Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1292590 | XP_013446111.1 | 92.568 | 767 | 56 | 1 | 1 | 767 | 1 | 766 | 0.0 | 1387 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1292590 | sp|P0CB23|Y4862_ARATH | 47.018 | 570 | 286 | 5 | 1 | 569 | 1 | 555 | 3.33e-129 | 413 |
| Msa1292590 | sp|P0CB23|Y4862_ARATH | 42.991 | 214 | 78 | 2 | 481 | 666 | 634 | 831 | 2.20e-29 | 129 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1292590 | A0A072TTF3 | 92.568 | 767 | 56 | 1 | 1 | 767 | 1 | 766 | 0.0 | 1387 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0005890 | Msa1292590 | 0.843707 | 1.187331e-58 | -8.615850e-47 |
| Msa0017950 | Msa1292590 | 0.809474 | 1.858704e-50 | -8.615850e-47 |
| Msa0036870 | Msa1292590 | 0.802010 | 6.872635e-49 | -8.615850e-47 |
| Msa0048510 | Msa1292590 | 0.808114 | 3.631329e-50 | -8.615850e-47 |
| Msa0052480 | Msa1292590 | 0.804720 | 1.886183e-49 | -8.615850e-47 |
| Msa0081570 | Msa1292590 | 0.803876 | 2.827545e-49 | -8.615850e-47 |
| Msa0094780 | Msa1292590 | 0.839691 | 1.361606e-57 | -8.615850e-47 |
| Msa0097770 | Msa1292590 | 0.816124 | 6.501080e-52 | -8.615850e-47 |
| Msa0624900 | Msa1292590 | 0.827914 | 1.202359e-54 | -8.615850e-47 |
| Msa0658640 | Msa1292590 | 0.826734 | 2.305544e-54 | -8.615850e-47 |
| Msa0666700 | Msa1292590 | 0.802643 | 5.089707e-49 | -8.615850e-47 |
| Msa0703600 | Msa1292590 | 0.803719 | 3.047636e-49 | -8.615850e-47 |
| Msa0709200 | Msa1292590 | 0.805651 | 1.204564e-49 | -8.615850e-47 |
| Msa0709440 | Msa1292590 | 0.816205 | 6.235686e-52 | -8.615850e-47 |
| Msa0721080 | Msa1292590 | 0.826248 | 3.011019e-54 | -8.615850e-47 |
| Msa0735780 | Msa1292590 | 0.816941 | 4.264622e-52 | -8.615850e-47 |
| Msa0741220 | Msa1292590 | 0.812407 | 4.305652e-51 | -8.615850e-47 |
| Msa0761670 | Msa1292590 | 0.829857 | 4.070553e-55 | -8.615850e-47 |
| Msa0777750 | Msa1292590 | 0.810299 | 1.234836e-50 | -8.615850e-47 |
| Msa0795870 | Msa1292590 | 0.842242 | 2.914689e-58 | -8.615850e-47 |
| Msa0824450 | Msa1292590 | 0.834274 | 3.294276e-56 | -8.615850e-47 |
| Msa0830130 | Msa1292590 | 0.821999 | 2.994080e-53 | -8.615850e-47 |
| Msa0830460 | Msa1292590 | 0.824947 | 6.122538e-54 | -8.615850e-47 |
| Msa0833650 | Msa1292590 | 0.842187 | 3.013412e-58 | -8.615850e-47 |
| Msa0842070 | Msa1292590 | 0.801264 | 9.773543e-49 | -8.615850e-47 |
| Msa0133280 | Msa1292590 | 0.811673 | 6.223194e-51 | -8.615850e-47 |
| Msa0190570 | Msa1292590 | 0.821467 | 3.974719e-53 | -8.615850e-47 |
| Msa0213030 | Msa1292590 | 0.815234 | 1.026102e-51 | -8.615850e-47 |
| Msa0225860 | Msa1292590 | 0.847433 | 1.160174e-59 | -8.615850e-47 |
| Msa1226520 | Msa1292590 | 0.824978 | 6.022525e-54 | -8.615850e-47 |
| Msa1228200 | Msa1292590 | 0.816525 | 5.287230e-52 | -8.615850e-47 |
| Msa1263490 | Msa1292590 | 0.833152 | 6.285510e-56 | -8.615850e-47 |
| Msa1292590 | Msa1307630 | 0.816489 | 5.386860e-52 | -8.615850e-47 |
| Msa1292590 | Msa1320670 | 0.822409 | 2.406010e-53 | -8.615850e-47 |
| Msa1292590 | Msa1343170 | 0.828511 | 8.633922e-55 | -8.615850e-47 |
| Msa1292590 | Msa1343180 | 0.818328 | 2.076263e-52 | -8.615850e-47 |
| Msa1292590 | Msa1372040 | 0.805161 | 1.525514e-49 | -8.615850e-47 |
| Msa1292590 | Msa1387620 | 0.816285 | 5.982992e-52 | -8.615850e-47 |
| Msa1292590 | Msa1392580 | 0.813939 | 1.985389e-51 | -8.615850e-47 |
| Msa1292590 | Msa1397400 | 0.830159 | 3.435953e-55 | -8.615850e-47 |
| Msa1292590 | Msa1420950 | 0.817447 | 3.282752e-52 | -8.615850e-47 |
| Msa1292590 | Msa1437640 | 0.806268 | 8.931676e-50 | -8.615850e-47 |
| Msa1292590 | Msa1437930 | 0.803056 | 4.181363e-49 | -8.615850e-47 |
| Msa1292590 | Msa1440880 | 0.823933 | 1.060517e-53 | -8.615850e-47 |
| Msa1292590 | Msa1446810 | 0.808399 | 3.157273e-50 | -8.615850e-47 |
| Msa1292590 | Msa1449480 | 0.815172 | 1.059341e-51 | -8.615850e-47 |
| Msa1292590 | Msa1454140 | 0.803051 | 4.192539e-49 | -8.615850e-47 |
| Msa0428370 | Msa1292590 | 0.812811 | 3.512706e-51 | -8.615850e-47 |
| Msa0430300 | Msa1292590 | 0.813240 | 2.829913e-51 | -8.615850e-47 |
| Msa0474730 | Msa1292590 | 0.800655 | 1.301756e-48 | -8.615850e-47 |
| Msa0481890 | Msa1292590 | 0.811538 | 6.660223e-51 | -8.615850e-47 |
| Msa1019430 | Msa1292590 | 0.812486 | 4.139081e-51 | -8.615850e-47 |
| Msa1019470 | Msa1292590 | 0.827655 | 1.387682e-54 | -8.615850e-47 |
| Msa1037540 | Msa1292590 | 0.807747 | 4.345273e-50 | -8.615850e-47 |
| Msa1044470 | Msa1292590 | 0.800559 | 1.361380e-48 | -8.615850e-47 |
| Msa1081390 | Msa1292590 | 0.814514 | 1.481824e-51 | -8.615850e-47 |
| Msa1084530 | Msa1292590 | 0.811705 | 6.126444e-51 | -8.615850e-47 |
| Msa1103990 | Msa1292590 | 0.808344 | 3.242914e-50 | -8.615850e-47 |
| Msa0242590 | Msa1292590 | 0.822823 | 1.927513e-53 | -8.615850e-47 |
| Msa0260510 | Msa1292590 | 0.830736 | 2.482127e-55 | -8.615850e-47 |
