Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0709630 | XP_024631663.1 | 95.157 | 413 | 13 | 2 | 1 | 413 | 1 | 406 | 0.0 | 796 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0709630 | sp|Q9CAI2|IQD8_ARATH | 46.934 | 424 | 167 | 17 | 1 | 395 | 1 | 395 | 1.02e-90 | 283 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0709630 | A0A396JDB1 | 95.157 | 413 | 13 | 2 | 1 | 413 | 1 | 406 | 0.0 | 796 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002580 | Msa0709630 | 0.806932 | 6.468310e-50 | -8.615850e-47 |
| Msa0003080 | Msa0709630 | 0.800537 | 1.375652e-48 | -8.615850e-47 |
| Msa0016040 | Msa0709630 | 0.826797 | 2.227723e-54 | -8.615850e-47 |
| Msa0017670 | Msa0709630 | 0.812301 | 4.542111e-51 | -8.615850e-47 |
| Msa0019900 | Msa0709630 | 0.802224 | 6.210228e-49 | -8.615850e-47 |
| Msa0025160 | Msa0709630 | 0.800811 | 1.209933e-48 | -8.615850e-47 |
| Msa0038940 | Msa0709630 | 0.838042 | 3.637848e-57 | -8.615850e-47 |
| Msa0042640 | Msa0709630 | 0.824024 | 1.009704e-53 | -8.615850e-47 |
| Msa0048510 | Msa0709630 | 0.846040 | 2.787435e-59 | -8.615850e-47 |
| Msa0049760 | Msa0709630 | 0.809546 | 1.794105e-50 | -8.615850e-47 |
| Msa0050660 | Msa0709630 | 0.809756 | 1.616847e-50 | -8.615850e-47 |
| Msa0050700 | Msa0709630 | 0.806160 | 9.411517e-50 | -8.615850e-47 |
| Msa0050790 | Msa0709630 | 0.811707 | 6.118730e-51 | -8.615850e-47 |
| Msa0054690 | Msa0709630 | 0.808689 | 2.738029e-50 | -8.615850e-47 |
| Msa0056180 | Msa0709630 | 0.801427 | 9.049295e-49 | -8.615850e-47 |
| Msa0062340 | Msa0709630 | 0.810681 | 1.021623e-50 | -8.615850e-47 |
| Msa0067330 | Msa0709630 | 0.817897 | 2.597828e-52 | -8.615850e-47 |
| Msa0075530 | Msa0709630 | 0.802000 | 6.904424e-49 | -8.615850e-47 |
| Msa0077340 | Msa0709630 | 0.822689 | 2.070906e-53 | -8.615850e-47 |
| Msa0077560 | Msa0709630 | 0.871067 | 9.059957e-67 | -8.615850e-47 |
| Msa0081980 | Msa0709630 | 0.836852 | 7.338974e-57 | -8.615850e-47 |
| Msa0082020 | Msa0709630 | 0.834128 | 3.584525e-56 | -8.615850e-47 |
| Msa0094780 | Msa0709630 | 0.855523 | 5.957937e-62 | -8.615850e-47 |
| Msa0094790 | Msa0709630 | 0.804995 | 1.652985e-49 | -8.615850e-47 |
| Msa0098520 | Msa0709630 | 0.817554 | 3.104389e-52 | -8.615850e-47 |
| Msa0606100 | Msa0709630 | 0.805601 | 1.233833e-49 | -8.615850e-47 |
| Msa0607800 | Msa0709630 | 0.824840 | 6.489592e-54 | -8.615850e-47 |
| Msa0615630 | Msa0709630 | 0.801672 | 8.062401e-49 | -8.615850e-47 |
| Msa0621710 | Msa0709630 | 0.843516 | 1.335671e-58 | -8.615850e-47 |
| Msa0624900 | Msa0709630 | 0.836368 | 9.752150e-57 | -8.615850e-47 |
| Msa0641990 | Msa0709630 | 0.819477 | 1.138068e-52 | -8.615850e-47 |
| Msa0648040 | Msa0709630 | 0.806082 | 9.773946e-50 | -8.615850e-47 |
| Msa0657700 | Msa0709630 | 0.814678 | 1.363058e-51 | -8.615850e-47 |
| Msa0658640 | Msa0709630 | 0.842878 | 1.975260e-58 | -8.615850e-47 |
| Msa0661150 | Msa0709630 | 0.811122 | 8.196553e-51 | -8.615850e-47 |
| Msa0666700 | Msa0709630 | 0.854222 | 1.421434e-61 | -8.615850e-47 |
| Msa0702810 | Msa0709630 | 0.844441 | 7.545603e-59 | -8.615850e-47 |
| Msa0703600 | Msa0709630 | 0.846403 | 2.219654e-59 | -8.615850e-47 |
| Msa0709200 | Msa0709630 | 0.846900 | 1.624122e-59 | -8.615850e-47 |
| Msa0709440 | Msa0709630 | 0.877686 | 5.150059e-69 | -8.615850e-47 |
| Msa0709630 | Msa0711400 | 0.807649 | 4.560135e-50 | -8.615850e-47 |
| Msa0709630 | Msa0714790 | 0.836771 | 7.696398e-57 | -8.615850e-47 |
| Msa0709630 | Msa0716890 | 0.800905 | 1.157475e-48 | -8.615850e-47 |
| Msa0709630 | Msa0722220 | 0.807576 | 4.725589e-50 | -8.615850e-47 |
| Msa0709630 | Msa0735780 | 0.861430 | 1.031696e-63 | -8.615850e-47 |
| Msa0709630 | Msa0738700 | 0.810890 | 9.203637e-51 | -8.615850e-47 |
| Msa0709630 | Msa0743440 | 0.841360 | 4.982343e-58 | -8.615850e-47 |
| Msa0709630 | Msa0745720 | 0.821722 | 3.471137e-53 | -8.615850e-47 |
| Msa0709630 | Msa0754430 | 0.829243 | 5.739087e-55 | -8.615850e-47 |
| Msa0709630 | Msa0754450 | 0.824582 | 7.464527e-54 | -8.615850e-47 |
| Msa0709630 | Msa0755760 | 0.835587 | 1.538590e-56 | -8.615850e-47 |
| Msa0709630 | Msa0756820 | 0.829167 | 5.987785e-55 | -8.615850e-47 |
| Msa0709630 | Msa0758650 | 0.807000 | 6.258940e-50 | -8.615850e-47 |
| Msa0709630 | Msa0761670 | 0.837177 | 6.062517e-57 | -8.615850e-47 |
| Msa0709630 | Msa0773630 | 0.854849 | 9.360277e-62 | -8.615850e-47 |
| Msa0709630 | Msa0777750 | 0.828081 | 1.095756e-54 | -8.615850e-47 |
| Msa0709630 | Msa0780910 | 0.837963 | 3.811434e-57 | -8.615850e-47 |
| Msa0709630 | Msa0795870 | 0.854693 | 1.038410e-61 | -8.615850e-47 |
| Msa0709630 | Msa0805680 | 0.815710 | 8.040799e-52 | -8.615850e-47 |
| Msa0709630 | Msa0811020 | 0.820435 | 6.870187e-53 | -8.615850e-47 |
| Msa0709630 | Msa0818130 | 0.804631 | 1.968832e-49 | -8.615850e-47 |
| Msa0709630 | Msa0818880 | 0.819999 | 8.645216e-53 | -8.615850e-47 |
| Msa0709630 | Msa0821160 | 0.824840 | 6.490351e-54 | -8.615850e-47 |
| Msa0709630 | Msa0824450 | 0.846846 | 1.680388e-59 | -8.615850e-47 |
| Msa0709630 | Msa0828970 | 0.846177 | 2.558124e-59 | -8.615850e-47 |
| Msa0709630 | Msa0833650 | 0.858317 | 8.952135e-63 | -8.615850e-47 |
| Msa0709630 | Msa0835900 | 0.815694 | 8.108613e-52 | -8.615850e-47 |
| Msa0709630 | Msa0836150 | 0.807998 | 3.843073e-50 | -8.615850e-47 |
| Msa0709630 | Msa0837460 | 0.801054 | 1.079205e-48 | -8.615850e-47 |
| Msa0709630 | Msa0842070 | 0.802492 | 5.469436e-49 | -8.615850e-47 |
| Msa0709630 | Msa0855230 | 0.832754 | 7.894073e-56 | -8.615850e-47 |
| Msa0709630 | Msa0863620 | 0.856643 | 2.801315e-62 | -8.615850e-47 |
| Msa0709630 | Msa0867110 | 0.824170 | 9.331936e-54 | -8.615850e-47 |
| Msa0709630 | Msa0878280 | 0.837676 | 4.516992e-57 | -8.615850e-47 |
| Msa0709630 | Msa0888790 | 0.825830 | 3.785546e-54 | -8.615850e-47 |
| Msa0709630 | Msa0915520 | 0.809215 | 2.112146e-50 | -8.615850e-47 |
| Msa0709630 | Msa0931590 | 0.838676 | 2.496255e-57 | -8.615850e-47 |
| Msa0709630 | Msa0966320 | 0.820004 | 8.623697e-53 | -8.615850e-47 |
| Msa0709630 | Msa0966480 | 0.809401 | 1.926972e-50 | -8.615850e-47 |
| Msa0709630 | Msa0989370 | 0.807573 | 4.730946e-50 | -8.615850e-47 |
| Msa0709630 | Msa0994520 | 0.803650 | 3.150100e-49 | -8.615850e-47 |
| Msa0709630 | Msa1035610 | 0.802808 | 4.706036e-49 | -8.615850e-47 |
