Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1379710 | PNY12007.1 | 86.807 | 379 | 46 | 1 | 1 | 375 | 1 | 379 | 0.0 | 689 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1379710 | sp|B9FSC8|OPR11_ORYSJ | 65.205 | 365 | 125 | 2 | 13 | 377 | 4 | 366 | 1.40e-180 | 508 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1379710 | A0A2K3P9Q7 | 86.807 | 379 | 46 | 1 | 1 | 375 | 1 | 379 | 0.0 | 689 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0006700 | Msa1379710 | 0.802854 | 4.604443e-49 | -8.615850e-47 |
| Msa0015100 | Msa1379710 | 0.823194 | 1.579592e-53 | -8.615850e-47 |
| Msa0042980 | Msa1379710 | -0.800748 | 1.245776e-48 | -8.615850e-47 |
| Msa0049330 | Msa1379710 | 0.803765 | 2.981851e-49 | -8.615850e-47 |
| Msa0049770 | Msa1379710 | 0.825718 | 4.023536e-54 | -8.615850e-47 |
| Msa0051100 | Msa1379710 | 0.809614 | 1.734209e-50 | -8.615850e-47 |
| Msa0051200 | Msa1379710 | 0.807119 | 5.905469e-50 | -8.615850e-47 |
| Msa0051460 | Msa1379710 | 0.828386 | 9.251646e-55 | -8.615850e-47 |
| Msa0071240 | Msa1379710 | 0.825133 | 5.533820e-54 | -8.615850e-47 |
| Msa0071550 | Msa1379710 | 0.841886 | 3.618867e-58 | -8.615850e-47 |
| Msa0071910 | Msa1379710 | -0.827588 | 1.439664e-54 | -8.615850e-47 |
| Msa0077390 | Msa1379710 | 0.804088 | 2.555139e-49 | -8.615850e-47 |
| Msa0088550 | Msa1379710 | 0.816197 | 6.260979e-52 | -8.615850e-47 |
| Msa0089350 | Msa1379710 | 0.808026 | 3.790292e-50 | -8.615850e-47 |
| Msa0092990 | Msa1379710 | 0.806104 | 9.672839e-50 | -8.615850e-47 |
| Msa0101840 | Msa1379710 | 0.803116 | 4.065329e-49 | -8.615850e-47 |
| Msa0111310 | Msa1379710 | 0.809807 | 1.576460e-50 | -8.615850e-47 |
| Msa0120340 | Msa1379710 | 0.820730 | 5.879147e-53 | -8.615850e-47 |
| Msa1369530 | Msa1379710 | 0.828991 | 6.608694e-55 | -8.615850e-47 |
| Msa1370630 | Msa1379710 | 0.813369 | 2.650229e-51 | -8.615850e-47 |
| Msa1371580 | Msa1379710 | 0.995322 | 4.009256e-215 | -8.615850e-47 |
| Msa1377070 | Msa1379710 | 0.813045 | 3.121783e-51 | -8.615850e-47 |
| Msa1379710 | Msa1382930 | 0.809431 | 1.899036e-50 | -8.615850e-47 |
| Msa1379710 | Msa1401290 | 0.806078 | 9.797263e-50 | -8.615850e-47 |
| Msa1379710 | Msa1424510 | 0.836313 | 1.007067e-56 | -8.615850e-47 |
| Msa1379710 | Msa1427830 | 0.820784 | 5.711512e-53 | -8.615850e-47 |
| Msa1379710 | Msa1438820 | 0.815301 | 9.917506e-52 | -8.615850e-47 |
| Msa1379710 | Msa1438910 | 0.808976 | 2.377298e-50 | -8.615850e-47 |
| Msa1379710 | Msa1444250 | -0.826432 | 2.721405e-54 | -8.615850e-47 |
| Msa1379710 | Msa1444740 | 0.801044 | 1.083862e-48 | -8.615850e-47 |
| Msa1379710 | Msa1451620 | -0.826853 | 2.159962e-54 | -8.615850e-47 |
| Msa1379710 | Msa1454110 | 0.804409 | 2.190208e-49 | -8.615850e-47 |
| Msa1379710 | Msa1458550 | 0.822389 | 2.431412e-53 | -8.615850e-47 |
| Msa1379710 | Msa1462840 | 0.805023 | 1.630551e-49 | -8.615850e-47 |
| Msa0607540 | Msa1379710 | 0.853426 | 2.408314e-61 | -8.615850e-47 |
| Msa0615270 | Msa1379710 | -0.805006 | 1.643862e-49 | -8.615850e-47 |
| Msa0616540 | Msa1379710 | 0.800380 | 1.480829e-48 | -8.615850e-47 |
| Msa0617370 | Msa1379710 | 0.802848 | 4.617883e-49 | -8.615850e-47 |
| Msa0629890 | Msa1379710 | 0.805159 | 1.526935e-49 | -8.615850e-47 |
| Msa0640380 | Msa1379710 | 0.858243 | 9.418998e-63 | -8.615850e-47 |
| Msa0641020 | Msa1379710 | 0.810224 | 1.281921e-50 | -8.615850e-47 |
| Msa0647830 | Msa1379710 | 0.853156 | 2.879113e-61 | -8.615850e-47 |
| Msa0650290 | Msa1379710 | 0.846990 | 1.534467e-59 | -8.615850e-47 |
| Msa0656270 | Msa1379710 | 0.801557 | 8.512302e-49 | -8.615850e-47 |
| Msa0662650 | Msa1379710 | 0.826891 | 2.115133e-54 | -8.615850e-47 |
| Msa0678820 | Msa1379710 | 0.879239 | 1.465052e-69 | -8.615850e-47 |
| Msa0690440 | Msa1379710 | 0.854485 | 1.192713e-61 | -8.615850e-47 |
| Msa0692200 | Msa1379710 | 0.821137 | 4.737123e-53 | -8.615850e-47 |
| Msa0697140 | Msa1379710 | 0.811475 | 6.871372e-51 | -8.615850e-47 |
| Msa0698310 | Msa1379710 | -0.824183 | 9.264908e-54 | -8.615850e-47 |
| Msa0700070 | Msa1379710 | 0.800647 | 1.306402e-48 | -8.615850e-47 |
| Msa0708860 | Msa1379710 | 0.830571 | 2.725445e-55 | -8.615850e-47 |
| Msa0722930 | Msa1379710 | 0.854979 | 8.581019e-62 | -8.615850e-47 |
| Msa0723140 | Msa1379710 | 0.843520 | 1.331907e-58 | -8.615850e-47 |
| Msa0724560 | Msa1379710 | 0.852224 | 5.311427e-61 | -8.615850e-47 |
| Msa0731710 | Msa1379710 | 0.820753 | 5.807416e-53 | -8.615850e-47 |
| Msa0756310 | Msa1379710 | 0.808895 | 2.472961e-50 | -8.615850e-47 |
| Msa0757080 | Msa1379710 | 0.808110 | 3.638538e-50 | -8.615850e-47 |
| Msa0827470 | Msa1379710 | 0.800888 | 1.166869e-48 | -8.615850e-47 |
| Msa0835730 | Msa1379710 | 0.802631 | 5.117933e-49 | -8.615850e-47 |
| Msa0135360 | Msa1379710 | 0.816622 | 5.028644e-52 | -8.615850e-47 |
| Msa0143920 | Msa1379710 | 0.817440 | 3.293818e-52 | -8.615850e-47 |
| Msa0147920 | Msa1379710 | 0.870187 | 1.763112e-66 | -8.615850e-47 |
| Msa0162810 | Msa1379710 | 0.822993 | 1.759691e-53 | -8.615850e-47 |
| Msa0178350 | Msa1379710 | 0.804032 | 2.624035e-49 | -8.615850e-47 |
| Msa0178860 | Msa1379710 | -0.826169 | 3.143480e-54 | -8.615850e-47 |
| Msa0179860 | Msa1379710 | 0.813786 | 2.145343e-51 | -8.615850e-47 |
| Msa0185640 | Msa1379710 | -0.820704 | 5.957996e-53 | -8.615850e-47 |
| Msa0191010 | Msa1379710 | 0.820697 | 5.980398e-53 | -8.615850e-47 |
| Msa0191630 | Msa1379710 | 0.840691 | 7.466222e-58 | -8.615850e-47 |
| Msa0198440 | Msa1379710 | 0.817396 | 3.370652e-52 | -8.615850e-47 |
| Msa0223290 | Msa1379710 | 0.801445 | 8.975633e-49 | -8.615850e-47 |
| Msa0223380 | Msa1379710 | 0.829485 | 5.012713e-55 | -8.615850e-47 |
| Msa0233310 | Msa1379710 | 0.828507 | 8.653239e-55 | -8.615850e-47 |
| Msa0233610 | Msa1379710 | 0.807057 | 6.087421e-50 | -8.615850e-47 |
| Msa1228160 | Msa1379710 | -0.815968 | 7.044857e-52 | -8.615850e-47 |
| Msa1228310 | Msa1379710 | 0.833998 | 3.864800e-56 | -8.615850e-47 |
| Msa1233500 | Msa1379710 | 0.850820 | 1.326090e-60 | -8.615850e-47 |
| Msa1256540 | Msa1379710 | -0.821819 | 3.297068e-53 | -8.615850e-47 |
| Msa1258380 | Msa1379710 | -0.830962 | 2.185413e-55 | -8.615850e-47 |
| Msa1271200 | Msa1379710 | 0.854577 | 1.121677e-61 | -8.615850e-47 |
| Msa1275770 | Msa1379710 | 0.804820 | 1.798113e-49 | -8.615850e-47 |
| Msa1279210 | Msa1379710 | 0.803687 | 3.094764e-49 | -8.615850e-47 |
| Msa1296960 | Msa1379710 | -0.822299 | 2.551615e-53 | -8.615850e-47 |