| Msa0261340 | Msa1292590 | 0.802829 | 4.659091e-49 | -8.615850e-47 |
| Msa0271880 | Msa1292590 | 0.830387 | 3.023106e-55 | -8.615850e-47 |
| Msa0279690 | Msa1292590 | 0.809750 | 1.621531e-50 | -8.615850e-47 |
| Msa0280790 | Msa1292590 | 0.803176 | 3.950180e-49 | -8.615850e-47 |
| Msa0298470 | Msa1292590 | 0.845531 | 3.832091e-59 | -8.615850e-47 |
| Msa0300270 | Msa1292590 | 0.807299 | 5.409744e-50 | -8.615850e-47 |
| Msa0300860 | Msa1292590 | 0.801198 | 1.008255e-48 | -8.615850e-47 |
| Msa0310850 | Msa1292590 | 0.823877 | 1.093143e-53 | -8.615850e-47 |
| Msa0330380 | Msa1292590 | 0.846406 | 2.215370e-59 | -8.615850e-47 |
| Msa0337700 | Msa1292590 | 0.818130 | 2.301328e-52 | -8.615850e-47 |
| Msa0339500 | Msa1292590 | 0.805243 | 1.466599e-49 | -8.615850e-47 |
| Msa0340500 | Msa1292590 | 0.825692 | 4.081035e-54 | -8.615850e-47 |
| Msa1116220 | Msa1292590 | 0.801795 | 7.606698e-49 | -8.615850e-47 |
| Msa1125820 | Msa1292590 | 0.811302 | 7.494422e-51 | -8.615850e-47 |
| Msa1125990 | Msa1292590 | 0.814483 | 1.505858e-51 | -8.615850e-47 |
| Msa1132840 | Msa1292590 | 0.846072 | 2.732923e-59 | -8.615850e-47 |
| Msa1160920 | Msa1292590 | 0.809817 | 1.568572e-50 | -8.615850e-47 |
| Msa1171290 | Msa1292590 | 0.813909 | 2.015561e-51 | -8.615850e-47 |
| Msa1186020 | Msa1292590 | 0.806021 | 1.007023e-49 | -8.615850e-47 |
| Msa1192570 | Msa1292590 | 0.810959 | 8.893312e-51 | -8.615850e-47 |
| Msa1200890 | Msa1292590 | 0.817972 | 2.498778e-52 | -8.615850e-47 |
| Msa1208950 | Msa1292590 | 0.828458 | 8.892682e-55 | -8.615850e-47 |
| Msa1215870 | Msa1292590 | 0.813780 | 2.152335e-51 | -8.615850e-47 |
| Msa1223570 | Msa1292590 | 0.812427 | 4.262727e-51 | -8.615850e-47 |
| Msa0483100 | Msa1292590 | 0.823697 | 1.204600e-53 | -8.615850e-47 |
| Msa0534720 | Msa1292590 | 0.805830 | 1.104371e-49 | -8.615850e-47 |
| Msa0567170 | Msa1292590 | 0.812156 | 4.885792e-51 | -8.615850e-47 |
| Msa0573850 | Msa1292590 | 0.808273 | 3.358446e-50 | -8.615850e-47 |
| Msa0580370 | Msa1292590 | 0.844821 | 5.960434e-59 | -8.615850e-47 |
| Msa0581470 | Msa1292590 | 0.802250 | 6.133896e-49 | -8.615850e-47 |
| Msa0590830 | Msa1292590 | 0.801989 | 6.939200e-49 | -8.615850e-47 |
| Msa0902510 | Msa1292590 | 0.809193 | 2.135742e-50 | -8.615850e-47 |
| Msa0941170 | Msa1292590 | 0.822712 | 2.045322e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1292590 | MtrunA17_Chr8g0367551 | 92.568 | 767 | 56 | 1 | 1 | 767 | 1 | 766 | 0.0 | 1387 |
| Msa1292590 | MtrunA17_Chr2g0279621 | 33.384 | 656 | 371 | 7 | 5 | 646 | 6 | 609 | 2.56e-81 | 278 |
| Msa1292590 | MtrunA17_Chr5g0412231 | 52.966 | 236 | 95 | 3 | 206 | 441 | 95 | 314 | 1.17e-58 | 212 |
| Msa1292590 | MtrunA17_Chr5g0412231 | 51.754 | 114 | 52 | 2 | 1 | 114 | 1 | 111 | 1.27e-17 | 87.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1292590 | AT4G38062.1 | 47.018 | 570 | 286 | 5 | 1 | 569 | 1 | 555 | 3.38e-130 | 413 |
| Msa1292590 | AT4G38062.1 | 42.991 | 214 | 78 | 2 | 481 | 666 | 634 | 831 | 2.23e-30 | 129 |
Find 111 sgRNAs with CRISPR-Local
Find 246 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCTCTTTCACTTAGTTCTT+TGG | 0.160366 | 8_3:-48925403 | None:intergenic |
| CTTTCTTGCTAGACTTAAAT+TGG | 0.189601 | 8_3:-48925533 | None:intergenic |
| TGGAATTTGAATTGCAAATA+TGG | 0.213248 | 8_3:+48926672 | Msa1292590:CDS |
| CAGTTCTTTGTTGCATTCAT+TGG | 0.227093 | 8_3:-48926471 | None:intergenic |
| ATGATCAAGCTTCTCAGATT+TGG | 0.249781 | 8_3:-48925061 | None:intergenic |
| GAAGCATATGAGAAAGTTAA+AGG | 0.285304 | 8_3:+48925510 | Msa1292590:CDS |
| GATCCATCTCATCTTTATAA+TGG | 0.285408 | 8_3:-48926259 | None:intergenic |
| TGGACTTTGCTTCTTGTGTT+TGG | 0.299210 | 8_3:-48925041 | None:intergenic |
| CTTGTCATTTGCTTCCTCTA+AGG | 0.301965 | 8_3:-48925265 | None:intergenic |
| AAGTTGAAGTTTCAGAATTT+AGG | 0.309272 | 8_3:+48925709 | Msa1292590:CDS |
| TTTGGTTGACTTGTGCATTA+AGG | 0.325436 | 8_3:-48925023 | None:intergenic |
| CTTGCTCTAGCTTCTCAGTT+TGG | 0.327221 | 8_3:-48925872 | None:intergenic |
| GCTTTGATCGGTGCTCAAAA+AGG | 0.353306 | 8_3:+48926347 | Msa1292590:CDS |
| TGCTGGAATGAATTTGAAAA+AGG | 0.359780 | 8_3:+48927078 | Msa1292590:CDS |
| ATCCATCTCATCTTTATAAT+GGG | 0.391665 | 8_3:-48926258 | None:intergenic |
| TTGGTTGACTTGTGCATTAA+GGG | 0.397244 | 8_3:-48925022 | None:intergenic |
| CAATTCTTTGTTGGATCCAT+AGG | 0.398035 | 8_3:-48926420 | None:intergenic |
| CTTAGAAAGGGAAAATTTGT+TGG | 0.405002 | 8_3:+48926952 | Msa1292590:CDS |
| AGATGGCATGTTTCAGAAGT+TGG | 0.412491 | 8_3:+48925422 | Msa1292590:CDS |
| CTAGTTCTTTACGCATCAAA+TGG | 0.429303 | 8_3:-48926736 | None:intergenic |
| TGAGTGCTGCAATTCTTTGT+TGG | 0.432151 | 8_3:-48926429 | None:intergenic |
| AGACATTGCTATCAATGAAC+TGG | 0.433101 | 8_3:+48926622 | Msa1292590:CDS |
| ACTTTCTTTATCCTACTAGT+AGG | 0.441188 | 8_3:-48927148 | None:intergenic |
