Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1044470 | KEH28582.1 | 95.028 | 181 | 8 | 1 | 3 | 182 | 144 | 324 | 9.38e-121 | 354 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1044470 | sp|Q94AN4|AP2L1_ARATH | 48.148 | 189 | 77 | 5 | 3 | 181 | 166 | 343 | 1.53e-37 | 135 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1044470 | A0A072UFX2 | 95.028 | 181 | 8 | 1 | 3 | 182 | 144 | 324 | 4.48e-121 | 354 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1044470 | TF | AP2/ERF-ERF |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0005890 | Msa1044470 | 0.823254 | 1.529447e-53 | -8.615850e-47 |
| Msa0035120 | Msa1044470 | 0.804290 | 2.319574e-49 | -8.615850e-47 |
| Msa0043620 | Msa1044470 | 0.802240 | 6.163125e-49 | -8.615850e-47 |
| Msa0048510 | Msa1044470 | 0.809211 | 2.116468e-50 | -8.615850e-47 |
| Msa0049790 | Msa1044470 | 0.813754 | 2.180635e-51 | -8.615850e-47 |
| Msa0081520 | Msa1044470 | 0.846151 | 2.599949e-59 | -8.615850e-47 |
| Msa0090010 | Msa1044470 | 0.800390 | 1.473738e-48 | -8.615850e-47 |
| Msa0093850 | Msa1044470 | 0.824716 | 6.942558e-54 | -8.615850e-47 |
| Msa0094780 | Msa1044470 | 0.825235 | 5.236366e-54 | -8.615850e-47 |
| Msa0106620 | Msa1044470 | 0.829819 | 4.157628e-55 | -8.615850e-47 |
| Msa0106710 | Msa1044470 | 0.808057 | 3.734202e-50 | -8.615850e-47 |
| Msa0614000 | Msa1044470 | 0.819371 | 1.203020e-52 | -8.615850e-47 |
| Msa0624900 | Msa1044470 | 0.845300 | 4.426480e-59 | -8.615850e-47 |
| Msa0626450 | Msa1044470 | 0.851190 | 1.042896e-60 | -8.615850e-47 |
| Msa0626460 | Msa1044470 | 0.803702 | 3.072370e-49 | -8.615850e-47 |
| Msa0626490 | Msa1044470 | 0.851726 | 7.357894e-61 | -8.615850e-47 |
| Msa0630940 | Msa1044470 | 0.800673 | 1.290536e-48 | -8.615850e-47 |
| Msa0637560 | Msa1044470 | 0.802070 | 6.679942e-49 | -8.615850e-47 |
| Msa0638480 | Msa1044470 | 0.843685 | 1.203574e-58 | -8.615850e-47 |
| Msa0652000 | Msa1044470 | 0.802285 | 6.031139e-49 | -8.615850e-47 |
| Msa0658640 | Msa1044470 | 0.800769 | 1.233684e-48 | -8.615850e-47 |
| Msa0663270 | Msa1044470 | 0.836377 | 9.697719e-57 | -8.615850e-47 |
| Msa0664090 | Msa1044470 | 0.928944 | 1.408884e-92 | -8.615850e-47 |
| Msa0664150 | Msa1044470 | 0.947578 | 5.115999e-106 | -8.615850e-47 |
| Msa0664540 | Msa1044470 | 0.813703 | 2.237540e-51 | -8.615850e-47 |
| Msa0664600 | Msa1044470 | 0.852044 | 5.977025e-61 | -8.615850e-47 |
| Msa0669180 | Msa1044470 | 0.808029 | 3.785023e-50 | -8.615850e-47 |
| Msa0697160 | Msa1044470 | 0.820326 | 7.276014e-53 | -8.615850e-47 |
| Msa0713680 | Msa1044470 | 0.804735 | 1.872870e-49 | -8.615850e-47 |
| Msa0715420 | Msa1044470 | 0.808960 | 2.395245e-50 | -8.615850e-47 |
| Msa0721080 | Msa1044470 | 0.825495 | 4.545004e-54 | -8.615850e-47 |
| Msa0727640 | Msa1044470 | 0.801176 | 1.018849e-48 | -8.615850e-47 |
| Msa0768990 | Msa1044470 | 0.813281 | 2.770984e-51 | -8.615850e-47 |
| Msa0795870 | Msa1044470 | 0.855399 | 6.476093e-62 | -8.615850e-47 |
| Msa0797930 | Msa1044470 | 0.803317 | 3.693097e-49 | -8.615850e-47 |
| Msa0824450 | Msa1044470 | 0.805853 | 1.092128e-49 | -8.615850e-47 |
| Msa0830130 | Msa1044470 | 0.800929 | 1.144210e-48 | -8.615850e-47 |
| Msa0833530 | Msa1044470 | 0.800233 | 1.586383e-48 | -8.615850e-47 |
| Msa0833650 | Msa1044470 | 0.851770 | 7.146954e-61 | -8.615850e-47 |
| Msa0835960 | Msa1044470 | 0.816856 | 4.455887e-52 | -8.615850e-47 |
| Msa0133280 | Msa1044470 | 0.803811 | 2.917437e-49 | -8.615850e-47 |
| Msa0138360 | Msa1044470 | 0.803756 | 2.995179e-49 | -8.615850e-47 |
| Msa0173890 | Msa1044470 | 0.833704 | 4.576366e-56 | -8.615850e-47 |
| Msa0174450 | Msa1044470 | 0.824048 | 9.970026e-54 | -8.615850e-47 |
| Msa0181230 | Msa1044470 | 0.801934 | 7.123616e-49 | -8.615850e-47 |
| Msa0182190 | Msa1044470 | 0.816512 | 5.321879e-52 | -8.615850e-47 |
| Msa0182240 | Msa1044470 | 0.800513 | 1.391428e-48 | -8.615850e-47 |
| Msa0221000 | Msa1044470 | 0.809416 | 1.913282e-50 | -8.615850e-47 |
| Msa0223210 | Msa1044470 | 0.814598 | 1.419748e-51 | -8.615850e-47 |
| Msa0225100 | Msa1044470 | 0.805252 | 1.460122e-49 | -8.615850e-47 |
| Msa0225480 | Msa1044470 | 0.803021 | 4.251787e-49 | -8.615850e-47 |
| Msa0225680 | Msa1044470 | 0.810494 | 1.120995e-50 | -8.615850e-47 |
| Msa0225860 | Msa1044470 | 0.854421 | 1.245198e-61 | -8.615850e-47 |
| Msa0237210 | Msa1044470 | 0.814208 | 1.732266e-51 | -8.615850e-47 |
| Msa0369790 | Msa1044470 | 0.816802 | 4.582567e-52 | -8.615850e-47 |
| Msa0378720 | Msa1044470 | 0.828470 | 8.829163e-55 | -8.615850e-47 |
| Msa0418190 | Msa1044470 | 0.805691 | 1.181028e-49 | -8.615850e-47 |
| Msa0428370 | Msa1044470 | 0.824091 | 9.740155e-54 | -8.615850e-47 |
| Msa0464000 | Msa1044470 | 0.813501 | 2.479180e-51 | -8.615850e-47 |
| Msa0474730 | Msa1044470 | 0.825347 | 4.927103e-54 | -8.615850e-47 |