| Msa0709630 | Msa1037540 | 0.834250 | 3.340618e-56 | -8.615850e-47 |
| Msa0709630 | Msa1042160 | 0.815577 | 8.609629e-52 | -8.615850e-47 |
| Msa0709630 | Msa1042190 | 0.820500 | 6.636467e-53 | -8.615850e-47 |
| Msa0709630 | Msa1042880 | 0.826518 | 2.596378e-54 | -8.615850e-47 |
| Msa0709630 | Msa1072940 | 0.811799 | 5.843268e-51 | -8.615850e-47 |
| Msa0709630 | Msa1081390 | 0.808555 | 2.923537e-50 | -8.615850e-47 |
| Msa0709630 | Msa1082200 | 0.818356 | 2.045404e-52 | -8.615850e-47 |
| Msa0709630 | Msa1084530 | 0.880934 | 3.644804e-70 | -8.615850e-47 |
| Msa0709630 | Msa1092420 | 0.801152 | 1.030173e-48 | -8.615850e-47 |
| Msa0709630 | Msa1101160 | 0.802094 | 6.602119e-49 | -8.615850e-47 |
| Msa0709630 | Msa1114630 | 0.818618 | 1.784237e-52 | -8.615850e-47 |
| Msa0709630 | Msa1116220 | 0.812365 | 4.398276e-51 | -8.615850e-47 |
| Msa0709630 | Msa1116660 | 0.803652 | 3.147074e-49 | -8.615850e-47 |
| Msa0709630 | Msa1125820 | 0.878682 | 2.305613e-69 | -8.615850e-47 |
| Msa0709630 | Msa1125990 | 0.880171 | 6.835346e-70 | -8.615850e-47 |
| Msa0709630 | Msa1127470 | 0.823161 | 1.607221e-53 | -8.615850e-47 |
| Msa0709630 | Msa1130420 | 0.803109 | 4.077068e-49 | -8.615850e-47 |
| Msa0709630 | Msa1132530 | 0.836638 | 8.324188e-57 | -8.615850e-47 |
| Msa0709630 | Msa1132840 | 0.856116 | 3.998829e-62 | -8.615850e-47 |
| Msa0709630 | Msa1159590 | 0.806219 | 9.147725e-50 | -8.615850e-47 |
| Msa0709630 | Msa1160920 | 0.823241 | 1.539661e-53 | -8.615850e-47 |
| Msa0709630 | Msa1167470 | 0.816559 | 5.195497e-52 | -8.615850e-47 |
| Msa0709630 | Msa1171290 | 0.878912 | 1.911638e-69 | -8.615850e-47 |
| Msa0709630 | Msa1192570 | 0.867470 | 1.336461e-65 | -8.615850e-47 |
| Msa0709630 | Msa1208950 | 0.856824 | 2.477596e-62 | -8.615850e-47 |
| Msa0709630 | Msa1214350 | 0.820312 | 7.330752e-53 | -8.615850e-47 |
| Msa0709630 | Msa1215870 | 0.866744 | 2.279798e-65 | -8.615850e-47 |
| Msa0709630 | Msa1218820 | 0.825880 | 3.682318e-54 | -8.615850e-47 |
| Msa0709630 | Msa1226520 | 0.839512 | 1.516324e-57 | -8.615850e-47 |
| Msa0709630 | Msa1240260 | 0.822018 | 2.964990e-53 | -8.615850e-47 |
| Msa0709630 | Msa1244240 | 0.822021 | 2.960521e-53 | -8.615850e-47 |
| Msa0709630 | Msa1254540 | 0.830693 | 2.544015e-55 | -8.615850e-47 |
| Msa0709630 | Msa1263780 | 0.829812 | 4.174777e-55 | -8.615850e-47 |
| Msa0709630 | Msa1265650 | 0.806678 | 7.320820e-50 | -8.615850e-47 |
| Msa0709630 | Msa1300460 | 0.811998 | 5.288132e-51 | -8.615850e-47 |
| Msa0709630 | Msa1303560 | 0.822155 | 2.755994e-53 | -8.615850e-47 |
| Msa0709630 | Msa1303650 | 0.822038 | 2.933040e-53 | -8.615850e-47 |
| Msa0709630 | Msa1307630 | 0.865540 | 5.485261e-65 | -8.615850e-47 |
| Msa0709630 | Msa1316330 | 0.824960 | 6.082099e-54 | -8.615850e-47 |
| Msa0709630 | Msa1320670 | 0.812115 | 4.986356e-51 | -8.615850e-47 |
| Msa0709630 | Msa1332950 | 0.822371 | 2.455168e-53 | -8.615850e-47 |
| Msa0709630 | Msa1338540 | 0.803136 | 4.026782e-49 | -8.615850e-47 |
| Msa0709630 | Msa1343170 | 0.835249 | 1.872935e-56 | -8.615850e-47 |
| Msa0709630 | Msa1343180 | 0.842121 | 3.137513e-58 | -8.615850e-47 |
| Msa0709630 | Msa1359690 | 0.837199 | 5.983022e-57 | -8.615850e-47 |
| Msa0709630 | Msa1362130 | 0.825969 | 3.508089e-54 | -8.615850e-47 |
| Msa0709630 | Msa1364040 | 0.903185 | 4.502381e-79 | -8.615850e-47 |
| Msa0709630 | Msa1366150 | 0.859672 | 3.517637e-63 | -8.615850e-47 |
| Msa0709630 | Msa1368750 | 0.849866 | 2.455410e-60 | -8.615850e-47 |
| Msa0709630 | Msa1374790 | 0.845454 | 4.019973e-59 | -8.615850e-47 |
| Msa0709630 | Msa1380120 | 0.837338 | 5.514889e-57 | -8.615850e-47 |
| Msa0709630 | Msa1381470 | 0.803317 | 3.692353e-49 | -8.615850e-47 |
| Msa0709630 | Msa1384150 | 0.835568 | 1.555336e-56 | -8.615850e-47 |
| Msa0709630 | Msa1387440 | 0.849766 | 2.618486e-60 | -8.615850e-47 |
| Msa0709630 | Msa1389690 | 0.801192 | 1.011199e-48 | -8.615850e-47 |
| Msa0709630 | Msa1392580 | 0.806675 | 7.331978e-50 | -8.615850e-47 |
| Msa0709630 | Msa1397400 | 0.822151 | 2.761156e-53 | -8.615850e-47 |
| Msa0709630 | Msa1405460 | 0.832744 | 7.935809e-56 | -8.615850e-47 |
| Msa0709630 | Msa1409410 | 0.832641 | 8.416464e-56 | -8.615850e-47 |
| Msa0709630 | Msa1415540 | 0.808299 | 3.315292e-50 | -8.615850e-47 |
| Msa0709630 | Msa1420950 | 0.840920 | 6.503087e-58 | -8.615850e-47 |
| Msa0709630 | Msa1429070 | 0.843211 | 1.610735e-58 | -8.615850e-47 |
| Msa0709630 | Msa1437930 | 0.808556 | 2.923074e-50 | -8.615850e-47 |
| Msa0709630 | Msa1438830 | 0.812424 | 4.269862e-51 | -8.615850e-47 |
| Msa0709630 | Msa1440630 | 0.810056 | 1.393268e-50 | -8.615850e-47 |
| Msa0709630 | Msa1441960 | 0.804432 | 2.166319e-49 | -8.615850e-47 |
| Msa0709630 | Msa1445120 | 0.815099 | 1.099671e-51 | -8.615850e-47 |
| Msa0709630 | Msa1446100 | 0.827066 | 1.920292e-54 | -8.615850e-47 |
| Msa0709630 | Msa1447170 | 0.817129 | 3.869868e-52 | -8.615850e-47 |
| Msa0709630 | Msa1450190 | 0.834091 | 3.661447e-56 | -8.615850e-47 |
| Msa0709630 | Msa1451820 | 0.845847 | 3.145208e-59 | -8.615850e-47 |
| Msa0121330 | Msa0709630 | 0.809751 | 1.620725e-50 | -8.615850e-47 |
| Msa0122330 | Msa0709630 | 0.810396 | 1.176944e-50 | -8.615850e-47 |
| Msa0123070 | Msa0709630 | 0.822027 | 2.950086e-53 | -8.615850e-47 |
| Msa0125360 | Msa0709630 | 0.819258 | 1.276584e-52 | -8.615850e-47 |
| Msa0128460 | Msa0709630 | 0.824321 | 8.598680e-54 | -8.615850e-47 |
| Msa0140280 | Msa0709630 | 0.840881 | 6.657356e-58 | -8.615850e-47 |
| Msa0140380 | Msa0709630 | 0.800289 | 1.545674e-48 | -8.615850e-47 |
| Msa0143670 | Msa0709630 | 0.818023 | 2.433406e-52 | -8.615850e-47 |
| Msa0159590 | Msa0709630 | 0.817189 | 3.752666e-52 | -8.615850e-47 |
| Msa0159620 | Msa0709630 | 0.805630 | 1.216829e-49 | -8.615850e-47 |
| Msa0174290 | Msa0709630 | 0.835984 | 1.220700e-56 | -8.615850e-47 |
| Msa0181650 | Msa0709630 | 0.835987 | 1.218148e-56 | -8.615850e-47 |
| Msa0190110 | Msa0709630 | 0.813296 | 2.750163e-51 | -8.615850e-47 |
| Msa0190570 | Msa0709630 | 0.845014 | 5.287663e-59 | -8.615850e-47 |
| Msa0190730 | Msa0709630 | 0.817370 | 3.416193e-52 | -8.615850e-47 |
| Msa0200050 | Msa0709630 | 0.840390 | 8.948708e-58 | -8.615850e-47 |
| Msa0213030 | Msa0709630 | 0.862798 | 3.926635e-64 | -8.615850e-47 |