| AGGGTTGGTGTTGGCCTTAG+AGG | 0.442460 | 8_3:+48925251 | Msa1292590:CDS |
| CAACAAAACTGTCCTTAGAA+AGG | 0.448638 | 8_3:+48926939 | Msa1292590:CDS |
| AATTTGCGAAAGAAGTGAAA+TGG | 0.449523 | 8_3:+48926652 | Msa1292590:CDS |
| TCTGCAAAACCTTCTCTTCG+AGG | 0.466436 | 8_3:-48926553 | None:intergenic |
| TGATACAAGATCTCCATTCA+AGG | 0.467451 | 8_3:+48927183 | Msa1292590:CDS |
| TGATCATGAACTGCTTCAAA+AGG | 0.468351 | 8_3:+48925077 | Msa1292590:CDS |
| TGGAGATCTTGTATCAGAAA+TGG | 0.469819 | 8_3:-48927176 | None:intergenic |
| TTCAAGTTTCTCCTACTAGT+AGG | 0.481763 | 8_3:+48927137 | Msa1292590:CDS |
| TGTGGGAAGATGAGAAAAGA+GGG | 0.482510 | 8_3:+48925232 | Msa1292590:CDS |
| ATGAGGAAGATTGAGTCCTA+TGG | 0.483043 | 8_3:+48926404 | Msa1292590:CDS |
| AACTGCAGAACGAACTTGAT+AGG | 0.483851 | 8_3:+48926489 | Msa1292590:CDS |
| CGATGAAAAGATTAAAATGT+GGG | 0.487818 | 8_3:+48925215 | Msa1292590:CDS |
| TGAGACAAGGTTGTTGAATG+AGG | 0.490827 | 8_3:+48926175 | Msa1292590:CDS |
| TGTGATTGCAAAAGGCACTA+TGG | 0.490962 | 8_3:+48926889 | Msa1292590:CDS |
| CTACTGTTTAGCTCCTTGAA+TGG | 0.494111 | 8_3:-48927196 | None:intergenic |
| AGTTGGAAGATCAATTAAAG+TGG | 0.496552 | 8_3:+48925460 | Msa1292590:CDS |
| GAATTTCTGAGGCTCAGTTA+AGG | 0.498631 | 8_3:+48926231 | Msa1292590:CDS |
| TAAGGCTAGAGAGGCCGAAT+GGG | 0.500756 | 8_3:+48926034 | Msa1292590:CDS |
| TTCTATCCGAGAGTCCCATT+CGG | 0.501380 | 8_3:-48926048 | None:intergenic |
| TTTCTACATGAGCAAGAGCT+TGG | 0.502460 | 8_3:-48925668 | None:intergenic |
| CTACTCAACAAAGAGAAAGA+AGG | 0.503263 | 8_3:+48926281 | Msa1292590:CDS |
| AACAAAACTGTCCTTAGAAA+GGG | 0.503674 | 8_3:+48926940 | Msa1292590:CDS |
| TGATAGGTACAAGGAAATGC+TGG | 0.504708 | 8_3:+48926505 | Msa1292590:CDS |
| AGAGTGTTCCTTGACTCTTA+AGG | 0.507384 | 8_3:+48926016 | Msa1292590:CDS |
| CTACATGAGCAAGAGCTTGG+TGG | 0.508529 | 8_3:-48925665 | None:intergenic |
| TGTCGAGGAGCTTCAGAAAG+AGG | 0.510883 | 8_3:+48926820 | Msa1292590:CDS |
| TACTCAACAAAGAGAAAGAA+GGG | 0.513543 | 8_3:+48926282 | Msa1292590:CDS |
| GATGTCTCTCAAAGAACTAC+AGG | 0.514350 | 8_3:+48925911 | Msa1292590:CDS |
| AGCATTGTGGTACTCGCTAC+CGG | 0.515828 | 8_3:-48925748 | None:intergenic |
| GGTTTCGAAGCAGAAGTGTT+CGG | 0.517711 | 8_3:+48925356 | Msa1292590:CDS |
| GAATATGTGTCAGTCTGAGC+TGG | 0.520872 | 8_3:+48926088 | Msa1292590:CDS |
| GAGAGTGTTGTGATTGCAAA+AGG | 0.521173 | 8_3:+48926881 | Msa1292590:CDS |
| AAGCCTGAAAAGTTGTCTAT+CGG | 0.522014 | 8_3:+48925335 | Msa1292590:CDS |
| TTCATATAAACTCTTCGCCT+CGG | 0.523267 | 8_3:-48925112 | None:intergenic |
| CTTCTTGCACAAGTAGATGT+TGG | 0.531012 | 8_3:+48926767 | Msa1292590:CDS |
| CTTGCATATTCTCTTTCACA+TGG | 0.533808 | 8_3:-48927114 | None:intergenic |
| GGAAGAGCTTCAGATGGAGT+TGG | 0.539655 | 8_3:+48926130 | Msa1292590:CDS |
| AGCTTTGAGATGTTTGATGA+TGG | 0.539798 | 8_3:-48925166 | None:intergenic |
| GTTTATATGAAAATCTCAAA+GGG | 0.541215 | 8_3:+48925124 | Msa1292590:CDS |
| GGCAGAGAATCAAGAACAGA+AGG | 0.546884 | 8_3:+48925287 | Msa1292590:CDS |
| ATGAGCAAGAGCTTGGTGGC+AGG | 0.548176 | 8_3:-48925661 | None:intergenic |
| ATACTTGCTGAAAACAAAAG+AGG | 0.550163 | 8_3:+48925827 | Msa1292590:CDS |
| CTCTCTAGCCTTAAGAGTCA+AGG | 0.553491 | 8_3:-48926024 | None:intergenic |
| TCGATGAAAAGATTAAAATG+TGG | 0.554197 | 8_3:+48925214 | Msa1292590:CDS |
| CATCAAGCAAGAGAAAGATA+AGG | 0.559133 | 8_3:+48926796 | Msa1292590:CDS |
| AGATCAATTAAAGTGGAAGA+AGG | 0.559173 | 8_3:+48925467 | Msa1292590:CDS |
| TTAAGTCTAGCAAGAAAGAG+TGG | 0.559822 | 8_3:+48925538 | Msa1292590:CDS |
| TGCCCATTATAAAGATGAGA+TGG | 0.561343 | 8_3:+48926256 | Msa1292590:CDS |
| TCTCGGATAGAACAATTGAC+TGG | 0.567347 | 8_3:+48926059 | Msa1292590:CDS |
| ATGTGGGAAGATGAGAAAAG+AGG | 0.570580 | 8_3:+48925231 | Msa1292590:CDS |
| CTTGACTCTTAAGGCTAGAG+AGG | 0.571185 | 8_3:+48926025 | Msa1292590:CDS |
| CATGTTTCAGAAGTTGGAGG+AGG | 0.572744 | 8_3:+48925428 | Msa1292590:CDS |
| GGAAGCTAAAATTGCAGCAG+TGG | 0.572850 | 8_3:+48926109 | Msa1292590:CDS |
| TTAAGGCTAGAGAGGCCGAA+TGG | 0.574406 | 8_3:+48926033 | Msa1292590:CDS |
| GAGAGGCCGAATGGGACTCT+CGG | 0.575986 | 8_3:+48926042 | Msa1292590:CDS |
| AGCAAGAAAATCAAGAGTTG+AGG | 0.579298 | 8_3:+48925889 | Msa1292590:CDS |
| ATTCAACAACCTTGTCTCAA+CGG | 0.580172 | 8_3:-48926171 | None:intergenic |
| TCAGCGGATCCTCGAAGAGA+AGG | 0.582418 | 8_3:+48926544 | Msa1292590:CDS |
| GAAGCTCAAATTCAAGAAGC+AGG | 0.583273 | 8_3:+48925933 | Msa1292590:CDS |
| CATATTCGCAGTCGAAGTTG+AGG | 0.584722 | 8_3:+48925961 | Msa1292590:CDS |
| AGTTTATATGAAAATCTCAA+AGG | 0.588116 | 8_3:+48925123 | Msa1292590:CDS |
| AGGCTGCAGCTTGATAATGC+CGG | 0.588214 | 8_3:+48925729 | Msa1292590:CDS |
| TAGCAAGAAAGAGTGGGAGA+TGG | 0.589935 | 8_3:+48925545 | Msa1292590:CDS |
| AGAGAAAGATAAGGCTGTCG+AGG | 0.591590 | 8_3:+48926805 | Msa1292590:CDS |
| ATTCGATAGCCGTTGAGACA+AGG | 0.594810 | 8_3:+48926162 | Msa1292590:CDS |
| TAAGTCTAGCAAGAAAGAGT+GGG | 0.595787 | 8_3:+48925539 | Msa1292590:CDS |
