AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1416190

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1416190 MtrunA17_Chr1g0212191 97.583 331 6 1 1 331 1 329 0.0 659
Msa1416190 MtrunA17_Chr1g0212191 92.857 42 3 0 421 462 328 369 2.72e-18 86.3
Msa1416190 MtrunA17_Chr8g0343651 65.778 225 74 1 107 331 36 257 1.42e-105 315
Msa1416190 MtrunA17_Chr1g0146851 31.487 343 199 9 3 331 61 381 1.38e-42 155
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1416190 AT5G08580.1 58.263 357 116 4 1 331 1 350 1.72e-151 436
Msa1416190 AT5G08580.2 58.263 357 116 4 1 331 1 350 1.72e-151 436
Msa1416190 AT4G27790.2 32.927 328 190 9 3 327 1 301 7.82e-50 172
Msa1416190 AT4G27790.1 32.927 328 190 9 3 327 1 301 1.29e-48 170

Find 167 sgRNAs with CRISPR-Local

Find 589 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGCAGGATCCACATCGATTT+TGG 0.116408 tig0024333:-59041 None:intergenic
ATTGAACTACTGCCTATAAT+TGG 0.178697 tig0024333:+62146 Msa1416190:CDS
CTGAGACTAGCAACCTAATA+AGG 0.225455 tig0024333:-65517 None:intergenic
AACTCCATCGGTTGCGTTGT+GGG 0.250537 tig0024333:-63306 None:intergenic
TTCATGAAGTCTTCCCATTC+AGG 0.251226 tig0024333:-58953 None:intergenic
CTATTCTTTCAATTTGAATC+TGG 0.285986 tig0024333:+58647 Msa1416190:five_prime_UTR
TTTCCATGGGCTCTTTGATT+TGG 0.307800 tig0024333:+61899 Msa1416190:CDS
TCTGGAAATGCAATGGGTTT+AGG 0.309864 tig0024333:+58665 Msa1416190:exon
AGTAAACCATTCCAACAATT+TGG 0.311344 tig0024333:-63074 None:intergenic
ATTCATATTTATTTGCTGAT+AGG 0.327533 tig0024333:+65585 Msa1416190:three_prime_UTR
TTGATGTTTCGGCCCTTATT+AGG 0.328140 tig0024333:+65504 Msa1416190:three_prime_UTR
TGCTCACATGGGGTGGGCAA+TGG 0.334194 tig0024333:+63339 Msa1416190:CDS
TCTGCCTGTGTTGGGAGTCT+TGG 0.334900 tig0024333:+63049 Msa1416190:CDS
CACCTTTCTTTCCCAAGAAC+AGG 0.340939 tig0024333:-63020 None:intergenic
TGGATCATCTGGAGGGTAAT+AGG 0.343782 tig0024333:+65628 Msa1416190:three_prime_UTR
GCTCACATGGGGTGGGCAAT+GGG 0.350033 tig0024333:+63340 Msa1416190:CDS
TTGACCATCACGTTCCTAGA+TGG 0.354686 tig0024333:+65783 Msa1416190:three_prime_UTR
ATTTGTGATCATCGGATTGC+AGG 0.357207 tig0024333:+65958 Msa1416190:three_prime_UTR
CTGCCTGTGTTGGGAGTCTT+GGG 0.368395 tig0024333:+63050 Msa1416190:CDS
AATTGGTCAATATAGTTATA+TGG 0.374054 tig0024333:-65761 None:intergenic
GGATGGAGTTTCCCAATTAT+AGG 0.374598 tig0024333:-62158 None:intergenic
AATTGTTGGAATGGTTTACT+TGG 0.387707 tig0024333:+63077 Msa1416190:CDS
TCATCGTTCTCAAAGAGAAA+TGG 0.388892 tig0024333:+59129 Msa1416190:CDS
GGAGTTGCACCTGGATCATC+TGG 0.389552 tig0024333:+65617 Msa1416190:three_prime_UTR
CCATCATTCGGATAATTCAT+TGG 0.390327 tig0024333:+61956 Msa1416190:CDS
AGCTTCAACAATGGTTGTGC+AGG 0.394291 tig0024333:+60100 Msa1416190:CDS
CTTACAAAGCATTTATAAGA+AGG 0.394446 tig0024333:+65847 Msa1416190:three_prime_UTR
ACAGGGGAGAGGCCTGTTCT+TGG 0.395967 tig0024333:+63008 Msa1416190:intron
TTCGCGGTGGCGTTCGAGTT+CGG 0.404452 tig0024333:-58876 None:intergenic
TTTGTGCTGTTGCTATCAGC+TGG 0.406330 tig0024333:-60078 None:intergenic
CTGAGTATGATCCTCCTAGT+TGG 0.406429 tig0024333:+59191 Msa1416190:CDS
GGAAGAGTGGTGGTTGTTGA+AGG 0.407476 tig0024333:-58750 None:intergenic
GTGTTACTCTTAGTTCTCAT+TGG 0.409060 tig0024333:+65726 Msa1416190:three_prime_UTR
AGTTCCGATAAATTCATGTT+AGG 0.409707 tig0024333:+65327 Msa1416190:exon
GGTTGTGCAGGGAGGAAATC+AGG 0.412000 tig0024333:+60112 Msa1416190:CDS
CTCACCTAACATGAATTTAT+CGG 0.418264 tig0024333:-65331 None:intergenic
TAGGAACGTGATGGTCAAAT+TGG 0.424381 tig0024333:-65778 None:intergenic
ACCCCATGTGAGCATGAATT+CGG 0.429912 tig0024333:-63330 None:intergenic
GGACAGGTTGGTGAGAAGAA+TGG 0.437950 tig0024333:-58835 None:intergenic
GACAGGTTGGTGAGAAGAAT+GGG 0.438518 tig0024333:-58834 None:intergenic
TTTGAATCTGGAAATGCAAT+GGG 0.442858 tig0024333:+58659 Msa1416190:exon
GAAGTCTTCCCATTCAGGTT+GGG 0.442930 tig0024333:-58948 None:intergenic
TTGCTAGTCTCAGTCATGGT+GGG 0.448293 tig0024333:+65527 Msa1416190:three_prime_UTR
CTCACGAATCCCAACCTGAA+TGG 0.450548 tig0024333:+58939 Msa1416190:CDS
TCAGGTTGGGATTCGTGAGC+GGG 0.450871 tig0024333:-58935 None:intergenic
CAGGGGAGAGGCCTGTTCTT+GGG 0.453515 tig0024333:+63009 Msa1416190:intron
TTGAACTACTGCCTATAATT+GGG 0.454087 tig0024333:+62147 Msa1416190:CDS
CCAATGAATTATCCGAATGA+TGG 0.460938 tig0024333:-61956 None:intergenic
ACTCCATCGGTTGCGTTGTG+GGG 0.461009 tig0024333:-63305 None:intergenic
TGGATCTATCTGCCTGTGTT+GGG 0.461962 tig0024333:+63041 Msa1416190:CDS
CCGATGATCACAAATATACT+TGG 0.464370 tig0024333:-65950 None:intergenic
ATTCGTGAGCGGGAGCGTGC+TGG 0.465111 tig0024333:-58925 None:intergenic
CAACTCCATCGGTTGCGTTG+TGG 0.465561 tig0024333:-63307 None:intergenic
ATAAATCTTATAATCCATCT+AGG 0.466777 tig0024333:-65797 None:intergenic
GTTTGAGGCGGCGGTGACGG+TGG 0.468489 tig0024333:-58772 None:intergenic
ACGAGAGGGTCGAAGGGGAC+AGG 0.470057 tig0024333:-58851 None:intergenic
TCACGAATCCCAACCTGAAT+GGG 0.471276 tig0024333:+58940 Msa1416190:CDS
GGAGTTTGAGGCGGCGGTGA+CGG 0.475675 tig0024333:-58775 None:intergenic
TGAGTATGATCCTCCTAGTT+GGG 0.475881 tig0024333:+59192 Msa1416190:CDS
ATTTGAATCTGGAAATGCAA+TGG 0.480736 tig0024333:+58658 Msa1416190:exon
TATCAGCAAATAAATATGAA+TGG 0.482165 tig0024333:-65583 None:intergenic
GAGTCTTGGGACCAAATTGT+TGG 0.486073 tig0024333:+63063 Msa1416190:CDS
AGAAGGTTCGAGAGTGAAGT+TGG 0.486483 tig0024333:-58801 None:intergenic
GAAAATACCCGTCACCATCT+TGG 0.486734 tig0024333:-62013 None:intergenic
AATGTGGATTATGTGGAGTC+TGG 0.489088 tig0024333:+63276 Msa1416190:CDS
TAAATACACACTATGATTGA+AGG 0.493061 tig0024333:+58567 Msa1416190:five_prime_UTR
CCTAGTTGGGTTAAATCTGC+TGG 0.493560 tig0024333:+59205 Msa1416190:CDS
TTGGGACCAAATTGTTGGAA+TGG 0.493647 tig0024333:+63068 Msa1416190:CDS
TTCGGCGACGAGAGGGTCGA+AGG 0.499612 tig0024333:-58858 None:intergenic
TCACAATGACTCCCATCATT+CGG 0.500757 tig0024333:+61944 Msa1416190:CDS