| Msa1300350 | Msa1379710 | -0.812174 | 4.842196e-51 | -8.615850e-47 |
| Msa1304840 | Msa1379710 | 0.813666 | 2.280148e-51 | -8.615850e-47 |
| Msa1306750 | Msa1379710 | 0.803334 | 3.663199e-49 | -8.615850e-47 |
| Msa1307740 | Msa1379710 | 0.844022 | 9.777842e-59 | -8.615850e-47 |
| Msa1308480 | Msa1379710 | 0.827395 | 1.602192e-54 | -8.615850e-47 |
| Msa1308590 | Msa1379710 | 0.803380 | 3.583325e-49 | -8.615850e-47 |
| Msa1316560 | Msa1379710 | -0.822365 | 2.463066e-53 | -8.615850e-47 |
| Msa1322190 | Msa1379710 | 0.837156 | 6.139214e-57 | -8.615850e-47 |
| Msa1335970 | Msa1379710 | -0.815076 | 1.112805e-51 | -8.615850e-47 |
| Msa0366470 | Msa1379710 | 0.811461 | 6.920888e-51 | -8.615850e-47 |
| Msa0371420 | Msa1379710 | -0.838424 | 2.899552e-57 | -8.615850e-47 |
| Msa0379820 | Msa1379710 | 0.808159 | 3.552514e-50 | -8.615850e-47 |
| Msa0381410 | Msa1379710 | 0.812467 | 4.177906e-51 | -8.615850e-47 |
| Msa0389360 | Msa1379710 | 0.845279 | 4.483997e-59 | -8.615850e-47 |
| Msa0389810 | Msa1379710 | 0.853260 | 2.687529e-61 | -8.615850e-47 |
| Msa0411000 | Msa1379710 | 0.811891 | 5.578885e-51 | -8.615850e-47 |
| Msa0414070 | Msa1379710 | 0.825459 | 4.634673e-54 | -8.615850e-47 |
| Msa0419620 | Msa1379710 | -0.849142 | 3.910382e-60 | -8.615850e-47 |
| Msa0431520 | Msa1379710 | 0.810301 | 1.233712e-50 | -8.615850e-47 |
| Msa0431830 | Msa1379710 | 0.810715 | 1.004280e-50 | -8.615850e-47 |
| Msa0438050 | Msa1379710 | 0.835896 | 1.285117e-56 | -8.615850e-47 |
| Msa0442850 | Msa1379710 | 0.818604 | 1.797288e-52 | -8.615850e-47 |
| Msa0444090 | Msa1379710 | 0.818356 | 2.045710e-52 | -8.615850e-47 |
| Msa0454940 | Msa1379710 | 0.822337 | 2.500153e-53 | -8.615850e-47 |
| Msa0455230 | Msa1379710 | 0.812398 | 4.326540e-51 | -8.615850e-47 |
| Msa0457010 | Msa1379710 | 0.809645 | 1.707981e-50 | -8.615850e-47 |
| Msa0459120 | Msa1379710 | 0.823828 | 1.122429e-53 | -8.615850e-47 |
| Msa0464900 | Msa1379710 | 0.822407 | 2.408454e-53 | -8.615850e-47 |
| Msa0465680 | Msa1379710 | -0.865016 | 8.012935e-65 | -8.615850e-47 |
| Msa0468130 | Msa1379710 | 0.835120 | 2.018296e-56 | -8.615850e-47 |
| Msa0473240 | Msa1379710 | 0.809539 | 1.800175e-50 | -8.615850e-47 |
| Msa0482190 | Msa1379710 | -0.833564 | 4.960378e-56 | -8.615850e-47 |
| Msa0982270 | Msa1379710 | 0.845626 | 3.611942e-59 | -8.615850e-47 |
| Msa0992490 | Msa1379710 | -0.805912 | 1.061479e-49 | -8.615850e-47 |
| Msa0999040 | Msa1379710 | 0.817207 | 3.717001e-52 | -8.615850e-47 |
| Msa1000020 | Msa1379710 | 0.847922 | 8.510804e-60 | -8.615850e-47 |
| Msa1002480 | Msa1379710 | 0.820901 | 5.367575e-53 | -8.615850e-47 |
| Msa1005420 | Msa1379710 | 0.800591 | 1.341590e-48 | -8.615850e-47 |
| Msa1006850 | Msa1379710 | 0.810781 | 9.716128e-51 | -8.615850e-47 |
| Msa1021340 | Msa1379710 | 0.857931 | 1.165855e-62 | -8.615850e-47 |
| Msa1037700 | Msa1379710 | -0.811432 | 7.023507e-51 | -8.615850e-47 |
| Msa1039880 | Msa1379710 | 0.810012 | 1.423935e-50 | -8.615850e-47 |
| Msa1047720 | Msa1379710 | 0.801432 | 9.030707e-49 | -8.615850e-47 |
| Msa1054410 | Msa1379710 | 0.869669 | 2.603213e-66 | -8.615850e-47 |
| Msa1060070 | Msa1379710 | 0.802115 | 6.538981e-49 | -8.615850e-47 |
| Msa1075080 | Msa1379710 | -0.804893 | 1.735826e-49 | -8.615850e-47 |
| Msa1080790 | Msa1379710 | 0.864467 | 1.190410e-64 | -8.615850e-47 |
| Msa1085960 | Msa1379710 | -0.805755 | 1.145562e-49 | -8.615850e-47 |
| Msa1091670 | Msa1379710 | 0.812515 | 4.078120e-51 | -8.615850e-47 |
| Msa1092090 | Msa1379710 | 0.831375 | 1.730290e-55 | -8.615850e-47 |
| Msa1105270 | Msa1379710 | 0.821550 | 3.804095e-53 | -8.615850e-47 |
| Msa0240780 | Msa1379710 | 0.824350 | 8.464778e-54 | -8.615850e-47 |
| Msa0265210 | Msa1379710 | 0.810031 | 1.410715e-50 | -8.615850e-47 |
| Msa0269450 | Msa1379710 | 0.819283 | 1.260095e-52 | -8.615850e-47 |
| Msa0278670 | Msa1379710 | 0.818267 | 2.142563e-52 | -8.615850e-47 |
| Msa0280660 | Msa1379710 | -0.809613 | 1.735035e-50 | -8.615850e-47 |
| Msa0303200 | Msa1379710 | 0.806225 | 9.123071e-50 | -8.615850e-47 |
| Msa0318070 | Msa1379710 | 0.801325 | 9.495707e-49 | -8.615850e-47 |
| Msa0326670 | Msa1379710 | 0.815608 | 8.473108e-52 | -8.615850e-47 |
| Msa0342340 | Msa1379710 | -0.817844 | 2.670465e-52 | -8.615850e-47 |
| Msa0344830 | Msa1379710 | 0.818578 | 1.821685e-52 | -8.615850e-47 |
| Msa0347650 | Msa1379710 | 0.801085 | 1.063314e-48 | -8.615850e-47 |
| Msa0362430 | Msa1379710 | 0.819572 | 1.082317e-52 | -8.615850e-47 |
| Msa0363460 | Msa1379710 | 0.814379 | 1.587463e-51 | -8.615850e-47 |
| Msa1118930 | Msa1379710 | 0.869903 | 2.183851e-66 | -8.615850e-47 |
| Msa1125080 | Msa1379710 | 0.810582 | 1.073240e-50 | -8.615850e-47 |
| Msa1141250 | Msa1379710 | -0.841875 | 3.644124e-58 | -8.615850e-47 |
| Msa1142500 | Msa1379710 | 0.809379 | 1.948136e-50 | -8.615850e-47 |
| Msa1142850 | Msa1379710 | -0.802101 | 6.583155e-49 | -8.615850e-47 |
| Msa1148720 | Msa1379710 | 0.857766 | 1.305212e-62 | -8.615850e-47 |
| Msa1148750 | Msa1379710 | 0.847978 | 8.214090e-60 | -8.615850e-47 |
| Msa1157020 | Msa1379710 | 0.806537 | 7.838261e-50 | -8.615850e-47 |
| Msa1158670 | Msa1379710 | 0.804691 | 1.913235e-49 | -8.615850e-47 |
| Msa1167220 | Msa1379710 | 0.801573 | 8.448170e-49 | -8.615850e-47 |
| Msa1204160 | Msa1379710 | -0.816877 | 4.407957e-52 | -8.615850e-47 |
| Msa1204190 | Msa1379710 | -0.801597 | 8.351802e-49 | -8.615850e-47 |
| Msa1204980 | Msa1379710 | -0.821356 | 4.216982e-53 | -8.615850e-47 |
| Msa1205010 | Msa1379710 | -0.823773 | 1.156417e-53 | -8.615850e-47 |
| Msa1205130 | Msa1379710 | 0.822164 | 2.741921e-53 | -8.615850e-47 |
| Msa1208180 | Msa1379710 | 0.824322 | 8.596281e-54 | -8.615850e-47 |
| Msa1208340 | Msa1379710 | 0.828665 | 7.924147e-55 | -8.615850e-47 |
| Msa1211390 | Msa1379710 | 0.801595 | 8.362679e-49 | -8.615850e-47 |
| Msa1213440 | Msa1379710 | -0.808288 | 3.333642e-50 | -8.615850e-47 |
| Msa1217810 | Msa1379710 | 0.839971 | 1.151046e-57 | -8.615850e-47 |
| Msa0485500 | Msa1379710 | -0.829689 | 4.473371e-55 | -8.615850e-47 |
| Msa0491500 | Msa1379710 | 0.814589 | 1.426802e-51 | -8.615850e-47 |
| Msa0491520 | Msa1379710 | 0.810683 | 1.020296e-50 | -8.615850e-47 |
| Msa0502910 | Msa1379710 | 0.841686 | 4.087864e-58 | -8.615850e-47 |
| Msa0505660 | Msa1379710 | 0.815255 | 1.015323e-51 | -8.615850e-47 |
| Msa0511720 | Msa1379710 | -0.831255 | 1.851161e-55 | -8.615850e-47 |
| Msa0524890 | Msa1379710 | -0.814231 | 1.712036e-51 | -8.615850e-47 |