| TGAGAAAAGAGGGTTGGTGT+TGG | 0.596204 | 8_3:+48925242 | Msa1292590:CDS |
| GAGGGACATGTTGAGAAGCA+TGG | 0.610311 | 8_3:+48927033 | Msa1292590:CDS |
| TGGCATGTTTCAGAAGTTGG+AGG | 0.611430 | 8_3:+48925425 | Msa1292590:CDS |
| AAAGAACTAAGTGAAAGAGA+TGG | 0.616970 | 8_3:+48925405 | Msa1292590:CDS |
| GTTGAAACAAGGAATTTCTG+AGG | 0.617749 | 8_3:+48926220 | Msa1292590:CDS |
| AGCTAAACAGTAGTTGCTAG+AGG | 0.620699 | 8_3:+48927206 | Msa1292590:CDS |
| GAACGAACTTGATAGGTACA+AGG | 0.621080 | 8_3:+48926496 | Msa1292590:CDS |
| AGCTGAGATTGAGAAACTCA+AGG | 0.627102 | 8_3:+48924954 | Msa1292590:CDS |
| AAATGCTGGAAGAATCAACT+AGG | 0.629687 | 8_3:+48926519 | Msa1292590:CDS |
| TAATGCAGACACTCAACTGA+GGG | 0.630553 | 8_3:+48927015 | Msa1292590:CDS |
| AGAAAGCAACATGTTTGATG+AGG | 0.639533 | 8_3:+48926387 | Msa1292590:CDS |
| TCATGAACTGCTTCAAAAGG+CGG | 0.644322 | 8_3:+48925080 | Msa1292590:CDS |
| AGCAGTGGAAGAGCTTCAGA+TGG | 0.644604 | 8_3:+48926124 | Msa1292590:CDS |
| CTTAGAGGAAGCAAATGACA+AGG | 0.650055 | 8_3:+48925266 | Msa1292590:CDS |
| GGAAGATGAGAAAAGAGGGT+TGG | 0.656830 | 8_3:+48925236 | Msa1292590:CDS |
| ATGAAAGATGATGCTTTGAT+CGG | 0.659943 | 8_3:+48926335 | Msa1292590:CDS |
| CTAATGCAGACACTCAACTG+AGG | 0.666435 | 8_3:+48927014 | Msa1292590:CDS |
| AAGAATCAACTAGGTGTCAG+CGG | 0.678694 | 8_3:+48926528 | Msa1292590:CDS |
| ACTCAACAAAGAGAAAGAAG+GGG | 0.682960 | 8_3:+48926283 | Msa1292590:CDS |
| AAAGGCGGACGAAATTGCCG+AGG | 0.683072 | 8_3:+48925095 | Msa1292590:CDS |
| GGACATGTTGAGAAGCATGG+AGG | 0.719760 | 8_3:+48927036 | Msa1292590:CDS |
| ATGCTGCTAGTGTTGAAACA+AGG | 0.727210 | 8_3:+48926209 | Msa1292590:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AGTTTATATGAAAATCTCAA+AGG | + | chr8_3:48925123-48925142 | Msa1292590:CDS | 20.0% |
| !! | GTTTATATGAAAATCTCAAA+GGG | + | chr8_3:48925124-48925143 | Msa1292590:CDS | 20.0% |
| !!! | TTGTTCTAAATTTTTAAGCT+TGG | - | chr8_3:48925988-48926007 | None:intergenic | 20.0% |
| !! | AGTTTATATGAAAATCTCAA+AGG | + | chr8_3:48925123-48925142 | Msa1292590:CDS | 20.0% |
| !! | GTTTATATGAAAATCTCAAA+GGG | + | chr8_3:48925124-48925143 | Msa1292590:CDS | 20.0% |
| !!! | TTGTTCTAAATTTTTAAGCT+TGG | - | chr8_3:48925988-48926007 | None:intergenic | 20.0% |
| ! | TCGATGAAAAGATTAAAATG+TGG | + | chr8_3:48925214-48925233 | Msa1292590:CDS | 25.0% |
| ! | CGATGAAAAGATTAAAATGT+GGG | + | chr8_3:48925215-48925234 | Msa1292590:CDS | 25.0% |
| ! | AAGTTGAAGTTTCAGAATTT+AGG | + | chr8_3:48925709-48925728 | Msa1292590:CDS | 25.0% |
| ! | ATCCATCTCATCTTTATAAT+GGG | - | chr8_3:48926261-48926280 | None:intergenic | 25.0% |
| ! | TGGAATTTGAATTGCAAATA+TGG | + | chr8_3:48926672-48926691 | Msa1292590:CDS | 25.0% |
| ! | TCGATGAAAAGATTAAAATG+TGG | + | chr8_3:48925214-48925233 | Msa1292590:CDS | 25.0% |
| ! | CGATGAAAAGATTAAAATGT+GGG | + | chr8_3:48925215-48925234 | Msa1292590:CDS | 25.0% |
| ! | AAGTTGAAGTTTCAGAATTT+AGG | + | chr8_3:48925709-48925728 | Msa1292590:CDS | 25.0% |
| ! | ATCCATCTCATCTTTATAAT+GGG | - | chr8_3:48926261-48926280 | None:intergenic | 25.0% |
| ! | TGGAATTTGAATTGCAAATA+TGG | + | chr8_3:48926672-48926691 | Msa1292590:CDS | 25.0% |
| ! | ATCTCTTTCACTTAGTTCTT+TGG | - | chr8_3:48925406-48925425 | None:intergenic | 30.0% |
| AAAGAACTAAGTGAAAGAGA+TGG | + | chr8_3:48925405-48925424 | Msa1292590:CDS | 30.0% | |
| AGTTGGAAGATCAATTAAAG+TGG | + | chr8_3:48925460-48925479 | Msa1292590:CDS | 30.0% | |
| AGATCAATTAAAGTGGAAGA+AGG | + | chr8_3:48925467-48925486 | Msa1292590:CDS | 30.0% | |
| GAAGCATATGAGAAAGTTAA+AGG | + | chr8_3:48925510-48925529 | Msa1292590:CDS | 30.0% | |
| CTTTCTTGCTAGACTTAAAT+TGG | - | chr8_3:48925536-48925555 | None:intergenic | 30.0% | |
| ! | ATACTTGCTGAAAACAAAAG+AGG | + | chr8_3:48925827-48925846 | Msa1292590:CDS | 30.0% |
| GATCCATCTCATCTTTATAA+TGG | - | chr8_3:48926262-48926281 | None:intergenic | 30.0% | |
| TACTCAACAAAGAGAAAGAA+GGG | + | chr8_3:48926282-48926301 | Msa1292590:CDS | 30.0% | |
| ATGAAAGATGATGCTTTGAT+CGG | + | chr8_3:48926335-48926354 | Msa1292590:CDS | 30.0% | |
| AATTTGCGAAAGAAGTGAAA+TGG | + | chr8_3:48926652-48926671 | Msa1292590:CDS | 30.0% | |
| AACAAAACTGTCCTTAGAAA+GGG | + | chr8_3:48926940-48926959 | Msa1292590:CDS | 30.0% | |
| ! | CAACAAATTTTCCCTTTCTA+AGG | - | chr8_3:48926954-48926973 | None:intergenic | 30.0% |
| CTTAGAAAGGGAAAATTTGT+TGG | + | chr8_3:48926952-48926971 | Msa1292590:CDS | 30.0% | |
| !!! | AATTTGTTGGCTTTTGTTCA+AGG | + | chr8_3:48926965-48926984 | Msa1292590:CDS | 30.0% |
| !!! | ATTTGTTGGCTTTTGTTCAA+GGG | + | chr8_3:48926966-48926985 | Msa1292590:CDS | 30.0% |
| TGCTGGAATGAATTTGAAAA+AGG | + | chr8_3:48927078-48927097 | Msa1292590:CDS | 30.0% | |
| ACTTTCTTTATCCTACTAGT+AGG | - | chr8_3:48927151-48927170 | None:intergenic | 30.0% | |
| ! | ATCTCTTTCACTTAGTTCTT+TGG | - | chr8_3:48925406-48925425 | None:intergenic | 30.0% |
