172483-172502 | None:intergenic | 40.0% |
| GATATTGGAGGTTTACCTTC+AGG | - | tig0019233:172674-172693 | None:intergenic | 40.0% | |
| ! | GGCTTGTTTGTGCATGATAT+TGG | - | tig0019233:172689-172708 | None:intergenic | 40.0% |
| TGAAGTCATTGACAAGCATG+TGG | - | tig0019233:172790-172809 | None:intergenic | 40.0% | |
| AATTGCTGCAAGAAATGCCA+TGG | + | tig0019233:172811-172830 | Msa1371580:CDS | 40.0% | |
| GTAGAGATACATGGAGCTAA+TGG | + | tig0019233:172851-172870 | Msa1371580:CDS | 40.0% | |
| AGACTCTGATCCTCAAGTAT+TGG | + | tig0019233:173051-173070 | Msa1371580:CDS | 40.0% | |
| GACTCTGATCCTCAAGTATT+GGG | + | tig0019233:173052-173071 | Msa1371580:CDS | 40.0% | |
| ACTGTCATATGATTGAGCCA+AGG | + | tig0019233:173116-173135 | Msa1371580:CDS | 40.0% | |
| TCATATGATTGAGCCAAGGA+TGG | + | tig0019233:173120-173139 | Msa1371580:CDS | 40.0% | |
| AATAGGCATCAAGGACCATT+TGG | - | tig0019233:173173-173192 | None:intergenic | 40.0% | |
| AATGGTCCTTGATGCCTATT+AGG | + | tig0019233:173173-173192 | Msa1371580:CDS | 40.0% | |
| CCTTTGAACACCTTCCTAAT+AGG | - | tig0019233:173190-173209 | None:intergenic | 40.0% | |
| !! | CCTATTAGGAAGGTGTTCAA+AGG | + | tig0019233:173187-173206 | Msa1371580:CDS | 40.0% |
| TTGTTGCTGGAGGTTATGAT+AGG | + | tig0019233:173218-173237 | Msa1371580:CDS | 40.0% | |
| GACAGGATCATGCGTATAAA+AGG | - | tig0019233:173377-173396 | None:intergenic | 40.0% | |
| AAAGGAGAAGTAATGGTCGA+TGG | + | tig0019233:171768-171787 | Msa1371580:CDS | 40.0% | |
| TATGACCTTGATCGCGTTAA+CGG | - | tig0019233:171979-171998 | None:intergenic | 40.0% | |
| TCTCAAAGATCAACTAAGGG+TGG | + | tig0019233:172036-172055 | Msa1371580:CDS | 40.0% | |
| !! | TGGCTCCTTTTTCATGAACT+TGG | - | tig0019233:172483-172502 | None:intergenic | 40.0% |
| GATATTGGAGGTTTACCTTC+AGG | - | tig0019233:172674-172693 | None:intergenic | 40.0% | |
| ! | GGCTTGTTTGTGCATGATAT+TGG | - | tig0019233:172689-172708 | None:intergenic | 40.0% |
| TGAAGTCATTGACAAGCATG+TGG | - | tig0019233:172790-172809 | None:intergenic | 40.0% | |
| AATTGCTGCAAGAAATGCCA+TGG | + | tig0019233:172811-172830 | Msa1371580:CDS | 40.0% | |
| GTAGAGATACATGGAGCTAA+TGG | + | tig0019233:172851-172870 | Msa1371580:CDS | 40.0% | |
| AGACTCTGATCCTCAAGTAT+TGG | + | tig0019233:173051-173070 | Msa1371580:CDS | 40.0% | |
| GACTCTGATCCTCAAGTATT+GGG | + | tig0019233:173052-173071 | Msa1371580:CDS | 40.0% | |
| ACTGTCATATGATTGAGCCA+AGG | + | tig0019233:173116-173135 | Msa1371580:CDS | 40.0% | |