| Msa0527250 | Msa1379710 | 0.995363 | 1.592944e-215 | -8.615850e-47 |
| Msa0528970 | Msa1379710 | 0.823114 | 1.648328e-53 | -8.615850e-47 |
| Msa0540070 | Msa1379710 | 0.810583 | 1.072562e-50 | -8.615850e-47 |
| Msa0543900 | Msa1379710 | 0.873066 | 1.960777e-67 | -8.615850e-47 |
| Msa0553460 | Msa1379710 | 0.858753 | 6.635638e-63 | -8.615850e-47 |
| Msa0561130 | Msa1379710 | -0.816429 | 5.556241e-52 | -8.615850e-47 |
| Msa0563140 | Msa1379710 | 0.806553 | 7.779177e-50 | -8.615850e-47 |
| Msa0564510 | Msa1379710 | 0.802391 | 5.736820e-49 | -8.615850e-47 |
| Msa0576990 | Msa1379710 | -0.812458 | 4.196645e-51 | -8.615850e-47 |
| Msa0599580 | Msa1379710 | 0.863703 | 2.060615e-64 | -8.615850e-47 |
| Msa0599770 | Msa1379710 | 0.871381 | 7.135303e-67 | -8.615850e-47 |
| Msa0843280 | Msa1379710 | 0.836307 | 1.010352e-56 | -8.615850e-47 |
| Msa0844900 | Msa1379710 | 0.810079 | 1.377856e-50 | -8.615850e-47 |
| Msa0847200 | Msa1379710 | 0.800979 | 1.117561e-48 | -8.615850e-47 |
| Msa0848900 | Msa1379710 | 0.851075 | 1.123503e-60 | -8.615850e-47 |
| Msa0860410 | Msa1379710 | 0.807846 | 4.140363e-50 | -8.615850e-47 |
| Msa0900200 | Msa1379710 | 0.829741 | 4.344487e-55 | -8.615850e-47 |
| Msa0908170 | Msa1379710 | 0.818842 | 1.587337e-52 | -8.615850e-47 |
| Msa0910980 | Msa1379710 | -0.811205 | 7.863933e-51 | -8.615850e-47 |
| Msa0919520 | Msa1379710 | 0.851442 | 8.854250e-61 | -8.615850e-47 |
| Msa0926800 | Msa1379710 | 0.800550 | 1.367148e-48 | -8.615850e-47 |
| Msa0927670 | Msa1379710 | 0.820234 | 7.638207e-53 | -8.615850e-47 |
| Msa0944550 | Msa1379710 | 0.807742 | 4.357133e-50 | -8.615850e-47 |
| Msa0951720 | Msa1379710 | 0.820283 | 7.444542e-53 | -8.615850e-47 |
| Msa0961420 | Msa1379710 | -0.838629 | 2.567615e-57 | -8.615850e-47 |
| Msa0965520 | Msa1379710 | 0.860707 | 1.712589e-63 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1379710 | MtrunA17_Chr3g0144001 | 75.946 | 370 | 83 | 3 | 7 | 376 | 1 | 364 | 0.0 | 591 |
| Msa1379710 | MtrunA17_Chr5g0394891 | 67.213 | 366 | 118 | 2 | 10 | 375 | 6 | 369 | 0.0 | 525 |
| Msa1379710 | MtrunA17_Chr5g0394771 | 66.942 | 363 | 112 | 4 | 13 | 375 | 37 | 391 | 1.94e-180 | 506 |
| Msa1379710 | MtrunA17_Chr5g0394841 | 65.110 | 364 | 123 | 3 | 14 | 375 | 10 | 371 | 1.25e-178 | 501 |
| Msa1379710 | MtrunA17_Chr5g0394861 | 66.209 | 364 | 119 | 3 | 14 | 375 | 10 | 371 | 1.90e-177 | 498 |
| Msa1379710 | MtrunA17_Chr5g0394751 | 65.746 | 362 | 116 | 4 | 14 | 375 | 6 | 359 | 1.69e-176 | 495 |
| Msa1379710 | MtrunA17_Chr5g0394811 | 65.470 | 362 | 123 | 2 | 14 | 375 | 119 | 478 | 1.90e-175 | 497 |
| Msa1379710 | MtrunA17_Chr5g0394811 | 77.320 | 97 | 22 | 0 | 22 | 118 | 1 | 97 | 8.70e-47 | 166 |
| Msa1379710 | MtrunA17_Chr5g0395841 | 60.916 | 371 | 140 | 3 | 4 | 374 | 5 | 370 | 2.08e-168 | 475 |
| Msa1379710 | MtrunA17_Chr4g0070561 | 52.022 | 371 | 165 | 4 | 16 | 374 | 19 | 388 | 4.73e-135 | 391 |
| Msa1379710 | MtrunA17_Chr5g0394791 | 61.932 | 176 | 59 | 2 | 5 | 180 | 2 | 169 | 4.54e-70 | 218 |
| Msa1379710 | MtrunA17_Chr5g0394801 | 51.852 | 189 | 62 | 2 | 179 | 367 | 26 | 185 | 6.19e-60 | 194 |
| Msa1379710 | MtrunA17_Chr3g0130471 | 58.182 | 55 | 20 | 1 | 198 | 252 | 1 | 52 | 2.87e-14 | 68.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1379710 | AT1G76690.1 | 64.171 | 374 | 128 | 3 | 6 | 377 | 4 | 373 | 0.0 | 508 |
| Msa1379710 | AT1G76680.1 | 65.229 | 371 | 123 | 3 | 9 | 377 | 5 | 371 | 0.0 | 508 |
| Msa1379710 | AT1G76680.2 | 61.111 | 396 | 123 | 4 | 9 | 377 | 5 | 396 | 2.64e-175 | 494 |
| Msa1379710 | AT1G09400.1 | 64.134 | 329 | 107 | 3 | 22 | 348 | 1 | 320 | 1.26e-156 | 443 |
| Msa1379710 | AT1G09400.2 | 65.056 | 269 | 83 | 3 | 82 | 348 | 2 | 261 | 1.60e-127 | 367 |
| Msa1379710 | AT2G06050.2 | 48.819 | 381 | 178 | 5 | 10 | 374 | 6 | 385 | 1.26e-125 | 367 |
| Msa1379710 | AT2G06050.1 | 48.819 | 381 | 178 | 5 | 10 | 374 | 6 | 385 | 1.26e-125 | 367 |
| Msa1379710 | AT2G06050.3 | 48.819 | 381 | 178 | 5 | 10 | 374 | 6 | 385 | 1.26e-125 | 367 |
| Msa1379710 | AT1G17990.1 | 58.781 | 279 | 102 | 4 | 8 | 285 | 1 | 267 | 4.44e-119 | 346 |
| Msa1379710 | AT1G18020.1 | 58.781 | 279 | 102 | 4 | 8 | 285 | 1 | 267 | 4.44e-119 | 346 |
| Msa1379710 | AT1G17990.2 | 56.272 | 279 | 101 | 5 | 8 | 285 | 1 | 259 | 1.49e-110 | 324 |
Find 109 sgRNAs with CRISPR-Local
Find 268 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTAGATAGTACTAGTTATTT+TGG | 0.113729 | tig0020281:+102195 | None:intergenic |
| GTCCAAATGCCAGGCGTATT+TGG | 0.175163 | tig0020281:+103197 | None:intergenic |
| ATACACACACGTACCATATT+TGG | 0.213055 | tig0020281:+103079 | None:intergenic |
| CCTTTGAACACCTTCCTAAT+AGG | 0.291774 | tig0020281:+102431 | None:intergenic |
| AATGGTCCTTGATGCCTATT+AGG | 0.301603 | tig0020281:-102445 | Msa1379710:CDS |
| GCTGCTGATCTAGTGGCTTA+TGG | 0.307172 | tig0020281:-102347 | Msa1379710:CDS |
| GGCTGAATCATTGAATCAAT+TGG | 0.309770 | tig0020281:-102534 | Msa1379710:CDS |
| AAAGGGACATTTATTGTTGC+TGG | 0.324243 | tig0020281:-102413 | Msa1379710:CDS |
| GACAGGATCATGCGTATAAA+AGG | 0.327954 | tig0020281:+102244 | None:intergenic |
| GGATTTCATTTGTGCTTAAT+CGG | 0.331257 | tig0020281:+102852 | None:intergenic |
| ACTAAGGGTGGCTTCTTGAT+TGG | 0.336328 | tig0020281:-103570 | Msa1379710:CDS |
| GGCTTGTTTGTGCATGATAT+TGG | 0.338072 | tig0020281:+102932 | None:intergenic |
| GTGCGCCAAGTTCATGAAAA+AGG | 0.339105 | tig0020281:-103143 | Msa1379710:CDS |
| CTAAGGGTGGCTTCTTGATT+GGG | 0.342918 | tig0020281:-103569 | Msa1379710:CDS |
| TCCAAATGCCAGGCGTATTT+GGG | 0.350536 | tig0020281:+103198 | None:intergenic |
| TATGACCTTGATCGCGTTAA+CGG | 0.364577 | tig0020281:+103642 | None:intergenic |
| TTAAAGTTTCCCATCTTGTA+TGG | 0.364982 | tig0020281:+103802 | None:intergenic |
| GTGAAGTAAGTAGAGATAGA+AGG | 0.373385 | tig0020281:-103879 | Msa1379710:five_prime_UTR |
| GACTCTGATCCTCAAGTATT+GGG | 0.377448 | tig0020281:-102566 | Msa1379710:CDS |
| CCATCTTGTATGGGGTGAGC+AGG | 0.381597 | tig0020281:+103812 | None:intergenic |
| ACCCAAATACGCCTGGCATT+TGG | 0.384553 | tig0020281:-103199 | Msa1379710:CDS |
| TTGTTGCTGGAGGTTATGAT+AGG | 0.394121 | tig0020281:-102400 | Msa1379710:CDS |
| ATTAGCTGCAGCAGGATCAT+TGG | 0.397402 | tig0020281:+102892 | None:intergenic |
| TTAAATTGTGTAACCATCCT+TGG | 0.400376 | tig0020281:+102485 | None:intergenic |
| TCATGAACTTGGCGCACAAT+TGG | 0.406981 | tig0020281:+103149 | None:intergenic |
| ACCATATTTGGATACTCTTC+CGG | 0.408173 | tig0020281:+103091 | None:intergenic |