| Msa0225860 | Msa0709630 | 0.825123 | 5.563526e-54 | -8.615850e-47 |
| Msa0230800 | Msa0709630 | 0.804468 | 2.129246e-49 | -8.615850e-47 |
| Msa0232760 | Msa0709630 | 0.838419 | 2.908649e-57 | -8.615850e-47 |
| Msa0233020 | Msa0709630 | 0.810636 | 1.044395e-50 | -8.615850e-47 |
| Msa0367150 | Msa0709630 | 0.831146 | 1.969629e-55 | -8.615850e-47 |
| Msa0367520 | Msa0709630 | 0.826759 | 2.274186e-54 | -8.615850e-47 |
| Msa0367690 | Msa0709630 | 0.800401 | 1.466508e-48 | -8.615850e-47 |
| Msa0368860 | Msa0709630 | 0.818789 | 1.631997e-52 | -8.615850e-47 |
| Msa0371270 | Msa0709630 | 0.826219 | 3.059161e-54 | -8.615850e-47 |
| Msa0373500 | Msa0709630 | 0.820284 | 7.441366e-53 | -8.615850e-47 |
| Msa0377710 | Msa0709630 | 0.814661 | 1.374824e-51 | -8.615850e-47 |
| Msa0380670 | Msa0709630 | 0.831817 | 1.346067e-55 | -8.615850e-47 |
| Msa0383000 | Msa0709630 | 0.811971 | 5.359583e-51 | -8.615850e-47 |
| Msa0389950 | Msa0709630 | 0.806430 | 8.257043e-50 | -8.615850e-47 |
| Msa0405620 | Msa0709630 | 0.809420 | 1.909059e-50 | -8.615850e-47 |
| Msa0419540 | Msa0709630 | 0.818798 | 1.624063e-52 | -8.615850e-47 |
| Msa0430300 | Msa0709630 | 0.834787 | 2.449397e-56 | -8.615850e-47 |
| Msa0432010 | Msa0709630 | 0.849463 | 3.181333e-60 | -8.615850e-47 |
| Msa0433150 | Msa0709630 | 0.817319 | 3.506860e-52 | -8.615850e-47 |
| Msa0436330 | Msa0709630 | 0.815476 | 9.068017e-52 | -8.615850e-47 |
| Msa0436910 | Msa0709630 | 0.804059 | 2.591119e-49 | -8.615850e-47 |
| Msa0447750 | Msa0709630 | 0.814921 | 1.204391e-51 | -8.615850e-47 |
| Msa0454560 | Msa0709630 | 0.804324 | 2.281714e-49 | -8.615850e-47 |
| Msa0459740 | Msa0709630 | 0.836713 | 7.961536e-57 | -8.615850e-47 |
| Msa0462780 | Msa0709630 | 0.824403 | 8.225038e-54 | -8.615850e-47 |
| Msa0464000 | Msa0709630 | 0.800961 | 1.127444e-48 | -8.615850e-47 |
| Msa0465530 | Msa0709630 | 0.826186 | 3.114237e-54 | -8.615850e-47 |
| Msa0481890 | Msa0709630 | 0.877386 | 6.551208e-69 | -8.615850e-47 |
| Msa0242590 | Msa0709630 | 0.823218 | 1.558982e-53 | -8.615850e-47 |
| Msa0260510 | Msa0709630 | 0.823801 | 1.139165e-53 | -8.615850e-47 |
| Msa0269210 | Msa0709630 | 0.870246 | 1.687264e-66 | -8.615850e-47 |
| Msa0271880 | Msa0709630 | 0.817155 | 3.818618e-52 | -8.615850e-47 |
| Msa0280790 | Msa0709630 | 0.825780 | 3.888826e-54 | -8.615850e-47 |
| Msa0298470 | Msa0709630 | 0.839779 | 1.291721e-57 | -8.615850e-47 |
| Msa0307270 | Msa0709630 | 0.810987 | 8.769767e-51 | -8.615850e-47 |
| Msa0310850 | Msa0709630 | 0.810962 | 8.878452e-51 | -8.615850e-47 |
| Msa0330380 | Msa0709630 | 0.817925 | 2.560398e-52 | -8.615850e-47 |
| Msa0340500 | Msa0709630 | 0.837789 | 4.224021e-57 | -8.615850e-47 |
| Msa0343010 | Msa0709630 | 0.829891 | 3.993031e-55 | -8.615850e-47 |
| Msa0361910 | Msa0709630 | 0.818836 | 1.592170e-52 | -8.615850e-47 |
| Msa0483100 | Msa0709630 | 0.820301 | 7.371777e-53 | -8.615850e-47 |
| Msa0502510 | Msa0709630 | 0.840403 | 8.878093e-58 | -8.615850e-47 |
| Msa0514580 | Msa0709630 | 0.803800 | 2.932151e-49 | -8.615850e-47 |
| Msa0520870 | Msa0709630 | 0.814353 | 1.608894e-51 | -8.615850e-47 |
| Msa0528570 | Msa0709630 | 0.809772 | 1.604001e-50 | -8.615850e-47 |
| Msa0529030 | Msa0709630 | 0.830701 | 2.532812e-55 | -8.615850e-47 |
| Msa0531960 | Msa0709630 | 0.842807 | 2.063426e-58 | -8.615850e-47 |
| Msa0534720 | Msa0709630 | 0.811451 | 6.957127e-51 | -8.615850e-47 |
| Msa0567170 | Msa0709630 | 0.857078 | 2.084984e-62 | -8.615850e-47 |
| Msa0577280 | Msa0709630 | 0.801528 | 8.630926e-49 | -8.615850e-47 |
| Msa0580370 | Msa0709630 | 0.855867 | 4.727559e-62 | -8.615850e-47 |
| Msa0580810 | Msa0709630 | 0.829975 | 3.810575e-55 | -8.615850e-47 |
| Msa0588920 | Msa0709630 | 0.853115 | 2.957246e-61 | -8.615850e-47 |
| Msa0590200 | Msa0709630 | 0.800037 | 1.738724e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0709630 | MtrunA17_Chr2g0330051 | 95.157 | 413 | 13 | 2 | 1 | 413 | 1 | 406 | 0.0 | 796 |
| Msa0709630 | MtrunA17_Chr8g0342551 | 53.047 | 443 | 164 | 13 | 1 | 410 | 1 | 432 | 3.22e-108 | 325 |
| Msa0709630 | MtrunA17_Chr3g0135851 | 46.727 | 443 | 184 | 14 | 1 | 402 | 1 | 432 | 2.14e-84 | 265 |
| Msa0709630 | MtrunA17_Chr4g0025441 | 41.912 | 272 | 135 | 6 | 1 | 260 | 1 | 261 | 1.33e-38 | 144 |
| Msa0709630 | MtrunA17_Chr6g0462191 | 35.974 | 303 | 155 | 7 | 83 | 356 | 105 | 397 | 5.68e-29 | 117 |
| Msa0709630 | MtrunA17_Chr8g0346021 | 41.451 | 193 | 85 | 7 | 83 | 260 | 125 | 304 | 9.75e-29 | 118 |
| Msa0709630 | MtrunA17_Chr1g0200161 | 37.989 | 179 | 99 | 5 | 84 | 259 | 140 | 309 | 3.37e-27 | 113 |
| Msa0709630 | MtrunA17_Chr1g0181581 | 39.896 | 193 | 98 | 7 | 62 | 252 | 99 | 275 | 7.88e-27 | 111 |
| Msa0709630 | MtrunA17_Chr7g0263731 | 31.287 | 342 | 164 | 10 | 59 | 349 | 88 | 409 | 1.00e-25 | 108 |
| Msa0709630 | MtrunA17_Chr1g0204901 | 46.087 | 115 | 49 | 2 | 84 | 185 | 135 | 249 | 1.29e-23 | 102 |
| Msa0709630 | MtrunA17_Chr2g0316401 | 31.455 | 213 | 127 | 5 | 50 | 259 | 42 | 238 | 6.52e-22 | 95.5 |
| Msa0709630 | MtrunA17_Chr4g0020671 | 38.060 | 134 | 74 | 3 | 84 | 211 | 100 | 230 | 2.13e-21 | 95.5 |
| Msa0709630 | MtrunA17_Chr2g0283321 | 34.270 | 178 | 105 | 3 | 87 | 264 | 65 | 230 | 6.24e-21 | 92.4 |
| Msa0709630 | MtrunA17_Chr8g0340761 | 31.373 | 204 | 75 | 3 | 1 | 151 | 1 | 192 | 2.85e-20 | 92.0 |
| Msa0709630 | MtrunA17_Chr4g0057321 | 38.667 | 150 | 85 | 2 | 1 | 145 | 1 | 148 | 8.80e-20 | 90.9 |
| Msa0709630 | MtrunA17_Chr1g0166431 | 34.222 | 225 | 106 | 7 | 1 | 183 | 7 | 231 | 1.26e-18 | 87.4 |
| Msa0709630 | MtrunA17_Chr4g0060381 | 34.831 | 178 | 93 | 5 | 1 | 159 | 1 | 174 | 1.55e-18 | 87.8 |
| Msa0709630 | MtrunA17_Chr3g0126901 | 31.206 | 282 | 144 | 9 | 85 | 349 | 112 | 360 | 1.59e-18 | 87.0 |
| Msa0709630 | MtrunA17_Chr1g0146931 | 39.583 | 192 | 97 | 5 | 83 | 255 | 120 | 311 | 4.46e-18 | 85.9 |
| Msa0709630 | MtrunA17_Chr2g0330921 | 34.555 | 191 | 97 | 6 | 1 | 166 | 1 | 188 | 5.41e-18 | 84.7 |
| Msa0709630 | MtrunA17_Chr8g0371131 | 53.623 | 69 | 32 | 0 | 80 | 148 | 66 | 134 | 2.42e-17 | 78.6 |
| Msa0709630 | MtrunA17_Chr4g0045641 | 31.818 | 154 | 88 | 3 | 72 | 213 | 134 | 282 | 3.94e-17 | 83.2 |
| Msa0709630 | MtrunA17_Chr6g0472551 | 62.903 | 62 | 23 | 0 | 87 | 148 | 119 | 180 | 8.23e-17 | 82.0 |
| Msa0709630 | MtrunA17_Chr1g0172611 | 26.403 | 303 | 170 | 10 | 87 | 376 | 107 | 369 | 2.04e-16 | 80.1 |