| Msa0476650 | Msa1044470 | 0.811081 | 8.367017e-51 | -8.615850e-47 |
| Msa1000920 | Msa1044470 | 0.804806 | 1.810139e-49 | -8.615850e-47 |
| Msa1027990 | Msa1044470 | 0.803134 | 4.030500e-49 | -8.615850e-47 |
| Msa1028280 | Msa1044470 | 0.824500 | 7.803242e-54 | -8.615850e-47 |
| Msa1034500 | Msa1044470 | 0.804480 | 2.117229e-49 | -8.615850e-47 |
| Msa1044470 | Msa1072940 | 0.817380 | 3.399111e-52 | -8.615850e-47 |
| Msa1044470 | Msa1085330 | 0.802645 | 5.086041e-49 | -8.615850e-47 |
| Msa1044470 | Msa1089450 | 0.819041 | 1.430180e-52 | -8.615850e-47 |
| Msa1044470 | Msa1103990 | 0.805585 | 1.243660e-49 | -8.615850e-47 |
| Msa1044470 | Msa1112380 | 0.802373 | 5.786036e-49 | -8.615850e-47 |
| Msa1044470 | Msa1132840 | 0.853864 | 1.802551e-61 | -8.615850e-47 |
| Msa1044470 | Msa1145810 | 0.846195 | 2.529825e-59 | -8.615850e-47 |
| Msa1044470 | Msa1155170 | -0.817105 | 3.917824e-52 | -8.615850e-47 |
| Msa1044470 | Msa1157870 | 0.804563 | 2.034156e-49 | -8.615850e-47 |
| Msa1044470 | Msa1160920 | 0.828520 | 8.587886e-55 | -8.615850e-47 |
| Msa1044470 | Msa1162770 | 0.804808 | 1.808164e-49 | -8.615850e-47 |
| Msa1044470 | Msa1186020 | 0.838985 | 2.076848e-57 | -8.615850e-47 |
| Msa1044470 | Msa1200890 | 0.837795 | 4.210646e-57 | -8.615850e-47 |
| Msa1044470 | Msa1208160 | 0.810730 | 9.970225e-51 | -8.615850e-47 |
| Msa1044470 | Msa1208430 | 0.825837 | 3.770420e-54 | -8.615850e-47 |
| Msa1044470 | Msa1208950 | 0.822091 | 2.851476e-53 | -8.615850e-47 |
| Msa1044470 | Msa1217210 | 0.831335 | 1.769093e-55 | -8.615850e-47 |
| Msa1044470 | Msa1219000 | 0.834338 | 3.175227e-56 | -8.615850e-47 |
| Msa1044470 | Msa1222350 | 0.827795 | 1.284484e-54 | -8.615850e-47 |
| Msa1044470 | Msa1224930 | 0.803319 | 3.688762e-49 | -8.615850e-47 |
| Msa1044470 | Msa1225860 | -0.819187 | 1.325137e-52 | -8.615850e-47 |
| Msa1044470 | Msa1228200 | 0.800585 | 1.345002e-48 | -8.615850e-47 |
| Msa1044470 | Msa1253550 | 0.807955 | 3.925079e-50 | -8.615850e-47 |
| Msa1044470 | Msa1264710 | 0.804588 | 2.010352e-49 | -8.615850e-47 |
| Msa1044470 | Msa1267900 | 0.805400 | 1.359709e-49 | -8.615850e-47 |
| Msa1044470 | Msa1277150 | 0.805108 | 1.565371e-49 | -8.615850e-47 |
| Msa1044470 | Msa1292590 | 0.800559 | 1.361380e-48 | -8.615850e-47 |
| Msa1044470 | Msa1298370 | 0.819549 | 1.095785e-52 | -8.615850e-47 |
| Msa1044470 | Msa1307630 | 0.812763 | 3.598582e-51 | -8.615850e-47 |
| Msa1044470 | Msa1320670 | 0.832257 | 1.048186e-55 | -8.615850e-47 |
| Msa1044470 | Msa1332760 | 0.827766 | 1.304708e-54 | -8.615850e-47 |
| Msa1044470 | Msa1348090 | 0.826640 | 2.427968e-54 | -8.615850e-47 |
| Msa1044470 | Msa1356830 | 0.830772 | 2.432195e-55 | -8.615850e-47 |
| Msa1044470 | Msa1359690 | 0.801527 | 8.632697e-49 | -8.615850e-47 |
| Msa1044470 | Msa1369150 | 0.819502 | 1.122929e-52 | -8.615850e-47 |
| Msa1044470 | Msa1371520 | 0.802150 | 6.431692e-49 | -8.615850e-47 |
| Msa1044470 | Msa1373100 | 0.803172 | 3.958279e-49 | -8.615850e-47 |
| Msa1044470 | Msa1392580 | 0.831018 | 2.117304e-55 | -8.615850e-47 |
| Msa1044470 | Msa1397400 | 0.831205 | 1.905249e-55 | -8.615850e-47 |
| Msa1044470 | Msa1418240 | 0.812620 | 3.868039e-51 | -8.615850e-47 |
| Msa1044470 | Msa1420950 | 0.823142 | 1.624170e-53 | -8.615850e-47 |
| Msa1044470 | Msa1422950 | 0.802999 | 4.297120e-49 | -8.615850e-47 |
| Msa1044470 | Msa1427200 | 0.826229 | 3.042413e-54 | -8.615850e-47 |
| Msa1044470 | Msa1437940 | 0.823730 | 1.183610e-53 | -8.615850e-47 |
| Msa1044470 | Msa1440880 | 0.806223 | 9.130198e-50 | -8.615850e-47 |
| Msa1044470 | Msa1440960 | 0.841920 | 3.546791e-58 | -8.615850e-47 |
| Msa1044470 | Msa1446810 | 0.806058 | 9.889557e-50 | -8.615850e-47 |
| Msa0240900 | Msa1044470 | 0.809778 | 1.599562e-50 | -8.615850e-47 |
| Msa0258310 | Msa1044470 | 0.800062 | 1.718976e-48 | -8.615850e-47 |
| Msa0260510 | Msa1044470 | 0.825395 | 4.797972e-54 | -8.615850e-47 |
| Msa0264400 | Msa1044470 | 0.806501 | 7.979486e-50 | -8.615850e-47 |
| Msa0266180 | Msa1044470 | 0.804076 | 2.569426e-49 | -8.615850e-47 |
| Msa0274980 | Msa1044470 | 0.801733 | 7.833993e-49 | -8.615850e-47 |
| Msa0279710 | Msa1044470 | 0.801142 | 1.035182e-48 | -8.615850e-47 |
| Msa0279850 | Msa1044470 | 0.818625 | 1.778058e-52 | -8.615850e-47 |
| Msa0287740 | Msa1044470 | 0.801281 | 9.695881e-49 | -8.615850e-47 |
| Msa0298470 | Msa1044470 | 0.829992 | 3.774031e-55 | -8.615850e-47 |
| Msa0300270 | Msa1044470 | 0.821959 | 3.059196e-53 | -8.615850e-47 |
| Msa0300320 | Msa1044470 | 0.835172 | 1.959084e-56 | -8.615850e-47 |
| Msa0302290 | Msa1044470 | 0.801932 | 7.128550e-49 | -8.615850e-47 |
| Msa0307270 | Msa1044470 | 0.827253 | 1.732709e-54 | -8.615850e-47 |
| Msa0315690 | Msa1044470 | 0.812167 | 4.858924e-51 | -8.615850e-47 |
| Msa0317970 | Msa1044470 | 0.810028 | 1.413084e-50 | -8.615850e-47 |