| GATATTGGAGGTTTACCTTC+AGG | 0.416474 | tig0020281:+102947 | None:intergenic |
| TAATAGACTATATATTGATT+AGG | 0.423221 | tig0020281:-102113 | Msa1379710:three_prime_UTR |
| TTCTTGATTGGGGAAGCATC+TGG | 0.424746 | tig0020281:-103558 | Msa1379710:CDS |
| GTATAAAAGGTAGTTGGATC+AGG | 0.427027 | tig0020281:+102257 | None:intergenic |
| CTTGCTTGATCAATTTCTAA+AGG | 0.427817 | tig0020281:-102741 | Msa1379710:CDS |
| AACGACAGAGATGACGAGTA+TGG | 0.432506 | tig0020281:-102710 | Msa1379710:CDS |
| GCCGGAAGAGTATCCAAATA+TGG | 0.433682 | tig0020281:-103092 | Msa1379710:intron |
| TATACGCATGATCCTGTCCT+TGG | 0.445992 | tig0020281:-102239 | Msa1379710:CDS |
| AATAGGCATCAAGGACCATT+TGG | 0.455116 | tig0020281:+102448 | None:intergenic |
| TGGCATTTGGACAAGGGAAC+AGG | 0.464254 | tig0020281:-103186 | Msa1379710:CDS |
| CATCTTGTATGGGGTGAGCA+GGG | 0.471532 | tig0020281:+103813 | None:intergenic |
| TTATTCTCAAAGATCAACTA+AGG | 0.473661 | tig0020281:-103586 | Msa1379710:CDS |
| GCTGAATCATTGAATCAATT+GGG | 0.474970 | tig0020281:-102533 | Msa1379710:CDS |
| AGAGATAGAAGGATGACTAA+AGG | 0.476048 | tig0020281:-103868 | Msa1379710:exon |
| GCAAGAAATGCCATGGAAGC+AGG | 0.479264 | tig0020281:-102800 | Msa1379710:CDS |
| GTAGAGATACATGGAGCTAA+TGG | 0.479754 | tig0020281:-102767 | Msa1379710:CDS |
| GTGCTTAATCGGCGAGGAGG+TGG | 0.494140 | tig0020281:+102863 | None:intergenic |
| TTGGACAAGGGAACAGGTAG+AGG | 0.495054 | tig0020281:-103180 | Msa1379710:CDS |
| TAAAGTTTCCCATCTTGTAT+GGG | 0.501559 | tig0020281:+103803 | None:intergenic |
| TATGATAGGAGTGAAGGAAA+TGG | 0.503378 | tig0020281:-102386 | Msa1379710:CDS |
| AGACTCTGATCCTCAAGTAT+TGG | 0.505390 | tig0020281:-102567 | Msa1379710:CDS |
| TCCATCAAAACCTGCTTCCA+TGG | 0.506298 | tig0020281:+102790 | None:intergenic |
| TCAAGTATTGGGTATTTACA+TGG | 0.517434 | tig0020281:-102555 | Msa1379710:CDS |
| CCTGCTCACCCCATACAAGA+TGG | 0.518048 | tig0020281:-103812 | Msa1379710:CDS |
| TGTTCCCTTGTCCAAATGCC+AGG | 0.522788 | tig0020281:+103188 | None:intergenic |
| GGATATTGATTAGCTGCAGC+AGG | 0.526559 | tig0020281:+102884 | None:intergenic |
| CTTCCCACTTCGAGTGGTGA+AGG | 0.529500 | tig0020281:-102663 | Msa1379710:CDS |
| TTGGAGGTTTACCTTCAGGC+TGG | 0.534090 | tig0020281:+102951 | None:intergenic |
| CCTATTAGGAAGGTGTTCAA+AGG | 0.534129 | tig0020281:-102431 | Msa1379710:CDS |
| TTAATACGACAGGATAGTGT+TGG | 0.537539 | tig0020281:-103667 | Msa1379710:intron |
| CACCTTCCTAATAGGCATCA+AGG | 0.537835 | tig0020281:+102439 | None:intergenic |
| TTGGAGATATCTTTCTGAAG+AGG | 0.538385 | tig0020281:+102911 | None:intergenic |
| TTGTTTGTGCATGATATTGG+AGG | 0.543879 | tig0020281:+102935 | None:intergenic |
| CTATTAGGAAGGTGTTCAAA+GGG | 0.545620 | tig0020281:-102430 | Msa1379710:CDS |
| TCATGCGTATAAAAGGTAGT+TGG | 0.551693 | tig0020281:+102251 | None:intergenic |
| AAAAGGTACCCAAATACGCC+TGG | 0.553805 | tig0020281:-103206 | Msa1379710:intron |
| ATCTTGTATGGGGTGAGCAG+GGG | 0.554437 | tig0020281:+103814 | None:intergenic |
| TTTGATGGAGTAGAGATACA+TGG | 0.555461 | tig0020281:-102776 | Msa1379710:CDS |
| ATACGCCTGGCATTTGGACA+AGG | 0.556441 | tig0020281:-103193 | Msa1379710:CDS |
| TTCTGTCAACTTTGGCACGC+CGG | 0.558422 | tig0020281:-103110 | Msa1379710:CDS |
| ATGTGGTGCTGCTGATCTAG+TGG | 0.559206 | tig0020281:-102354 | Msa1379710:CDS |
| ACAAGTGTGACACCACCAAA+TGG | 0.560123 | tig0020281:-102463 | Msa1379710:CDS |
| TGGCGCCGTTAACGCGATCA+AGG | 0.570814 | tig0020281:-103647 | Msa1379710:CDS |
| GATGACTAAAGGAGAAGTAA+TGG | 0.579090 | tig0020281:-103857 | Msa1379710:CDS |
| TAAGGGTGGCTTCTTGATTG+GGG | 0.580264 | tig0020281:-103568 | Msa1379710:CDS |
| GTCCTTGATGCCTATTAGGA+AGG | 0.582773 | tig0020281:-102441 | Msa1379710:CDS |
| ATGGATAATCACTATATCCA+AGG | 0.584629 | tig0020281:+102222 | None:intergenic |
| TAATCACTATATCCAAGGAC+AGG | 0.584850 | tig0020281:+102227 | None:intergenic |
| CTGCTCACCCCATACAAGAT+GGG | 0.585227 | tig0020281:-103811 | Msa1379710:CDS |
| AAAGTTTCCCATCTTGTATG+GGG | 0.586684 | tig0020281:+103804 | None:intergenic |
| GAAACTTTAATCTATCTCAC+AGG | 0.587121 | tig0020281:-103789 | Msa1379710:intron |
| AATTGCTGCAAGAAATGCCA+TGG | 0.589036 | tig0020281:-102807 | Msa1379710:CDS |
| AAAGGAGAAGTAATGGTCGA+TGG | 0.589838 | tig0020281:-103850 | Msa1379710:CDS |
| GGAGGTTATGATAGGAGTGA+AGG | 0.591271 | tig0020281:-102392 | Msa1379710:CDS |
| TCTCAAAGATCAACTAAGGG+TGG | 0.594762 | tig0020281:-103582 | Msa1379710:CDS |
| TTGTCGCTTCCCACTTCGAG+TGG | 0.596275 | tig0020281:-102669 | Msa1379710:CDS |
| ACTGCCTTCACCACTCGAAG+TGG | 0.598555 | tig0020281:+102659 | None:intergenic |
| TGAAGTCATTGACAAGCATG+TGG | 0.600270 | tig0020281:+102831 | None:intergenic |
| GGGACATTTATTGTTGCTGG+AGG | 0.600926 | tig0020281:-102410 | Msa1379710:CDS |
| AAGGCAGTAGCTGATGAGAT+CGG | 0.601265 | tig0020281:-102644 | Msa1379710:CDS |
| AGGCATCAAGGACCATTTGG+TGG | 0.602094 | tig0020281:+102451 | None:intergenic |
| TGATGAGATCGGAGCTGACA+AGG | 0.615859 | tig0020281:-102633 | Msa1379710:CDS |
| TATAAAAGGTAGTTGGATCA+GGG | 0.616334 | tig0020281:+102258 | None:intergenic |
| CAAGGGAACAGGTAGAGGCA+TGG | 0.618836 | tig0020281:-103175 | Msa1379710:CDS |
| TCATATGATTGAGCCAAGGA+TGG | 0.619695 | tig0020281:-102498 | Msa1379710:CDS |
| GGTGTGTCTAACACAGCACA+AGG | 0.629575 | tig0020281:-103537 | Msa1379710:CDS |
| TACGCCTGGCATTTGGACAA+GGG | 0.635846 | tig0020281:-103192 | Msa1379710:CDS |
| ATGTAAATACCCAATACTTG+AGG | 0.640485 | tig0020281:+102557 | None:intergenic |
| TTTGTGCTTAATCGGCGAGG+AGG | 0.648362 | tig0020281:+102860 | None:intergenic |
| TATTCTCAAAGATCAACTAA+GGG | 0.648427 | tig0020281:-103585 | Msa1379710:CDS |
| GATGTAGTATACCAGCCTGA+AGG | 0.656347 | tig0020281:-102962 | Msa1379710:intron |
| AAAAGGTAGTTGGATCAGGG+TGG | 0.658195 | tig0020281:+102261 | None:intergenic |
| CTGCCTTCACCACTCGAAGT+GGG | 0.659608 | tig0020281:+102660 | None:intergenic |
| GAGATCGGAGCTGACAAGGT+TGG | 0.665946 | tig0020281:-102629 | Msa1379710:CDS |
| TCATTTGTGCTTAATCGGCG+AGG | 0.670046 | tig0020281:+102857 | None:intergenic |
| CAATCATTATAATCAGCGAA+AGG | 0.671533 | tig0020281:+102593 | None:intergenic |
| GAATAATATGAAACAGCATG+AGG | 0.679009 | tig0020281:+103603 | None:intergenic |
| GACAGAGATGACGAGTATGG+AGG | 0.692429 | tig0020281:-102707 | Msa1379710:CDS |
| TAAAAGATTTGAACTCAACG+TGG | 0.709690 | tig0020281:-102294 | Msa1379710:CDS |
| GAGCTGACAAGGTTGGTGTG+AGG | 0.727383 | tig0020281:-102622 | Msa1379710:CDS |
| ACTGTCATATGATTGAGCCA+AGG | 0.734502 | tig0020281:-102502 | Msa1379710:CDS |