| AAAGAACTAAGTGAAAGAGA+TGG | + | chr8_3:48925405-48925424 | Msa1292590:CDS | 30.0% | |
| AGTTGGAAGATCAATTAAAG+TGG | + | chr8_3:48925460-48925479 | Msa1292590:CDS | 30.0% | |
| AGATCAATTAAAGTGGAAGA+AGG | + | chr8_3:48925467-48925486 | Msa1292590:CDS | 30.0% | |
| GAAGCATATGAGAAAGTTAA+AGG | + | chr8_3:48925510-48925529 | Msa1292590:CDS | 30.0% | |
| CTTTCTTGCTAGACTTAAAT+TGG | - | chr8_3:48925536-48925555 | None:intergenic | 30.0% | |
| ! | ATACTTGCTGAAAACAAAAG+AGG | + | chr8_3:48925827-48925846 | Msa1292590:CDS | 30.0% |
| GATCCATCTCATCTTTATAA+TGG | - | chr8_3:48926262-48926281 | None:intergenic | 30.0% | |
| TACTCAACAAAGAGAAAGAA+GGG | + | chr8_3:48926282-48926301 | Msa1292590:CDS | 30.0% | |
| ATGAAAGATGATGCTTTGAT+CGG | + | chr8_3:48926335-48926354 | Msa1292590:CDS | 30.0% | |
| AATTTGCGAAAGAAGTGAAA+TGG | + | chr8_3:48926652-48926671 | Msa1292590:CDS | 30.0% | |
| AACAAAACTGTCCTTAGAAA+GGG | + | chr8_3:48926940-48926959 | Msa1292590:CDS | 30.0% | |
| ! | CAACAAATTTTCCCTTTCTA+AGG | - | chr8_3:48926954-48926973 | None:intergenic | 30.0% |
| CTTAGAAAGGGAAAATTTGT+TGG | + | chr8_3:48926952-48926971 | Msa1292590:CDS | 30.0% | |
| !!! | AATTTGTTGGCTTTTGTTCA+AGG | + | chr8_3:48926965-48926984 | Msa1292590:CDS | 30.0% |
| !!! | ATTTGTTGGCTTTTGTTCAA+GGG | + | chr8_3:48926966-48926985 | Msa1292590:CDS | 30.0% |
| TGCTGGAATGAATTTGAAAA+AGG | + | chr8_3:48927078-48927097 | Msa1292590:CDS | 30.0% | |
| ACTTTCTTTATCCTACTAGT+AGG | - | chr8_3:48927151-48927170 | None:intergenic | 30.0% | |
| GGAAAAAGTTTATGAAGAGC+TGG | + | chr8_3:48924921-48924940 | Msa1292590:CDS | 35.0% | |
| !! | TTGGTTGACTTGTGCATTAA+GGG | - | chr8_3:48925025-48925044 | None:intergenic | 35.0% |
| !! | TTTGGTTGACTTGTGCATTA+AGG | - | chr8_3:48925026-48925045 | None:intergenic | 35.0% |
| ATGATCAAGCTTCTCAGATT+TGG | - | chr8_3:48925064-48925083 | None:intergenic | 35.0% | |
| TGATCATGAACTGCTTCAAA+AGG | + | chr8_3:48925077-48925096 | Msa1292590:CDS | 35.0% | |
| TTCATATAAACTCTTCGCCT+CGG | - | chr8_3:48925115-48925134 | None:intergenic | 35.0% | |
| !! | AGCTTTGAGATGTTTGATGA+TGG | - | chr8_3:48925169-48925188 | None:intergenic | 35.0% |
| AAGCCTGAAAAGTTGTCTAT+CGG | + | chr8_3:48925335-48925354 | Msa1292590:CDS | 35.0% | |
| ! | AAACCGATAGACAACTTTTC+AGG | - | chr8_3:48925341-48925360 | None:intergenic | 35.0% |
| TTAAGTCTAGCAAGAAAGAG+TGG | + | chr8_3:48925538-48925557 | Msa1292590:CDS | 35.0% | |
| TAAGTCTAGCAAGAAAGAGT+GGG | + | chr8_3:48925539-48925558 | Msa1292590:CDS | 35.0% | |
| AGCAAGAAAATCAAGAGTTG+AGG | + | chr8_3:48925889-48925908 | Msa1292590:CDS | 35.0% | |
| ATTCAACAACCTTGTCTCAA+CGG | - | chr8_3:48926174-48926193 | None:intergenic | 35.0% | |
| GTTGAAACAAGGAATTTCTG+AGG | + | chr8_3:48926220-48926239 | Msa1292590:CDS | 35.0% | |
| TGCCCATTATAAAGATGAGA+TGG | + | chr8_3:48926256-48926275 | Msa1292590:CDS | 35.0% | |
| CTACTCAACAAAGAGAAAGA+AGG | + | chr8_3:48926281-48926300 | Msa1292590:CDS | 35.0% | |
| ACTCAACAAAGAGAAAGAAG+GGG | + | chr8_3:48926283-48926302 | Msa1292590:CDS | 35.0% | |
| ! | TTTTCAACTGATGAAGCAGT+TGG | + | chr8_3:48926310-48926329 | Msa1292590:CDS | 35.0% |
| AGAAAGCAACATGTTTGATG+AGG | + | chr8_3:48926387-48926406 | Msa1292590:CDS | 35.0% | |
| CAATTCTTTGTTGGATCCAT+AGG | - | chr8_3:48926423-48926442 | None:intergenic | 35.0% | |
| CAGTTCTTTGTTGCATTCAT+TGG | - | chr8_3:48926474-48926493 | None:intergenic | 35.0% | |
| AAATGCTGGAAGAATCAACT+AGG | + | chr8_3:48926519-48926538 | Msa1292590:CDS | 35.0% | |
| AGACATTGCTATCAATGAAC+TGG | + | chr8_3:48926622-48926641 | Msa1292590:CDS | 35.0% | |
| ! | CTAGTTCTTTACGCATCAAA+TGG | - | chr8_3:48926739-48926758 | None:intergenic | 35.0% |
| CATCAAGCAAGAGAAAGATA+AGG | + | chr8_3:48926796-48926815 | Msa1292590:CDS | 35.0% | |
| CAACAAAACTGTCCTTAGAA+AGG | + | chr8_3:48926939-48926958 | Msa1292590:CDS | 35.0% | |
| !!! | GAGGAATCTTTTGAGATTGA+TGG | + | chr8_3:48927055-48927074 | Msa1292590:CDS | 35.0% |
| CTTGCATATTCTCTTTCACA+TGG | - | chr8_3:48927117-48927136 | None:intergenic | 35.0% | |
| ! | TTCAAGTTTCTCCTACTAGT+AGG | + | chr8_3:48927137-48927156 | Msa1292590:CDS | 35.0% |
| TGGAGATCTTGTATCAGAAA+TGG | - | chr8_3:48927179-48927198 | None:intergenic | 35.0% | |
| TGATACAAGATCTCCATTCA+AGG | + | chr8_3:48927183-48927202 | Msa1292590:CDS | 35.0% | |
| GGAAAAAGTTTATGAAGAGC+TGG | + | chr8_3:48924921-48924940 | Msa1292590:CDS | 35.0% | |
| !! | TTGGTTGACTTGTGCATTAA+GGG | - | chr8_3:48925025-48925044 | None:intergenic | 35.0% |
| !! | TTTGGTTGACTTGTGCATTA+AGG | - | chr8_3:48925026-48925045 | None:intergenic | 35.0% |
| ATGATCAAGCTTCTCAGATT+TGG | - | chr8_3:48925064-48925083 | None:intergenic | 35.0% | |
| TGATCATGAACTGCTTCAAA+AGG | + | chr8_3:48925077-48925096 | Msa1292590:CDS | 35.0% | |
| TTCATATAAACTCTTCGCCT+CGG | - | chr8_3:48925115-48925134 | None:intergenic | 35.0% | |