| Msa0322900 | Msa1044470 | 0.819502 | 1.122929e-52 | -8.615850e-47 |
| Msa0337700 | Msa1044470 | 0.821576 | 3.752308e-53 | -8.615850e-47 |
| Msa0339500 | Msa1044470 | 0.806785 | 6.949560e-50 | -8.615850e-47 |
| Msa0339650 | Msa1044470 | 0.836023 | 1.192745e-56 | -8.615850e-47 |
| Msa0340500 | Msa1044470 | 0.823532 | 1.316832e-53 | -8.615850e-47 |
| Msa0341690 | Msa1044470 | 0.829025 | 6.484667e-55 | -8.615850e-47 |
| Msa0358890 | Msa1044470 | 0.813733 | 2.203797e-51 | -8.615850e-47 |
| Msa0361910 | Msa1044470 | 0.820430 | 6.886413e-53 | -8.615850e-47 |
| Msa0483100 | Msa1044470 | 0.828197 | 1.027669e-54 | -8.615850e-47 |
| Msa0485240 | Msa1044470 | 0.807433 | 5.066066e-50 | -8.615850e-47 |
| Msa0509550 | Msa1044470 | 0.816958 | 4.227737e-52 | -8.615850e-47 |
| Msa0518030 | Msa1044470 | 0.817446 | 3.284120e-52 | -8.615850e-47 |
| Msa0526730 | Msa1044470 | 0.800056 | 1.723783e-48 | -8.615850e-47 |
| Msa0527190 | Msa1044470 | 0.807744 | 4.352788e-50 | -8.615850e-47 |
| Msa0527820 | Msa1044470 | 0.896822 | 2.550581e-76 | -8.615850e-47 |
| Msa0534720 | Msa1044470 | 0.815274 | 1.005339e-51 | -8.615850e-47 |
| Msa0556010 | Msa1044470 | 0.808041 | 3.763666e-50 | -8.615850e-47 |
| Msa0565090 | Msa1044470 | 0.809945 | 1.472539e-50 | -8.615850e-47 |
| Msa0573850 | Msa1044470 | 0.814852 | 1.247608e-51 | -8.615850e-47 |
| Msa0580370 | Msa1044470 | 0.849849 | 2.483611e-60 | -8.615850e-47 |
| Msa0582480 | Msa1044470 | 0.904141 | 1.672206e-79 | -8.615850e-47 |
| Msa0583360 | Msa1044470 | -0.816221 | 6.184390e-52 | -8.615850e-47 |
| Msa0586220 | Msa1044470 | 0.907383 | 5.375691e-81 | -8.615850e-47 |
| Msa0590640 | Msa1044470 | 0.801439 | 8.999462e-49 | -8.615850e-47 |
| Msa0590830 | Msa1044470 | 0.814136 | 1.796020e-51 | -8.615850e-47 |
| Msa0597790 | Msa1044470 | 0.822638 | 2.128880e-53 | -8.615850e-47 |
| Msa0861510 | Msa1044470 | 0.821710 | 3.492816e-53 | -8.615850e-47 |
| Msa0861530 | Msa1044470 | 0.802982 | 4.331187e-49 | -8.615850e-47 |
| Msa0861600 | Msa1044470 | 0.826480 | 2.651433e-54 | -8.615850e-47 |
| Msa0871720 | Msa1044470 | 0.826424 | 2.733682e-54 | -8.615850e-47 |
| Msa0881090 | Msa1044470 | 0.823444 | 1.380378e-53 | -8.615850e-47 |
| Msa0902510 | Msa1044470 | 0.817878 | 2.624237e-52 | -8.615850e-47 |
| Msa0903070 | Msa1044470 | 0.820373 | 7.097356e-53 | -8.615850e-47 |
| Msa0934140 | Msa1044470 | 0.803609 | 3.212020e-49 | -8.615850e-47 |
| Msa0945110 | Msa1044470 | 0.804778 | 1.834569e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1044470 | MtrunA17_Chr4g0002011 | 95.028 | 181 | 8 | 1 | 3 | 182 | 147 | 327 | 1.05e-124 | 354 |
| Msa1044470 | MtrunA17_Chr2g0305831 | 47.368 | 209 | 68 | 7 | 1 | 176 | 1 | 200 | 1.89e-51 | 164 |
| Msa1044470 | MtrunA17_Chr4g0073521 | 47.115 | 208 | 72 | 6 | 3 | 182 | 155 | 352 | 7.77e-46 | 154 |
| Msa1044470 | MtrunA17_Chr7g0216601 | 75.000 | 76 | 17 | 1 | 3 | 78 | 176 | 249 | 1.48e-34 | 125 |
| Msa1044470 | MtrunA17_Chr8g0355191 | 46.429 | 140 | 48 | 3 | 3 | 142 | 163 | 275 | 3.96e-33 | 122 |
| Msa1044470 | MtrunA17_Chr8g0355181 | 82.812 | 64 | 11 | 0 | 3 | 66 | 164 | 227 | 5.31e-32 | 118 |
| Msa1044470 | MtrunA17_Chr8g0362541 | 70.886 | 79 | 9 | 1 | 3 | 67 | 177 | 255 | 5.66e-32 | 119 |
| Msa1044470 | MtrunA17_Chr6g0452911 | 83.607 | 61 | 10 | 0 | 3 | 63 | 179 | 239 | 8.09e-32 | 117 |
| Msa1044470 | MtrunA17_Chr4g0072291 | 78.947 | 57 | 12 | 0 | 3 | 59 | 270 | 326 | 3.56e-26 | 103 |
| Msa1044470 | MtrunA17_Chr1g0152161 | 75.439 | 57 | 14 | 0 | 3 | 59 | 420 | 476 | 2.14e-25 | 102 |
| Msa1044470 | MtrunA17_Chr7g0249621 | 77.193 | 57 | 13 | 0 | 3 | 59 | 370 | 426 | 4.83e-25 | 101 |
| Msa1044470 | MtrunA17_Chr4g0032631 | 75.439 | 57 | 14 | 0 | 3 | 59 | 274 | 330 | 7.15e-25 | 100 |
| Msa1044470 | MtrunA17_Chr3g0135161 | 75.439 | 57 | 14 | 0 | 3 | 59 | 418 | 474 | 8.25e-25 | 100 |
| Msa1044470 | MtrunA17_Chr2g0328971 | 75.439 | 57 | 14 | 0 | 3 | 59 | 275 | 331 | 1.22e-24 | 99.8 |
| Msa1044470 | MtrunA17_Chr8g0343851 | 75.439 | 57 | 14 | 0 | 3 | 59 | 356 | 412 | 1.80e-24 | 99.4 |
| Msa1044470 | MtrunA17_Chr4g0054351 | 73.684 | 57 | 15 | 0 | 3 | 59 | 421 | 477 | 6.44e-24 | 97.8 |
| Msa1044470 | MtrunA17_Chr5g0400871 | 71.930 | 57 | 16 | 0 | 3 | 59 | 360 | 416 | 1.31e-23 | 96.7 |
| Msa1044470 | MtrunA17_Chr8g0367311 | 71.930 | 57 | 16 | 0 | 3 | 59 | 93 | 149 | 5.04e-23 | 92.0 |
| Msa1044470 | MtrunA17_Chr4g0053181 | 46.465 | 99 | 41 | 2 | 5 | 102 | 275 | 362 | 8.51e-16 | 74.3 |
| Msa1044470 | MtrunA17_Chr7g0263581 | 43.137 | 102 | 44 | 3 | 5 | 106 | 238 | 325 | 1.37e-15 | 73.6 |
| Msa1044470 | MtrunA17_Chr5g0412151 | 73.684 | 57 | 15 | 0 | 3 | 59 | 335 | 391 | 4.91e-15 | 72.0 |
| Msa1044470 | MtrunA17_Chr5g0401891 | 48.235 | 85 | 34 | 2 | 5 | 89 | 251 | 325 | 5.92e-15 | 72.0 |