| TCATATGATTGAGCCAAGGA+TGG | + | tig0019233:173120-173139 | Msa1371580:CDS | 40.0% | |
| AATAGGCATCAAGGACCATT+TGG | - | tig0019233:173173-173192 | None:intergenic | 40.0% | |
| AATGGTCCTTGATGCCTATT+AGG | + | tig0019233:173173-173192 | Msa1371580:CDS | 40.0% | |
| CCTTTGAACACCTTCCTAAT+AGG | - | tig0019233:173190-173209 | None:intergenic | 40.0% | |
| !! | CCTATTAGGAAGGTGTTCAA+AGG | + | tig0019233:173187-173206 | Msa1371580:CDS | 40.0% |
| TTGTTGCTGGAGGTTATGAT+AGG | + | tig0019233:173218-173237 | Msa1371580:CDS | 40.0% | |
| GACAGGATCATGCGTATAAA+AGG | - | tig0019233:173377-173396 | None:intergenic | 40.0% | |
| ACTAAGGGTGGCTTCTTGAT+TGG | + | tig0019233:172048-172067 | Msa1371580:CDS | 45.0% | |
| CTAAGGGTGGCTTCTTGATT+GGG | + | tig0019233:172049-172068 | Msa1371580:CDS | 45.0% | |
| TAAGGGTGGCTTCTTGATTG+GGG | + | tig0019233:172050-172069 | Msa1371580:CDS | 45.0% | |
| !! | TTCTTGATTGGGGAAGCATC+TGG | + | tig0019233:172060-172079 | Msa1371580:CDS | 45.0% |
| GTGTGTCTAACACAGCACAA+GGG | + | tig0019233:172082-172101 | Msa1371580:CDS | 45.0% | |
| !! | AAAAGGTACCCAAATACGCC+TGG | + | tig0019233:172412-172431 | Msa1371580:intron | 45.0% |
| TCCAAATGCCAGGCGTATTT+GGG | - | tig0019233:172423-172442 | None:intergenic | 45.0% | |
| TCATGAACTTGGCGCACAAT+TGG | - | tig0019233:172472-172491 | None:intergenic | 45.0% | |
| GTGCGCCAAGTTCATGAAAA+AGG | + | tig0019233:172475-172494 | Msa1371580:CDS | 45.0% | |
| !! | GCCGGAAGAGTATCCAAATA+TGG | + | tig0019233:172526-172545 | Msa1371580:CDS | 45.0% |
| GATGTAGTATACCAGCCTGA+AGG | + | tig0019233:172656-172675 | Msa1371580:intron | 45.0% | |
| ATTAGCTGCAGCAGGATCAT+TGG | - | tig0019233:172729-172748 | None:intergenic | 45.0% | |
| ! | GGATATTGATTAGCTGCAGC+AGG | - | tig0019233:172737-172756 | None:intergenic | 45.0% |
| TCATTTGTGCTTAATCGGCG+AGG | - | tig0019233:172764-172783 | None:intergenic | 45.0% | |
| TCCATCAAAACCTGCTTCCA+TGG | - | tig0019233:172831-172850 | None:intergenic | 45.0% | |
| AACGACAGAGATGACGAGTA+TGG | + | tig0019233:172908-172927 | Msa1371580:CDS | 45.0% | |
| AAGGCAGTAGCTGATGAGAT+CGG | + | tig0019233:172974-172993 | Msa1371580:CDS | 45.0% | |
| ACAAGTGTGACACCACCAAA+TGG | + | tig0019233:173155-173174 | Msa1371580:CDS | 45.0% | |
| GTCCTTGATGCCTATTAGGA+AGG | + | tig0019233:173177-173196 | Msa1371580:CDS | 45.0% | |
| CACCTTCCTAATAGGCATCA+AGG | - | tig0019233:173182-173201 | None:intergenic | 45.0% | |
| GGGACATTTATTGTTGCTGG+AGG | + | tig0019233:173208-173227 | Msa1371580:CDS | 45.0% | |