| !! | AGCTTTGAGATGTTTGATGA+TGG | - | chr8_3:48925169-48925188 | None:intergenic | 35.0% |
| AAGCCTGAAAAGTTGTCTAT+CGG | + | chr8_3:48925335-48925354 | Msa1292590:CDS | 35.0% | |
| ! | AAACCGATAGACAACTTTTC+AGG | - | chr8_3:48925341-48925360 | None:intergenic | 35.0% |
| TTAAGTCTAGCAAGAAAGAG+TGG | + | chr8_3:48925538-48925557 | Msa1292590:CDS | 35.0% | |
| TAAGTCTAGCAAGAAAGAGT+GGG | + | chr8_3:48925539-48925558 | Msa1292590:CDS | 35.0% | |
| AGCAAGAAAATCAAGAGTTG+AGG | + | chr8_3:48925889-48925908 | Msa1292590:CDS | 35.0% | |
| ATTCAACAACCTTGTCTCAA+CGG | - | chr8_3:48926174-48926193 | None:intergenic | 35.0% | |
| GTTGAAACAAGGAATTTCTG+AGG | + | chr8_3:48926220-48926239 | Msa1292590:CDS | 35.0% | |
| TGCCCATTATAAAGATGAGA+TGG | + | chr8_3:48926256-48926275 | Msa1292590:CDS | 35.0% | |
| CTACTCAACAAAGAGAAAGA+AGG | + | chr8_3:48926281-48926300 | Msa1292590:CDS | 35.0% | |
| ACTCAACAAAGAGAAAGAAG+GGG | + | chr8_3:48926283-48926302 | Msa1292590:CDS | 35.0% | |
| ! | TTTTCAACTGATGAAGCAGT+TGG | + | chr8_3:48926310-48926329 | Msa1292590:CDS | 35.0% |
| AGAAAGCAACATGTTTGATG+AGG | + | chr8_3:48926387-48926406 | Msa1292590:CDS | 35.0% | |
| CAATTCTTTGTTGGATCCAT+AGG | - | chr8_3:48926423-48926442 | None:intergenic | 35.0% | |
| CAGTTCTTTGTTGCATTCAT+TGG | - | chr8_3:48926474-48926493 | None:intergenic | 35.0% | |
| AAATGCTGGAAGAATCAACT+AGG | + | chr8_3:48926519-48926538 | Msa1292590:CDS | 35.0% | |
| AGACATTGCTATCAATGAAC+TGG | + | chr8_3:48926622-48926641 | Msa1292590:CDS | 35.0% | |
| ! | CTAGTTCTTTACGCATCAAA+TGG | - | chr8_3:48926739-48926758 | None:intergenic | 35.0% |
| CATCAAGCAAGAGAAAGATA+AGG | + | chr8_3:48926796-48926815 | Msa1292590:CDS | 35.0% | |
| CAACAAAACTGTCCTTAGAA+AGG | + | chr8_3:48926939-48926958 | Msa1292590:CDS | 35.0% | |
| !!! | GAGGAATCTTTTGAGATTGA+TGG | + | chr8_3:48927055-48927074 | Msa1292590:CDS | 35.0% |
| CTTGCATATTCTCTTTCACA+TGG | - | chr8_3:48927117-48927136 | None:intergenic | 35.0% | |
| ! | TTCAAGTTTCTCCTACTAGT+AGG | + | chr8_3:48927137-48927156 | Msa1292590:CDS | 35.0% |
| TGGAGATCTTGTATCAGAAA+TGG | - | chr8_3:48927179-48927198 | None:intergenic | 35.0% | |
| TGATACAAGATCTCCATTCA+AGG | + | chr8_3:48927183-48927202 | Msa1292590:CDS | 35.0% | |
| AGCTGAGATTGAGAAACTCA+AGG | + | chr8_3:48924954-48924973 | Msa1292590:CDS | 40.0% | |
| TGGACTTTGCTTCTTGTGTT+TGG | - | chr8_3:48925044-48925063 | None:intergenic | 40.0% | |
| TCATGAACTGCTTCAAAAGG+CGG | + | chr8_3:48925080-48925099 | Msa1292590:CDS | 40.0% | |
| ATGTGGGAAGATGAGAAAAG+AGG | + | chr8_3:48925231-48925250 | Msa1292590:CDS | 40.0% | |
| TGTGGGAAGATGAGAAAAGA+GGG | + | chr8_3:48925232-48925251 | Msa1292590:CDS | 40.0% | |
| ! | CTTGTCATTTGCTTCCTCTA+AGG | - | chr8_3:48925268-48925287 | None:intergenic | 40.0% |
| CTTAGAGGAAGCAAATGACA+AGG | + | chr8_3:48925266-48925285 | Msa1292590:CDS | 40.0% | |
| AGATGGCATGTTTCAGAAGT+TGG | + | chr8_3:48925422-48925441 | Msa1292590:CDS | 40.0% | |
| TTTCTACATGAGCAAGAGCT+TGG | - | chr8_3:48925671-48925690 | None:intergenic | 40.0% | |
| GATGTCTCTCAAAGAACTAC+AGG | + | chr8_3:48925911-48925930 | Msa1292590:CDS | 40.0% | |
| GAAGCTCAAATTCAAGAAGC+AGG | + | chr8_3:48925933-48925952 | Msa1292590:CDS | 40.0% | |
| ! | AGAGTGTTCCTTGACTCTTA+AGG | + | chr8_3:48926016-48926035 | Msa1292590:CDS | 40.0% |
| TCTCGGATAGAACAATTGAC+TGG | + | chr8_3:48926059-48926078 | Msa1292590:CDS | 40.0% | |
| TGAGACAAGGTTGTTGAATG+AGG | + | chr8_3:48926175-48926194 | Msa1292590:CDS | 40.0% | |
| ! | ATGCTGCTAGTGTTGAAACA+AGG | + | chr8_3:48926209-48926228 | Msa1292590:CDS | 40.0% |
| !! | GAATTTCTGAGGCTCAGTTA+AGG | + | chr8_3:48926231-48926250 | Msa1292590:CDS | 40.0% |
| ATGAGGAAGATTGAGTCCTA+TGG | + | chr8_3:48926404-48926423 | Msa1292590:CDS | 40.0% | |
| ! | TGAGTGCTGCAATTCTTTGT+TGG | - | chr8_3:48926432-48926451 | None:intergenic | 40.0% |
| AACTGCAGAACGAACTTGAT+AGG | + | chr8_3:48926489-48926508 | Msa1292590:CDS | 40.0% | |
| GAACGAACTTGATAGGTACA+AGG | + | chr8_3:48926496-48926515 | Msa1292590:CDS | 40.0% | |
| TGATAGGTACAAGGAAATGC+TGG | + | chr8_3:48926505-48926524 | Msa1292590:CDS | 40.0% | |
| AAGAATCAACTAGGTGTCAG+CGG | + | chr8_3:48926528-48926547 | Msa1292590:CDS | 40.0% | |
| CTTCTTGCACAAGTAGATGT+TGG | + | chr8_3:48926767-48926786 | Msa1292590:CDS | 40.0% | |
| !! | TCAGAAAGAGGCTGTTTTGT+TGG | + | chr8_3:48926832-48926851 | Msa1292590:CDS | 40.0% |
| !! | GAGAGTGTTGTGATTGCAAA+AGG | + | chr8_3:48926881-48926900 | Msa1292590:CDS | 40.0% |
| !! | TGTGATTGCAAAAGGCACTA+TGG | + | chr8_3:48926889-48926908 | Msa1292590:CDS | 40.0% |
| ! | TGCATTTTCATTCAGCTCAC+AGG | - | chr8_3:48926921-48926940 | None:intergenic | 40.0% |
| TAATGCAGACACTCAACTGA+GGG | + | chr8_3:48927015-48927034 | Msa1292590:CDS | 40.0% | |
| !!! | TCTTTTGAGATTGATGGTGC+TGG | + | chr8_3:48927061-48927080 | Msa1292590:CDS | 40.0% |