| Msa1044470 | MtrunA17_Chr4g0030191 | 42.268 | 97 | 43 | 2 | 5 | 101 | 230 | 313 | 1.99e-14 | 70.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1044470 | AT1G16060.7 | 48.889 | 180 | 89 | 2 | 3 | 181 | 10 | 187 | 1.14e-40 | 136 |
| Msa1044470 | AT1G16060.2 | 48.333 | 180 | 90 | 2 | 3 | 181 | 32 | 209 | 7.61e-40 | 135 |
| Msa1044470 | AT1G16060.4 | 48.333 | 180 | 90 | 2 | 3 | 181 | 32 | 209 | 7.61e-40 | 135 |
| Msa1044470 | AT1G16060.6 | 48.333 | 180 | 90 | 2 | 3 | 181 | 32 | 209 | 7.61e-40 | 135 |
| Msa1044470 | AT1G16060.5 | 48.333 | 180 | 90 | 2 | 3 | 181 | 32 | 209 | 7.61e-40 | 135 |
| Msa1044470 | AT1G16060.3 | 48.333 | 180 | 90 | 2 | 3 | 181 | 96 | 273 | 2.93e-39 | 135 |
| Msa1044470 | AT1G16060.1 | 48.148 | 189 | 77 | 5 | 3 | 181 | 166 | 343 | 1.56e-38 | 135 |
| Msa1044470 | AT1G79700.3 | 51.111 | 180 | 58 | 7 | 3 | 181 | 84 | 234 | 4.12e-36 | 126 |
| Msa1044470 | AT1G79700.4 | 51.111 | 180 | 58 | 7 | 3 | 181 | 78 | 228 | 4.15e-36 | 125 |
| Msa1044470 | AT1G79700.2 | 51.111 | 180 | 58 | 7 | 3 | 181 | 160 | 310 | 2.69e-35 | 125 |
| Msa1044470 | AT3G54320.2 | 85.938 | 64 | 9 | 0 | 3 | 66 | 32 | 95 | 7.89e-27 | 103 |
| Msa1044470 | AT3G54320.4 | 85.938 | 64 | 9 | 0 | 3 | 66 | 107 | 170 | 4.59e-26 | 102 |
| Msa1044470 | AT3G54320.5 | 85.938 | 64 | 9 | 0 | 3 | 66 | 107 | 170 | 4.59e-26 | 102 |
| Msa1044470 | AT5G57390.2 | 64.474 | 76 | 16 | 1 | 3 | 67 | 193 | 268 | 6.12e-26 | 103 |
| Msa1044470 | AT5G57390.1 | 64.474 | 76 | 16 | 1 | 3 | 67 | 311 | 386 | 7.18e-26 | 103 |
| Msa1044470 | AT3G54320.3 | 85.938 | 64 | 9 | 0 | 3 | 66 | 173 | 236 | 8.98e-26 | 102 |
| Msa1044470 | AT3G54320.1 | 85.938 | 64 | 9 | 0 | 3 | 66 | 173 | 236 | 1.02e-25 | 102 |
| Msa1044470 | AT1G72570.1 | 77.193 | 57 | 13 | 0 | 3 | 59 | 331 | 387 | 4.32e-25 | 100 |
| Msa1044470 | AT4G37750.1 | 75.439 | 57 | 14 | 0 | 3 | 59 | 391 | 447 | 2.15e-24 | 99.4 |
| Msa1044470 | AT5G17430.1 | 75.439 | 57 | 14 | 0 | 3 | 59 | 318 | 374 | 3.82e-24 | 99.0 |
| Msa1044470 | AT5G17430.2 | 75.439 | 57 | 14 | 0 | 3 | 59 | 256 | 312 | 4.13e-24 | 98.6 |
| Msa1044470 | AT1G79700.1 | 45.556 | 180 | 58 | 8 | 3 | 181 | 160 | 300 | 6.12e-24 | 95.9 |
| Msa1044470 | AT1G51190.1 | 73.684 | 57 | 15 | 0 | 3 | 59 | 298 | 354 | 9.58e-24 | 97.8 |
| Msa1044470 | AT3G20840.1 | 73.684 | 57 | 15 | 0 | 3 | 59 | 289 | 345 | 9.76e-24 | 97.8 |
| Msa1044470 | AT2G28550.3 | 35.821 | 134 | 70 | 2 | 5 | 136 | 252 | 371 | 1.36e-16 | 77.0 |
| Msa1044470 | AT5G65510.2 | 73.684 | 57 | 15 | 0 | 3 | 59 | 339 | 395 | 1.03e-15 | 74.7 |
| Msa1044470 | AT5G65510.1 | 73.684 | 57 | 15 | 0 | 3 | 59 | 339 | 395 | 1.03e-15 | 74.7 |
| Msa1044470 | AT5G65510.4 | 73.684 | 57 | 15 | 0 | 3 | 59 | 281 | 337 | 1.33e-15 | 73.9 |
| Msa1044470 | AT5G10510.2 | 73.684 | 57 | 15 | 0 | 3 | 59 | 335 | 391 | 1.63e-15 | 73.9 |
| Msa1044470 | AT5G10510.6 | 73.684 | 57 | 15 | 0 | 3 | 59 | 376 | 432 | 1.70e-15 | 73.9 |
| Msa1044470 | AT5G10510.4 | 73.684 | 57 | 15 | 0 | 3 | 59 | 376 | 432 | 1.70e-15 | 73.9 |
| Msa1044470 | AT5G10510.1 | 73.684 | 57 | 15 | 0 | 3 | 59 | 361 | 417 | 1.72e-15 | 73.9 |
| Msa1044470 | AT5G10510.3 | 73.684 | 57 | 15 | 0 | 3 | 59 | 396 | 452 | 1.75e-15 | 73.9 |
| Msa1044470 | AT5G10510.7 | 73.684 | 57 | 15 | 0 | 3 | 59 | 338 | 394 | 1.85e-15 | 73.9 |
| Msa1044470 | AT5G10510.5 | 73.684 | 57 | 15 | 0 | 3 | 59 | 338 | 394 | 1.85e-15 | 73.9 |
| Msa1044470 | AT4G36920.1 | 42.424 | 99 | 45 | 2 | 5 | 91 | 230 | 328 | 2.58e-15 | 73.2 |
| Msa1044470 | AT4G36920.2 | 42.424 | 99 | 45 | 2 | 5 | 91 | 230 | 328 | 2.58e-15 | 73.2 |
| Msa1044470 | AT5G67180.2 | 54.545 | 55 | 25 | 0 | 5 | 59 | 195 | 249 | 5.07e-13 | 66.2 |
| Msa1044470 | AT5G67180.1 | 54.545 | 55 | 25 | 0 | 5 | 59 | 195 | 249 | 6.14e-13 | 66.2 |
| Msa1044470 | AT5G67180.3 | 54.545 | 55 | 25 | 0 | 5 | 59 | 195 | 249 | 6.39e-13 | 65.9 |
Find 45 sgRNAs with CRISPR-Local
Find 176 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTAACATGTCTTCGAATTT+TGG | 0.115041 | 7_2:+2812989 | None:intergenic |
| TATTTATACCTTGGAACTTA+TGG | 0.227175 | 7_2:-2815945 | Msa1044470:intron |
| TCGTCGTTGTCTTGTGGTTT+AGG | 0.271322 | 7_2:+2813121 | None:intergenic |
| GGGCTTGATGCTTGATTAGA+AGG | 0.288151 | 7_2:-2812779 | Msa1044470:exon |
| AATGATGATGACAACATATT+TGG | 0.301779 | 7_2:-2812839 | Msa1044470:CDS |
| TTGATTAGAAGGAGAAATTA+TGG | 0.304800 | 7_2:-2812768 | Msa1044470:exon |
| AAAATTGTTTGAATATCTTC+TGG | 0.307325 | 7_2:+2812893 | None:intergenic |
| TGAGTTGAAAATAAAGTATA+TGG | 0.366672 | 7_2:+2812713 | None:intergenic |
| GCTCTTACGTGTCATCTTGT+TGG | 0.374034 | 7_2:+2812536 | None:intergenic |
| GCTCGAATTGGCAGGGTCTT+CGG | 0.404820 | 7_2:-2815975 | Msa1044470:CDS |
| GAGTAAACAATTTAGAGAAT+GGG | 0.413873 | 7_2:-2812635 | Msa1044470:three_prime_UTR |
| GGCAACAAATATTTATACCT+TGG | 0.417814 | 7_2:-2815954 | Msa1044470:CDS |