| GGAAATGGTGCTATAGCATG+TGG | 0.744862 | tig0020281:-102371 | Msa1379710:CDS |
| GTGTGTCTAACACAGCACAA+GGG | 0.755183 | tig0020281:-103536 | Msa1379710:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAATGATTAATAAAATTAC+CGG | + | tig0020281:102540-102559 | None:intergenic | 10.0% |
| !! | TAATAATATACACATATAAT+TGG | - | tig0020281:103002-103021 | Msa1379710:intron | 10.0% |
| !! | ATAATGATTAATAAAATTAC+CGG | + | tig0020281:102540-102559 | None:intergenic | 10.0% |
| !! | TAATAATATACACATATAAT+TGG | - | tig0020281:103002-103021 | Msa1379710:intron | 10.0% |
| !!! | TTAATTTAATTTAATACGAC+AGG | - | tig0020281:102309-102328 | Msa1379710:CDS | 15.0% |
| !! | AATTTATAAATTAATTCGAC+CGG | - | tig0020281:102518-102537 | Msa1379710:CDS | 15.0% |
| !!! | TAATAGACTATATATTGATT+AGG | - | tig0020281:103873-103892 | Msa1379710:exon | 15.0% |
| !!! | TTAATTTAATTTAATACGAC+AGG | - | tig0020281:102309-102328 | Msa1379710:CDS | 15.0% |
| !! | AATTTATAAATTAATTCGAC+CGG | - | tig0020281:102518-102537 | Msa1379710:CDS | 15.0% |
| !!! | TAATAGACTATATATTGATT+AGG | - | tig0020281:103873-103892 | Msa1379710:exon | 15.0% |
| !! | TTGATGAGTGAAAAAATTAA+TGG | - | tig0020281:102671-102690 | Msa1379710:CDS | 20.0% |
| !! | TGAAATAAAATCCTTGTAAT+GGG | + | tig0020281:102939-102958 | None:intergenic | 20.0% |
| !! | ATGAAATAAAATCCTTGTAA+TGG | + | tig0020281:102940-102959 | None:intergenic | 20.0% |
| !! | TTGATGAGTGAAAAAATTAA+TGG | - | tig0020281:102671-102690 | Msa1379710:CDS | 20.0% |
| !! | TGAAATAAAATCCTTGTAAT+GGG | + | tig0020281:102939-102958 | None:intergenic | 20.0% |
| !! | ATGAAATAAAATCCTTGTAA+TGG | + | tig0020281:102940-102959 | None:intergenic | 20.0% |
| !!! | GTGTGTGTTTTTTTTCTTTT+TGG | - | tig0020281:102261-102280 | Msa1379710:CDS | 25.0% |
| ! | TTATTCTCAAAGATCAACTA+AGG | - | tig0020281:102400-102419 | Msa1379710:CDS | 25.0% |
| ! | TATTCTCAAAGATCAACTAA+GGG | - | tig0020281:102401-102420 | Msa1379710:CDS | 25.0% |
| ! | AAACAACGCCAAAATTAATT+GGG | - | tig0020281:102636-102655 | Msa1379710:CDS | 25.0% |
| !!! | ATTTTTTCACTCATCAACAA+TGG | + | tig0020281:102668-102687 | None:intergenic | 25.0% |
| !! | AAAATTAATGGAGCAGATTT+TGG | - | tig0020281:102683-102702 | Msa1379710:CDS | 25.0% |
| ! | AACATGGATGATCAAATAAA+AGG | - | tig0020281:102763-102782 | Msa1379710:CDS | 25.0% |
| ! | TGTATATTTATCCCATTACA+AGG | - | tig0020281:102925-102944 | Msa1379710:CDS | 25.0% |
| !!! | TACTAGTTATTTTGGAGAAA+TGG | + | tig0020281:103786-103805 | None:intergenic | 25.0% |
| !! | CTAGATAGTACTAGTTATTT+TGG | + | tig0020281:103794-103813 | None:intergenic | 25.0% |
| !!! | GTGTGTGTTTTTTTTCTTTT+TGG | - | tig0020281:102261-102280 | Msa1379710:CDS | 25.0% |
| ! | TTATTCTCAAAGATCAACTA+AGG | - | tig0020281:102400-102419 | Msa1379710:CDS | 25.0% |
| ! | TATTCTCAAAGATCAACTAA+GGG | - | tig0020281:102401-102420 | Msa1379710:CDS | 25.0% |
| ! | AAACAACGCCAAAATTAATT+GGG | - | tig0020281:102636-102655 | Msa1379710:CDS | 25.0% |
| !!! | ATTTTTTCACTCATCAACAA+TGG | + | tig0020281:102668-102687 | None:intergenic | 25.0% |
| !! | AAAATTAATGGAGCAGATTT+TGG | - | tig0020281:102683-102702 | Msa1379710:CDS | 25.0% |
| ! | AACATGGATGATCAAATAAA+AGG | - | tig0020281:102763-102782 | Msa1379710:CDS | 25.0% |
| ! | TGTATATTTATCCCATTACA+AGG | - | tig0020281:102925-102944 | Msa1379710:CDS | 25.0% |
| !!! | TACTAGTTATTTTGGAGAAA+TGG | + | tig0020281:103786-103805 | None:intergenic | 25.0% |
| !! | CTAGATAGTACTAGTTATTT+TGG | + | tig0020281:103794-103813 | None:intergenic | 25.0% |
| TAAAGTTTCCCATCTTGTAT+GGG | + | tig0020281:102186-102205 | None:intergenic | 30.0% | |
| TTAAAGTTTCCCATCTTGTA+TGG | + | tig0020281:102187-102206 | None:intergenic | 30.0% | |
| GAAACTTTAATCTATCTCAC+AGG | - | tig0020281:102197-102216 | Msa1379710:exon | 30.0% | |
| GAATAATATGAAACAGCATG+AGG | + | tig0020281:102386-102405 | None:intergenic | 30.0% | |
| !! | CAATTAATTTTGGCGTTGTT+TGG | + | tig0020281:102637-102656 | None:intergenic | 30.0% |
| CAAACAACGCCAAAATTAAT+TGG | - | tig0020281:102635-102654 | Msa1379710:CDS | 30.0% | |
| ! | GGAATTTGCCCAATTAATTT+TGG | + | tig0020281:102647-102666 | None:intergenic | 30.0% |
| !!! | ACGAGAATGCTTTTTTAACA+TGG | - | tig0020281:102747-102766 | Msa1379710:CDS | 30.0% |
| CCAAAGTTGACAGAAAAATA+TGG | + | tig0020281:102871-102890 | None:intergenic | 30.0% | |
| ! | CCATATTTTTCTGTCAACTT+TGG | - | tig0020281:102868-102887 | Msa1379710:CDS | 30.0% |
| GGATTTCATTTGTGCTTAAT+CGG | + | tig0020281:103137-103156 | None:intergenic | 30.0% | |
| CTTGCTTGATCAATTTCTAA+AGG | - | tig0020281:103245-103264 | Msa1379710:intron | 30.0% | |
| CAATCATTATAATCAGCGAA+AGG | + | tig0020281:103396-103415 | None:intergenic | 30.0% | |
| ATGTAAATACCCAATACTTG+AGG | + | tig0020281:103432-103451 | None:intergenic | 30.0% | |
| !! | TCAAGTATTGGGTATTTACA+TGG | - | tig0020281:103431-103450 | Msa1379710:intron | 30.0% |
| GCTGAATCATTGAATCAATT+GGG | - | tig0020281:103453-103472 | Msa1379710:intron | 30.0% | |
| TTAAATTGTGTAACCATCCT+TGG | + | tig0020281:103504-103523 | None:intergenic | 30.0% | |
| !! | TCAAATCTTTTAGGAAGATC+TGG | + | tig0020281:103684-103703 | None:intergenic | 30.0% |
| ! | ACGTTGAGTTCAAATCTTTT+AGG | + | tig0020281:103693-103712 | None:intergenic | 30.0% |
| TAAAAGATTTGAACTCAACG+TGG | - | tig0020281:103692-103711 | Msa1379710:intron | 30.0% | |
| TATAAAAGGTAGTTGGATCA+GGG | + | tig0020281:103731-103750 | None:intergenic | 30.0% | |
| ATGGATAATCACTATATCCA+AGG | + | tig0020281:103767-103786 | None:intergenic | 30.0% | |
| TAAAGTTTCCCATCTTGTAT+GGG | + | tig0020281:102186-102205 | None:intergenic | 30.0% | |
| TTAAAGTTTCCCATCTTGTA+TGG | + | tig0020281:102187-102206 | None:intergenic | 30.0% | |
| GAAACTTTAATCTATCTCAC+AGG | - | tig0020281:102197-102216 | Msa1379710:exon | 30.0% | |
| GAATAATATGAAACAGCATG+AGG | + | tig0020281:102386-102405 | None:intergenic | 30.0% | |
| !! | CAATTAATTTTGGCGTTGTT+TGG | + | tig0020281:102637-102656 | None:intergenic | 30.0% |
| CAAACAACGCCAAAATTAAT+TGG | - | tig0020281:102635-102654 | Msa1379710:CDS | 30.0% | |
| ! | GGAATTTGCCCAATTAATTT+TGG | + | tig0020281:102647-102666 | None:intergenic | 30.0% |
| !!! | ACGAGAATGCTTTTTTAACA+TGG | - | tig0020281:102747-102766 | Msa1379710:CDS | 30.0% |
| CCAAAGTTGACAGAAAAATA+TGG | + | tig0020281:102871-102890 | None:intergenic | 30.0% | |
| ! | CCATATTTTTCTGTCAACTT+TGG | - | tig0020281:102868-102887 | Msa1379710:CDS | 30.0% |
| GGATTTCATTTGTGCTTAAT+CGG | + | tig0020281:103137-103156 | None:intergenic | 30.0% | |