TGAGACTAGCAACCTAATAA+GGG 0.501886 tig0024333:-65516 None:intergenic
TTTGAGGCGGCGGTGACGGT+GGG 0.504991 tig0024333:-58771 None:intergenic
TGAAGTTGGAACGGAGTTTG+AGG 0.509710 tig0024333:-58787 None:intergenic
CCAAGTATATTTGTGATCAT+CGG 0.509914 tig0024333:+65950 Msa1416190:three_prime_UTR
GAATTTATCGGAACTCATCA+TGG 0.509978 tig0024333:-65319 None:intergenic
CATAGTAATGCTCGGACGGA+TGG 0.511236 tig0024333:-62175 None:intergenic
GGGCAATGGGTTGATACCAC+TGG 0.511494 tig0024333:+63353 Msa1416190:CDS
TTTGCTGATAGGATCCATCA+TGG 0.513333 tig0024333:+65596 Msa1416190:three_prime_UTR
TGAAGGGAGAGTGTGAAGAG+AGG 0.513770 tig0024333:-58733 None:intergenic
ATCCATCATGGAGTTGCACC+TGG 0.514538 tig0024333:+65608 Msa1416190:three_prime_UTR
TAAGGATTCTCAATCATCTC+AGG 0.514900 tig0024333:-65245 None:intergenic
AAAGAAGAATATATAACTGA+TGG 0.515868 tig0024333:-65904 None:intergenic
CTTCATGATAAGAATCATGA+TGG 0.518005 tig0024333:+59154 Msa1416190:CDS
TGGAACGGAGTTTGAGGCGG+CGG 0.518813 tig0024333:-58781 None:intergenic
ATAGCACTATAAAATACATA+AGG 0.521974 tig0024333:-65263 None:intergenic
GAGTAACACTTAATTAATGA+TGG 0.522334 tig0024333:-65712 None:intergenic
TGCTAGTCTCAGTCATGGTG+GGG 0.522402 tig0024333:+65528 Msa1416190:three_prime_UTR
CCAGCAGATTTAACCCAACT+AGG 0.523932 tig0024333:-59205 None:intergenic
GGCCTGTTCTTGGGAAAGAA+AGG 0.526602 tig0024333:+63018 Msa1416190:CDS
GTTCCCATTGTTTGTCTTCG+CGG 0.528890 tig0024333:-58892 None:intergenic
GAATTCATGCTCACATGGGG+TGG 0.529165 tig0024333:+63332 Msa1416190:CDS
TTGCCGAATTCATGCTCACA+TGG 0.529785 tig0024333:+63327 Msa1416190:CDS
GGCGGTGACGGTGGGAAGAG+TGG 0.529859 tig0024333:-58763 None:intergenic
GCATCTGATGCAGATGGAAA+TGG 0.530224 tig0024333:+59905 Msa1416190:CDS
TTTAATGCATCTGATGCAGA+TGG 0.530523 tig0024333:+59899 Msa1416190:CDS
CCACCGCGAAGACAAACAAT+GGG 0.530716 tig0024333:+58889 Msa1416190:CDS
TGAAGTCTTCCCATTCAGGT+TGG 0.530720 tig0024333:-58949 None:intergenic
TTGCTTTGCATAGTAATGCT+CGG 0.531273 tig0024333:-62183 None:intergenic
AAAGAGACTCAGACAGAGAT+GGG 0.535960 tig0024333:+61856 Msa1416190:CDS
GTTCGAGTTCGGCGACGAGA+GGG 0.536969 tig0024333:-58865 None:intergenic
GTGGATCTATCTGCCTGTGT+TGG 0.537134 tig0024333:+63040 Msa1416190:CDS
TACCTTTGGTGCTTCTCCAG+TGG 0.538293 tig0024333:-63369 None:intergenic
CAATGAATTATCCGAATGAT+GGG 0.540410 tig0024333:-61955 None:intergenic
TTGGTGAGAAGAATGGGAAC+GGG 0.541327 tig0024333:-58828 None:intergenic
CATGAATTCGGCAACTCCAT+CGG 0.542291 tig0024333:-63318 None:intergenic
TCGGCGACGAGAGGGTCGAA+GGG 0.543583 tig0024333:-58857 None:intergenic
GAAAGAGACTCAGACAGAGA+TGG 0.546286 tig0024333:+61855 Msa1416190:CDS
GTATTTATGTATCAGATACA+TGG 0.546963 tig0024333:-58551 None:intergenic
AGATCAACAAAATCATCAGC+AGG 0.550144 tig0024333:-59058 None:intergenic
CTCCATCGGTTGCGTTGTGG+GGG 0.551010 tig0024333:-63304 None:intergenic
GACAAGGAGTCTGAATTTGA+AGG 0.553959 tig0024333:+65463 Msa1416190:three_prime_UTR
ATTGTTGGAATGGTTTACTT+GGG 0.555145 tig0024333:+63078 Msa1416190:CDS
AGCTTGACCAAGATGGTGAC+GGG 0.555638 tig0024333:+62006 Msa1416190:CDS
TTACCAAATCAAAGAGCCCA+TGG 0.557051 tig0024333:-61902 None:intergenic
ATCAGAATATATCATTTCAC+AGG 0.557494 tig0024333:+62208 Msa1416190:CDS
TAGGTTGCTAGTCTCAGTCA+TGG 0.561221 tig0024333:+65523 Msa1416190:three_prime_UTR
TGAATTTGAAGGTTATGAGA+TGG 0.562166 tig0024333:+65474 Msa1416190:three_prime_UTR
ATGATCACAAATATACTTGG+AGG 0.562208 tig0024333:-65947 None:intergenic
AGACTCAGACAGAGATGGGA+AGG 0.562489 tig0024333:+61860 Msa1416190:CDS
ATCCAGGTGCAACTCCATGA+TGG 0.562634 tig0024333:-65610 None:intergenic
TTGTGCTGTTGCTATCAGCT+GGG 0.563487 tig0024333:-60077 None:intergenic
TATTACCCTCCAGATGATCC+AGG 0.565032 tig0024333:-65626 None:intergenic
TTGGCTATGATATGGGTTGG+TGG 0.566373 tig0024333:+59864 Msa1416190:CDS
AAATCAAGATTTACGACGAA+GGG 0.568463 tig0024333:+63223 Msa1416190:CDS
TTCAGGTTGGGATTCGTGAG+CGG 0.568927 tig0024333:-58936 None:intergenic
AAGAAGAATATATAACTGAT+GGG 0.572648 tig0024333:-65903 None:intergenic
GCCACCGCGAAGACAAACAA+TGG 0.573423 tig0024333:+58888 Msa1416190:CDS
TAAGCAAAATGAGTGTGACT+TGG 0.577158 tig0024333:-65828 None:intergenic
CAGCTTGACCAAGATGGTGA+CGG 0.583818 tig0024333:+62005 Msa1416190:CDS
GAAGAGTGGTGGTTGTTGAA+GGG 0.587523 tig0024333:-58749 None:intergenic
GTTGCTAGTCTCAGTCATGG+TGG 0.588895 tig0024333:+65526 Msa1416190:three_prime_UTR
CGTTCGAGTTCGGCGACGAG+AGG 0.590664 tig0024333:-58866 None:intergenic
TTTGCTCAGCTTGACCAAGA+TGG 0.591931 tig0024333:+61999 Msa1416190:CDS
TAGGGGTTATGACAGGGGAG+AGG 0.596496 tig0024333:+62997 Msa1416190:intron
ATCTTCATGAGTTGACTATG+TGG 0.597497 tig0024333:+59077 Msa1416190:CDS
GTTGGAATGGTTTACTTGGG+CGG 0.598320 tig0024333:+63081 Msa1416190:CDS
TGAAGGTGAGTTGAATTGAA+AGG 0.598470 tig0024333:+58584 Msa1416190:five_prime_UTR
TGCCGAATTCATGCTCACAT+GGG 0.598704 tig0024333:+63328 Msa1416190:CDS
GTTGGTGAGAAGAATGGGAA+CGG 0.602731 tig0024333:-58829 None:intergenic
TTTGCATAGTAATGCTCGGA+CGG 0.602855 tig0024333:-62179 None:intergenic
GAGGGTCGAAGGGGACAGGT+TGG 0.604316 tig0024333:-58847 None:intergenic
TAATCCATCTAGGAACGTGA+TGG 0.609715 tig0024333:-65787 None:intergenic
CCCATTGTTTGTCTTCGCGG+TGG 0.609991 tig0024333:-58889 None:intergenic
GTTCGAGAGTGAAGTTGGAA+CGG 0.611091 tig0024333:-58796 None:intergenic
AATTCATGCTCACATGGGGT+GGG 0.611809 tig0024333:+63333 Msa1416190:CDS
AAATGCAATGGGTTTAGGAT+CGG 0.611955 tig0024333:+58670 Msa1416190:exon
GAATGGGAACGGGAATGAGA+AGG 0.615322 tig0024333:-58818 None:intergenic
GGTGACGGTGGGAAGAGTGG+TGG 0.620742 tig0024333:-58760 None:intergenic
GCTTCAACAATGGTTGTGCA+GGG 0.627087 tig0024333:+60101 Msa1416190:CDS
AAGCAAAATGAGTGTGACTT+GGG 0.628858 tig0024333:-65827 None:intergenic
ACAGCACAAAGCTTCAACAA+TGG 0.631286 tig0024333:+60091 Msa1416190:CDS
CAATCATCTCAGGCAAAGTG+AGG 0.632579 tig0024333:-65235 None:intergenic