| Msa0709630 | MtrunA17_Chr1g0203711 | 56.061 | 66 | 29 | 0 | 80 | 145 | 110 | 175 | 3.65e-16 | 80.1 |
| Msa0709630 | MtrunA17_Chr7g0273951 | 31.285 | 179 | 92 | 4 | 1 | 153 | 1 | 174 | 1.09e-15 | 78.2 |
| Msa0709630 | MtrunA17_Chr7g0273861 | 50.000 | 66 | 33 | 0 | 84 | 149 | 124 | 189 | 2.59e-15 | 77.4 |
| Msa0709630 | MtrunA17_Chr5g0416161 | 38.614 | 101 | 62 | 0 | 63 | 163 | 97 | 197 | 1.69e-13 | 72.4 |
| Msa0709630 | MtrunA17_Chr1g0156121 | 50.746 | 67 | 33 | 0 | 85 | 151 | 124 | 190 | 5.96e-13 | 70.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0709630 | AT1G72670.1 | 46.934 | 424 | 167 | 17 | 1 | 395 | 1 | 395 | 1.04e-91 | 283 |
| Msa0709630 | AT2G26180.1 | 47.255 | 419 | 176 | 13 | 1 | 392 | 1 | 401 | 6.56e-84 | 263 |
| Msa0709630 | AT1G17480.1 | 41.962 | 367 | 159 | 12 | 1 | 346 | 1 | 334 | 6.23e-63 | 207 |
| Msa0709630 | AT5G03040.1 | 40.394 | 203 | 111 | 5 | 56 | 256 | 85 | 279 | 6.03e-33 | 129 |
| Msa0709630 | AT5G03040.3 | 40.394 | 203 | 111 | 5 | 56 | 256 | 85 | 279 | 6.03e-33 | 129 |
| Msa0709630 | AT5G03040.2 | 40.394 | 203 | 111 | 5 | 56 | 256 | 85 | 279 | 6.03e-33 | 129 |
| Msa0709630 | AT3G22190.3 | 48.901 | 182 | 77 | 4 | 83 | 260 | 86 | 255 | 7.33e-32 | 125 |
| Msa0709630 | AT3G22190.2 | 48.901 | 182 | 77 | 4 | 83 | 260 | 86 | 255 | 7.33e-32 | 125 |
| Msa0709630 | AT3G22190.4 | 48.901 | 182 | 77 | 4 | 83 | 260 | 86 | 255 | 7.33e-32 | 125 |
| Msa0709630 | AT3G22190.1 | 48.901 | 182 | 77 | 4 | 83 | 260 | 86 | 255 | 7.33e-32 | 125 |
| Msa0709630 | AT1G01110.2 | 36.715 | 207 | 108 | 5 | 75 | 267 | 111 | 308 | 2.44e-27 | 114 |
| Msa0709630 | AT4G00820.1 | 38.095 | 189 | 89 | 5 | 83 | 255 | 130 | 306 | 3.45e-26 | 110 |
| Msa0709630 | AT3G52290.1 | 37.572 | 173 | 97 | 4 | 84 | 255 | 107 | 269 | 6.16e-25 | 106 |
| Msa0709630 | AT3G09710.1 | 37.017 | 181 | 99 | 6 | 83 | 260 | 106 | 274 | 2.23e-24 | 105 |
| Msa0709630 | AT3G49260.3 | 35.519 | 183 | 97 | 5 | 87 | 255 | 122 | 297 | 3.05e-24 | 104 |
| Msa0709630 | AT3G49260.1 | 35.519 | 183 | 96 | 6 | 87 | 255 | 122 | 296 | 4.43e-24 | 104 |
| Msa0709630 | AT3G49260.4 | 35.519 | 183 | 96 | 6 | 87 | 255 | 122 | 296 | 4.43e-24 | 104 |
| Msa0709630 | AT3G49260.2 | 35.519 | 183 | 96 | 6 | 87 | 255 | 122 | 296 | 4.43e-24 | 104 |
| Msa0709630 | AT3G09710.2 | 34.896 | 192 | 102 | 5 | 83 | 260 | 106 | 288 | 4.72e-24 | 104 |
| Msa0709630 | AT4G14750.1 | 28.826 | 281 | 162 | 8 | 1 | 253 | 1 | 271 | 1.21e-23 | 102 |
| Msa0709630 | AT4G14750.2 | 28.826 | 281 | 162 | 8 | 1 | 253 | 60 | 330 | 2.05e-23 | 102 |
| Msa0709630 | AT4G14750.3 | 28.826 | 281 | 162 | 8 | 1 | 253 | 60 | 330 | 2.23e-23 | 102 |
| Msa0709630 | AT4G10640.1 | 28.272 | 382 | 195 | 12 | 7 | 349 | 18 | 359 | 6.35e-23 | 100 |
| Msa0709630 | AT3G59690.2 | 37.324 | 142 | 75 | 3 | 76 | 213 | 161 | 292 | 9.11e-21 | 94.7 |
| Msa0709630 | AT3G59690.1 | 37.324 | 142 | 75 | 3 | 76 | 213 | 161 | 292 | 9.11e-21 | 94.7 |
| Msa0709630 | AT3G15050.1 | 31.429 | 210 | 119 | 5 | 87 | 287 | 52 | 245 | 1.44e-20 | 90.9 |
| Msa0709630 | AT2G26410.2 | 34.054 | 185 | 103 | 5 | 83 | 260 | 146 | 318 | 5.86e-20 | 92.4 |
| Msa0709630 | AT2G26410.1 | 34.054 | 185 | 103 | 5 | 83 | 260 | 146 | 318 | 5.86e-20 | 92.4 |
| Msa0709630 | AT2G33990.1 | 31.818 | 176 | 109 | 3 | 84 | 259 | 46 | 210 | 8.64e-19 | 85.9 |
| Msa0709630 | AT1G18840.1 | 45.745 | 94 | 47 | 1 | 82 | 171 | 106 | 199 | 4.53e-18 | 86.7 |
| Msa0709630 | AT1G18840.3 | 45.745 | 94 | 47 | 1 | 82 | 171 | 106 | 199 | 4.53e-18 | 86.7 |
| Msa0709630 | AT1G18840.2 | 45.745 | 94 | 47 | 1 | 82 | 171 | 106 | 199 | 4.53e-18 | 86.7 |
| Msa0709630 | AT4G23060.1 | 58.108 | 74 | 31 | 0 | 85 | 158 | 167 | 240 | 5.27e-18 | 86.3 |
| Msa0709630 | AT4G29150.1 | 44.545 | 110 | 53 | 2 | 83 | 184 | 129 | 238 | 2.89e-17 | 83.6 |
| Msa0709630 | AT5G13460.1 | 36.552 | 145 | 71 | 4 | 79 | 211 | 103 | 238 | 5.05e-17 | 83.2 |
| Msa0709630 | AT3G51380.1 | 57.576 | 66 | 28 | 0 | 83 | 148 | 35 | 100 | 8.82e-17 | 75.9 |
| Msa0709630 | AT3G16490.1 | 44.565 | 92 | 49 | 1 | 84 | 173 | 106 | 197 | 1.16e-16 | 81.6 |
| Msa0709630 | AT1G51960.1 | 49.333 | 75 | 37 | 1 | 78 | 151 | 92 | 166 | 1.78e-16 | 80.5 |
| Msa0709630 | AT5G07240.1 | 28.819 | 288 | 147 | 9 | 84 | 367 | 104 | 337 | 2.55e-16 | 80.5 |
| Msa0709630 | AT5G07240.2 | 28.819 | 288 | 147 | 9 | 84 | 367 | 150 | 383 | 4.34e-16 | 80.1 |
| Msa0709630 | AT1G74690.1 | 34.921 | 189 | 87 | 6 | 1 | 157 | 1 | 185 | 4.34e-16 | 80.9 |
| Msa0709630 | AT1G14380.1 | 47.297 | 74 | 39 | 0 | 78 | 151 | 87 | 160 | 6.19e-15 | 77.4 |
| Msa0709630 | AT1G14380.3 | 47.297 | 74 | 39 | 0 | 78 | 151 | 87 | 160 | 6.19e-15 | 77.4 |
| Msa0709630 | AT1G14380.4 | 47.297 | 74 | 39 | 0 | 78 | 151 | 87 | 160 | 6.19e-15 | 77.4 |
| Msa0709630 | AT1G14380.6 | 35.542 | 166 | 86 | 5 | 1 | 151 | 1 | 160 | 6.78e-15 | 77.0 |
| Msa0709630 | AT1G14380.5 | 35.542 | 166 | 86 | 5 | 1 | 151 | 1 | 160 | 6.78e-15 | 77.0 |
| Msa0709630 | AT1G14380.2 | 35.542 | 166 | 86 | 5 | 1 | 151 | 1 | 160 | 6.78e-15 | 77.0 |
| Msa0709630 | AT1G14380.7 | 35.542 | 166 | 86 | 5 | 1 | 151 | 1 | 160 | 8.76e-15 | 76.6 |
| Msa0709630 | AT2G43680.4 | 33.099 | 142 | 88 | 4 | 70 | 211 | 310 | 444 | 1.95e-14 | 75.9 |
| Msa0709630 | AT2G43680.2 | 33.099 | 142 | 88 | 4 | 70 | 211 | 310 | 444 | 1.95e-14 | 75.9 |
| Msa0709630 | AT2G43680.3 | 33.099 | 142 | 88 | 4 | 70 | 211 | 310 | 444 | 1.95e-14 | 75.9 |
| Msa0709630 | AT2G43680.5 | 33.099 | 142 | 88 | 4 | 70 | 211 | 310 | 444 | 1.95e-14 | 75.9 |
| Msa0709630 | AT2G43680.1 | 33.099 | 142 | 88 | 4 | 70 | 211 | 311 | 445 | 2.02e-14 | 75.9 |
| Msa0709630 | AT5G03960.3 | 38.060 | 134 | 80 | 2 | 87 | 217 | 110 | 243 | 2.41e-14 | 74.7 |
| Msa0709630 | AT5G03960.2 | 38.060 | 134 | 80 | 2 | 87 | 217 | 110 | 243 | 2.41e-14 | 74.7 |
| Msa0709630 | AT5G03960.1 | 38.060 | 134 | 80 | 2 | 87 | 217 | 109 | 242 | 2.42e-14 | 74.7 |
| Msa0709630 | AT1G19870.1 | 34.483 | 145 | 77 | 3 | 51 | 179 | 165 | 307 | 7.02e-14 | 73.9 |
| Msa0709630 | AT1G19870.2 | 38.938 | 113 | 56 | 2 | 78 | 179 | 14 | 124 | 1.29e-13 | 73.2 |
| Msa0709630 | AT3G49380.1 | 36.364 | 121 | 65 | 3 | 27 | 141 | 52 | 166 | 1.61e-13 | 71.6 |
| Msa0709630 | AT5G62070.1 | 64.151 | 53 | 19 | 0 | 87 | 139 | 119 | 171 | 4.98e-13 | 70.9 |