| ! | CTACTGTTTAGCTCCTTGAA+TGG | - | chr8_3:48927199-48927218 | None:intergenic | 40.0% |
| AGCTGAGATTGAGAAACTCA+AGG | + | chr8_3:48924954-48924973 | Msa1292590:CDS | 40.0% | |
| TGGACTTTGCTTCTTGTGTT+TGG | - | chr8_3:48925044-48925063 | None:intergenic | 40.0% | |
| TCATGAACTGCTTCAAAAGG+CGG | + | chr8_3:48925080-48925099 | Msa1292590:CDS | 40.0% | |
| ATGTGGGAAGATGAGAAAAG+AGG | + | chr8_3:48925231-48925250 | Msa1292590:CDS | 40.0% | |
| TGTGGGAAGATGAGAAAAGA+GGG | + | chr8_3:48925232-48925251 | Msa1292590:CDS | 40.0% | |
| ! | CTTGTCATTTGCTTCCTCTA+AGG | - | chr8_3:48925268-48925287 | None:intergenic | 40.0% |
| CTTAGAGGAAGCAAATGACA+AGG | + | chr8_3:48925266-48925285 | Msa1292590:CDS | 40.0% | |
| AGATGGCATGTTTCAGAAGT+TGG | + | chr8_3:48925422-48925441 | Msa1292590:CDS | 40.0% | |
| TTTCTACATGAGCAAGAGCT+TGG | - | chr8_3:48925671-48925690 | None:intergenic | 40.0% | |
| GATGTCTCTCAAAGAACTAC+AGG | + | chr8_3:48925911-48925930 | Msa1292590:CDS | 40.0% | |
| GAAGCTCAAATTCAAGAAGC+AGG | + | chr8_3:48925933-48925952 | Msa1292590:CDS | 40.0% | |
| ! | AGAGTGTTCCTTGACTCTTA+AGG | + | chr8_3:48926016-48926035 | Msa1292590:CDS | 40.0% |
| TCTCGGATAGAACAATTGAC+TGG | + | chr8_3:48926059-48926078 | Msa1292590:CDS | 40.0% | |
| TGAGACAAGGTTGTTGAATG+AGG | + | chr8_3:48926175-48926194 | Msa1292590:CDS | 40.0% | |
| ! | ATGCTGCTAGTGTTGAAACA+AGG | + | chr8_3:48926209-48926228 | Msa1292590:CDS | 40.0% |
| !! | GAATTTCTGAGGCTCAGTTA+AGG | + | chr8_3:48926231-48926250 | Msa1292590:CDS | 40.0% |
| ATGAGGAAGATTGAGTCCTA+TGG | + | chr8_3:48926404-48926423 | Msa1292590:CDS | 40.0% | |
| ! | TGAGTGCTGCAATTCTTTGT+TGG | - | chr8_3:48926432-48926451 | None:intergenic | 40.0% |
| AACTGCAGAACGAACTTGAT+AGG | + | chr8_3:48926489-48926508 | Msa1292590:CDS | 40.0% | |
| GAACGAACTTGATAGGTACA+AGG | + | chr8_3:48926496-48926515 | Msa1292590:CDS | 40.0% | |
| TGATAGGTACAAGGAAATGC+TGG | + | chr8_3:48926505-48926524 | Msa1292590:CDS | 40.0% | |
| AAGAATCAACTAGGTGTCAG+CGG | + | chr8_3:48926528-48926547 | Msa1292590:CDS | 40.0% | |
| CTTCTTGCACAAGTAGATGT+TGG | + | chr8_3:48926767-48926786 | Msa1292590:CDS | 40.0% | |
| !! | TCAGAAAGAGGCTGTTTTGT+TGG | + | chr8_3:48926832-48926851 | Msa1292590:CDS | 40.0% |
| !! | GAGAGTGTTGTGATTGCAAA+AGG | + | chr8_3:48926881-48926900 | Msa1292590:CDS | 40.0% |
| !! | TGTGATTGCAAAAGGCACTA+TGG | + | chr8_3:48926889-48926908 | Msa1292590:CDS | 40.0% |
| ! | TGCATTTTCATTCAGCTCAC+AGG | - | chr8_3:48926921-48926940 | None:intergenic | 40.0% |
| TAATGCAGACACTCAACTGA+GGG | + | chr8_3:48927015-48927034 | Msa1292590:CDS | 40.0% | |
| !!! | TCTTTTGAGATTGATGGTGC+TGG | + | chr8_3:48927061-48927080 | Msa1292590:CDS | 40.0% |
| ! | CTACTGTTTAGCTCCTTGAA+TGG | - | chr8_3:48927199-48927218 | None:intergenic | 40.0% |
| GGAAGATGAGAAAAGAGGGT+TGG | + | chr8_3:48925236-48925255 | Msa1292590:CDS | 45.0% | |
| !! | TGAGAAAAGAGGGTTGGTGT+TGG | + | chr8_3:48925242-48925261 | Msa1292590:CDS | 45.0% |
| GGCAGAGAATCAAGAACAGA+AGG | + | chr8_3:48925287-48925306 | Msa1292590:CDS | 45.0% | |
| !! | GGTTTCGAAGCAGAAGTGTT+CGG | + | chr8_3:48925356-48925375 | Msa1292590:CDS | 45.0% |
| TGGCATGTTTCAGAAGTTGG+AGG | + | chr8_3:48925425-48925444 | Msa1292590:CDS | 45.0% | |
| CATGTTTCAGAAGTTGGAGG+AGG | + | chr8_3:48925428-48925447 | Msa1292590:CDS | 45.0% | |
| GGAGGAGGAAAAAGAGAAGT+TGG | + | chr8_3:48925443-48925462 | Msa1292590:CDS | 45.0% | |
| TAGCAAGAAAGAGTGGGAGA+TGG | + | chr8_3:48925545-48925564 | Msa1292590:CDS | 45.0% | |
| ! | CTTGCTCTAGCTTCTCAGTT+TGG | - | chr8_3:48925875-48925894 | None:intergenic | 45.0% |
| CATATTCGCAGTCGAAGTTG+AGG | + | chr8_3:48925961-48925980 | Msa1292590:CDS | 45.0% | |
| !! | CTCTCTAGCCTTAAGAGTCA+AGG | - | chr8_3:48926027-48926046 | None:intergenic | 45.0% |
| CTTGACTCTTAAGGCTAGAG+AGG | + | chr8_3:48926025-48926044 | Msa1292590:CDS | 45.0% | |
| TTCTATCCGAGAGTCCCATT+CGG | - | chr8_3:48926051-48926070 | None:intergenic | 45.0% | |
| GAATATGTGTCAGTCTGAGC+TGG | + | chr8_3:48926088-48926107 | Msa1292590:CDS | 45.0% | |
| GGAAGCTAAAATTGCAGCAG+TGG | + | chr8_3:48926109-48926128 | Msa1292590:CDS | 45.0% | |
| ATTCGATAGCCGTTGAGACA+AGG | + | chr8_3:48926162-48926181 | Msa1292590:CDS | 45.0% | |
| ! | GCTTTGATCGGTGCTCAAAA+AGG | + | chr8_3:48926347-48926366 | Msa1292590:CDS | 45.0% |
| TCTGCAAAACCTTCTCTTCG+AGG | - | chr8_3:48926556-48926575 | None:intergenic | 45.0% | |
| AGAGAAAGATAAGGCTGTCG+AGG | + | chr8_3:48926805-48926824 | Msa1292590:CDS | 45.0% | |
| CTAATGCAGACACTCAACTG+AGG | + | chr8_3:48927014-48927033 | Msa1292590:CDS | 45.0% | |
| GGAAGATGAGAAAAGAGGGT+TGG | + | chr8_3:48925236-48925255 | Msa1292590:CDS | 45.0% | |
| !! | TGAGAAAAGAGGGTTGGTGT+TGG | + | chr8_3:48925242-48925261 | Msa1292590:CDS | 45.0% |
| GGCAGAGAATCAAGAACAGA+AGG | + | chr8_3:48925287-48925306 | Msa1292590:CDS | 45.0% | |
| !! | GGTTTCGAAGCAGAAGTGTT+CGG | + | chr8_3:48925356-48925375 | Msa1292590:CDS | 45.0% |