TACCACTGGAGAAGCACCAA+AGG 0.636104 tig0024333:+63367 Msa1416190:CDS
GCCGAATTCATGCTCACATG+GGG 0.640417 tig0024333:+63329 Msa1416190:CDS
GTTGCACCTGGATCATCTGG+AGG 0.641210 tig0024333:+65620 Msa1416190:three_prime_UTR
AGTTGGAACGGAGTTTGAGG+CGG 0.642114 tig0024333:-58784 None:intergenic
CTGTTCTTGGGAAAGAAAGG+TGG 0.653440 tig0024333:+63021 Msa1416190:CDS
GGTCCCAAGACTCCCAACAC+AGG 0.661531 tig0024333:-63053 None:intergenic
TTGCACCTGGATCATCTGGA+GGG 0.671751 tig0024333:+65621 Msa1416190:three_prime_UTR
GCAGATTTAACCCAACTAGG+AGG 0.674034 tig0024333:-59202 None:intergenic
CGGCGACGAGAGGGTCGAAG+GGG 0.676699 tig0024333:-58856 None:intergenic
TCTTCAACAAGCTCATAGAG+AGG 0.679859 tig0024333:+59102 Msa1416190:CDS
AAGGGGAGCAGTGCTTCATG+CGG 0.680185 tig0024333:+63241 Msa1416190:CDS
TTGAAACAATATCAGTGACA+AGG 0.683430 tig0024333:+65447 Msa1416190:three_prime_UTR
AATCAAGATTTACGACGAAG+GGG 0.692679 tig0024333:+63224 Msa1416190:CDS
GAAATCAAGATTTACGACGA+AGG 0.695059 tig0024333:+63222 Msa1416190:CDS
TCAACAATGGTTGTGCAGGG+AGG 0.695959 tig0024333:+60104 Msa1416190:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATATTGAAATAAATTTTGT+AGG + tig0024333:61670-61689 Msa1416190:intron 10.0%
!! AAAAAAAAAAAAAGAAAAGT+AGG + tig0024333:64423-64442 Msa1416190:intron 10.0%
!! TATAAAAAAAAAAATATCTG+GGG - tig0024333:65878-65897 None:intergenic 10.0%
!! CTTATAAAAAAAAAAATATC+TGG - tig0024333:65880-65899 None:intergenic 10.0%
!! TCATATGTATTACAAATAAA+TGG + tig0024333:60768-60787 Msa1416190:intron 15.0%
!! CATATGTATTACAAATAAAT+GGG + tig0024333:60769-60788 Msa1416190:intron 15.0%
!! ATATGTATTACAAATAAATG+GGG + tig0024333:60770-60789 Msa1416190:intron 15.0%
!! AAGTTAGAAAATTTATTCTT+TGG + tig0024333:60933-60952 Msa1416190:intron 15.0%
!! TTTCTCTATAAAGAAATAAA+AGG - tig0024333:61839-61858 None:intergenic 15.0%
!! AACTGAAATGTATAATATAA+AGG + tig0024333:62427-62446 Msa1416190:intron 15.0%
!! TAGATAAATAAATAGATGAA+TGG + tig0024333:62864-62883 Msa1416190:intron 15.0%
!! CAAATTATTTAGACTAATTT+GGG - tig0024333:63467-63486 None:intergenic 15.0%
!! TCAAATTATTTAGACTAATT+TGG - tig0024333:63468-63487 None:intergenic 15.0%
!!! TTTTAATTGTTATAACTTCT+TGG + tig0024333:64592-64611 Msa1416190:intron 15.0%
!! TTTAATTGTTATAACTTCTT+GGG + tig0024333:64593-64612 Msa1416190:intron 15.0%
!!! TTTTTAAGAATATGATATAC+TGG + tig0024333:64809-64828 Msa1416190:intron 15.0%
!!! TTTCCTTTTATAATATCTTA+GGG + tig0024333:64914-64933 Msa1416190:intron 15.0%
!!! AATACGCAATTTTTTTTTTG+TGG + tig0024333:58386-58405 Msa1416190:five_prime_UTR 20.0%
!!! AATAAAATATGCAAAGGTAT+GGG - tig0024333:58428-58447 None:intergenic 20.0%
!! AAATAAAATATGCAAAGGTA+TGG - tig0024333:58429-58448 None:intergenic 20.0%
!! GCATAAAATAAAATATGCAA+AGG - tig0024333:58434-58453 None:intergenic 20.0%
!! AAGAAAAATAGATTAGATAG+AGG + tig0024333:59530-59549 Msa1416190:intron 20.0%
!! TTTCTTAATAGTTTCTCTTA+TGG - tig0024333:59594-59613 None:intergenic 20.0%
!!! TTTTCAGATAAAGAATCTTT+TGG + tig0024333:59845-59864 Msa1416190:intron 20.0%
!! ACTAATAAATGTACTATACA+GGG - tig0024333:60243-60262 None:intergenic 20.0%
!! AACTAATAAATGTACTATAC+AGG - tig0024333:60244-60263 None:intergenic 20.0%
!! ATGAATTACCATTTCATATT+TGG + tig0024333:60419-60438 Msa1416190:intron 20.0%
!! ATGTATTCACAATCTTAAAT+AGG + tig0024333:60507-60526 Msa1416190:intron 20.0%
!! TAATTGACAATATAGTTGTT+CGG + tig0024333:60741-60760 Msa1416190:intron 20.0%
!!! TTTCCCATATTTCTAATATT+GGG - tig0024333:61704-61723 None:intergenic 20.0%
!!! ATTTCCCATATTTCTAATAT+TGG - tig0024333:61705-61724 None:intergenic 20.0%
!!! TTTTATTTTACTGAAGTGAA+TGG + tig0024333:61747-61766 Msa1416190:intron 20.0%
!!! TTTATTTTACTGAAGTGAAT+GGG + tig0024333:61748-61767 Msa1416190:intron 20.0%
!! AGTACATTAATGATGAAAAA+AGG - tig0024333:62038-62057 None:intergenic 20.0%
!! TGACTATTTCAAATTAGAAA+TGG + tig0024333:62608-62627 Msa1416190:intron 20.0%
!!! CTTTTACTCTGTTTTTATTT+TGG - tig0024333:62668-62687 None:intergenic 20.0%
!! AAATAAAAACAGAGTAAAAG+TGG + tig0024333:62668-62687 Msa1416190:intron 20.0%
!!! TATTTTATTGGAAGGATAAA+GGG + tig0024333:62784-62803 Msa1416190:intron 20.0%
!!! ACTATCAACAGTAATTATTT+TGG - tig0024333:62817-62836 None:intergenic 20.0%
!! TAAATAAATAGATGAATGGT+AGG + tig0024333:62868-62887 Msa1416190:intron 20.0%
!! AAATAAATAGATGAATGGTA+GGG + tig0024333:62869-62888 Msa1416190:intron 20.0%
!! TATTAGATCTTAGAAAAAGT+AGG + tig0024333:62902-62921 Msa1416190:intron 20.0%
!! AGTCTAAATAATTTGATTCA+CGG + tig0024333:63472-63491 Msa1416190:intron 20.0%
!! TTAATTGTTATAACTTCTTG+GGG + tig0024333:64594-64613 Msa1416190:intron 20.0%
!! GATGATAAAATCAATTTACA+AGG - tig0024333:64622-64641 None:intergenic 20.0%
!! AATTGGAGAAAAAGAATATA+TGG - tig0024333:64644-64663 None:intergenic 20.0%
!!! TATTCTTTTTCTCCAATTTA+CGG + tig0024333:64646-64665 Msa1416190:intron 20.0%
!! TTCTTAAAAACAATTTCTCT+AGG - tig0024333:64799-64818 None:intergenic 20.0%
!! GATATTATAAAAGGAAACAT+TGG - tig0024333:64911-64930 None:intergenic 20.0%
!!! GTTTCCTTTTATAATATCTT+AGG + tig0024333:64913-64932 Msa1416190:intron 20.0%
!! TATGAATTGCTAAATATTGT+AGG + tig0024333:64948-64967 Msa1416190:intron 20.0%
!! CCTGTTATAAAATTATACAA+TGG - tig0024333:65193-65212 None:intergenic 20.0%
!!! CCATTGTATAATTTTATAAC+AGG + tig0024333:65190-65209 Msa1416190:intron 20.0%
!! ATAGCACTATAAAATACATA+AGG - tig0024333:65266-65285 None:intergenic 20.0%
!! TATCAGCAAATAAATATGAA+TGG - tig0024333:65586-65605 None:intergenic 20.0%
!!! ATTCATATTTATTTGCTGAT+AGG + tig0024333:65585-65604 Msa1416190:three_prime_UTR 20.0%
!! AATTGGTCAATATAGTTATA+TGG - tig0024333:65764-65783 None:intergenic 20.0%
!! ATAAATCTTATAATCCATCT+AGG - tig0024333:65800-65819 None:intergenic 20.0%
!! AAGAAGAATATATAACTGAT+GGG - tig0024333:65906-65925 None:intergenic 20.0%