| AGAGTAAACAATTTAGAGAA+TGG | 0.423558 | 7_2:-2812636 | Msa1044470:three_prime_UTR |
| GATGGGAAGCTCGAATTGGC+AGG | 0.455003 | 7_2:-2815983 | Msa1044470:CDS |
| CGTGGAATGGTTGATTTGAC+AGG | 0.483312 | 7_2:+2812926 | None:intergenic |
| GGAAGATGGGAAGCTCGAAT+TGG | 0.493895 | 7_2:-2815987 | Msa1044470:CDS |
| GACACCACCACAATGGAAGA+TGG | 0.496318 | 7_2:-2816001 | Msa1044470:CDS |
| TGCTAGCAATAATCAAGAGC+TGG | 0.512163 | 7_2:-2813077 | Msa1044470:CDS |
| CTGGATCTTAATCAAGAACT+TGG | 0.515101 | 7_2:-2813058 | Msa1044470:CDS |
| TCACAGTTGTAAGAAATGAT+TGG | 0.525560 | 7_2:+2812560 | None:intergenic |
| ATGGCAGCAATAGAGTATAG+AGG | 0.527216 | 7_2:-2813196 | Msa1044470:CDS |
| GTTAGAAAATTCATCGTCAT+CGG | 0.529129 | 7_2:-2812972 | Msa1044470:CDS |
| TTACTATCGTCGTTGTCTTG+TGG | 0.533843 | 7_2:+2813115 | None:intergenic |
| AGTAAACAATTTAGAGAATG+GGG | 0.534967 | 7_2:-2812634 | Msa1044470:three_prime_UTR |
| ATAAGATCAGTCGAAGATGC+TGG | 0.558029 | 7_2:+2813022 | None:intergenic |
| TGGAAATGTCCGACGTGGAA+TGG | 0.559065 | 7_2:+2812913 | None:intergenic |
| ATGGTTGATTTGACAGGCGG+TGG | 0.564133 | 7_2:+2812932 | None:intergenic |
| GATCTTAATCAAGAACTTGG+TGG | 0.566882 | 7_2:-2813055 | Msa1044470:CDS |
| CTTCCCATCTTCCATTGTGG+TGG | 0.578979 | 7_2:+2815997 | None:intergenic |
| ACACCACCACAATGGAAGAT+GGG | 0.584570 | 7_2:-2816000 | Msa1044470:CDS |
| TGCTGCCATGTCATAAGCTG+TGG | 0.586967 | 7_2:+2813210 | None:intergenic |
| GAGCTTCCCATCTTCCATTG+TGG | 0.592861 | 7_2:+2815994 | None:intergenic |
| TGGAAGTACCATAAGTTCCA+AGG | 0.606508 | 7_2:+2815937 | None:intergenic |
| TGGCAGCAATAGAGTATAGA+GGG | 0.606682 | 7_2:-2813195 | Msa1044470:CDS |
| CTTAATCAAGAACTTGGTGG+TGG | 0.608278 | 7_2:-2813052 | Msa1044470:CDS |
| ATCAGTCGAAGATGCTGGTG+TGG | 0.611842 | 7_2:+2813027 | None:intergenic |
| TCATTTAATAATAGATGACA+AGG | 0.613911 | 7_2:-2812690 | Msa1044470:three_prime_UTR |
| ACTAAGATCAAAGTTTGTAA+CGG | 0.614633 | 7_2:+2813165 | None:intergenic |
| ATGGGAAGCTCGAATTGGCA+GGG | 0.643491 | 7_2:-2815982 | Msa1044470:CDS |
| AGCAGCCACAGCTTATGACA+TGG | 0.655956 | 7_2:-2813215 | Msa1044470:CDS |
| ATGTTTAGACACCACCACAA+TGG | 0.660446 | 7_2:-2816008 | Msa1044470:CDS |
| GGAATGGTTGATTTGACAGG+CGG | 0.690559 | 7_2:+2812929 | None:intergenic |
| TCTTCTGGAAATGTCCGACG+TGG | 0.691543 | 7_2:+2812908 | None:intergenic |
| CATTTAATAATAGATGACAA+GGG | 0.729629 | 7_2:-2812689 | Msa1044470:three_prime_UTR |
| TCAAATCAACCATTCCACGT+CGG | 0.751359 | 7_2:-2812922 | Msa1044470:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTAATTAGATGAATTTAATA+CGG | + | chr7_2:2812743-2812762 | None:intergenic | 10.0% |
| !!! | AATATTTTATTAGAGTTTTT+TGG | + | chr7_2:2813056-2813075 | None:intergenic | 10.0% |
| !! | AACTAAAAGTAATATATATT+TGG | - | chr7_2:2813181-2813200 | Msa1044470:CDS | 10.0% |
| !! | AATTAATTTACTTACTAATT+AGG | - | chr7_2:2814367-2814386 | Msa1044470:intron | 10.0% |
| !!! | AAAAAATGAATTTGTTAATT+TGG | - | chr7_2:2815894-2815913 | Msa1044470:intron | 10.0% |
| !!! | AAAAATGAATTTGTTAATTT+GGG | - | chr7_2:2815895-2815914 | Msa1044470:intron | 10.0% |
| !!! | TTGATTTTAAGAATTTTTTA+GGG | - | chr7_2:2815976-2815995 | Msa1044470:CDS | 10.0% |
| !! | TAATTAGATGAATTTAATAC+GGG | + | chr7_2:2812742-2812761 | None:intergenic | 15.0% |
| !!! | TGATTATGTATAATTGATTT+TGG | - | chr7_2:2813144-2813163 | Msa1044470:CDS | 15.0% |
| !!! | CCTTAATTTTTTACTATATT+GGG | - | chr7_2:2813670-2813689 | Msa1044470:intron | 15.0% |
| !!! | TCTATCTGTTTTTATTTTAT+GGG | + | chr7_2:2813867-2813886 | None:intergenic | 15.0% |
| !!! | ATCTATCTGTTTTTATTTTA+TGG | + | chr7_2:2813868-2813887 | None:intergenic | 15.0% |
| !! | TAAAAACTTATGCTATAATT+GGG | + | chr7_2:2813912-2813931 | None:intergenic | 15.0% |
| !! | ATAAAAACTTATGCTATAAT+TGG | + | chr7_2:2813913-2813932 | None:intergenic | 15.0% |
| !! | ATATATAAAAAAGAAATGGA+CGG | - | chr7_2:2814427-2814446 | Msa1044470:intron | 15.0% |
| !! | GTTATAGTTTGAAAATAAAA+TGG | + | chr7_2:2814682-2814701 | None:intergenic | 15.0% |
| !! | AAGTATGTATTAATTTATCT+CGG | - | chr7_2:2815068-2815087 | Msa1044470:intron | 15.0% |
| !!! | CTTGATTTTAAGAATTTTTT+AGG | - | chr7_2:2815975-2815994 | Msa1044470:CDS | 15.0% |
| !!! | TGATTTTAAGAATTTTTTAG+GGG | - | chr7_2:2815977-2815996 | Msa1044470:CDS | 15.0% |
| !!! | GTTTTTATAGGTACTTATAT+AGG | - | chr7_2:2812619-2812638 | Msa1044470:three_prime_UTR | 20.0% |
| !! | TAGAACAAAAAAAGATACTA+TGG | - | chr7_2:2812784-2812803 | Msa1044470:exon | 20.0% |
| !! | AGTATAATTAATTATGCCAT+TGG | + | chr7_2:2813303-2813322 | None:intergenic | 20.0% |
| !!! | TACATATATCACTACTTTTT+TGG | + | chr7_2:2813364-2813383 | None:intergenic | 20.0% |
| !!! | TTCATTTTCTCTTTTCTTAT+TGG | - | chr7_2:2813414-2813433 | Msa1044470:intron | 20.0% |
| !!! | GCCTTAATTTTTTACTATAT+TGG | - | chr7_2:2813669-2813688 | Msa1044470:intron | 20.0% |