| CTTGCTTGATCAATTTCTAA+AGG | - | tig0020281:103245-103264 | Msa1379710:intron | 30.0% | |
| CAATCATTATAATCAGCGAA+AGG | + | tig0020281:103396-103415 | None:intergenic | 30.0% | |
| ATGTAAATACCCAATACTTG+AGG | + | tig0020281:103432-103451 | None:intergenic | 30.0% | |
| !! | TCAAGTATTGGGTATTTACA+TGG | - | tig0020281:103431-103450 | Msa1379710:intron | 30.0% |
| GCTGAATCATTGAATCAATT+GGG | - | tig0020281:103453-103472 | Msa1379710:intron | 30.0% | |
| TTAAATTGTGTAACCATCCT+TGG | + | tig0020281:103504-103523 | None:intergenic | 30.0% | |
| !! | TCAAATCTTTTAGGAAGATC+TGG | + | tig0020281:103684-103703 | None:intergenic | 30.0% |
| ! | ACGTTGAGTTCAAATCTTTT+AGG | + | tig0020281:103693-103712 | None:intergenic | 30.0% |
| TAAAAGATTTGAACTCAACG+TGG | - | tig0020281:103692-103711 | Msa1379710:intron | 30.0% | |
| TATAAAAGGTAGTTGGATCA+GGG | + | tig0020281:103731-103750 | None:intergenic | 30.0% | |
| ATGGATAATCACTATATCCA+AGG | + | tig0020281:103767-103786 | None:intergenic | 30.0% | |
| GTGAAGTAAGTAGAGATAGA+AGG | - | tig0020281:102107-102126 | Msa1379710:three_prime_UTR | 35.0% | |
| AGAGATAGAAGGATGACTAA+AGG | - | tig0020281:102118-102137 | Msa1379710:three_prime_UTR | 35.0% | |
| GATGACTAAAGGAGAAGTAA+TGG | - | tig0020281:102129-102148 | Msa1379710:three_prime_UTR | 35.0% | |
| AAAGTTTCCCATCTTGTATG+GGG | + | tig0020281:102185-102204 | None:intergenic | 35.0% | |
| TTAATACGACAGGATAGTGT+TGG | - | tig0020281:102319-102338 | Msa1379710:CDS | 35.0% | |
| ACCATATTTGGATACTCTTC+CGG | + | tig0020281:102898-102917 | None:intergenic | 35.0% | |
| ATACACACACGTACCATATT+TGG | + | tig0020281:102910-102929 | None:intergenic | 35.0% | |
| TTGTTTGTGCATGATATTGG+AGG | + | tig0020281:103054-103073 | None:intergenic | 35.0% | |
| ! | TTGGAGATATCTTTCTGAAG+AGG | + | tig0020281:103078-103097 | None:intergenic | 35.0% |
| TTTGATGGAGTAGAGATACA+TGG | - | tig0020281:103210-103229 | Msa1379710:intron | 35.0% | |
| GGCTGAATCATTGAATCAAT+TGG | - | tig0020281:103452-103471 | Msa1379710:intron | 35.0% | |
| !! | CTATTAGGAAGGTGTTCAAA+GGG | - | tig0020281:103556-103575 | Msa1379710:CDS | 35.0% |
| AAAGGGACATTTATTGTTGC+TGG | - | tig0020281:103573-103592 | Msa1379710:CDS | 35.0% | |
| TATGATAGGAGTGAAGGAAA+TGG | - | tig0020281:103600-103619 | Msa1379710:CDS | 35.0% | |
| GTATAAAAGGTAGTTGGATC+AGG | + | tig0020281:103732-103751 | None:intergenic | 35.0% | |
| TCATGCGTATAAAAGGTAGT+TGG | + | tig0020281:103738-103757 | None:intergenic | 35.0% | |
| TAATCACTATATCCAAGGAC+AGG | + | tig0020281:103762-103781 | None:intergenic | 35.0% | |
| GTGAAGTAAGTAGAGATAGA+AGG | - | tig0020281:102107-102126 | Msa1379710:three_prime_UTR | 35.0% | |
| AGAGATAGAAGGATGACTAA+AGG | - | tig0020281:102118-102137 | Msa1379710:three_prime_UTR | 35.0% | |
| GATGACTAAAGGAGAAGTAA+TGG | - | tig0020281:102129-102148 | Msa1379710:three_prime_UTR | 35.0% | |
| AAAGTTTCCCATCTTGTATG+GGG | + | tig0020281:102185-102204 | None:intergenic | 35.0% | |
| TTAATACGACAGGATAGTGT+TGG | - | tig0020281:102319-102338 | Msa1379710:CDS | 35.0% | |
| ACCATATTTGGATACTCTTC+CGG | + | tig0020281:102898-102917 | None:intergenic | 35.0% | |
| ATACACACACGTACCATATT+TGG | + | tig0020281:102910-102929 | None:intergenic | 35.0% | |
| TTGTTTGTGCATGATATTGG+AGG | + | tig0020281:103054-103073 | None:intergenic | 35.0% | |
| ! | TTGGAGATATCTTTCTGAAG+AGG | + | tig0020281:103078-103097 | None:intergenic | 35.0% |
| TTTGATGGAGTAGAGATACA+TGG | - | tig0020281:103210-103229 | Msa1379710:intron | 35.0% | |
| GGCTGAATCATTGAATCAAT+TGG | - | tig0020281:103452-103471 | Msa1379710:intron | 35.0% | |
| !! | CTATTAGGAAGGTGTTCAAA+GGG | - | tig0020281:103556-103575 | Msa1379710:CDS | 35.0% |
| AAAGGGACATTTATTGTTGC+TGG | - | tig0020281:103573-103592 | Msa1379710:CDS | 35.0% | |
| TATGATAGGAGTGAAGGAAA+TGG | - | tig0020281:103600-103619 | Msa1379710:CDS | 35.0% | |
| GTATAAAAGGTAGTTGGATC+AGG | + | tig0020281:103732-103751 | None:intergenic | 35.0% | |
| TCATGCGTATAAAAGGTAGT+TGG | + | tig0020281:103738-103757 | None:intergenic | 35.0% | |
| TAATCACTATATCCAAGGAC+AGG | + | tig0020281:103762-103781 | None:intergenic | 35.0% | |
| AAAGGAGAAGTAATGGTCGA+TGG | - | tig0020281:102136-102155 | Msa1379710:three_prime_UTR | 40.0% | |
| TATGACCTTGATCGCGTTAA+CGG | + | tig0020281:102347-102366 | None:intergenic | 40.0% | |
| TCTCAAAGATCAACTAAGGG+TGG | - | tig0020281:102404-102423 | Msa1379710:CDS | 40.0% | |
| !! | TGGCTCCTTTTTCATGAACT+TGG | + | tig0020281:102851-102870 | None:intergenic | 40.0% |
| GATATTGGAGGTTTACCTTC+AGG | + | tig0020281:103042-103061 | None:intergenic | 40.0% | |
| ! | GGCTTGTTTGTGCATGATAT+TGG | + | tig0020281:103057-103076 | None:intergenic | 40.0% |
| TGAAGTCATTGACAAGCATG+TGG | + | tig0020281:103158-103177 | None:intergenic | 40.0% | |
| AATTGCTGCAAGAAATGCCA+TGG | - | tig0020281:103179-103198 | Msa1379710:CDS | 40.0% | |
| GTAGAGATACATGGAGCTAA+TGG | - | tig0020281:103219-103238 | Msa1379710:intron | 40.0% | |
| AGACTCTGATCCTCAAGTAT+TGG | - | tig0020281:103419-103438 | Msa1379710:intron | 40.0% | |
| GACTCTGATCCTCAAGTATT+GGG | - | tig0020281:103420-103439 | Msa1379710:intron | 40.0% | |
| ACTGTCATATGATTGAGCCA+AGG | - | tig0020281:103484-103503 | Msa1379710:intron | 40.0% | |
| TCATATGATTGAGCCAAGGA+TGG | - | tig0020281:103488-103507 | Msa1379710:intron | 40.0% | |
| AATAGGCATCAAGGACCATT+TGG | + | tig0020281:103541-103560 | None:intergenic | 40.0% | |
| AATGGTCCTTGATGCCTATT+AGG | - | tig0020281:103541-103560 | Msa1379710:CDS | 40.0% | |
| CCTTTGAACACCTTCCTAAT+AGG | + | tig0020281:103558-103577 | None:intergenic | 40.0% | |
| !! | CCTATTAGGAAGGTGTTCAA+AGG | - | tig0020281:103555-103574 | Msa1379710:CDS | 40.0% |
| TTGTTGCTGGAGGTTATGAT+AGG | - | tig0020281:103586-103605 | Msa1379710:CDS | 40.0% | |
| GACAGGATCATGCGTATAAA+AGG | + | tig0020281:103745-103764 | None:intergenic | 40.0% | |
| AAAGGAGAAGTAATGGTCGA+TGG | - | tig0020281:102136-102155 | Msa1379710:three_prime_UTR | 40.0% | |
| TATGACCTTGATCGCGTTAA+CGG | + | tig0020281:102347-102366 | None:intergenic | 40.0% | |
| TCTCAAAGATCAACTAAGGG+TGG | - | tig0020281:102404-102423 | Msa1379710:CDS | 40.0% | |
| !! | TGGCTCCTTTTTCATGAACT+TGG | + | tig0020281:102851-102870 | None:intergenic | 40.0% |
| GATATTGGAGGTTTACCTTC+AGG | + | tig0020281:103042-103061 | None:intergenic | 40.0% | |
| ! | GGCTTGTTTGTGCATGATAT+TGG | + | tig0020281:103057-103076 | None:intergenic | 40.0% |
| TGAAGTCATTGACAAGCATG+TGG | + | tig0020281:103158-103177 | None:intergenic | 40.0% | |