!! AAAGAAGAATATATAACTGA+TGG - tig0024333:65907-65926 None:intergenic 20.0%
!!! AATTTTTTTTTTGTGGTAGC+CGG + tig0024333:58393-58412 Msa1416190:intron 25.0%
!! ATAAAATATGCAAAGGTATG+GGG - tig0024333:58427-58446 None:intergenic 25.0%
! GTATTTATGTATCAGATACA+TGG - tig0024333:58554-58573 None:intergenic 25.0%
! TAAATACACACTATGATTGA+AGG + tig0024333:58567-58586 Msa1416190:five_prime_UTR 25.0%
! CTATTCTTTCAATTTGAATC+TGG + tig0024333:58647-58666 Msa1416190:five_prime_UTR 25.0%
!!! TAGATATGATGATGTTTTGT+TGG + tig0024333:59352-59371 Msa1416190:intron 25.0%
!!! AGTTTCTCTTATGGTTTTTT+AGG - tig0024333:59585-59604 None:intergenic 25.0%
! TGGTTTATGATAGAACATTA+TGG + tig0024333:59645-59664 Msa1416190:intron 25.0%
! AAGAATAAGTGATTTCTGTT+TGG + tig0024333:60188-60207 Msa1416190:intron 25.0%
! CTAATAAATGTACTATACAG+GGG - tig0024333:60242-60261 None:intergenic 25.0%
! TGAAATGGTAATTCATTATC+AGG - tig0024333:60415-60434 None:intergenic 25.0%
! ATATGCATTACAAAATACGT+GGG + tig0024333:60548-60567 Msa1416190:intron 25.0%
! GCAGTATATAAATAACAAGT+GGG - tig0024333:60693-60712 None:intergenic 25.0%
!!! TTGTCAATTAGTTGCTATTT+GGG - tig0024333:60731-60750 None:intergenic 25.0%
!! ATTGTCAATTAGTTGCTATT+TGG - tig0024333:60732-60751 None:intergenic 25.0%
! ACCAACTTATTTGTAATAGT+GGG - tig0024333:61064-61083 None:intergenic 25.0%
! TACCAACTTATTTGTAATAG+TGG - tig0024333:61065-61084 None:intergenic 25.0%
! TAATCAACATCTAGATATTG+AGG - tig0024333:61236-61255 None:intergenic 25.0%
! AATATATCCTTAATAATGCC+CGG + tig0024333:61439-61458 Msa1416190:intron 25.0%
! CATTCAACTTAAATCCTAAT+TGG - tig0024333:61542-61561 None:intergenic 25.0%
! TGAATGTTTAAATCATCTGT+TGG + tig0024333:61556-61575 Msa1416190:intron 25.0%
! GAATGTTTAAATCATCTGTT+GGG + tig0024333:61557-61576 Msa1416190:intron 25.0%
! CAAAATTCGAAAAATAACCA+TGG - tig0024333:61615-61634 None:intergenic 25.0%
!! AACTTCAAAGAATTTTTCCA+TGG + tig0024333:61885-61904 Msa1416190:CDS 25.0%
!! ACTTCAAAGAATTTTTCCAT+GGG + tig0024333:61886-61905 Msa1416190:CDS 25.0%
! ATCAGAATATATCATTTCAC+AGG + tig0024333:62208-62227 Msa1416190:CDS 25.0%
! ATATATCATTTCACAGGTAT+TGG + tig0024333:62214-62233 Msa1416190:intron 25.0%
!!! TAAGAGTGTAAAGTATTGTA+TGG - tig0024333:62246-62265 None:intergenic 25.0%
! ATGTGAAGTCATATGAATAT+AGG + tig0024333:62293-62312 Msa1416190:intron 25.0%
!! TTTGATAGCTATAGAACTAT+GGG - tig0024333:62323-62342 None:intergenic 25.0%
!! ATTTGATAGCTATAGAACTA+TGG - tig0024333:62324-62343 None:intergenic 25.0%
! CTATCAAATCACAATTCAAA+CGG + tig0024333:62335-62354 Msa1416190:intron 25.0%
!!! TGGCTTCTGAAATATAATTA+TGG - tig0024333:62648-62667 None:intergenic 25.0%
! TTCAATTACTTGCTCAAAAA+GGG - tig0024333:62738-62757 None:intergenic 25.0%
! ATTCAATTACTTGCTCAAAA+AGG - tig0024333:62739-62758 None:intergenic 25.0%
!! GTATTTTATTGGAAGGATAA+AGG + tig0024333:62783-62802 Msa1416190:intron 25.0%
!!! ATTACTGTTGATAGTTACAA+TGG + tig0024333:62822-62841 Msa1416190:intron 25.0%
! ATCTTAGAAAAAGTAGGATT+AGG + tig0024333:62908-62927 Msa1416190:intron 25.0%
! TCTTAGAAAAAGTAGGATTA+GGG + tig0024333:62909-62928 Msa1416190:intron 25.0%
!! AGATCTTGGAAATCATTTTA+AGG + tig0024333:62972-62991 Msa1416190:intron 25.0%
!!! TGGAAATCATTTTAAGGAAT+AGG + tig0024333:62978-62997 Msa1416190:intron 25.0%
!!! GGAAATCATTTTAAGGAATA+GGG + tig0024333:62979-62998 Msa1416190:intron 25.0%
!!! GAAATCATTTTAAGGAATAG+GGG + tig0024333:62980-62999 Msa1416190:intron 25.0%
!!! TTTTAAGAACTTTTGTCTCA+AGG - tig0024333:63852-63871 None:intergenic 25.0%
! TTCTTGTCATTCAATAAACT+CGG - tig0024333:63927-63946 None:intergenic 25.0%
! TAAATATCATAAAGTACAGC+TGG - tig0024333:64352-64371 None:intergenic 25.0%
! ATTTATTGCTTATACCATAC+TGG + tig0024333:64367-64386 Msa1416190:intron 25.0%
!!! CATATTTTGAAGAGATCAAA+GGG - tig0024333:64479-64498 None:intergenic 25.0%
!!! TCATATTTTGAAGAGATCAA+AGG - tig0024333:64480-64499 None:intergenic 25.0%
! TCTTCAAAATATGAATCTGT+CGG + tig0024333:64486-64505 Msa1416190:intron 25.0%
!! ATTCTGAAAGAATTCAGAAT+GGG - tig0024333:64521-64540 None:intergenic 25.0%
! TAATTGTTATAACTTCTTGG+GGG + tig0024333:64595-64614 Msa1416190:intron 25.0%
! AAAATTAGTTCAATGCATCT+AGG - tig0024333:65041-65060 None:intergenic 25.0%
! GAGTAACACTTAATTAATGA+TGG - tig0024333:65715-65734 None:intergenic 25.0%
!! CTTACAAAGCATTTATAAGA+AGG + tig0024333:65847-65866 Msa1416190:three_prime_UTR 25.0%
!!! ATTTTTTTTTTGTGGTAGCC+GGG + tig0024333:58394-58413 Msa1416190:intron 30.0%
ATTTGAATCTGGAAATGCAA+TGG + tig0024333:58658-58677 Msa1416190:exon 30.0%
TTTGAATCTGGAAATGCAAT+GGG + tig0024333:58659-58678 Msa1416190:exon 30.0%
GAGGAAAAAGAGAACAATTA+GGG - tig0024333:58717-58736 None:intergenic 30.0%
AGAGGAAAAAGAGAACAATT+AGG - tig0024333:58718-58737 None:intergenic 30.0%
CTTCATGATAAGAATCATGA+TGG + tig0024333:59154-59173 Msa1416190:CDS 30.0%
AACTATAGTAGAAAAGATGG+TGG + tig0024333:59447-59466 Msa1416190:intron 30.0%
AGATCTAGATATTATTGCGT+TGG + tig0024333:59613-59632 Msa1416190:intron 30.0%
TATTGCGTTGGATCAAAATA+TGG + tig0024333:59625-59644 Msa1416190:intron 30.0%
!! AGAATCTTTTGGCTATGATA+TGG + tig0024333:59856-59875 Msa1416190:CDS 30.0%
!! GAATCTTTTGGCTATGATAT+GGG + tig0024333:59857-59876 Msa1416190:CDS 30.0%
ACTTTGTTACAGCTCAATAT+TGG + tig0024333:60158-60177 Msa1416190:intron 30.0%
TCTTAAATAGGAAAGCTGTT+AGG + tig0024333:60519-60538 Msa1416190:intron 30.0%
! CGTATTTTGTAATGCATATC+AGG - tig0024333:60547-60566 None:intergenic 30.0%
GATATGCATTACAAAATACG+TGG + tig0024333:60547-60566 Msa1416190:intron 30.0%
TATGCATTACAAAATACGTG+GGG + tig0024333:60549-60568 Msa1416190:intron 30.0%
ATCTCCCTAAATTGAAGATA+TGG + tig0024333:60577-60596 Msa1416190:intron 30.0%
TCTCCCTAAATTGAAGATAT+GGG + tig0024333:60578-60597 Msa1416190:intron 30.0%
AACCCCATATCTTCAATTTA+GGG - tig0024333:60584-60603 None:intergenic 30.0%
GGCAGTATATAAATAACAAG+TGG - tig0024333:60694-60713 None:intergenic 30.0%