| !! | CCCAATATAGTAAAAAATTA+AGG | + | chr7_2:2813673-2813692 | None:intergenic | 20.0% |
| !!! | AATGCAAAATTGCTTTTTTT+GGG | + | chr7_2:2813734-2813753 | None:intergenic | 20.0% |
| !!! | AAAAAAAGCAATTTTGCATT+GGG | - | chr7_2:2813734-2813753 | Msa1044470:intron | 20.0% |
| !!! | TACTATTTTGTTATCTTTGT+AGG | + | chr7_2:2814090-2814109 | None:intergenic | 20.0% |
| !! | AAAGATAACAAAATAGTAGT+AGG | - | chr7_2:2814092-2814111 | Msa1044470:intron | 20.0% |
| !! | AATTAATTAATCTCAACATG+CGG | + | chr7_2:2814355-2814374 | None:intergenic | 20.0% |
| !! | CATTCTCTTGTATATAAAAT+TGG | + | chr7_2:2814462-2814481 | None:intergenic | 20.0% |
| !! | TTATAAATTGTAATAGTGAC+GGG | + | chr7_2:2814716-2814735 | None:intergenic | 20.0% |
| !! | CTTATAAATTGTAATAGTGA+CGG | + | chr7_2:2814717-2814736 | None:intergenic | 20.0% |
| !! | CATTCAATTAATGATGTATA+AGG | + | chr7_2:2814796-2814815 | None:intergenic | 20.0% |
| !! | ATAGTACAATTCATATTTGT+TGG | - | chr7_2:2814862-2814881 | Msa1044470:intron | 20.0% |
| !!! | ACTTTTTTTTTGACAAACTT+AGG | - | chr7_2:2814919-2814938 | Msa1044470:intron | 20.0% |
| !!! | TAATCAATCAGTTATTTCTA+TGG | + | chr7_2:2815155-2815174 | None:intergenic | 20.0% |
| !! | AAAATTGTTTGAATATCTTC+TGG | + | chr7_2:2815599-2815618 | None:intergenic | 20.0% |
| !!! | TGAGTTGAAAATAAAGTATA+TGG | + | chr7_2:2815779-2815798 | None:intergenic | 20.0% |
| !! | TCATTTAATAATAGATGACA+AGG | - | chr7_2:2815799-2815818 | Msa1044470:intron | 20.0% |
| !! | CATTTAATAATAGATGACAA+GGG | - | chr7_2:2815800-2815819 | Msa1044470:intron | 20.0% |
| ! | TATTTATACCTTGGAACTTA+TGG | - | chr7_2:2812544-2812563 | Msa1044470:three_prime_UTR | 25.0% |
| ! | TGAAAATCATATATAGTGAG+TGG | + | chr7_2:2812575-2812594 | None:intergenic | 25.0% |
| ! | TATTAACACACCTTATTCTT+AGG | - | chr7_2:2812671-2812690 | Msa1044470:three_prime_UTR | 25.0% |
| !!! | ATGTCATTTTCATATGCATT+TGG | - | chr7_2:2812892-2812911 | Msa1044470:CDS | 25.0% |
| !! | TTTTTCTTTCTCTATTGCTT+TGG | + | chr7_2:2813441-2813460 | None:intergenic | 25.0% |
| ! | AAAGCAATAGAGAAAGAAAA+AGG | - | chr7_2:2813440-2813459 | Msa1044470:intron | 25.0% |
| !!! | GGATTAGAATTGATTTTGAA+AGG | + | chr7_2:2813541-2813560 | None:intergenic | 25.0% |
| !!! | TGTTTTGTTTCTCTTTTAGA+TGG | + | chr7_2:2813562-2813581 | None:intergenic | 25.0% |
| !!! | CAATGCAAAATTGCTTTTTT+TGG | + | chr7_2:2813735-2813754 | None:intergenic | 25.0% |
| !! | CAAAAAAAGCAATTTTGCAT+TGG | - | chr7_2:2813733-2813752 | Msa1044470:intron | 25.0% |
| ! | AATATGCAATCAAATCTAGT+TGG | - | chr7_2:2814131-2814150 | Msa1044470:intron | 25.0% |
| ! | TTTATTAAGCAGTTGAAGTT+TGG | + | chr7_2:2814172-2814191 | None:intergenic | 25.0% |
| !!! | TCAAAAAAAAGCTTTGAGTA+AGG | - | chr7_2:2814327-2814346 | Msa1044470:intron | 25.0% |
| !! | TATTGTCACTTAATATTGCA+AGG | - | chr7_2:2814596-2814615 | Msa1044470:intron | 25.0% |
| !! | ACTCTCTTGTTATATAATTG+AGG | - | chr7_2:2815014-2815033 | Msa1044470:intron | 25.0% |
| !! | CTCTCTTGTTATATAATTGA+GGG | - | chr7_2:2815015-2815034 | Msa1044470:intron | 25.0% |
| !!! | TTTTTTGTGTGTAGTAAATC+CGG | + | chr7_2:2815043-2815062 | None:intergenic | 25.0% |
| ! | ATCCATTTATGTTTGTGTTA+TGG | - | chr7_2:2815233-2815252 | Msa1044470:intron | 25.0% |
| ! | ACTAAGATCAAAGTTTGTAA+CGG | + | chr7_2:2815327-2815346 | None:intergenic | 25.0% |
| !! | AATGATGATGACAACATATT+TGG | - | chr7_2:2815650-2815669 | Msa1044470:intron | 25.0% |
| ! | TTGATTAGAAGGAGAAATTA+TGG | - | chr7_2:2815721-2815740 | Msa1044470:intron | 25.0% |
| ! | AGAGTAAACAATTTAGAGAA+TGG | - | chr7_2:2815853-2815872 | Msa1044470:intron | 25.0% |
| ! | GAGTAAACAATTTAGAGAAT+GGG | - | chr7_2:2815854-2815873 | Msa1044470:intron | 25.0% |
| ! | AGTAAACAATTTAGAGAATG+GGG | - | chr7_2:2815855-2815874 | Msa1044470:intron | 25.0% |
| GGCAACAAATATTTATACCT+TGG | - | chr7_2:2812535-2812554 | Msa1044470:three_prime_UTR | 30.0% | |
| GTGTGTTAATAGTAGTATGT+AGG | + | chr7_2:2812662-2812681 | None:intergenic | 30.0% | |
| TGACATGAAACCTAAGAATA+AGG | + | chr7_2:2812684-2812703 | None:intergenic | 30.0% | |
| !! | TTGGATTTGGAAGCATTTAT+AGG | - | chr7_2:2812964-2812983 | Msa1044470:CDS | 30.0% |
| CACACAAGTTACTATACTAA+AGG | - | chr7_2:2813079-2813098 | Msa1044470:CDS | 30.0% | |
| TTGGAAGTGGATAATTGATT+TGG | + | chr7_2:2813345-2813364 | None:intergenic | 30.0% | |
| !!! | TATCACTACTTTTTTGGAAG+TGG | + | chr7_2:2813358-2813377 | None:intergenic | 30.0% |
| GAGAGAAAGTTGTAATAAAG+TGG | - | chr7_2:2813496-2813515 | Msa1044470:intron | 30.0% | |
| GTTGTAATAAAGTGGTTGTA+CGG | - | chr7_2:2813504-2813523 | Msa1044470:intron | 30.0% | |
| !! | GTTGTTCTCTAAAGTTTGTT+GGG | + | chr7_2:2813647-2813666 | None:intergenic | 30.0% |
| !! | AGTTGTTCTCTAAAGTTTGT+TGG | + | chr7_2:2813648-2813667 | None:intergenic | 30.0% |
| AATAGATTCCCGAAATTTCA+GGG | + | chr7_2:2814006-2814025 | None:intergenic | 30.0% | |