| AATTGCTGCAAGAAATGCCA+TGG | - | tig0020281:103179-103198 | Msa1379710:CDS | 40.0% | |
| GTAGAGATACATGGAGCTAA+TGG | - | tig0020281:103219-103238 | Msa1379710:intron | 40.0% | |
| AGACTCTGATCCTCAAGTAT+TGG | - | tig0020281:103419-103438 | Msa1379710:intron | 40.0% | |
| GACTCTGATCCTCAAGTATT+GGG | - | tig0020281:103420-103439 | Msa1379710:intron | 40.0% | |
| ACTGTCATATGATTGAGCCA+AGG | - | tig0020281:103484-103503 | Msa1379710:intron | 40.0% | |
| TCATATGATTGAGCCAAGGA+TGG | - | tig0020281:103488-103507 | Msa1379710:intron | 40.0% | |
| AATAGGCATCAAGGACCATT+TGG | + | tig0020281:103541-103560 | None:intergenic | 40.0% | |
| AATGGTCCTTGATGCCTATT+AGG | - | tig0020281:103541-103560 | Msa1379710:CDS | 40.0% | |
| CCTTTGAACACCTTCCTAAT+AGG | + | tig0020281:103558-103577 | None:intergenic | 40.0% | |
| !! | CCTATTAGGAAGGTGTTCAA+AGG | - | tig0020281:103555-103574 | Msa1379710:CDS | 40.0% |
| TTGTTGCTGGAGGTTATGAT+AGG | - | tig0020281:103586-103605 | Msa1379710:CDS | 40.0% | |
| GACAGGATCATGCGTATAAA+AGG | + | tig0020281:103745-103764 | None:intergenic | 40.0% | |
| ACTAAGGGTGGCTTCTTGAT+TGG | - | tig0020281:102416-102435 | Msa1379710:CDS | 45.0% | |
| CTAAGGGTGGCTTCTTGATT+GGG | - | tig0020281:102417-102436 | Msa1379710:CDS | 45.0% | |
| TAAGGGTGGCTTCTTGATTG+GGG | - | tig0020281:102418-102437 | Msa1379710:CDS | 45.0% | |
| !! | TTCTTGATTGGGGAAGCATC+TGG | - | tig0020281:102428-102447 | Msa1379710:CDS | 45.0% |
| GTGTGTCTAACACAGCACAA+GGG | - | tig0020281:102450-102469 | Msa1379710:CDS | 45.0% | |
| !! | AAAAGGTACCCAAATACGCC+TGG | - | tig0020281:102780-102799 | Msa1379710:CDS | 45.0% |
| TCCAAATGCCAGGCGTATTT+GGG | + | tig0020281:102791-102810 | None:intergenic | 45.0% | |
| TCATGAACTTGGCGCACAAT+TGG | + | tig0020281:102840-102859 | None:intergenic | 45.0% | |
| GTGCGCCAAGTTCATGAAAA+AGG | - | tig0020281:102843-102862 | Msa1379710:CDS | 45.0% | |
| !! | GCCGGAAGAGTATCCAAATA+TGG | - | tig0020281:102894-102913 | Msa1379710:CDS | 45.0% |
| GATGTAGTATACCAGCCTGA+AGG | - | tig0020281:103024-103043 | Msa1379710:intron | 45.0% | |
| ATTAGCTGCAGCAGGATCAT+TGG | + | tig0020281:103097-103116 | None:intergenic | 45.0% | |
| ! | GGATATTGATTAGCTGCAGC+AGG | + | tig0020281:103105-103124 | None:intergenic | 45.0% |
| TCATTTGTGCTTAATCGGCG+AGG | + | tig0020281:103132-103151 | None:intergenic | 45.0% | |
| TCCATCAAAACCTGCTTCCA+TGG | + | tig0020281:103199-103218 | None:intergenic | 45.0% | |
| AACGACAGAGATGACGAGTA+TGG | - | tig0020281:103276-103295 | Msa1379710:intron | 45.0% | |
| AAGGCAGTAGCTGATGAGAT+CGG | - | tig0020281:103342-103361 | Msa1379710:intron | 45.0% | |
| ACAAGTGTGACACCACCAAA+TGG | - | tig0020281:103523-103542 | Msa1379710:intron | 45.0% | |
| GTCCTTGATGCCTATTAGGA+AGG | - | tig0020281:103545-103564 | Msa1379710:CDS | 45.0% | |
| CACCTTCCTAATAGGCATCA+AGG | + | tig0020281:103550-103569 | None:intergenic | 45.0% | |
| GGGACATTTATTGTTGCTGG+AGG | - | tig0020281:103576-103595 | Msa1379710:CDS | 45.0% | |
| GGAGGTTATGATAGGAGTGA+AGG | - | tig0020281:103594-103613 | Msa1379710:CDS | 45.0% | |
| !! | GGAAATGGTGCTATAGCATG+TGG | - | tig0020281:103615-103634 | Msa1379710:CDS | 45.0% |
| ! | GGCTTATGGACGTCTCTTTT+TGG | - | tig0020281:103653-103672 | Msa1379710:CDS | 45.0% |
| AAAAGGTAGTTGGATCAGGG+TGG | + | tig0020281:103728-103747 | None:intergenic | 45.0% | |
| TATACGCATGATCCTGTCCT+TGG | - | tig0020281:103747-103766 | Msa1379710:intron | 45.0% | |
| ACTAAGGGTGGCTTCTTGAT+TGG | - | tig0020281:102416-102435 | Msa1379710:CDS | 45.0% | |
| CTAAGGGTGGCTTCTTGATT+GGG | - | tig0020281:102417-102436 | Msa1379710:CDS | 45.0% | |
| TAAGGGTGGCTTCTTGATTG+GGG | - | tig0020281:102418-102437 | Msa1379710:CDS | 45.0% | |
| !! | TTCTTGATTGGGGAAGCATC+TGG | - | tig0020281:102428-102447 | Msa1379710:CDS | 45.0% |
| GTGTGTCTAACACAGCACAA+GGG | - | tig0020281:102450-102469 | Msa1379710:CDS | 45.0% | |
| !! | AAAAGGTACCCAAATACGCC+TGG | - | tig0020281:102780-102799 | Msa1379710:CDS | 45.0% |
| TCCAAATGCCAGGCGTATTT+GGG | + | tig0020281:102791-102810 | None:intergenic | 45.0% | |
| TCATGAACTTGGCGCACAAT+TGG | + | tig0020281:102840-102859 | None:intergenic | 45.0% | |
| GTGCGCCAAGTTCATGAAAA+AGG | - | tig0020281:102843-102862 | Msa1379710:CDS | 45.0% | |
| !! | GCCGGAAGAGTATCCAAATA+TGG | - | tig0020281:102894-102913 | Msa1379710:CDS | 45.0% |
| GATGTAGTATACCAGCCTGA+AGG | - | tig0020281:103024-103043 | Msa1379710:intron | 45.0% | |
| ATTAGCTGCAGCAGGATCAT+TGG | + | tig0020281:103097-103116 | None:intergenic | 45.0% | |
| ! | GGATATTGATTAGCTGCAGC+AGG | + | tig0020281:103105-103124 | None:intergenic | 45.0% |
| TCATTTGTGCTTAATCGGCG+AGG | + | tig0020281:103132-103151 | None:intergenic | 45.0% | |
| TCCATCAAAACCTGCTTCCA+TGG | + | tig0020281:103199-103218 | None:intergenic | 45.0% | |
| AACGACAGAGATGACGAGTA+TGG | - | tig0020281:103276-103295 | Msa1379710:intron | 45.0% | |
| AAGGCAGTAGCTGATGAGAT+CGG | - | tig0020281:103342-103361 | Msa1379710:intron | 45.0% | |
| ACAAGTGTGACACCACCAAA+TGG | - | tig0020281:103523-103542 | Msa1379710:intron | 45.0% | |
| GTCCTTGATGCCTATTAGGA+AGG | - | tig0020281:103545-103564 | Msa1379710:CDS | 45.0% | |
| CACCTTCCTAATAGGCATCA+AGG | + | tig0020281:103550-103569 | None:intergenic | 45.0% | |
| GGGACATTTATTGTTGCTGG+AGG | - | tig0020281:103576-103595 | Msa1379710:CDS | 45.0% | |
| GGAGGTTATGATAGGAGTGA+AGG | - | tig0020281:103594-103613 | Msa1379710:CDS | 45.0% | |
| !! | GGAAATGGTGCTATAGCATG+TGG | - | tig0020281:103615-103634 | Msa1379710:CDS | 45.0% |
| ! | GGCTTATGGACGTCTCTTTT+TGG | - | tig0020281:103653-103672 | Msa1379710:CDS | 45.0% |
| AAAAGGTAGTTGGATCAGGG+TGG | + | tig0020281:103728-103747 | None:intergenic | 45.0% | |
| TATACGCATGATCCTGTCCT+TGG | - | tig0020281:103747-103766 | Msa1379710:intron | 45.0% | |
| ATCTTGTATGGGGTGAGCAG+GGG | + | tig0020281:102175-102194 | None:intergenic | 50.0% | |
| CATCTTGTATGGGGTGAGCA+GGG | + | tig0020281:102176-102195 | None:intergenic | 50.0% | |
| CTGCTCACCCCATACAAGAT+GGG | - | tig0020281:102175-102194 | Msa1379710:three_prime_UTR | 50.0% | |
| GGTGTGTCTAACACAGCACA+AGG | - | tig0020281:102449-102468 | Msa1379710:CDS | 50.0% | |
| ACCCAAATACGCCTGGCATT+TGG | - | tig0020281:102787-102806 | Msa1379710:CDS | 50.0% | |
| GTCCAAATGCCAGGCGTATT+TGG | + | tig0020281:102792-102811 | None:intergenic | 50.0% | |
| ATACGCCTGGCATTTGGACA+AGG | - | tig0020281:102793-102812 | Msa1379710:CDS | 50.0% | |
| TACGCCTGGCATTTGGACAA+GGG | - | tig0020281:102794-102813 | Msa1379710:CDS | 50.0% | |