Find 96 sgRNAs with CRISPR-Local
Find 189 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTGACCCTTCAGTTAATTTA+TGG | 0.180664 | 5_1:+769622 | Msa0709630:CDS |
| CAATGGGTGTTTCTGGAAAA+TGG | 0.187083 | 5_1:+767266 | Msa0709630:exon |
| GTTAGCCACTTTCTCATAAA+TGG | 0.214297 | 5_1:-769858 | None:intergenic |
| GTAGGGTTGTGTTGTGAAAT+TGG | 0.229055 | 5_1:-767215 | None:intergenic |
| TAGGGTTGTGTTGTGAAATT+GGG | 0.233355 | 5_1:-767214 | None:intergenic |
| GCTATGTCTGTGGGGATTAC+AGG | 0.271977 | 5_1:-770002 | None:intergenic |
| TGATAATAACTTGCCCTTAG+AGG | 0.285753 | 5_1:-769663 | None:intergenic |
| CTAAAGATTTCATCCTTATC+AGG | 0.290356 | 5_1:+767578 | Msa0709630:CDS |
| TCACTCTTCCTGCTTGAGAT+TGG | 0.302121 | 5_1:-769246 | None:intergenic |
| TTAACTTCATCTGCAGTTCC+AGG | 0.344133 | 5_1:-768934 | None:intergenic |
| GCAAGCTCTGGTTAGGGTTC+AGG | 0.355190 | 5_1:+768669 | Msa0709630:CDS |
| GTAGTAGTACTAAGAAGAAA+TGG | 0.355323 | 5_1:+767419 | Msa0709630:CDS |
| AACAAGCAGCTGTTACTCTA+AGG | 0.370485 | 5_1:+768641 | Msa0709630:CDS |
| CACAGTGAGATGAACTGATT+TGG | 0.379942 | 5_1:+769785 | Msa0709630:three_prime_UTR |
| CTGATAAGGATGAAATCTTT+AGG | 0.380880 | 5_1:-767577 | None:intergenic |
| ATGGGCTGCTATCCGCATTC+AGG | 0.390080 | 5_1:+767606 | Msa0709630:CDS |
| AGGCTAAGCTCAAAACTTAC+AGG | 0.390491 | 5_1:+769496 | Msa0709630:CDS |
| GGTGTATGCAAGCTCTGGTT+AGG | 0.390529 | 5_1:+768662 | Msa0709630:CDS |
| TTATCAACTTCATGTACATC+TGG | 0.395939 | 5_1:+769396 | Msa0709630:CDS |
| ATCGTTGTGCAACACCTCTA+AGG | 0.396953 | 5_1:+769649 | Msa0709630:CDS |
| CAAGGATGGTGTGAAATTCC+TGG | 0.403362 | 5_1:+768916 | Msa0709630:CDS |
| GATAATAGTATAAACAGTTC+TGG | 0.410910 | 5_1:+769597 | Msa0709630:CDS |
| TTCCTTCTTGATTGAAAAGT+AGG | 0.412386 | 5_1:-769279 | None:intergenic |
| CATTGCTCTATCCCTCTTGA+TGG | 0.414300 | 5_1:-768986 | None:intergenic |
| TTCCTAAGCTCTTGTTGTCA+TGG | 0.417603 | 5_1:-769173 | None:intergenic |
| AGCACCACCAGTCTTCTTGA+TGG | 0.424110 | 5_1:-767488 | None:intergenic |
| AGTTATTATCAAAATCGATA+TGG | 0.428695 | 5_1:+769675 | Msa0709630:CDS |
| CAGCCCATTCCTGCCTGATA+AGG | 0.431812 | 5_1:-767591 | None:intergenic |
| CATCCTTATCAGGCAGGAAT+GGG | 0.450099 | 5_1:+767588 | Msa0709630:CDS |
| AAGAGCTTTGAGAGCATTGA+GGG | 0.454446 | 5_1:+768573 | Msa0709630:CDS |
| CTAAGAAGAAATGGAAGCTA+TGG | 0.454548 | 5_1:+767428 | Msa0709630:CDS |
| AGGGTTGTGTTGTGAAATTG+GGG | 0.473403 | 5_1:-767213 | None:intergenic |
| TCATCCTTATCAGGCAGGAA+TGG | 0.473411 | 5_1:+767587 | Msa0709630:CDS |
| AATCCCCACAGACATAGCTT+TGG | 0.475015 | 5_1:+770007 | Msa0709630:three_prime_UTR |
| TTGAAATTTGAAAGTGTAGG+AGG | 0.478393 | 5_1:-767141 | None:intergenic |
| TTCCAATAAGAAAACCGATC+AGG | 0.485410 | 5_1:+767303 | Msa0709630:CDS |
| AGACTGCAAGCAATATTTAG+AGG | 0.495590 | 5_1:+768604 | Msa0709630:CDS |
| GAAATAGCTTGTTAGAGCGC+TGG | 0.496586 | 5_1:+769193 | Msa0709630:CDS |
| AGCAGCTGCAGTATCGGTAA+TGG | 0.501538 | 5_1:-767530 | None:intergenic |
| TGCAAGCAATATTTAGAGGC+AGG | 0.511357 | 5_1:+768608 | Msa0709630:CDS |
| TCTAAGGTGTATGCAAGCTC+TGG | 0.513287 | 5_1:+768657 | Msa0709630:CDS |
| GAAGGAATGGTGTGACAACT+AGG | 0.517271 | 5_1:+769295 | Msa0709630:CDS |
| AGATTTCATCCTTATCAGGC+AGG | 0.519223 | 5_1:+767582 | Msa0709630:CDS |
| ATCATCTTCGACTTTAAGCT+CGG | 0.520897 | 5_1:+769350 | Msa0709630:CDS |
| AGCAACAGCAGCTGCAGTAT+CGG | 0.521579 | 5_1:-767536 | None:intergenic |
| GTGTATGCAAGCTCTGGTTA+GGG | 0.521748 | 5_1:+768663 | Msa0709630:CDS |
| GTTATTATTATCAGCAAGGA+TGG | 0.522365 | 5_1:+768902 | Msa0709630:intron |
| GGCAAGAAGGTGCCATCAAG+AGG | 0.522656 | 5_1:+768974 | Msa0709630:CDS |
| TGATTGTAAATTTACCTGAT+CGG | 0.522844 | 5_1:-767317 | None:intergenic |
| TGGCAAACAAACCATGTCCA+TGG | 0.529332 | 5_1:+769217 | Msa0709630:CDS |
| TCTTCAACCATCAAGAAGAC+TGG | 0.529711 | 5_1:+767481 | Msa0709630:CDS |
| CCCTTCAGTTAATTTATGGA+AGG | 0.533849 | 5_1:+769626 | Msa0709630:CDS |
| TTCAGGCACGTGTGAGAGCT+AGG | 0.537833 | 5_1:+768686 | Msa0709630:CDS |
| AACCATGACAACAAGAGCTT+AGG | 0.537945 | 5_1:+769171 | Msa0709630:CDS |
| AAGCTAAGAATGAGGCAAGA+AGG | 0.538231 | 5_1:+768961 | Msa0709630:CDS |
| TCAAATTCATGTAGCTAGGT+AGG | 0.539947 | 5_1:-769461 | None:intergenic |
| GAGCTTAAAGTCGAAGATGA+TGG | 0.542387 | 5_1:-769348 | None:intergenic |
| TCCTTCCATAAATTAACTGA+AGG | 0.545088 | 5_1:-769627 | None:intergenic |
| CGGTGCCATTTATGAGAAAG+TGG | 0.546625 | 5_1:+769853 | Msa0709630:three_prime_UTR |
| ATTGGACTCTCCCATGGACA+TGG | 0.548204 | 5_1:-769228 | None:intergenic |
| CAGAATCAGCATGGTTGCGA+TGG | 0.549893 | 5_1:-768759 | None:intergenic |
| CTATGGAAATCATCTTCTGA+AGG | 0.550910 | 5_1:+767445 | Msa0709630:CDS |
| TAATCCAAAGCTATGTCTGT+GGG | 0.555077 | 5_1:-770011 | None:intergenic |
| ATTATCAAAATCGATATGGC+AGG | 0.555854 | 5_1:+769679 | Msa0709630:CDS |
| TCGTTGTGCAACACCTCTAA+GGG | 0.556401 | 5_1:+769650 | Msa0709630:CDS |
| CTTGAGATTGGACTCTCCCA+TGG | 0.558321 | 5_1:-769234 | None:intergenic |
| GGTTGTGTTGTGAAATTGGG+GGG | 0.560503 | 5_1:-767211 | None:intergenic |
| AAAAGAAATAGTTACCAAGA+AGG | 0.563052 | 5_1:-767641 | None:intergenic |
| GAGTTCGAAGAGACTCGTAA+TGG | 0.563998 | 5_1:+769530 | Msa0709630:CDS |
| TTTGAGAGCATTGAGGGCAG+TGG | 0.564489 | 5_1:+768579 | Msa0709630:CDS |
| GAAGAGCTTTGAGAGCATTG+AGG | 0.569321 | 5_1:+768572 | Msa0709630:CDS |
| CCTTCCATAAATTAACTGAA+GGG | 0.587260 | 5_1:-769626 | None:intergenic |
| TCTGTCAAATTCATGTAGCT+AGG | 0.592487 | 5_1:-769465 | None:intergenic |
| GAATTTGACAGAATCAACTA+AGG | 0.594832 | 5_1:+769476 | Msa0709630:CDS |
| ATCTATGCCAGAAGCAACAG+AGG | 0.595241 | 5_1:+769425 | Msa0709630:CDS |
| GGGAGAGTCCAATCTCAAGC+AGG | 0.595864 | 5_1:+769238 | Msa0709630:CDS |
| GGCAAACAAACCATGTCCAT+GGG | 0.598464 | 5_1:+769218 | Msa0709630:CDS |
| TTAAAGCAAAGCTAAGAATG+AGG | 0.599503 | 5_1:+768953 | Msa0709630:CDS |
| TATGGAAATCATCTTCTGAA+GGG | 0.607690 | 5_1:+767446 | Msa0709630:CDS |
| TGATTCTGTTAAGCTTGTAG+AGG | 0.611493 | 5_1:+768774 | Msa0709630:CDS |
| TTAATCCAAAGCTATGTCTG+TGG | 0.618385 | 5_1:-770012 | None:intergenic |
| CATCAAGAGGGATAGAGCAA+TGG | 0.627816 | 5_1:+768987 | Msa0709630:CDS |
| TAGCTTGTTAGAGCGCTGGA+TGG | 0.632949 | 5_1:+769197 | Msa0709630:CDS |
| TCAACACTTAATTACCTGTG+TGG | 0.634403 | 5_1:-769022 | None:intergenic |
| AATTTGAAATTTGAAAGTGT+AGG | 0.634771 | 5_1:-767144 | None:intergenic |