| TGGCATGTTTCAGAAGTTGG+AGG | + | chr8_3:48925425-48925444 | Msa1292590:CDS | 45.0% | |
| CATGTTTCAGAAGTTGGAGG+AGG | + | chr8_3:48925428-48925447 | Msa1292590:CDS | 45.0% | |
| GGAGGAGGAAAAAGAGAAGT+TGG | + | chr8_3:48925443-48925462 | Msa1292590:CDS | 45.0% | |
| TAGCAAGAAAGAGTGGGAGA+TGG | + | chr8_3:48925545-48925564 | Msa1292590:CDS | 45.0% | |
| ! | CTTGCTCTAGCTTCTCAGTT+TGG | - | chr8_3:48925875-48925894 | None:intergenic | 45.0% |
| CATATTCGCAGTCGAAGTTG+AGG | + | chr8_3:48925961-48925980 | Msa1292590:CDS | 45.0% | |
| !! | CTCTCTAGCCTTAAGAGTCA+AGG | - | chr8_3:48926027-48926046 | None:intergenic | 45.0% |
| CTTGACTCTTAAGGCTAGAG+AGG | + | chr8_3:48926025-48926044 | Msa1292590:CDS | 45.0% | |
| TTCTATCCGAGAGTCCCATT+CGG | - | chr8_3:48926051-48926070 | None:intergenic | 45.0% | |
| GAATATGTGTCAGTCTGAGC+TGG | + | chr8_3:48926088-48926107 | Msa1292590:CDS | 45.0% | |
| GGAAGCTAAAATTGCAGCAG+TGG | + | chr8_3:48926109-48926128 | Msa1292590:CDS | 45.0% | |
| ATTCGATAGCCGTTGAGACA+AGG | + | chr8_3:48926162-48926181 | Msa1292590:CDS | 45.0% | |
| ! | GCTTTGATCGGTGCTCAAAA+AGG | + | chr8_3:48926347-48926366 | Msa1292590:CDS | 45.0% |
| TCTGCAAAACCTTCTCTTCG+AGG | - | chr8_3:48926556-48926575 | None:intergenic | 45.0% | |
| AGAGAAAGATAAGGCTGTCG+AGG | + | chr8_3:48926805-48926824 | Msa1292590:CDS | 45.0% | |
| CTAATGCAGACACTCAACTG+AGG | + | chr8_3:48927014-48927033 | Msa1292590:CDS | 45.0% | |
| CTACATGAGCAAGAGCTTGG+TGG | - | chr8_3:48925668-48925687 | None:intergenic | 50.0% | |
| !! | AGGCTGCAGCTTGATAATGC+CGG | + | chr8_3:48925729-48925748 | Msa1292590:CDS | 50.0% |
| AGCATTGTGGTACTCGCTAC+CGG | - | chr8_3:48925751-48925770 | None:intergenic | 50.0% | |
| CGAGCTGTAGTCTAGCATTG+TGG | - | chr8_3:48925764-48925783 | None:intergenic | 50.0% | |
| TTAAGGCTAGAGAGGCCGAA+TGG | + | chr8_3:48926033-48926052 | Msa1292590:CDS | 50.0% | |
| TAAGGCTAGAGAGGCCGAAT+GGG | + | chr8_3:48926034-48926053 | Msa1292590:CDS | 50.0% | |
| AGCAGTGGAAGAGCTTCAGA+TGG | + | chr8_3:48926124-48926143 | Msa1292590:CDS | 50.0% | |
| GGAAGAGCTTCAGATGGAGT+TGG | + | chr8_3:48926130-48926149 | Msa1292590:CDS | 50.0% | |
| TGTCGAGGAGCTTCAGAAAG+AGG | + | chr8_3:48926820-48926839 | Msa1292590:CDS | 50.0% | |
| GAGGGACATGTTGAGAAGCA+TGG | + | chr8_3:48927033-48927052 | Msa1292590:CDS | 50.0% | |
| ! | GGACATGTTGAGAAGCATGG+AGG | + | chr8_3:48927036-48927055 | Msa1292590:CDS | 50.0% |
| CTACATGAGCAAGAGCTTGG+TGG | - | chr8_3:48925668-48925687 | None:intergenic | 50.0% | |
| !! | AGGCTGCAGCTTGATAATGC+CGG | + | chr8_3:48925729-48925748 | Msa1292590:CDS | 50.0% |
| AGCATTGTGGTACTCGCTAC+CGG | - | chr8_3:48925751-48925770 | None:intergenic | 50.0% | |
| CGAGCTGTAGTCTAGCATTG+TGG | - | chr8_3:48925764-48925783 | None:intergenic | 50.0% | |
| TTAAGGCTAGAGAGGCCGAA+TGG | + | chr8_3:48926033-48926052 | Msa1292590:CDS | 50.0% | |
| TAAGGCTAGAGAGGCCGAAT+GGG | + | chr8_3:48926034-48926053 | Msa1292590:CDS | 50.0% | |
| AGCAGTGGAAGAGCTTCAGA+TGG | + | chr8_3:48926124-48926143 | Msa1292590:CDS | 50.0% | |
| GGAAGAGCTTCAGATGGAGT+TGG | + | chr8_3:48926130-48926149 | Msa1292590:CDS | 50.0% | |
| TGTCGAGGAGCTTCAGAAAG+AGG | + | chr8_3:48926820-48926839 | Msa1292590:CDS | 50.0% | |
| GAGGGACATGTTGAGAAGCA+TGG | + | chr8_3:48927033-48927052 | Msa1292590:CDS | 50.0% | |
| ! | GGACATGTTGAGAAGCATGG+AGG | + | chr8_3:48927036-48927055 | Msa1292590:CDS | 50.0% |
| AAAGGCGGACGAAATTGCCG+AGG | + | chr8_3:48925095-48925114 | Msa1292590:CDS | 55.0% | |
| !! | AGGGTTGGTGTTGGCCTTAG+AGG | + | chr8_3:48925251-48925270 | Msa1292590:CDS | 55.0% |
| ! | ATGAGCAAGAGCTTGGTGGC+AGG | - | chr8_3:48925664-48925683 | None:intergenic | 55.0% |
| TCAGCGGATCCTCGAAGAGA+AGG | + | chr8_3:48926544-48926563 | Msa1292590:CDS | 55.0% | |
| AAAGGCGGACGAAATTGCCG+AGG | + | chr8_3:48925095-48925114 | Msa1292590:CDS | 55.0% | |
| !! | AGGGTTGGTGTTGGCCTTAG+AGG | + | chr8_3:48925251-48925270 | Msa1292590:CDS | 55.0% |
| ! | ATGAGCAAGAGCTTGGTGGC+AGG | - | chr8_3:48925664-48925683 | None:intergenic | 55.0% |
| TCAGCGGATCCTCGAAGAGA+AGG | + | chr8_3:48926544-48926563 | Msa1292590:CDS | 55.0% | |
| GAGAGGCCGAATGGGACTCT+CGG | + | chr8_3:48926042-48926061 | Msa1292590:CDS | 60.0% | |
| GAGAGGCCGAATGGGACTCT+CGG | + | chr8_3:48926042-48926061 | Msa1292590:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_3 | gene | 48924919 | 48927225 | 48924919 | ID=Msa1292590;Name=Msa1292590 |
| chr8_3 | mRNA | 48924919 | 48927225 | 48924919 | ID=Msa1292590-mRNA-1;Parent=Msa1292590;Name=Msa1292590-mRNA-1;_AED=0.03;_eAED=0.03;_QI=0|-1|0|1|-1|1|1|0|768 |
| chr8_3 | exon | 48924919 | 48927225 | 48924919 | ID=Msa1292590-mRNA-1:exon:13567;Parent=Msa1292590-mRNA-1 |
| chr8_3 | CDS | 48924919 | 48927225 | 48924919 | ID=Msa1292590-mRNA-1:cds;Parent=Msa1292590-mRNA-1 |
| Gene Sequence |
| Protein sequence |