| TGTTCCCTTGTCCAAATGCC+AGG | + | tig0020281:102801-102820 | None:intergenic | 50.0% | |
| TGGCATTTGGACAAGGGAAC+AGG | - | tig0020281:102800-102819 | Msa1379710:CDS | 50.0% | |
| TTGGACAAGGGAACAGGTAG+AGG | - | tig0020281:102806-102825 | Msa1379710:CDS | 50.0% | |
| TTCTGTCAACTTTGGCACGC+CGG | - | tig0020281:102876-102895 | Msa1379710:CDS | 50.0% | |
| TTGGAGGTTTACCTTCAGGC+TGG | + | tig0020281:103038-103057 | None:intergenic | 50.0% | |
| TTTGTGCTTAATCGGCGAGG+AGG | + | tig0020281:103129-103148 | None:intergenic | 50.0% | |
| GCAAGAAATGCCATGGAAGC+AGG | - | tig0020281:103186-103205 | Msa1379710:CDS | 50.0% | |
| !! | GCCATGGAAGCAGGTTTTGA+TGG | - | tig0020281:103195-103214 | Msa1379710:CDS | 50.0% |
| GACAGAGATGACGAGTATGG+AGG | - | tig0020281:103279-103298 | Msa1379710:intron | 50.0% | |
| TGATGAGATCGGAGCTGACA+AGG | - | tig0020281:103353-103372 | Msa1379710:intron | 50.0% | |
| AGGCATCAAGGACCATTTGG+TGG | + | tig0020281:103538-103557 | None:intergenic | 50.0% | |
| !! | ATGTGGTGCTGCTGATCTAG+TGG | - | tig0020281:103632-103651 | Msa1379710:CDS | 50.0% |
| GCTGCTGATCTAGTGGCTTA+TGG | - | tig0020281:103639-103658 | Msa1379710:CDS | 50.0% | |
| ATCTTGTATGGGGTGAGCAG+GGG | + | tig0020281:102175-102194 | None:intergenic | 50.0% | |
| CATCTTGTATGGGGTGAGCA+GGG | + | tig0020281:102176-102195 | None:intergenic | 50.0% | |
| CTGCTCACCCCATACAAGAT+GGG | - | tig0020281:102175-102194 | Msa1379710:three_prime_UTR | 50.0% | |
| GGTGTGTCTAACACAGCACA+AGG | - | tig0020281:102449-102468 | Msa1379710:CDS | 50.0% | |
| ACCCAAATACGCCTGGCATT+TGG | - | tig0020281:102787-102806 | Msa1379710:CDS | 50.0% | |
| GTCCAAATGCCAGGCGTATT+TGG | + | tig0020281:102792-102811 | None:intergenic | 50.0% | |
| ATACGCCTGGCATTTGGACA+AGG | - | tig0020281:102793-102812 | Msa1379710:CDS | 50.0% | |
| TACGCCTGGCATTTGGACAA+GGG | - | tig0020281:102794-102813 | Msa1379710:CDS | 50.0% | |
| TGTTCCCTTGTCCAAATGCC+AGG | + | tig0020281:102801-102820 | None:intergenic | 50.0% | |
| TGGCATTTGGACAAGGGAAC+AGG | - | tig0020281:102800-102819 | Msa1379710:CDS | 50.0% | |
| TTGGACAAGGGAACAGGTAG+AGG | - | tig0020281:102806-102825 | Msa1379710:CDS | 50.0% | |
| TTCTGTCAACTTTGGCACGC+CGG | - | tig0020281:102876-102895 | Msa1379710:CDS | 50.0% | |
| TTGGAGGTTTACCTTCAGGC+TGG | + | tig0020281:103038-103057 | None:intergenic | 50.0% | |
| TTTGTGCTTAATCGGCGAGG+AGG | + | tig0020281:103129-103148 | None:intergenic | 50.0% | |
| GCAAGAAATGCCATGGAAGC+AGG | - | tig0020281:103186-103205 | Msa1379710:CDS | 50.0% | |
| !! | GCCATGGAAGCAGGTTTTGA+TGG | - | tig0020281:103195-103214 | Msa1379710:CDS | 50.0% |
| GACAGAGATGACGAGTATGG+AGG | - | tig0020281:103279-103298 | Msa1379710:intron | 50.0% | |
| TGATGAGATCGGAGCTGACA+AGG | - | tig0020281:103353-103372 | Msa1379710:intron | 50.0% | |
| AGGCATCAAGGACCATTTGG+TGG | + | tig0020281:103538-103557 | None:intergenic | 50.0% | |
| !! | ATGTGGTGCTGCTGATCTAG+TGG | - | tig0020281:103632-103651 | Msa1379710:CDS | 50.0% |
| GCTGCTGATCTAGTGGCTTA+TGG | - | tig0020281:103639-103658 | Msa1379710:CDS | 50.0% | |
| CCATCTTGTATGGGGTGAGC+AGG | + | tig0020281:102177-102196 | None:intergenic | 55.0% | |
| CCTGCTCACCCCATACAAGA+TGG | - | tig0020281:102174-102193 | Msa1379710:three_prime_UTR | 55.0% | |
| CAAGGGAACAGGTAGAGGCA+TGG | - | tig0020281:102811-102830 | Msa1379710:CDS | 55.0% | |
| ! | TTGTCGCTTCCCACTTCGAG+TGG | - | tig0020281:103317-103336 | Msa1379710:intron | 55.0% |
| CTTCCCACTTCGAGTGGTGA+AGG | - | tig0020281:103323-103342 | Msa1379710:intron | 55.0% | |
| CTGCCTTCACCACTCGAAGT+GGG | + | tig0020281:103329-103348 | None:intergenic | 55.0% | |
| ACTGCCTTCACCACTCGAAG+TGG | + | tig0020281:103330-103349 | None:intergenic | 55.0% | |
| GAGATCGGAGCTGACAAGGT+TGG | - | tig0020281:103357-103376 | Msa1379710:intron | 55.0% | |
| !! | GAGCTGACAAGGTTGGTGTG+AGG | - | tig0020281:103364-103383 | Msa1379710:intron | 55.0% |
| CCATCTTGTATGGGGTGAGC+AGG | + | tig0020281:102177-102196 | None:intergenic | 55.0% | |
| CCTGCTCACCCCATACAAGA+TGG | - | tig0020281:102174-102193 | Msa1379710:three_prime_UTR | 55.0% | |
| CAAGGGAACAGGTAGAGGCA+TGG | - | tig0020281:102811-102830 | Msa1379710:CDS | 55.0% | |
| ! | TTGTCGCTTCCCACTTCGAG+TGG | - | tig0020281:103317-103336 | Msa1379710:intron | 55.0% |
| CTTCCCACTTCGAGTGGTGA+AGG | - | tig0020281:103323-103342 | Msa1379710:intron | 55.0% | |
| CTGCCTTCACCACTCGAAGT+GGG | + | tig0020281:103329-103348 | None:intergenic | 55.0% | |
| ACTGCCTTCACCACTCGAAG+TGG | + | tig0020281:103330-103349 | None:intergenic | 55.0% | |
| GAGATCGGAGCTGACAAGGT+TGG | - | tig0020281:103357-103376 | Msa1379710:intron | 55.0% | |
| !! | GAGCTGACAAGGTTGGTGTG+AGG | - | tig0020281:103364-103383 | Msa1379710:intron | 55.0% |
| TGGCGCCGTTAACGCGATCA+AGG | - | tig0020281:102339-102358 | Msa1379710:CDS | 60.0% | |
| GTGCTTAATCGGCGAGGAGG+TGG | + | tig0020281:103126-103145 | None:intergenic | 60.0% | |
| TGGCGCCGTTAACGCGATCA+AGG | - | tig0020281:102339-102358 | Msa1379710:CDS | 60.0% | |
| GTGCTTAATCGGCGAGGAGG+TGG | + | tig0020281:103126-103145 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0020281 | gene | 102099 | 103909 | 102099 | ID=Msa1379710;Name=Msa1379710 |
| tig0020281 | mRNA | 102099 | 103909 | 102099 | ID=Msa1379710-mRNA-1;Parent=Msa1379710;Name=Msa1379710-mRNA-1;_AED=0.00;_eAED=0.00;_QI=31|1|1|1|1|0.75|4|106|377 |
| tig0020281 | exon | 102099 | 102977 | 102099 | ID=Msa1379710-mRNA-1:exon:6717;Parent=Msa1379710-mRNA-1 |
| tig0020281 | exon | 103093 | 103223 | 103093 | ID=Msa1379710-mRNA-1:exon:6716;Parent=Msa1379710-mRNA-1 |
| tig0020281 | exon | 103537 | 103677 | 103537 | ID=Msa1379710-mRNA-1:exon:6715;Parent=Msa1379710-mRNA-1 |
| tig0020281 | exon | 103790 | 103909 | 103790 | ID=Msa1379710-mRNA-1:exon:6714;Parent=Msa1379710-mRNA-1 |
| tig0020281 | five_prime_UTR | 103879 | 103909 | 103879 | ID=Msa1379710-mRNA-1:five_prime_utr;Parent=Msa1379710-mRNA-1 |
| tig0020281 | CDS | 103790 | 103878 | 103790 | ID=Msa1379710-mRNA-1:cds;Parent=Msa1379710-mRNA-1 |
| tig0020281 | CDS | 103537 | 103677 | 103537 | ID=Msa1379710-mRNA-1:cds;Parent=Msa1379710-mRNA-1 |
| tig0020281 | CDS | 103093 | 103223 | 103093 | ID=Msa1379710-mRNA-1:cds;Parent=Msa1379710-mRNA-1 |
| tig0020281 | CDS | 102205 | 102977 | 102205 | ID=Msa1379710-mRNA-1:cds;Parent=Msa1379710-mRNA-1 |
| tig0020281 | three_prime_UTR | 102099 | 102204 | 102099 | ID=Msa1379710-mRNA-1:three_prime_utr;Parent=Msa1379710-mRNA-1 |
| Gene Sequence |
| Protein sequence |