!! TTCCAATGTTTTTATTGCCA+AGG + tig0024333:60991-61010 Msa1416190:intron 30.0%
CCAACTTATTTGTAATAGTG+GGG - tig0024333:61063-61082 None:intergenic 30.0%
ATATATCCTTAATAATGCCC+GGG + tig0024333:61440-61459 Msa1416190:intron 30.0%
TTAAATCCTAATTGGTTGCA+TGG - tig0024333:61534-61553 None:intergenic 30.0%
ATTGTAGTTTCTCCTAAACT+AGG - tig0024333:61653-61672 None:intergenic 30.0%
TGTGCCCAATATTAGAAATA+TGG + tig0024333:61697-61716 Msa1416190:intron 30.0%
GTGCCCAATATTAGAAATAT+GGG + tig0024333:61698-61717 Msa1416190:intron 30.0%
CAATGAATTATCCGAATGAT+GGG - tig0024333:61958-61977 None:intergenic 30.0%
!! GTACTTTCTTTGAAACACTA+TGG + tig0024333:62053-62072 Msa1416190:intron 30.0%
ATTGAACTACTGCCTATAAT+TGG + tig0024333:62146-62165 Msa1416190:CDS 30.0%
TTGAACTACTGCCTATAATT+GGG + tig0024333:62147-62166 Msa1416190:CDS 30.0%
ACACACTAACTACTAACATT+TGG - tig0024333:62481-62500 None:intergenic 30.0%
TAGTTAGTGTGTTATGTTAG+TGG + tig0024333:62489-62508 Msa1416190:intron 30.0%
GTAAAAGTGGTAGCTAATTA+AGG + tig0024333:62681-62700 Msa1416190:intron 30.0%
!!! TTTTCTAAGATCTAATACCC+TGG - tig0024333:62899-62918 None:intergenic 30.0%
AGTAAACCATTCCAACAATT+TGG - tig0024333:63077-63096 None:intergenic 30.0%
AATTGTTGGAATGGTTTACT+TGG + tig0024333:63077-63096 Msa1416190:CDS 30.0%
ATTGTTGGAATGGTTTACTT+GGG + tig0024333:63078-63097 Msa1416190:CDS 30.0%
TATAGTTCTTGCATCTATGA+AGG - tig0024333:63133-63152 None:intergenic 30.0%
TAGATGCAAGAACTATATAC+AGG + tig0024333:63136-63155 Msa1416190:intron 30.0%
AGATGCAAGAACTATATACA+GGG + tig0024333:63137-63156 Msa1416190:intron 30.0%
AAATCAAGATTTACGACGAA+GGG + tig0024333:63223-63242 Msa1416190:CDS 30.0%
! TCCAAAAAATGTGGATTATG+TGG + tig0024333:63269-63288 Msa1416190:CDS 30.0%
!!! TCCACATAATCCACATTTTT+TGG - tig0024333:63273-63292 None:intergenic 30.0%
GAACATAATTCTGACCTATT+TGG + tig0024333:63436-63455 Msa1416190:intron 30.0%
CTAAATAATTTGATTCACGG+AGG + tig0024333:63475-63494 Msa1416190:intron 30.0%
CATAAACCATTCTCTTATGT+GGG + tig0024333:63579-63598 Msa1416190:intron 30.0%
ATAAACCATTCTCTTATGTG+GGG + tig0024333:63580-63599 Msa1416190:intron 30.0%
GAGTTTATTGAATGACAAGA+AGG + tig0024333:63926-63945 Msa1416190:intron 30.0%
!! TCATACATTTGCTATTGAGT+TGG - tig0024333:64026-64045 None:intergenic 30.0%
AGAGAATGGAATTATAAGGT+GGG - tig0024333:64074-64093 None:intergenic 30.0%
TAGAGAATGGAATTATAAGG+TGG - tig0024333:64075-64094 None:intergenic 30.0%
TGGTAGAGAATGGAATTATA+AGG - tig0024333:64078-64097 None:intergenic 30.0%
! AATTGTTGCTTCTGATATGT+TGG - tig0024333:64272-64291 None:intergenic 30.0%
AAAAAAAGTAGCAACCAGTA+TGG - tig0024333:64384-64403 None:intergenic 30.0%
! CATTCTGAAAGAATTCAGAA+TGG - tig0024333:64522-64541 None:intergenic 30.0%
ATGTTTATGGTAGTTACTGA+TGG + tig0024333:64699-64718 Msa1416190:intron 30.0%
GCACCCTAAGATATTATAAA+AGG - tig0024333:64920-64939 None:intergenic 30.0%
TCGTGCTTAATTTACATGTT+AGG + tig0024333:65007-65026 Msa1416190:intron 30.0%
! GAACTAATTTTTCCTGACTA+TGG + tig0024333:65050-65069 Msa1416190:intron 30.0%
TGATGCAATTCAATAGATGT+TGG - tig0024333:65148-65167 None:intergenic 30.0%
AGTTCCGATAAATTCATGTT+AGG + tig0024333:65327-65346 Msa1416190:exon 30.0%
CTCACCTAACATGAATTTAT+CGG - tig0024333:65334-65353 None:intergenic 30.0%
TTGAAACAATATCAGTGACA+AGG + tig0024333:65447-65466 Msa1416190:three_prime_UTR 30.0%
TGAATTTGAAGGTTATGAGA+TGG + tig0024333:65474-65493 Msa1416190:three_prime_UTR 30.0%
! TAGAGATTTTCAAATCACAC+TGG + tig0024333:65684-65703 Msa1416190:three_prime_UTR 30.0%
ATGATCACAAATATACTTGG+AGG - tig0024333:65950-65969 None:intergenic 30.0%
CCAAGTATATTTGTGATCAT+CGG + tig0024333:65950-65969 Msa1416190:three_prime_UTR 30.0%
! TGAAGGTGAGTTGAATTGAA+AGG + tig0024333:58584-58603 Msa1416190:five_prime_UTR 35.0%
! AAATGCAATGGGTTTAGGAT+CGG + tig0024333:58670-58689 Msa1416190:exon 35.0%
! TCTTTTTCCCAAAATCGATG+TGG + tig0024333:59033-59052 Msa1416190:CDS 35.0%
AGATCAACAAAATCATCAGC+AGG - tig0024333:59061-59080 None:intergenic 35.0%
! ATCTTCATGAGTTGACTATG+TGG + tig0024333:59077-59096 Msa1416190:CDS 35.0%
TCATCGTTCTCAAAGAGAAA+TGG + tig0024333:59129-59148 Msa1416190:CDS 35.0%
!! ATGATGTTTTGTTGGATGTG+TGG + tig0024333:59360-59379 Msa1416190:intron 35.0%
TTTCATTAGAGAGAGAGAGT+TGG + tig0024333:59413-59432 Msa1416190:intron 35.0%
CGCAACTATAGTAGAAAAGA+TGG + tig0024333:59444-59463 Msa1416190:intron 35.0%
!! TAGAAAAGATGGTGGAAACT+AGG + tig0024333:59455-59474 Msa1416190:intron 35.0%
AAACTAGGCTTATGTGGTTT+GGG + tig0024333:59470-59489 Msa1416190:intron 35.0%
TATAGTGATTACTGTCTCTG+TGG + tig0024333:59786-59805 Msa1416190:intron 35.0%
TTTAATGCATCTGATGCAGA+TGG + tig0024333:59899-59918 Msa1416190:CDS 35.0%
ATATGCAAGTGTAAACAACG+AGG - tig0024333:59989-60008 None:intergenic 35.0%
TCATTATCAGGAGAATGCAA+TGG - tig0024333:60403-60422 None:intergenic 35.0%
GTAGAAGGCCAAATATGAAA+TGG - tig0024333:60430-60449 None:intergenic 35.0%
TTGTGAATACATGAAGCTAG+AGG - tig0024333:60499-60518 None:intergenic 35.0%
CTCCCTAAATTGAAGATATG+GGG + tig0024333:60579-60598 Msa1416190:intron 35.0%
CAACCCCATATCTTCAATTT+AGG - tig0024333:60585-60604 None:intergenic 35.0%
!! TGTCGTTCTGAGAGATAATT+GGG - tig0024333:60651-60670 None:intergenic 35.0%
!! TTGTCGTTCTGAGAGATAAT+TGG - tig0024333:60652-60671 None:intergenic 35.0%
AATAACAAGTGGGATTGAGA+GGG - tig0024333:60683-60702 None:intergenic 35.0%
AAATAACAAGTGGGATTGAG+AGG - tig0024333:60684-60703 None:intergenic 35.0%
GAAAATTATTCCCAGCAATG+TGG + tig0024333:60877-60896 Msa1416190:intron 35.0%
CAATGTGGAGGTTCAAAATT+TGG + tig0024333:60892-60911 Msa1416190:intron 35.0%
TTCTAACTTCGTAACATACG+TGG - tig0024333:60922-60941 None:intergenic 35.0%
AGCCTTGGCAATAAAAACAT+TGG - tig0024333:60996-61015 None:intergenic 35.0%
!! AATGTTTTTATTGCCAAGGC+TGG + tig0024333:60995-61014 Msa1416190:intron 35.0%