| GGAGGTTATGATAGGAGTGA+AGG | + | tig0019233:173226-173245 | Msa1371580:CDS | 45.0% | |
| !! | GGAAATGGTGCTATAGCATG+TGG | + | tig0019233:173247-173266 | Msa1371580:CDS | 45.0% |
| ! | GGCTTATGGACGTCTCTTTT+TGG | + | tig0019233:173285-173304 | Msa1371580:CDS | 45.0% |
| AAAAGGTAGTTGGATCAGGG+TGG | - | tig0019233:173360-173379 | None:intergenic | 45.0% | |
| TATACGCATGATCCTGTCCT+TGG | + | tig0019233:173379-173398 | Msa1371580:CDS | 45.0% | |
| ACTAAGGGTGGCTTCTTGAT+TGG | + | tig0019233:172048-172067 | Msa1371580:CDS | 45.0% | |
| CTAAGGGTGGCTTCTTGATT+GGG | + | tig0019233:172049-172068 | Msa1371580:CDS | 45.0% | |
| TAAGGGTGGCTTCTTGATTG+GGG | + | tig0019233:172050-172069 | Msa1371580:CDS | 45.0% | |
| !! | TTCTTGATTGGGGAAGCATC+TGG | + | tig0019233:172060-172079 | Msa1371580:CDS | 45.0% |
| GTGTGTCTAACACAGCACAA+GGG | + | tig0019233:172082-172101 | Msa1371580:CDS | 45.0% | |
| !! | AAAAGGTACCCAAATACGCC+TGG | + | tig0019233:172412-172431 | Msa1371580:intron | 45.0% |
| TCCAAATGCCAGGCGTATTT+GGG | - | tig0019233:172423-172442 | None:intergenic | 45.0% | |
| TCATGAACTTGGCGCACAAT+TGG | - | tig0019233:172472-172491 | None:intergenic | 45.0% | |
| GTGCGCCAAGTTCATGAAAA+AGG | + | tig0019233:172475-172494 | Msa1371580:CDS | 45.0% | |
| !! | GCCGGAAGAGTATCCAAATA+TGG | + | tig0019233:172526-172545 | Msa1371580:CDS | 45.0% |
| GATGTAGTATACCAGCCTGA+AGG | + | tig0019233:172656-172675 | Msa1371580:intron | 45.0% | |
| ATTAGCTGCAGCAGGATCAT+TGG | - | tig0019233:172729-172748 | None:intergenic | 45.0% | |
| ! | GGATATTGATTAGCTGCAGC+AGG | - | tig0019233:172737-172756 | None:intergenic | 45.0% |
| TCATTTGTGCTTAATCGGCG+AGG | - | tig0019233:172764-172783 | None:intergenic | 45.0% | |
| TCCATCAAAACCTGCTTCCA+TGG | - | tig0019233:172831-172850 | None:intergenic | 45.0% | |
| AACGACAGAGATGACGAGTA+TGG | + | tig0019233:172908-172927 | Msa1371580:CDS | 45.0% | |
| AAGGCAGTAGCTGATGAGAT+CGG | + | tig0019233:172974-172993 | Msa1371580:CDS | 45.0% | |
| ACAAGTGTGACACCACCAAA+TGG | + | tig0019233:173155-173174 | Msa1371580:CDS | 45.0% | |
| GTCCTTGATGCCTATTAGGA+AGG | + | tig0019233:173177-173196 | Msa1371580:CDS | 45.0% | |
| CACCTTCCTAATAGGCATCA+AGG | - | tig0019233:173182-173201 | None:intergenic | 45.0% | |
| GGGACATTTATTGTTGCTGG+AGG | + | tig0019233:173208-173227 | Msa1371580:CDS | 45.0% | |
| GGAGGTTATGATAGGAGTGA+AGG | + | tig0019233:173226-173245 | Msa1371580:CDS | 45.0% | |