| AAATAGATTCCCGAAATTTC+AGG | + | chr7_2:2814007-2814026 | None:intergenic | 30.0% | |
| AATTTCGGGAATCTATTTGA+CGG | - | chr7_2:2814009-2814028 | Msa1044470:intron | 30.0% | |
| !!! | CCATTTTGAAATGAAGTAGT+AGG | + | chr7_2:2814066-2814085 | None:intergenic | 30.0% |
| CCTACTACTTCATTTCAAAA+TGG | - | chr7_2:2814063-2814082 | Msa1044470:intron | 30.0% | |
| ATAGTAGTAGGATAATCCAA+AGG | - | chr7_2:2814104-2814123 | Msa1044470:intron | 30.0% | |
| !!! | TGATTGCATATTTTGACCTT+TGG | + | chr7_2:2814123-2814142 | None:intergenic | 30.0% |
| TAGTTTGAATGAAAGACCTA+GGG | + | chr7_2:2814234-2814253 | None:intergenic | 30.0% | |
| ! | TTAGTTTGAATGAAAGACCT+AGG | + | chr7_2:2814235-2814254 | None:intergenic | 30.0% |
| CATTCATTAAATGACGTATG+TGG | - | chr7_2:2814757-2814776 | Msa1044470:intron | 30.0% | |
| AAAGTCTAAGTAGACATGAA+AGG | + | chr7_2:2814904-2814923 | None:intergenic | 30.0% | |
| TGTTATATAATTGAGGGATC+CGG | - | chr7_2:2815021-2815040 | Msa1044470:intron | 30.0% | |
| CTCCATAACACAAACATAAA+TGG | + | chr7_2:2815238-2815257 | None:intergenic | 30.0% | |
| !!! | TATTGCTAGCATTTTGACTA+CGG | + | chr7_2:2815403-2815422 | None:intergenic | 30.0% |
| ! | TCTAACATGTCTTCGAATTT+TGG | + | chr7_2:2815503-2815522 | None:intergenic | 30.0% |
| GTTAGAAAATTCATCGTCAT+CGG | - | chr7_2:2815517-2815536 | Msa1044470:intron | 30.0% | |
| ! | CTGCACCAATTTTTCATTAT+GGG | - | chr7_2:2815690-2815709 | Msa1044470:intron | 30.0% |
| TCAAGCCCATAATGAAAAAT+TGG | + | chr7_2:2815698-2815717 | None:intergenic | 30.0% | |
| TCACAGTTGTAAGAAATGAT+TGG | + | chr7_2:2815932-2815951 | None:intergenic | 30.0% | |
| TAATACGGGTCTTAATCACA+TGG | + | chr7_2:2812728-2812747 | None:intergenic | 35.0% | |
| GCGAGCAAACACATTTAATT+TGG | - | chr7_2:2812836-2812855 | Msa1044470:CDS | 35.0% | |
| TGGCTTCACATATTTGGATT+TGG | - | chr7_2:2812951-2812970 | Msa1044470:CDS | 35.0% | |
| ! | ACCAAACTAGTCTAGTTCAA+TGG | - | chr7_2:2813955-2813974 | Msa1044470:intron | 35.0% |
| ! | TCCATTGAACTAGACTAGTT+TGG | + | chr7_2:2813959-2813978 | None:intergenic | 35.0% |
| TGTATCTACCCCTGAAATTT+CGG | - | chr7_2:2813994-2814013 | Msa1044470:intron | 35.0% | |
| ATAGATTCCCGAAATTTCAG+GGG | + | chr7_2:2814005-2814024 | None:intergenic | 35.0% | |
| TGATATCATTCTTTCACCCT+AGG | - | chr7_2:2814215-2814234 | Msa1044470:intron | 35.0% | |
| ATTAATACGTCGTCATAGGT+GGG | + | chr7_2:2814266-2814285 | None:intergenic | 35.0% | |
| AATTAATACGTCGTCATAGG+TGG | + | chr7_2:2814267-2814286 | None:intergenic | 35.0% | |
| GTCAATTAATACGTCGTCAT+AGG | + | chr7_2:2814270-2814289 | None:intergenic | 35.0% | |
| CTTATGCAAGCTTATGAGTA+AGG | - | chr7_2:2814299-2814318 | Msa1044470:intron | 35.0% | |
| GCAAGGTTAAATTCCTTTCA+CGG | - | chr7_2:2814613-2814632 | Msa1044470:intron | 35.0% | |
| CAAGGTTAAATTCCTTTCAC+GGG | - | chr7_2:2814614-2814633 | Msa1044470:intron | 35.0% | |
| AAGGTTAAATTCCTTTCACG+GGG | - | chr7_2:2814615-2814634 | Msa1044470:intron | 35.0% | |
| ! | AAATTGTAATAGTGACGGGA+GGG | + | chr7_2:2814712-2814731 | None:intergenic | 35.0% |
| ! | TAAATTGTAATAGTGACGGG+AGG | + | chr7_2:2814713-2814732 | None:intergenic | 35.0% |
| CTGGATCTTAATCAAGAACT+TGG | - | chr7_2:2815431-2815450 | Msa1044470:intron | 35.0% | |
| GATCTTAATCAAGAACTTGG+TGG | - | chr7_2:2815434-2815453 | Msa1044470:intron | 35.0% | |
| ! | GCTGCACCAATTTTTCATTA+TGG | - | chr7_2:2815689-2815708 | Msa1044470:intron | 35.0% |
| ATGTTTAGACACCACCACAA+TGG | - | chr7_2:2812481-2812500 | Msa1044470:three_prime_UTR | 40.0% | |
| !! | TGGAAGTACCATAAGTTCCA+AGG | + | chr7_2:2812555-2812574 | None:intergenic | 40.0% |
| !!! | CATCATTTCTGCCATTTTCG+TGG | - | chr7_2:2812917-2812936 | Msa1044470:CDS | 40.0% |
| TACACCTTTGTCCACGAAAA+TGG | + | chr7_2:2812931-2812950 | None:intergenic | 40.0% | |
| !! | TTTTCGTGGACAAAGGTGTA+TGG | - | chr7_2:2812931-2812950 | Msa1044470:CDS | 40.0% |
| GGTGTATGGCTTCACATATT+TGG | - | chr7_2:2812945-2812964 | Msa1044470:CDS | 40.0% | |
| TACTCTTTCCATGTGTCATC+AGG | + | chr7_2:2813000-2813019 | None:intergenic | 40.0% | |
| !! | GAATTGCTTTTCCTCGTAGT+AGG | + | chr7_2:2813281-2813300 | None:intergenic | 40.0% |
| ACGAGGAAAAGCAATTCCAA+TGG | - | chr7_2:2813284-2813303 | Msa1044470:intron | 40.0% | |
| !! | TCATGTTAACTTGTGCCCTA+AGG | - | chr7_2:2813693-2813712 | Msa1044470:intron | 40.0% |
| !! | CATGTTAACTTGTGCCCTAA+GGG | - | chr7_2:2813694-2813713 | Msa1044470:intron | 40.0% |
| TTCCTTAACATGTGCCCTTA+GGG | + | chr7_2:2813711-2813730 | None:intergenic | 40.0% | |
| TTCTTAACATGTGCCCTTGA+GGG | - | chr7_2:2813825-2813844 | Msa1044470:intron | 40.0% | |
| !! | ATGTTAACTTGTGCCCTCAA+GGG | + | chr7_2:2813841-2813860 | None:intergenic | 40.0% |
| !! | AATGTTAACTTGTGCCCTCA+AGG | + | chr7_2:2813842-2813861 | None:intergenic | 40.0% |
| GTATCTACCCCTGAAATTTC+GGG | - | chr7_2:2813995-2814014 | Msa1044470:intron | 40.0% | |