GAATAAAAAGGTTCCCATGA+AGG + tig0024333:61023-61042 Msa1416190:intron 35.0%
ATAAGAGTTTCCACCTTCAT+GGG - tig0024333:61039-61058 None:intergenic 35.0%
TATAAGAGTTTCCACCTTCA+TGG - tig0024333:61040-61059 None:intergenic 35.0%
CCCCACTATTACAAATAAGT+TGG + tig0024333:61060-61079 Msa1416190:intron 35.0%
ACAAGATACTTGCAATCTGT+GGG + tig0024333:61115-61134 Msa1416190:intron 35.0%
TATGTTTGTCTGTATCACGA+AGG + tig0024333:61142-61161 Msa1416190:intron 35.0%
GTATGAAACATCCATTACGT+AGG + tig0024333:61295-61314 Msa1416190:intron 35.0%
TATATCCTTAATAATGCCCG+GGG + tig0024333:61441-61460 Msa1416190:intron 35.0%
CTAATTGGTTGCATGGATTT+GGG - tig0024333:61527-61546 None:intergenic 35.0%
!! CTTATTTCTATCACTGCCTT+GGG + tig0024333:61795-61814 Msa1416190:intron 35.0%
!! TTATTTCTATCACTGCCTTG+GGG + tig0024333:61796-61815 Msa1416190:intron 35.0%
CCAATGAATTATCCGAATGA+TGG - tig0024333:61959-61978 None:intergenic 35.0%
CCATCATTCGGATAATTCAT+TGG + tig0024333:61956-61975 Msa1416190:CDS 35.0%
!! TGAGCAAACAATTTTCTAGC+TGG - tig0024333:61987-62006 None:intergenic 35.0%
! CGTATGCTATCATTCACTTT+TGG + tig0024333:62088-62107 Msa1416190:intron 35.0%
! ATTTTCATCTCTATCTGCAC+AGG + tig0024333:62111-62130 Msa1416190:intron 35.0%
TTGCTTTGCATAGTAATGCT+CGG - tig0024333:62186-62205 None:intergenic 35.0%
ACACTCTTATTGCTTGAGAA+AGG + tig0024333:62257-62276 Msa1416190:intron 35.0%
ACAATTCAAACGGTGAAACA+TGG + tig0024333:62345-62364 Msa1416190:intron 35.0%
TTAGTGTGTTATGTTAGTGG+CGG + tig0024333:62492-62511 Msa1416190:intron 35.0%
CCATTTAACTGAGGGTTATA+AGG - tig0024333:62582-62601 None:intergenic 35.0%
CCTTATAACCCTCAGTTAAA+TGG + tig0024333:62579-62598 Msa1416190:intron 35.0%
CACATCAACCATTTAACTGA+GGG - tig0024333:62590-62609 None:intergenic 35.0%
TCACATCAACCATTTAACTG+AGG - tig0024333:62591-62610 None:intergenic 35.0%
TGAGCAAGTAATTGAATGAG+TGG + tig0024333:62742-62761 Msa1416190:intron 35.0%
AATGATTTCCAAGATCTGCT+TGG - tig0024333:62969-62988 None:intergenic 35.0%
GAAATCAAGATTTACGACGA+AGG + tig0024333:63222-63241 Msa1416190:CDS 35.0%
AATCAAGATTTACGACGAAG+GGG + tig0024333:63224-63243 Msa1416190:CDS 35.0%
TATTTAGACTAATTTGGGCC+TGG - tig0024333:63462-63481 None:intergenic 35.0%
ACTCGATATTCCTTGTCATT+GGG - tig0024333:63558-63577 None:intergenic 35.0%
GCATAAACCATTCTCTTATG+TGG + tig0024333:63578-63597 Msa1416190:intron 35.0%
!! TGCTCAAAGGCACATTTTAA+TGG - tig0024333:63655-63674 None:intergenic 35.0%
ATTAAAATGTGCCTTTGAGC+AGG + tig0024333:63654-63673 Msa1416190:intron 35.0%
TCACATACATAGTGAGAGAA+TGG - tig0024333:63711-63730 None:intergenic 35.0%
!! TTGTCGATTCTCTACTATGA+AGG + tig0024333:63738-63757 Msa1416190:intron 35.0%
TCTACTGTATACCCTAGTAA+TGG + tig0024333:63766-63785 Msa1416190:intron 35.0%
!! TTTTCCTTTCATTGCTGTTG+TGG - tig0024333:63964-63983 None:intergenic 35.0%
!! CATTTGCTATTGAGTTGGTT+AGG - tig0024333:64021-64040 None:intergenic 35.0%
! TCTAGAATAAACCTGCCATA+TGG + tig0024333:64161-64180 Msa1416190:intron 35.0%
TTCTAATTCGATTGAGGATC+CGG - tig0024333:64214-64233 None:intergenic 35.0%
GATCCTCAATCGAATTAGAA+GGG + tig0024333:64214-64233 Msa1416190:intron 35.0%
ACATCAAGTTACAGAACTCT+TGG - tig0024333:64240-64259 None:intergenic 35.0%
TTACCAATCTTCATGGTTGT+AGG - tig0024333:64327-64346 None:intergenic 35.0%
TCTACGACTAAACCGTAAAT+TGG - tig0024333:64661-64680 None:intergenic 35.0%
! GCTAAATATTGTAGGTTGAC+CGG + tig0024333:64956-64975 Msa1416190:intron 35.0%
TTGACCGGTATTTATGCTTT+AGG + tig0024333:64971-64990 Msa1416190:intron 35.0%
GTTACACAACAGATGTTGAA+GGG - tig0024333:65086-65105 None:intergenic 35.0%
TGTTACACAACAGATGTTGA+AGG - tig0024333:65087-65106 None:intergenic 35.0%
TAAGGATTCTCAATCATCTC+AGG - tig0024333:65248-65267 None:intergenic 35.0%
GAATTTATCGGAACTCATCA+TGG - tig0024333:65322-65341 None:intergenic 35.0%
CGATAAATTCATGTTAGGTG+AGG + tig0024333:65332-65351 Msa1416190:intron 35.0%
!! ATGGCAGAGTTTTGATGTTT+CGG + tig0024333:65493-65512 Msa1416190:three_prime_UTR 35.0%
TGAGACTAGCAACCTAATAA+GGG - tig0024333:65519-65538 None:intergenic 35.0%
! GTGTTACTCTTAGTTCTCAT+TGG + tig0024333:65726-65745 Msa1416190:three_prime_UTR 35.0%
AAGCAAAATGAGTGTGACTT+GGG - tig0024333:65830-65849 None:intergenic 35.0%
TAAGCAAAATGAGTGTGACT+TGG - tig0024333:65831-65850 None:intergenic 35.0%
CCGATGATCACAAATATACT+TGG - tig0024333:65953-65972 None:intergenic 35.0%
! TCTGGAAATGCAATGGGTTT+AGG + tig0024333:58665-58684 Msa1416190:exon 40.0%
TTCATGAAGTCTTCCCATTC+AGG - tig0024333:58956-58975 None:intergenic 40.0%
TCTTCAACAAGCTCATAGAG+AGG + tig0024333:59102-59121 Msa1416190:CDS 40.0%
TGAGTATGATCCTCCTAGTT+GGG + tig0024333:59192-59211 Msa1416190:CDS 40.0%
TTATAGTATGTGTCCGAGAG+TGG + tig0024333:59295-59314 Msa1416190:intron 40.0%
TATAGTATGTGTCCGAGAGT+GGG + tig0024333:59296-59315 Msa1416190:intron 40.0%
GGATGTGTGGTAAGATTAGA+CGG + tig0024333:59373-59392 Msa1416190:intron 40.0%
GATGTGTGGTAAGATTAGAC+GGG + tig0024333:59374-59393 Msa1416190:intron 40.0%
GAAACTAGGCTTATGTGGTT+TGG + tig0024333:59469-59488 Msa1416190:intron 40.0%
! AAAGCCTTATCCCACTAAGT+GGG - tig0024333:59695-59714 None:intergenic 40.0%
! TTGTTGTTGTCAGTGTGCTA+TGG + tig0024333:59719-59738 Msa1416190:intron 40.0%
!! CTTTTGGCTATGATATGGGT+TGG + tig0024333:59861-59880 Msa1416190:CDS 40.0%
ACAGCACAAAGCTTCAACAA+TGG + tig0024333:60091-60110 Msa1416190:CDS 40.0%
! TATTTGGCCTTCTACACACA+TGG + tig0024333:60435-60454 Msa1416190:intron 40.0%
TATGGGGTTGCAGAAATATG+AGG + tig0024333:60595-60614 Msa1416190:intron 40.0%
ATGGGGTTGCAGAAATATGA+GGG + tig0024333:60596-60615 Msa1416190:intron 40.0%
AATTTCTTTATGCCTGCCCT+AGG + tig0024333:60623-60642 Msa1416190:intron 40.0%
ATTTCTTTATGCCTGCCCTA+GGG + tig0024333:60624-60643 Msa1416190:intron 40.0%
!! GTCGTTCTGAGAGATAATTG+GGG - tig0024333:60650-60669 None:intergenic 40.0%
ATTTGGGAGTAGTTAGGATG+AGG - tig0024333:60715-60734 None:intergenic 40.0%