| !! | GGAAATGGTGCTATAGCATG+TGG | + | tig0019233:173247-173266 | Msa1371580:CDS | 45.0% |
| ! | GGCTTATGGACGTCTCTTTT+TGG | + | tig0019233:173285-173304 | Msa1371580:CDS | 45.0% |
| AAAAGGTAGTTGGATCAGGG+TGG | - | tig0019233:173360-173379 | None:intergenic | 45.0% | |
| TATACGCATGATCCTGTCCT+TGG | + | tig0019233:173379-173398 | Msa1371580:CDS | 45.0% | |
| ATCTTGTATGGGGTGAGCAG+GGG | - | tig0019233:171807-171826 | None:intergenic | 50.0% | |
| CATCTTGTATGGGGTGAGCA+GGG | - | tig0019233:171808-171827 | None:intergenic | 50.0% | |
| CTGCTCACCCCATACAAGAT+GGG | + | tig0019233:171807-171826 | Msa1371580:CDS | 50.0% | |
| GGTGTGTCTAACACAGCACA+AGG | + | tig0019233:172081-172100 | Msa1371580:CDS | 50.0% | |
| ACCCAAATACGCCTGGCATT+TGG | + | tig0019233:172419-172438 | Msa1371580:CDS | 50.0% | |
| GTCCAAATGCCAGGCGTATT+TGG | - | tig0019233:172424-172443 | None:intergenic | 50.0% | |
| ATACGCCTGGCATTTGGACA+AGG | + | tig0019233:172425-172444 | Msa1371580:CDS | 50.0% | |
| TACGCCTGGCATTTGGACAA+GGG | + | tig0019233:172426-172445 | Msa1371580:CDS | 50.0% | |
| TGTTCCCTTGTCCAAATGCC+AGG | - | tig0019233:172433-172452 | None:intergenic | 50.0% | |
| TGGCATTTGGACAAGGGAAC+AGG | + | tig0019233:172432-172451 | Msa1371580:CDS | 50.0% | |
| TTGGACAAGGGAACAGGTAG+AGG | + | tig0019233:172438-172457 | Msa1371580:CDS | 50.0% | |
| TTCTGTCAACTTTGGCACGC+CGG | + | tig0019233:172508-172527 | Msa1371580:CDS | 50.0% | |
| TTGGAGGTTTACCTTCAGGC+TGG | - | tig0019233:172670-172689 | None:intergenic | 50.0% | |
| TTTGTGCTTAATCGGCGAGG+AGG | - | tig0019233:172761-172780 | None:intergenic | 50.0% | |
| GCAAGAAATGCCATGGAAGC+AGG | + | tig0019233:172818-172837 | Msa1371580:CDS | 50.0% | |
| !! | GCCATGGAAGCAGGTTTTGA+TGG | + | tig0019233:172827-172846 | Msa1371580:CDS | 50.0% |
| GACAGAGATGACGAGTATGG+AGG | + | tig0019233:172911-172930 | Msa1371580:CDS | 50.0% | |
| TGATGAGATCGGAGCTGACA+AGG | + | tig0019233:172985-173004 | Msa1371580:CDS | 50.0% | |
| AGGCATCAAGGACCATTTGG+TGG | - | tig0019233:173170-173189 | None:intergenic | 50.0% | |
| !! | ATGTGGTGCTGCTGATCTAG+TGG | + | tig0019233:173264-173283 | Msa1371580:CDS | 50.0% |
| GCTGCTGATCTAGTGGCTTA+TGG | + | tig0019233:173271-173290 | Msa1371580:CDS | 50.0% | |
| ATCTTGTATGGGGTGAGCAG+GGG | - | tig0019233:171807-171826 | None:intergenic | 50.0% | |
| CATCTTGTATGGGGTGAGCA+GGG | - | tig0019233:171808-171827 | None:intergenic | 50.0% | |
| CTGCTCACCCCATACAAGAT+GGG | + | tig0019233:171807-171826 | Msa1371580:CDS | 50.0% | |