| AAATTTGAAAGTGTAGGAGG+TGG | 0.636927 | 5_1:-767138 | None:intergenic |
| GCAAGAAGGTGCCATCAAGA+GGG | 0.646053 | 5_1:+768975 | Msa0709630:CDS |
| GTGTGAGAGCTAGGAATGTG+AGG | 0.652883 | 5_1:+768695 | Msa0709630:CDS |
| GGGTTGTGTTGTGAAATTGG+GGG | 0.654292 | 5_1:-767212 | None:intergenic |
| CAAGCTTAACAGAATCAGCA+TGG | 0.655634 | 5_1:-768768 | None:intergenic |
| GGCATACTCTCTATCCACAC+AGG | 0.672618 | 5_1:+769008 | Msa0709630:CDS |
| TCAACCATCAAGAAGACTGG+TGG | 0.675787 | 5_1:+767484 | Msa0709630:CDS |
| AATGTGAGGAAATCTCCAGA+AGG | 0.676143 | 5_1:+768709 | Msa0709630:CDS |
| AATCCAAAGCTATGTCTGTG+GGG | 0.708556 | 5_1:-770010 | None:intergenic |
| CTTTCACTCAATCAATACAG+CGG | 0.736905 | 5_1:+769833 | Msa0709630:three_prime_UTR |
| TCACTGTGTCAAGATGACAA+TGG | 0.742872 | 5_1:-769770 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTCAAAATATGATAATATA+AGG | - | chr5_1:768176-768195 | None:intergenic | 10.0% |
| !! | TAAAACAACAACAAAAAAAA+GGG | - | chr5_1:767360-767379 | None:intergenic | 15.0% |
| !! | TTAAAACAACAACAAAAAAA+AGG | - | chr5_1:767361-767380 | None:intergenic | 15.0% |
| !!! | TTAATTAGTTTATCTTATGA+TGG | + | chr5_1:768150-768169 | Msa0709630:intron | 15.0% |
| !! | TAAAAAGTTGAATTTCAATT+AGG | - | chr5_1:768227-768246 | None:intergenic | 15.0% |
| !! | AAAGAGAAAGAAAAAATAAA+GGG | - | chr5_1:768279-768298 | None:intergenic | 15.0% |
| !! | AAAAGAGAAAGAAAAAATAA+AGG | - | chr5_1:768280-768299 | None:intergenic | 15.0% |
| !!! | TTATTTTTTCTTTCTCTTTT+TGG | + | chr5_1:768280-768299 | Msa0709630:intron | 15.0% |
| !!! | TGTATTTTAAAAAGAAATAG+AGG | - | chr5_1:768542-768561 | None:intergenic | 15.0% |
| !!! | TTCTTTTTAAAATACATTGA+AGG | + | chr5_1:768546-768565 | Msa0709630:intron | 15.0% |
| !! | ATTACATAATATTCTCTAAA+TGG | + | chr5_1:768825-768844 | Msa0709630:intron | 15.0% |
| !!! | AATTTGAAATTTGAAAGTGT+AGG | - | chr5_1:767147-767166 | None:intergenic | 20.0% |
| !! | AAGAGAAAGAAAAAATAAAG+GGG | - | chr5_1:768278-768297 | None:intergenic | 20.0% |
| !! | TGCAATAAATCCTAAAAAAA+TGG | - | chr5_1:768422-768441 | None:intergenic | 20.0% |
| !! | TTATAGTATATGCTAACATA+AGG | + | chr5_1:768866-768885 | Msa0709630:intron | 20.0% |
| !! | TATAGTATATGCTAACATAA+GGG | + | chr5_1:768867-768886 | Msa0709630:intron | 20.0% |
| !! | AGTTATTATCAAAATCGATA+TGG | + | chr5_1:769675-769694 | Msa0709630:CDS | 20.0% |
| !!! | TAAATTTTGAGTAAGAAGTA+CGG | + | chr5_1:770061-770080 | Msa0709630:three_prime_UTR | 20.0% |
| ! | TGATTGTAAATTTACCTGAT+CGG | - | chr5_1:767320-767339 | None:intergenic | 25.0% |
| ! | AAAAGAAATAGTTACCAAGA+AGG | - | chr5_1:767644-767663 | None:intergenic | 25.0% |
| ! | TGAAATTCTAAGTCCAATTA+TGG | + | chr5_1:767703-767722 | Msa0709630:intron | 25.0% |
| ! | TTACAAGATCTACTAATAGT+TGG | + | chr5_1:767759-767778 | Msa0709630:intron | 25.0% |
| ! | TACAAGATCTACTAATAGTT+GGG | + | chr5_1:767760-767779 | Msa0709630:intron | 25.0% |
| ! | TAAAACAATGTGAAAAAGAG+TGG | - | chr5_1:768060-768079 | None:intergenic | 25.0% |
| ! | GTTGAATTTCAATTAGGTAA+AGG | - | chr5_1:768221-768240 | None:intergenic | 25.0% |
| ! | AGAGAAAGAAAAAATAAAGG+GGG | - | chr5_1:768277-768296 | None:intergenic | 25.0% |
| !! | TTTTCTTTCTCTTTTTGGAT+TGG | + | chr5_1:768285-768304 | Msa0709630:intron | 25.0% |
| !! | TTTCTTTCTCTTTTTGGATT+GGG | + | chr5_1:768286-768305 | Msa0709630:intron | 25.0% |
| !!! | TAAACACTGTCCATTTTTTT+AGG | + | chr5_1:768409-768428 | Msa0709630:intron | 25.0% |
| ! | AAAAAAAAAGTAACCAAGAG+TGG | - | chr5_1:768455-768474 | None:intergenic | 25.0% |
| !!! | AATGGTTATTTTGAGTTACA+AGG | + | chr5_1:768843-768862 | Msa0709630:intron | 25.0% |
| ! | AAAAGCAAGCAAAGATATAT+TGG | - | chr5_1:769079-769098 | None:intergenic | 25.0% |
| ! | GATAATAGTATAAACAGTTC+TGG | + | chr5_1:769597-769616 | Msa0709630:CDS | 25.0% |
| !! | GTAGATAAAAATTTTACGTG+AGG | + | chr5_1:769888-769907 | Msa0709630:three_prime_UTR | 25.0% |
| ! | TTGAAATTTGAAAGTGTAGG+AGG | - | chr5_1:767144-767163 | None:intergenic | 30.0% |
| ! | AGTGTTAATGTTGTTTGTTC+AGG | + | chr5_1:767387-767406 | Msa0709630:intron | 30.0% |
| GTAGTAGTACTAAGAAGAAA+TGG | + | chr5_1:767419-767438 | Msa0709630:CDS | 30.0% | |
| TATGGAAATCATCTTCTGAA+GGG | + | chr5_1:767446-767465 | Msa0709630:CDS | 30.0% | |
| CTGATAAGGATGAAATCTTT+AGG | - | chr5_1:767580-767599 | None:intergenic | 30.0% | |
| CTAAAGATTTCATCCTTATC+AGG | + | chr5_1:767578-767597 | Msa0709630:CDS | 30.0% | |
| CAATTATGGATCAGAATTCA+GGG | + | chr5_1:767717-767736 | Msa0709630:intron | 30.0% | |
| AATTATGGATCAGAATTCAG+GGG | + | chr5_1:767718-767737 | Msa0709630:intron | 30.0% | |
| ATCTACTAATAGTTGGGATT+TGG | + | chr5_1:767766-767785 | Msa0709630:intron | 30.0% | |
| TCTACTAATAGTTGGGATTT+GGG | + | chr5_1:767767-767786 | Msa0709630:intron | 30.0% | |
| GGATTTGGGAGTTTAAAAAA+TGG | + | chr5_1:767781-767800 | Msa0709630:intron | 30.0% | |
| ! | ACCTTTGTGTTTTCATGATT+TGG | + | chr5_1:767804-767823 | Msa0709630:intron | 30.0% |
| ! | CCTTTGTGTTTTCATGATTT+GGG | + | chr5_1:767805-767824 | Msa0709630:intron | 30.0% |
| AACCCCAATAAAGGAAAAAA+GGG | - | chr5_1:767882-767901 | None:intergenic | 30.0% | |
| AAATCATTCAACCCCAATAA+AGG | - | chr5_1:767891-767910 | None:intergenic | 30.0% | |
| TTATTGGGGTTGAATGATTT+AGG | + | chr5_1:767891-767910 | Msa0709630:intron | 30.0% | |
| GTTGAATGATTTAGGTAGTT+AGG | + | chr5_1:767899-767918 | Msa0709630:intron | 30.0% | |
| ! | TAGGTTCTTTTGTATGGTTA+TGG | + | chr5_1:767918-767937 | Msa0709630:intron | 30.0% |
| ! | ATTTTACAGTCATCTTAAGG+AGG | - | chr5_1:768252-768271 | None:intergenic | 30.0% |
| AGAAAGAAAAAATAAAGGGG+GGG | - | chr5_1:768275-768294 | None:intergenic | 30.0% | |
| GAGAAAGAAAAAATAAAGGG+GGG | - | chr5_1:768276-768295 | None:intergenic | 30.0% | |
| ! | TTCTTTCTCTTTTTGGATTG+GGG | + | chr5_1:768287-768306 | Msa0709630:intron | 30.0% |
| CCTTGCTGATAATAATAACA+TGG | - | chr5_1:768901-768920 | None:intergenic | 30.0% | |
| CCATGTTATTATTATCAGCA+AGG | + | chr5_1:768898-768917 | Msa0709630:intron | 30.0% | |
| GTTATTATTATCAGCAAGGA+TGG | + | chr5_1:768902-768921 | Msa0709630:intron | 30.0% | |
| TTAAAGCAAAGCTAAGAATG+AGG | + | chr5_1:768953-768972 | Msa0709630:CDS | 30.0% | |
| !!! | GATTTTGTGGATTTTGAGTT+TGG | - | chr5_1:769126-769145 | None:intergenic | 30.0% |
| !! | TTCCTACTTTTCAATCAAGA+AGG | + | chr5_1:769277-769296 | Msa0709630:CDS | 30.0% |