!! GTTGCTATTTGGGAGTAGTT+AGG - tig0024333:60721-60740 None:intergenic 40.0%
CAGCAACGTATCTGTGATTA+GGG - tig0024333:60805-60824 None:intergenic 40.0%
AATAAGCACCCAGTAGAGAA+GGG - tig0024333:60847-60866 None:intergenic 40.0%
AAATAAGCACCCAGTAGAGA+AGG - tig0024333:60848-60867 None:intergenic 40.0%
TCTACTGGGTGCTTATTTCA+TGG + tig0024333:60850-60869 Msa1416190:intron 40.0%
AATTATTCCCAGCAATGTGG+AGG + tig0024333:60880-60899 Msa1416190:intron 40.0%
! TTTTGAACCTCCACATTGCT+GGG - tig0024333:60890-60909 None:intergenic 40.0%
! ATTTTGAACCTCCACATTGC+TGG - tig0024333:60891-60910 None:intergenic 40.0%
! TTTTATTCCTAGTCCAGCCT+TGG - tig0024333:61011-61030 None:intergenic 40.0%
! AGGCTGGACTAGGAATAAAA+AGG + tig0024333:61011-61030 Msa1416190:intron 40.0%
TAAAAAGGTTCCCATGAAGG+TGG + tig0024333:61026-61045 Msa1416190:intron 40.0%
CACAAGATACTTGCAATCTG+TGG + tig0024333:61114-61133 Msa1416190:intron 40.0%
GACAATACAGTCGTATACCT+TGG + tig0024333:61164-61183 Msa1416190:intron 40.0%
TATACCTTGGTACCAAACAC+AGG + tig0024333:61177-61196 Msa1416190:intron 40.0%
CAAACACAGGCATCTAACTT+GGG + tig0024333:61190-61209 Msa1416190:intron 40.0%
ACTTGGGTATTTAGCGTATC+AGG + tig0024333:61206-61225 Msa1416190:intron 40.0%
CTTGGGTATTTAGCGTATCA+GGG + tig0024333:61207-61226 Msa1416190:intron 40.0%
TTGGGTATTTAGCGTATCAG+GGG + tig0024333:61208-61227 Msa1416190:intron 40.0%
AGTGAGATCAAAAATGACCC+CGG - tig0024333:61461-61480 None:intergenic 40.0%
!! TGTAACCTTTGCTCTGAAGA+CGG + tig0024333:61486-61505 Msa1416190:intron 40.0%
! TCTGAAGACGGGATATTTTG+CGG + tig0024333:61498-61517 Msa1416190:intron 40.0%
CCTAATTGGTTGCATGGATT+TGG - tig0024333:61528-61547 None:intergenic 40.0%
CCAAATCCATGCAACCAATT+AGG + tig0024333:61525-61544 Msa1416190:intron 40.0%
TGTTGGGCTATTCAAACTGA+CGG + tig0024333:61573-61592 Msa1416190:intron 40.0%
GGTTGTAAGTGATAGATCCA+TGG + tig0024333:61595-61614 Msa1416190:intron 40.0%
!! GCTTATTTCTATCACTGCCT+TGG + tig0024333:61794-61813 Msa1416190:intron 40.0%
AAAGAGACTCAGACAGAGAT+GGG + tig0024333:61856-61875 Msa1416190:CDS 40.0%
TTTCCATGGGCTCTTTGATT+TGG + tig0024333:61899-61918 Msa1416190:CDS 40.0%
TTACCAAATCAAAGAGCCCA+TGG - tig0024333:61905-61924 None:intergenic 40.0%
TCACAATGACTCCCATCATT+CGG + tig0024333:61944-61963 Msa1416190:CDS 40.0%
GGATGGAGTTTCCCAATTAT+AGG - tig0024333:62161-62180 None:intergenic 40.0%
TTTGCATAGTAATGCTCGGA+CGG - tig0024333:62182-62201 None:intergenic 40.0%
GTTGGAGAAAAGATGGTCAT+AGG - tig0024333:62526-62545 None:intergenic 40.0%
!! GATGAGTTGGTATAGAAGGA+GGG - tig0024333:62557-62576 None:intergenic 40.0%
!! AGATGAGTTGGTATAGAAGG+AGG - tig0024333:62558-62577 None:intergenic 40.0%
!! GGTAGATGAGTTGGTATAGA+AGG - tig0024333:62561-62580 None:intergenic 40.0%
GGGTTATAAGGTAGATGAGT+TGG - tig0024333:62570-62589 None:intergenic 40.0%
ATTGAATGAGTGGCTGTGTT+AGG + tig0024333:62752-62771 Msa1416190:intron 40.0%
! AGGACAGGTGGGTATTTTAT+TGG + tig0024333:62772-62791 Msa1416190:intron 40.0%
! CAGGTGGGTATTTTATTGGA+AGG + tig0024333:62776-62795 Msa1416190:intron 40.0%
ATGAATGGTAGGGAAAACCA+GGG + tig0024333:62879-62898 Msa1416190:intron 40.0%
TAAGGAATAGGGGTTATGAC+AGG + tig0024333:62990-63009 Msa1416190:intron 40.0%
AAGGAATAGGGGTTATGACA+GGG + tig0024333:62991-63010 Msa1416190:intron 40.0%
TTGGGACCAAATTGTTGGAA+TGG + tig0024333:63068-63087 Msa1416190:CDS 40.0%
CAATTCAAGACATGACCAAG+TGG + tig0024333:63167-63186 Msa1416190:intron 40.0%
! AATGTGGATTATGTGGAGTC+TGG + tig0024333:63276-63295 Msa1416190:CDS 40.0%
TTGCTAGCAAGATGTACCTT+TGG - tig0024333:63386-63405 None:intergenic 40.0%
! CTTTCTTCTTTTCCTAAGCC+AGG - tig0024333:63414-63433 None:intergenic 40.0%
GGCTTAGGAAAAGAAGAAAG+AGG + tig0024333:63414-63433 Msa1416190:intron 40.0%
TAATTCTGACCTATTTGGCC+AGG + tig0024333:63441-63460 Msa1416190:intron 40.0%
TTCACGGAGGTGATGTAAAT+TGG + tig0024333:63488-63507 Msa1416190:intron 40.0%
TGAAGTAAAGCCCAATGACA+AGG + tig0024333:63545-63564 Msa1416190:intron 40.0%
CACTCGATATTCCTTGTCAT+TGG - tig0024333:63559-63578 None:intergenic 40.0%
AGAGAATGGAGAGTCAGAAA+GGG - tig0024333:63697-63716 None:intergenic 40.0%
ATCGACACTGTCCATTACTA+GGG - tig0024333:63780-63799 None:intergenic 40.0%
TAGTAAGTGTGATCGACACT+GGG - tig0024333:63791-63810 None:intergenic 40.0%
ATAGTAAGTGTGATCGACAC+TGG - tig0024333:63792-63811 None:intergenic 40.0%
ACAGCAATGAAAGGAAAACC+AGG + tig0024333:63966-63985 Msa1416190:intron 40.0%
CAGCAATGAAAGGAAAACCA+GGG + tig0024333:63967-63986 Msa1416190:intron 40.0%
TAGGAGAGAATATCTCTCGT+AGG - tig0024333:64002-64021 None:intergenic 40.0%
GGAATTATAAGGTGGGTAGT+AGG - tig0024333:64067-64086 None:intergenic 40.0%
CAAGTGATTCTGGTAGAGAA+TGG - tig0024333:64088-64107 None:intergenic 40.0%
CATTCTCTACCAGAATCACT+TGG + tig0024333:64086-64105 Msa1416190:intron 40.0%
TGACGTATTCCAAGTGATTC+TGG - tig0024333:64098-64117 None:intergenic 40.0%
GGATCCTCAATCGAATTAGA+AGG + tig0024333:64213-64232 Msa1416190:intron 40.0%
CTTCCTACAACCATGAAGAT+TGG + tig0024333:64321-64340 Msa1416190:intron 40.0%
GCTGGTATTACCAATCTTCA+TGG - tig0024333:64334-64353 None:intergenic 40.0%
GAAGAGATCAAAGGGAAAGT+AGG - tig0024333:64471-64490 None:intergenic 40.0%
GCACACTGCACATATGTTTA+TGG + tig0024333:64686-64705 Msa1416190:intron 40.0%
AAACAATTTCTCTAGGCAGC+CGG - tig0024333:64792-64811 None:intergenic 40.0%
!! GATATACTGGTTCATGAGAG+AGG + tig0024333:64822-64841 Msa1416190:intron 40.0%
GAGAGAGGAAGTAAATACTC+TGG + tig0024333:64837-64856 Msa1416190:intron 40.0%
AGAGGAAGTAAATACTCTGG+TGG + tig0024333:64840-64859 Msa1416190:intron 40.0%
GAGGAAGTAAATACTCTGGT+GGG + tig0024333:64841-64860 Msa1416190:intron 40.0%
! ACCGGTATTTATGCTTTAGG+AGG + tig0024333:64974-64993 Msa1416190:intron 40.0%
CCCTCCTAAAGCATAAATAC+CGG - tig0024333:64978-64997 None:intergenic 40.0%
!! CCGGTATTTATGCTTTAGGA+GGG + tig0024333:64975-64994 Msa1416190:intron 40.0%