| GGTGTGTCTAACACAGCACA+AGG | + | tig0019233:172081-172100 | Msa1371580:CDS | 50.0% | |
| ACCCAAATACGCCTGGCATT+TGG | + | tig0019233:172419-172438 | Msa1371580:CDS | 50.0% | |
| GTCCAAATGCCAGGCGTATT+TGG | - | tig0019233:172424-172443 | None:intergenic | 50.0% | |
| ATACGCCTGGCATTTGGACA+AGG | + | tig0019233:172425-172444 | Msa1371580:CDS | 50.0% | |
| TACGCCTGGCATTTGGACAA+GGG | + | tig0019233:172426-172445 | Msa1371580:CDS | 50.0% | |
| TGTTCCCTTGTCCAAATGCC+AGG | - | tig0019233:172433-172452 | None:intergenic | 50.0% | |
| TGGCATTTGGACAAGGGAAC+AGG | + | tig0019233:172432-172451 | Msa1371580:CDS | 50.0% | |
| TTGGACAAGGGAACAGGTAG+AGG | + | tig0019233:172438-172457 | Msa1371580:CDS | 50.0% | |
| TTCTGTCAACTTTGGCACGC+CGG | + | tig0019233:172508-172527 | Msa1371580:CDS | 50.0% | |
| TTGGAGGTTTACCTTCAGGC+TGG | - | tig0019233:172670-172689 | None:intergenic | 50.0% | |
| TTTGTGCTTAATCGGCGAGG+AGG | - | tig0019233:172761-172780 | None:intergenic | 50.0% | |
| GCAAGAAATGCCATGGAAGC+AGG | + | tig0019233:172818-172837 | Msa1371580:CDS | 50.0% | |
| !! | GCCATGGAAGCAGGTTTTGA+TGG | + | tig0019233:172827-172846 | Msa1371580:CDS | 50.0% |
| GACAGAGATGACGAGTATGG+AGG | + | tig0019233:172911-172930 | Msa1371580:CDS | 50.0% | |
| TGATGAGATCGGAGCTGACA+AGG | + | tig0019233:172985-173004 | Msa1371580:CDS | 50.0% | |
| AGGCATCAAGGACCATTTGG+TGG | - | tig0019233:173170-173189 | None:intergenic | 50.0% | |
| !! | ATGTGGTGCTGCTGATCTAG+TGG | + | tig0019233:173264-173283 | Msa1371580:CDS | 50.0% |
| GCTGCTGATCTAGTGGCTTA+TGG | + | tig0019233:173271-173290 | Msa1371580:CDS | 50.0% | |
| CCATCTTGTATGGGGTGAGC+AGG | - | tig0019233:171809-171828 | None:intergenic | 55.0% | |
| CCTGCTCACCCCATACAAGA+TGG | + | tig0019233:171806-171825 | Msa1371580:CDS | 55.0% | |
| CAAGGGAACAGGTAGAGGCA+TGG | + | tig0019233:172443-172462 | Msa1371580:CDS | 55.0% | |
| ! | TTGTCGCTTCCCACTTCGAG+TGG | + | tig0019233:172949-172968 | Msa1371580:CDS | 55.0% |
| CTTCCCACTTCGAGTGGTGA+AGG | + | tig0019233:172955-172974 | Msa1371580:CDS | 55.0% | |
| CTGCCTTCACCACTCGAAGT+GGG | - | tig0019233:172961-172980 | None:intergenic | 55.0% | |
| ACTGCCTTCACCACTCGAAG+TGG | - | tig0019233:172962-172981 | None:intergenic | 55.0% | |
| GAGATCGGAGCTGACAAGGT+TGG | + | tig0019233:172989-173008 | Msa1371580:CDS | 55.0% | |
| !! | GAGCTGACAAGGTTGGTGTG+AGG | + | tig0019233:172996-173015 | Msa1371580:CDS | 55.0% |
| CCATCTTGTATGGGGTGAGC+AGG | - | tig0019233:171809-171828 | None:intergenic | 55.0% | |