| TTCCTTCTTGATTGAAAAGT+AGG | - | chr5_1:769282-769301 | None:intergenic | 30.0% | |
| ! | ACTTTTCAATCAAGAAGGAA+TGG | + | chr5_1:769282-769301 | Msa0709630:CDS | 30.0% |
| TTATCAACTTCATGTACATC+TGG | + | chr5_1:769396-769415 | Msa0709630:CDS | 30.0% | |
| GAATTTGACAGAATCAACTA+AGG | + | chr5_1:769476-769495 | Msa0709630:CDS | 30.0% | |
| ! | ACAAGTACAACTTTTCTGAA+TGG | + | chr5_1:769573-769592 | Msa0709630:CDS | 30.0% |
| CCTTCCATAAATTAACTGAA+GGG | - | chr5_1:769629-769648 | None:intergenic | 30.0% | |
| TCCTTCCATAAATTAACTGA+AGG | - | chr5_1:769630-769649 | None:intergenic | 30.0% | |
| ATTATCAAAATCGATATGGC+AGG | + | chr5_1:769679-769698 | Msa0709630:CDS | 30.0% | |
| ! | AAATTTGAAAGTGTAGGAGG+TGG | - | chr5_1:767141-767160 | None:intergenic | 35.0% |
| TAGGGTTGTGTTGTGAAATT+GGG | - | chr5_1:767217-767236 | None:intergenic | 35.0% | |
| ! | CGATTTTTGCAGAGATTGTA+GGG | - | chr5_1:767235-767254 | None:intergenic | 35.0% |
| CCTACAATCTCTGCAAAAAT+CGG | + | chr5_1:767233-767252 | Msa0709630:five_prime_UTR | 35.0% | |
| !! | AAATCGGTTCTTTTCTCCAA+TGG | + | chr5_1:767249-767268 | Msa0709630:exon | 35.0% |
| !! | AATCGGTTCTTTTCTCCAAT+GGG | + | chr5_1:767250-767269 | Msa0709630:exon | 35.0% |
| TTCCAATAAGAAAACCGATC+AGG | + | chr5_1:767303-767322 | Msa0709630:CDS | 35.0% | |
| !! | TACCTGATCGGTTTTCTTAT+TGG | - | chr5_1:767308-767327 | None:intergenic | 35.0% |
| CTAAGAAGAAATGGAAGCTA+TGG | + | chr5_1:767428-767447 | Msa0709630:CDS | 35.0% | |
| CTATGGAAATCATCTTCTGA+AGG | + | chr5_1:767445-767464 | Msa0709630:CDS | 35.0% | |
| GATGAACAATATTCACAGCA+AGG | - | chr5_1:767667-767686 | None:intergenic | 35.0% | |
| CCTGAATTCTGATCCATAAT+TGG | - | chr5_1:767719-767738 | None:intergenic | 35.0% | |
| CCAATTATGGATCAGAATTC+AGG | + | chr5_1:767716-767735 | Msa0709630:intron | 35.0% | |
| CCCAAATCATGAAAACACAA+AGG | - | chr5_1:767808-767827 | None:intergenic | 35.0% | |
| !!! | TTCCCCCTTTTTTCCTTTAT+TGG | + | chr5_1:767875-767894 | Msa0709630:intron | 35.0% |
| !!! | TCCCCCTTTTTTCCTTTATT+GGG | + | chr5_1:767876-767895 | Msa0709630:intron | 35.0% |
| ACCCCAATAAAGGAAAAAAG+GGG | - | chr5_1:767881-767900 | None:intergenic | 35.0% | |
| CAACCCCAATAAAGGAAAAA+AGG | - | chr5_1:767883-767902 | None:intergenic | 35.0% | |
| ! | GGTAGTTAGGTTCTTTTGTA+TGG | + | chr5_1:767912-767931 | Msa0709630:intron | 35.0% |
| TATGGTTATGGTAATATGCC+AGG | + | chr5_1:767930-767949 | Msa0709630:intron | 35.0% | |
| ATGGTTATGGTAATATGCCA+GGG | + | chr5_1:767931-767950 | Msa0709630:intron | 35.0% | |
| ! | GGGATTTTACAGTCATCTTA+AGG | - | chr5_1:768255-768274 | None:intergenic | 35.0% |
| !! | TCTTTCTCTTTTTGGATTGG+GGG | + | chr5_1:768288-768307 | Msa0709630:intron | 35.0% |
| ! | AGTAGGTAGGTTCTTTTGTA+TGG | + | chr5_1:768327-768346 | Msa0709630:intron | 35.0% |
| ! | TAGGTTCTTTTGTATGGTTG+TGG | + | chr5_1:768333-768352 | Msa0709630:intron | 35.0% |
| AGACTGCAAGCAATATTTAG+AGG | + | chr5_1:768604-768623 | Msa0709630:CDS | 35.0% | |
| TGATTCTGTTAAGCTTGTAG+AGG | + | chr5_1:768774-768793 | Msa0709630:CDS | 35.0% | |
| TCAACACTTAATTACCTGTG+TGG | - | chr5_1:769025-769044 | None:intergenic | 35.0% | |
| !!! | GAAAAGAGACACTGATTTTG+TGG | - | chr5_1:769139-769158 | None:intergenic | 35.0% |
| ATCATCTTCGACTTTAAGCT+CGG | + | chr5_1:769350-769369 | Msa0709630:CDS | 35.0% | |
| TCAAATTCATGTAGCTAGGT+AGG | - | chr5_1:769464-769483 | None:intergenic | 35.0% | |
| TCTGTCAAATTCATGTAGCT+AGG | - | chr5_1:769468-769487 | None:intergenic | 35.0% | |
| CTGACCCTTCAGTTAATTTA+TGG | + | chr5_1:769622-769641 | Msa0709630:CDS | 35.0% | |
| CCCTTCAGTTAATTTATGGA+AGG | + | chr5_1:769626-769645 | Msa0709630:CDS | 35.0% | |
| ! | TGATAATAACTTGCCCTTAG+AGG | - | chr5_1:769666-769685 | None:intergenic | 35.0% |
| CTTTCACTCAATCAATACAG+CGG | + | chr5_1:769833-769852 | Msa0709630:three_prime_UTR | 35.0% | |
| ! | GTTAGCCACTTTCTCATAAA+TGG | - | chr5_1:769861-769880 | None:intergenic | 35.0% |
| TAATCCAAAGCTATGTCTGT+GGG | - | chr5_1:770014-770033 | None:intergenic | 35.0% | |
| TTAATCCAAAGCTATGTCTG+TGG | - | chr5_1:770015-770034 | None:intergenic | 35.0% | |
| AGGGTTGTGTTGTGAAATTG+GGG | - | chr5_1:767216-767235 | None:intergenic | 40.0% | |
| GTAGGGTTGTGTTGTGAAAT+TGG | - | chr5_1:767218-767237 | None:intergenic | 40.0% | |
| ! | CCGATTTTTGCAGAGATTGT+AGG | - | chr5_1:767236-767255 | None:intergenic | 40.0% |
| ! | TTTTCTCCAATGGGTGTTTC+TGG | + | chr5_1:767259-767278 | Msa0709630:exon | 40.0% |
| ! | CATTTTCCAGAAACACCCAT+TGG | - | chr5_1:767268-767287 | None:intergenic | 40.0% |
| !! | CAATGGGTGTTTCTGGAAAA+TGG | + | chr5_1:767266-767285 | Msa0709630:exon | 40.0% |
| TCTTCAACCATCAAGAAGAC+TGG | + | chr5_1:767481-767500 | Msa0709630:CDS | 40.0% | |
| AGATTTCATCCTTATCAGGC+AGG | + | chr5_1:767582-767601 | Msa0709630:CDS | 40.0% | |
| CCCCAATAAAGGAAAAAAGG+GGG | - | chr5_1:767880-767899 | None:intergenic | 40.0% | |
| !!! | CCCCCTTTTTTCCTTTATTG+GGG | + | chr5_1:767877-767896 | Msa0709630:intron | 40.0% |
| TGGTTATGGTAATATGCCAG+GGG | + | chr5_1:767932-767951 | Msa0709630:intron | 40.0% | |
| AGTTATGCACTATATTCCCC+TGG | - | chr5_1:767951-767970 | None:intergenic | 40.0% | |
| !! | AAGAGCTTTGAGAGCATTGA+GGG | + | chr5_1:768573-768592 | Msa0709630:CDS | 40.0% |
| TGCAAGCAATATTTAGAGGC+AGG | + | chr5_1:768608-768627 | Msa0709630:CDS | 40.0% | |
| AACAAGCAGCTGTTACTCTA+AGG | + | chr5_1:768641-768660 | Msa0709630:CDS | 40.0% | |
| AATGTGAGGAAATCTCCAGA+AGG | + | chr5_1:768709-768728 | Msa0709630:CDS | 40.0% | |
| CAAGCTTAACAGAATCAGCA+TGG | - | chr5_1:768771-768790 | None:intergenic | 40.0% | |
| TTAACTTCATCTGCAGTTCC+AGG | - | chr5_1:768937-768956 | None:intergenic | 40.0% | |
| AAGCTAAGAATGAGGCAAGA+AGG | + | chr5_1:768961-768980 | Msa0709630:CDS | 40.0% | |
| AACCATGACAACAAGAGCTT+AGG | + | chr5_1:769171-769190 | Msa0709630:CDS | 40.0% | |
| ! | TTCCTAAGCTCTTGTTGTCA+TGG | - | chr5_1:769176-769195 | None:intergenic | 40.0% |
| GAGCTTAAAGTCGAAGATGA+TGG | - | chr5_1:769351-769370 | None:intergenic | 40.0% | |
| !! | TCTTTTTCCTCTGTTGCTTC+TGG | - | chr5_1:769435-769454 | None:intergenic | 40.0% |
| AGGCTAAGCTCAAAACTTAC+AGG | + | chr5_1:769496-769515 | Msa0709630:CDS | 40.0% | |
| TCACTGTGTCAAGATGACAA+TGG | - | chr5_1:769773-769792 | None:intergenic | 40.0% | |