| TCTTGATTGCATTTGAAGGC+AGG | + | chr7_2:2814037-2814056 | None:intergenic | 40.0% | |
| CCTCTCTTGATTGCATTTGA+AGG | + | chr7_2:2814041-2814060 | None:intergenic | 40.0% | |
| CCTTCAAATGCAATCAAGAG+AGG | - | chr7_2:2814038-2814057 | Msa1044470:intron | 40.0% | |
| GTCTAAGTAGACATGAAAGG+AGG | + | chr7_2:2814901-2814920 | None:intergenic | 40.0% | |
| ATGGCAGCAATAGAGTATAG+AGG | - | chr7_2:2815293-2815312 | Msa1044470:intron | 40.0% | |
| TGGCAGCAATAGAGTATAGA+GGG | - | chr7_2:2815294-2815313 | Msa1044470:intron | 40.0% | |
| TTACTATCGTCGTTGTCTTG+TGG | + | chr7_2:2815377-2815396 | None:intergenic | 40.0% | |
| TGCTAGCAATAATCAAGAGC+TGG | - | chr7_2:2815412-2815431 | Msa1044470:intron | 40.0% | |
| ! | CTTAATCAAGAACTTGGTGG+TGG | - | chr7_2:2815437-2815456 | Msa1044470:intron | 40.0% |
| ATAAGATCAGTCGAAGATGC+TGG | + | chr7_2:2815470-2815489 | None:intergenic | 40.0% | |
| TCAAATCAACCATTCCACGT+CGG | - | chr7_2:2815567-2815586 | Msa1044470:intron | 40.0% | |
| ACACCACCACAATGGAAGAT+GGG | - | chr7_2:2812489-2812508 | Msa1044470:three_prime_UTR | 45.0% | |
| !!! | TCTGCCATTTTCGTGGACAA+AGG | - | chr7_2:2812924-2812943 | Msa1044470:CDS | 45.0% |
| TCATGTGTCCTGATGACACA+TGG | - | chr7_2:2812989-2813008 | Msa1044470:CDS | 45.0% | |
| AAGTTGCAAGTCCTACTACG+AGG | - | chr7_2:2813267-2813286 | Msa1044470:intron | 45.0% | |
| GTTCCTTAACATGTGCCCTT+AGG | + | chr7_2:2813712-2813731 | None:intergenic | 45.0% | |
| CTTCTTAACATGTGCCCTTG+AGG | - | chr7_2:2813824-2813843 | Msa1044470:intron | 45.0% | |
| TGAAATGCTAACCCCGTGAA+AGG | + | chr7_2:2814629-2814648 | None:intergenic | 45.0% | |
| TCGTCGTTGTCTTGTGGTTT+AGG | + | chr7_2:2815371-2815390 | None:intergenic | 45.0% | |
| !! | GGAATGGTTGATTTGACAGG+CGG | + | chr7_2:2815563-2815582 | None:intergenic | 45.0% |
| !! | CGTGGAATGGTTGATTTGAC+AGG | + | chr7_2:2815566-2815585 | None:intergenic | 45.0% |
| GGGCTTGATGCTTGATTAGA+AGG | - | chr7_2:2815710-2815729 | Msa1044470:intron | 45.0% | |
| GCTCTTACGTGTCATCTTGT+TGG | + | chr7_2:2815956-2815975 | None:intergenic | 45.0% | |
| !!! | TTTTTTTATTTTGTTTTTAT+AGG | - | chr7_2:2812607-2812626 | Msa1044470:three_prime_UTR | 5.0% |
| !! | ATTTATATATAAAAAAGAAA+TGG | - | chr7_2:2814423-2814442 | Msa1044470:intron | 5.0% |
| GACACCACCACAATGGAAGA+TGG | - | chr7_2:2812488-2812507 | Msa1044470:three_prime_UTR | 50.0% | |
| CTTCCCATCTTCCATTGTGG+TGG | + | chr7_2:2812495-2812514 | None:intergenic | 50.0% | |
| GAGCTTCCCATCTTCCATTG+TGG | + | chr7_2:2812498-2812517 | None:intergenic | 50.0% | |
| GGAAGATGGGAAGCTCGAAT+TGG | - | chr7_2:2812502-2812521 | Msa1044470:three_prime_UTR | 50.0% | |
| ATGGGAAGCTCGAATTGGCA+GGG | - | chr7_2:2812507-2812526 | Msa1044470:three_prime_UTR | 50.0% | |
| GTGTTTGCTCGCTCACTCTT+TGG | + | chr7_2:2812828-2812847 | None:intergenic | 50.0% | |
| AGGTGCATTTAGTCGTGCAG+TGG | - | chr7_2:2813099-2813118 | Msa1044470:CDS | 50.0% | |
| GGTGCATTTAGTCGTGCAGT+GGG | - | chr7_2:2813100-2813119 | Msa1044470:CDS | 50.0% | |
| GTGCATTTAGTCGTGCAGTG+GGG | - | chr7_2:2813101-2813120 | Msa1044470:CDS | 50.0% | |
| ! | TGCCCTAAGGGCACATGTTA+AGG | - | chr7_2:2813706-2813725 | Msa1044470:intron | 50.0% |
| ! | TACGTCGTCATAGGTGGGTT+TGG | + | chr7_2:2814261-2814280 | None:intergenic | 50.0% |
| AGCAGCCACAGCTTATGACA+TGG | - | chr7_2:2815274-2815293 | Msa1044470:intron | 50.0% | |
| TGCTGCCATGTCATAAGCTG+TGG | + | chr7_2:2815282-2815301 | None:intergenic | 50.0% | |
| ATCAGTCGAAGATGCTGGTG+TGG | + | chr7_2:2815465-2815484 | None:intergenic | 50.0% | |
| !! | ATGGTTGATTTGACAGGCGG+TGG | + | chr7_2:2815560-2815579 | None:intergenic | 50.0% |
| TGGAAATGTCCGACGTGGAA+TGG | + | chr7_2:2815579-2815598 | None:intergenic | 50.0% | |
| ! | TCTTCTGGAAATGTCCGACG+TGG | + | chr7_2:2815584-2815603 | None:intergenic | 50.0% |
| GATGGGAAGCTCGAATTGGC+AGG | - | chr7_2:2812506-2812525 | Msa1044470:three_prime_UTR | 55.0% | |
| GCTCGAATTGGCAGGGTCTT+CGG | - | chr7_2:2812514-2812533 | Msa1044470:three_prime_UTR | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_2 | gene | 2812481 | 2816030 | 2812481 | ID=Msa1044470;Name=Msa1044470 |
| chr7_2 | mRNA | 2812481 | 2816030 | 2812481 | ID=Msa1044470-mRNA-1;Parent=Msa1044470;Name=Msa1044470-mRNA-1;_AED=0.07;_eAED=0.07;_QI=0|1|0.5|1|1|1|2|306|182 |
| chr7_2 | exon | 2812481 | 2813250 | 2812481 | ID=Msa1044470-mRNA-1:exon:758;Parent=Msa1044470-mRNA-1 |
| chr7_2 | exon | 2815946 | 2816030 | 2815946 | ID=Msa1044470-mRNA-1:exon:757;Parent=Msa1044470-mRNA-1 |
| chr7_2 | CDS | 2815946 | 2816030 | 2815946 | ID=Msa1044470-mRNA-1:cds;Parent=Msa1044470-mRNA-1 |
| chr7_2 | CDS | 2812787 | 2813250 | 2812787 | ID=Msa1044470-mRNA-1:cds;Parent=Msa1044470-mRNA-1 |
| chr7_2 | three_prime_UTR | 2812481 | 2812786 | 2812481 | ID=Msa1044470-mRNA-1:three_prime_utr;Parent=Msa1044470-mRNA-1 |
| Gene Sequence |
| Protein sequence |