| CCTGCTCACCCCATACAAGA+TGG | + | tig0019233:171806-171825 | Msa1371580:CDS | 55.0% | |
| CAAGGGAACAGGTAGAGGCA+TGG | + | tig0019233:172443-172462 | Msa1371580:CDS | 55.0% | |
| ! | TTGTCGCTTCCCACTTCGAG+TGG | + | tig0019233:172949-172968 | Msa1371580:CDS | 55.0% |
| CTTCCCACTTCGAGTGGTGA+AGG | + | tig0019233:172955-172974 | Msa1371580:CDS | 55.0% | |
| CTGCCTTCACCACTCGAAGT+GGG | - | tig0019233:172961-172980 | None:intergenic | 55.0% | |
| ACTGCCTTCACCACTCGAAG+TGG | - | tig0019233:172962-172981 | None:intergenic | 55.0% | |
| GAGATCGGAGCTGACAAGGT+TGG | + | tig0019233:172989-173008 | Msa1371580:CDS | 55.0% | |
| !! | GAGCTGACAAGGTTGGTGTG+AGG | + | tig0019233:172996-173015 | Msa1371580:CDS | 55.0% |
| TGGCGCCGTTAACGCGATCA+AGG | + | tig0019233:171971-171990 | Msa1371580:CDS | 60.0% | |
| GTGCTTAATCGGCGAGGAGG+TGG | - | tig0019233:172758-172777 | None:intergenic | 60.0% | |
| TGGCGCCGTTAACGCGATCA+AGG | + | tig0019233:171971-171990 | Msa1371580:CDS | 60.0% | |
| GTGCTTAATCGGCGAGGAGG+TGG | - | tig0019233:172758-172777 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0019233 | gene | 171731 | 173541 | 171731 | ID=Msa1371580;Name=Msa1371580 |
| tig0019233 | mRNA | 171731 | 173541 | 171731 | ID=Msa1371580-mRNA-1;Parent=Msa1371580;Name=Msa1371580-mRNA-1;_AED=0.00;_eAED=0.00;_QI=31|1|1|1|1|0.75|4|106|377 |
| tig0019233 | exon | 171731 | 171850 | 171731 | ID=Msa1371580-mRNA-1:exon:2287;Parent=Msa1371580-mRNA-1 |
| tig0019233 | exon | 171963 | 172103 | 171963 | ID=Msa1371580-mRNA-1:exon:2288;Parent=Msa1371580-mRNA-1 |
| tig0019233 | exon | 172417 | 172547 | 172417 | ID=Msa1371580-mRNA-1:exon:2289;Parent=Msa1371580-mRNA-1 |
| tig0019233 | exon | 172663 | 173541 | 172663 | ID=Msa1371580-mRNA-1:exon:2290;Parent=Msa1371580-mRNA-1 |
| tig0019233 | five_prime_UTR | 171731 | 171761 | 171731 | ID=Msa1371580-mRNA-1:five_prime_utr;Parent=Msa1371580-mRNA-1 |
| tig0019233 | CDS | 171762 | 171850 | 171762 | ID=Msa1371580-mRNA-1:cds;Parent=Msa1371580-mRNA-1 |
| tig0019233 | CDS | 171963 | 172103 | 171963 | ID=Msa1371580-mRNA-1:cds;Parent=Msa1371580-mRNA-1 |
| tig0019233 | CDS | 172417 | 172547 | 172417 | ID=Msa1371580-mRNA-1:cds;Parent=Msa1371580-mRNA-1 |
| tig0019233 | CDS | 172663 | 173435 | 172663 | ID=Msa1371580-mRNA-1:cds;Parent=Msa1371580-mRNA-1 |
| tig0019233 | three_prime_UTR | 173436 | 173541 | 173436 | ID=Msa1371580-mRNA-1:three_prime_utr;Parent=Msa1371580-mRNA-1 |
| Gene Sequence |
| Protein sequence |