| CACAGTGAGATGAACTGATT+TGG | + | chr5_1:769785-769804 | Msa0709630:three_prime_UTR | 40.0% | |
| AATCCAAAGCTATGTCTGTG+GGG | - | chr5_1:770013-770032 | None:intergenic | 40.0% | |
| GGTTGTGTTGTGAAATTGGG+GGG | - | chr5_1:767214-767233 | None:intergenic | 45.0% | |
| GGGTTGTGTTGTGAAATTGG+GGG | - | chr5_1:767215-767234 | None:intergenic | 45.0% | |
| TCAACCATCAAGAAGACTGG+TGG | + | chr5_1:767484-767503 | Msa0709630:CDS | 45.0% | |
| TCATCCTTATCAGGCAGGAA+TGG | + | chr5_1:767587-767606 | Msa0709630:CDS | 45.0% | |
| CATCCTTATCAGGCAGGAAT+GGG | + | chr5_1:767588-767607 | Msa0709630:CDS | 45.0% | |
| CTCGAAAAAGAGCCTGAATG+CGG | - | chr5_1:767621-767640 | None:intergenic | 45.0% | |
| !! | TTCTCTTTTTGGATTGGGGG+AGG | + | chr5_1:768291-768310 | Msa0709630:intron | 45.0% |
| !! | TCTCTTTTTGGATTGGGGGA+GGG | + | chr5_1:768292-768311 | Msa0709630:intron | 45.0% |
| GGTCAATGACTTCAGTAGGT+AGG | + | chr5_1:768314-768333 | Msa0709630:intron | 45.0% | |
| !! | TGTGGTGCTACTAATCTGTC+AGG | + | chr5_1:768351-768370 | Msa0709630:intron | 45.0% |
| !! | GTGGTGCTACTAATCTGTCA+GGG | + | chr5_1:768352-768371 | Msa0709630:intron | 45.0% |
| !! | TGGTGCTACTAATCTGTCAG+GGG | + | chr5_1:768353-768372 | Msa0709630:intron | 45.0% |
| GCAGAAATATCAGCCACTCT+TGG | + | chr5_1:768439-768458 | Msa0709630:intron | 45.0% | |
| !! | GAAGAGCTTTGAGAGCATTG+AGG | + | chr5_1:768572-768591 | Msa0709630:CDS | 45.0% |
| ! | TCTAAGGTGTATGCAAGCTC+TGG | + | chr5_1:768657-768676 | Msa0709630:CDS | 45.0% |
| ! | GTGTATGCAAGCTCTGGTTA+GGG | + | chr5_1:768663-768682 | Msa0709630:CDS | 45.0% |
| CAAGGATGGTGTGAAATTCC+TGG | + | chr5_1:768916-768935 | Msa0709630:CDS | 45.0% | |
| CATTGCTCTATCCCTCTTGA+TGG | - | chr5_1:768989-769008 | None:intergenic | 45.0% | |
| CATCAAGAGGGATAGAGCAA+TGG | + | chr5_1:768987-769006 | Msa0709630:CDS | 45.0% | |
| !! | GAAATAGCTTGTTAGAGCGC+TGG | + | chr5_1:769193-769212 | Msa0709630:CDS | 45.0% |
| TGGCAAACAAACCATGTCCA+TGG | + | chr5_1:769217-769236 | Msa0709630:CDS | 45.0% | |
| GGCAAACAAACCATGTCCAT+GGG | + | chr5_1:769218-769237 | Msa0709630:CDS | 45.0% | |
| TCACTCTTCCTGCTTGAGAT+TGG | - | chr5_1:769249-769268 | None:intergenic | 45.0% | |
| GAAGGAATGGTGTGACAACT+AGG | + | chr5_1:769295-769314 | Msa0709630:CDS | 45.0% | |
| ATCTATGCCAGAAGCAACAG+AGG | + | chr5_1:769425-769444 | Msa0709630:CDS | 45.0% | |
| GAGTTCGAAGAGACTCGTAA+TGG | + | chr5_1:769530-769549 | Msa0709630:CDS | 45.0% | |
| ATCGTTGTGCAACACCTCTA+AGG | + | chr5_1:769649-769668 | Msa0709630:CDS | 45.0% | |
| TCGTTGTGCAACACCTCTAA+GGG | + | chr5_1:769650-769669 | Msa0709630:CDS | 45.0% | |
| !! | CGGTGCCATTTATGAGAAAG+TGG | + | chr5_1:769853-769872 | Msa0709630:three_prime_UTR | 45.0% |
| AATCCCCACAGACATAGCTT+TGG | + | chr5_1:770007-770026 | Msa0709630:three_prime_UTR | 45.0% | |
| AGCACCACCAGTCTTCTTGA+TGG | - | chr5_1:767491-767510 | None:intergenic | 50.0% | |
| !! | AGCAGCTGCAGTATCGGTAA+TGG | - | chr5_1:767533-767552 | None:intergenic | 50.0% |
| AGCAACAGCAGCTGCAGTAT+CGG | - | chr5_1:767539-767558 | None:intergenic | 50.0% | |
| !!! | GGCTCTTTTTCGAGCCTTCT+TGG | + | chr5_1:767627-767646 | Msa0709630:CDS | 50.0% |
| !! | CTCTTTTTGGATTGGGGGAG+GGG | + | chr5_1:768293-768312 | Msa0709630:intron | 50.0% |
| GAGGGGTCAATGACTTCAGT+AGG | + | chr5_1:768310-768329 | Msa0709630:intron | 50.0% | |
| !! | TTTGAGAGCATTGAGGGCAG+TGG | + | chr5_1:768579-768598 | Msa0709630:CDS | 50.0% |
| ! | GGTGTATGCAAGCTCTGGTT+AGG | + | chr5_1:768662-768681 | Msa0709630:CDS | 50.0% |
| GTGTGAGAGCTAGGAATGTG+AGG | + | chr5_1:768695-768714 | Msa0709630:CDS | 50.0% | |
| !! | TGCTGCACTGCTTTTCCTTC+TGG | - | chr5_1:768727-768746 | None:intergenic | 50.0% |
| CAGAATCAGCATGGTTGCGA+TGG | - | chr5_1:768762-768781 | None:intergenic | 50.0% | |
| !! | GCAAGAAGGTGCCATCAAGA+GGG | + | chr5_1:768975-768994 | Msa0709630:CDS | 50.0% |
| GGCATACTCTCTATCCACAC+AGG | + | chr5_1:769008-769027 | Msa0709630:CDS | 50.0% | |
| !! | TAGCTTGTTAGAGCGCTGGA+TGG | + | chr5_1:769197-769216 | Msa0709630:CDS | 50.0% |
| ATTGGACTCTCCCATGGACA+TGG | - | chr5_1:769231-769250 | None:intergenic | 50.0% | |
| CTTGAGATTGGACTCTCCCA+TGG | - | chr5_1:769237-769256 | None:intergenic | 50.0% | |
| GCTATGTCTGTGGGGATTAC+AGG | - | chr5_1:770005-770024 | None:intergenic | 50.0% | |
| CAGCCCATTCCTGCCTGATA+AGG | - | chr5_1:767594-767613 | None:intergenic | 55.0% | |
| ! | ATGGGCTGCTATCCGCATTC+AGG | + | chr5_1:767606-767625 | Msa0709630:CDS | 55.0% |
| ! | GCAAGCTCTGGTTAGGGTTC+AGG | + | chr5_1:768669-768688 | Msa0709630:CDS | 55.0% |
| TTCAGGCACGTGTGAGAGCT+AGG | + | chr5_1:768686-768705 | Msa0709630:CDS | 55.0% | |
| !! | GGCAAGAAGGTGCCATCAAG+AGG | + | chr5_1:768974-768993 | Msa0709630:CDS | 55.0% |
| GGGAGAGTCCAATCTCAAGC+AGG | + | chr5_1:769238-769257 | Msa0709630:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_1 | gene | 767133 | 770084 | 767133 | ID=Msa0709630;Name=Msa0709630 |
| chr5_1 | mRNA | 767133 | 770084 | 767133 | ID=Msa0709630-mRNA-1;Parent=Msa0709630;Name=Msa0709630-mRNA-1;_AED=0.07;_eAED=0.07;_QI=135|1|1|1|1|1|5|377|413 |
| chr5_1 | exon | 767133 | 767324 | 767133 | ID=Msa0709630-mRNA-1:exon:329;Parent=Msa0709630-mRNA-1 |
| chr5_1 | exon | 767409 | 767648 | 767409 | ID=Msa0709630-mRNA-1:exon:330;Parent=Msa0709630-mRNA-1 |
| chr5_1 | exon | 768568 | 768795 | 768568 | ID=Msa0709630-mRNA-1:exon:331;Parent=Msa0709630-mRNA-1 |
| chr5_1 | exon | 768916 | 769029 | 768916 | ID=Msa0709630-mRNA-1:exon:332;Parent=Msa0709630-mRNA-1 |
| chr5_1 | exon | 769105 | 770084 | 769105 | ID=Msa0709630-mRNA-1:exon:333;Parent=Msa0709630-mRNA-1 |
| chr5_1 | five_prime_UTR | 767133 | 767267 | 767133 | ID=Msa0709630-mRNA-1:five_prime_utr;Parent=Msa0709630-mRNA-1 |
| chr5_1 | CDS | 767268 | 767324 | 767268 | ID=Msa0709630-mRNA-1:cds;Parent=Msa0709630-mRNA-1 |
| chr5_1 | CDS | 767409 | 767648 | 767409 | ID=Msa0709630-mRNA-1:cds;Parent=Msa0709630-mRNA-1 |
| chr5_1 | CDS | 768568 | 768795 | 768568 | ID=Msa0709630-mRNA-1:cds;Parent=Msa0709630-mRNA-1 |
| chr5_1 | CDS | 768916 | 769029 | 768916 | ID=Msa0709630-mRNA-1:cds;Parent=Msa0709630-mRNA-1 |
| chr5_1 | CDS | 769105 | 769707 | 769105 | ID=Msa0709630-mRNA-1:cds;Parent=Msa0709630-mRNA-1 |
| chr5_1 | three_prime_UTR | 769708 | 770084 | 769708 | ID=Msa0709630-mRNA-1:three_prime_utr;Parent=Msa0709630-mRNA-1 |
| Gene Sequence |
| Protein sequence |