AGGCAGACGTTGACAAAAAT+GGG + tig0024333:65210-65229 Msa1416190:intron 40.0%
GACAAGGAGTCTGAATTTGA+AGG + tig0024333:65463-65482 Msa1416190:three_prime_UTR 40.0%
TTGATGTTTCGGCCCTTATT+AGG + tig0024333:65504-65523 Msa1416190:three_prime_UTR 40.0%
CTGAGACTAGCAACCTAATA+AGG - tig0024333:65520-65539 None:intergenic 40.0%
TTTGCTGATAGGATCCATCA+TGG + tig0024333:65596-65615 Msa1416190:three_prime_UTR 40.0%
TAGGAACGTGATGGTCAAAT+TGG - tig0024333:65781-65800 None:intergenic 40.0%
TAATCCATCTAGGAACGTGA+TGG - tig0024333:65790-65809 None:intergenic 40.0%
ATTTGTGATCATCGGATTGC+AGG + tig0024333:65958-65977 Msa1416190:three_prime_UTR 40.0%
! TGAGCTTAGCTCAGTTGGTA+GGG - tig0024333:58462-58481 None:intergenic 45.0%
GAAGAGTGGTGGTTGTTGAA+GGG - tig0024333:58752-58771 None:intergenic 45.0%
TGAAGTTGGAACGGAGTTTG+AGG - tig0024333:58790-58809 None:intergenic 45.0%
GTTCGAGAGTGAAGTTGGAA+CGG - tig0024333:58799-58818 None:intergenic 45.0%
AGAAGGTTCGAGAGTGAAGT+TGG - tig0024333:58804-58823 None:intergenic 45.0%
TTGGTGAGAAGAATGGGAAC+GGG - tig0024333:58831-58850 None:intergenic 45.0%
! GTTGGTGAGAAGAATGGGAA+CGG - tig0024333:58832-58851 None:intergenic 45.0%
!! GACAGGTTGGTGAGAAGAAT+GGG - tig0024333:58837-58856 None:intergenic 45.0%
GTTCCCATTGTTTGTCTTCG+CGG - tig0024333:58895-58914 None:intergenic 45.0%
TCACGAATCCCAACCTGAAT+GGG + tig0024333:58940-58959 Msa1416190:CDS 45.0%
! GAAGTCTTCCCATTCAGGTT+GGG - tig0024333:58951-58970 None:intergenic 45.0%
TGAAGTCTTCCCATTCAGGT+TGG - tig0024333:58952-58971 None:intergenic 45.0%
!!! GCAGGATCCACATCGATTTT+GGG - tig0024333:59043-59062 None:intergenic 45.0%
!!! AGCAGGATCCACATCGATTT+TGG - tig0024333:59044-59063 None:intergenic 45.0%
CTGAGTATGATCCTCCTAGT+TGG + tig0024333:59191-59210 Msa1416190:CDS 45.0%
GCAGATTTAACCCAACTAGG+AGG - tig0024333:59205-59224 None:intergenic 45.0%
CCAGCAGATTTAACCCAACT+AGG - tig0024333:59208-59227 None:intergenic 45.0%
CCTAGTTGGGTTAAATCTGC+TGG + tig0024333:59205-59224 Msa1416190:CDS 45.0%
GTTGAATCTTCACCCACTCT+CGG - tig0024333:59311-59330 None:intergenic 45.0%
TGGTGGAAACTAGGCTTATG+TGG + tig0024333:59464-59483 Msa1416190:intron 45.0%
GAGGATAGTCAGATCACTAG+AGG + tig0024333:59549-59568 Msa1416190:intron 45.0%
! ACTAAGTGGGTTCAGCTACA+TGG - tig0024333:59682-59701 None:intergenic 45.0%
ATGTAGCTGAACCCACTTAG+TGG + tig0024333:59681-59700 Msa1416190:intron 45.0%
TGTAGCTGAACCCACTTAGT+GGG + tig0024333:59682-59701 Msa1416190:intron 45.0%
TGAACCCACTTAGTGGGATA+AGG + tig0024333:59688-59707 Msa1416190:intron 45.0%
! CAAAGCCTTATCCCACTAAG+TGG - tig0024333:59696-59715 None:intergenic 45.0%
!! TTGGCTATGATATGGGTTGG+TGG + tig0024333:59864-59883 Msa1416190:CDS 45.0%
GCATCTGATGCAGATGGAAA+TGG + tig0024333:59905-59924 Msa1416190:CDS 45.0%
! TTGTGCTGTTGCTATCAGCT+GGG - tig0024333:60080-60099 None:intergenic 45.0%
! TTTGTGCTGTTGCTATCAGC+TGG - tig0024333:60081-60100 None:intergenic 45.0%
AGCTTCAACAATGGTTGTGC+AGG + tig0024333:60100-60119 Msa1416190:CDS 45.0%
GCTTCAACAATGGTTGTGCA+GGG + tig0024333:60101-60120 Msa1416190:CDS 45.0%
AGGGGACTACAAACATGTTG+GGG - tig0024333:60224-60243 None:intergenic 45.0%
CAGGGGACTACAAACATGTT+GGG - tig0024333:60225-60244 None:intergenic 45.0%
ACAGGGGACTACAAACATGT+TGG - tig0024333:60226-60245 None:intergenic 45.0%
TCATCAGCCATGTGTGTAGA+AGG - tig0024333:60445-60464 None:intergenic 45.0%
GCAGCAACGTATCTGTGATT+AGG - tig0024333:60806-60825 None:intergenic 45.0%
! ACGTTGCTGCGAAACTTTTG+AGG + tig0024333:60816-60835 Msa1416190:intron 45.0%
! CGTTGCTGCGAAACTTTTGA+GGG + tig0024333:60817-60836 Msa1416190:intron 45.0%
TTTATTGCCAAGGCTGGACT+AGG + tig0024333:61001-61020 Msa1416190:intron 45.0%
CCAAGTTAGATGCCTGTGTT+TGG - tig0024333:61192-61211 None:intergenic 45.0%
CCAAACACAGGCATCTAACT+TGG + tig0024333:61189-61208 Msa1416190:intron 45.0%
AACATCCATTACGTAGGTGC+TGG + tig0024333:61301-61320 Msa1416190:intron 45.0%
CTTTACCAGCACCTACGTAA+TGG - tig0024333:61309-61328 None:intergenic 45.0%
!! TACGTAGGTGCTGGTAAAGA+TGG + tig0024333:61310-61329 Msa1416190:intron 45.0%
!! ACGTAGGTGCTGGTAAAGAT+GGG + tig0024333:61311-61330 Msa1416190:intron 45.0%
AATGACCCCGGGCATTATTA+AGG - tig0024333:61449-61468 None:intergenic 45.0%
GTGAGATCAAAAATGACCCC+GGG - tig0024333:61460-61479 None:intergenic 45.0%
!! GTAACCTTTGCTCTGAAGAC+GGG + tig0024333:61487-61506 Msa1416190:intron 45.0%
ATATCCCGTCTTCAGAGCAA+AGG - tig0024333:61494-61513 None:intergenic 45.0%
GTTGGGCTATTCAAACTGAC+GGG + tig0024333:61574-61593 Msa1416190:intron 45.0%
! AAACTAGGACACTGACTGCA+AGG - tig0024333:61638-61657 None:intergenic 45.0%
TGCAGTCAGTGTCCTAGTTT+AGG + tig0024333:61638-61657 Msa1416190:intron 45.0%
GAAAGAGACTCAGACAGAGA+TGG + tig0024333:61855-61874 Msa1416190:CDS 45.0%
TTTGCTCAGCTTGACCAAGA+TGG + tig0024333:61999-62018 Msa1416190:CDS 45.0%
GAAAATACCCGTCACCATCT+TGG - tig0024333:62016-62035 None:intergenic 45.0%
CATGAGGGTTGGAGAAAAGA+TGG - tig0024333:62533-62552 None:intergenic 45.0%
GTATAGAAGGAGGGACATGA+GGG - tig0024333:62548-62567 None:intergenic 45.0%
TGCTCAAAAAGGGACTTGCA+GGG - tig0024333:62728-62747 None:intergenic 45.0%
TTGCTCAAAAAGGGACTTGC+AGG - tig0024333:62729-62748 None:intergenic 45.0%
GATGAATGGTAGGGAAAACC+AGG + tig0024333:62878-62897 Msa1416190:intron 45.0%
AGGATTAGGGAACACCGTAT+TGG + tig0024333:62922-62941 Msa1416190:intron 45.0%
GGATTAGGGAACACCGTATT+GGG + tig0024333:62923-62942 Msa1416190:intron 45.0%
GATTAGGGAACACCGTATTG+GGG + tig0024333:62924-62943 Msa1416190:intron 45.0%
ATTAGGGAACACCGTATTGG+GGG + tig0024333:62925-62944 Msa1416190:intron 45.0%
AAGATCTGCTTGGTCGAATG+GGG - tig0024333:62959-62978 None:intergenic 45.0%
CAAGATCTGCTTGGTCGAAT+GGG - tig0024333:62960-62979 None:intergenic 45.0%
AGGAATAGGGGTTATGACAG+GGG + tig0024333:62992-63011 Msa1416190:intron 45.0%
CACCTTTCTTTCCCAAGAAC+AGG - tig0024333:63023-63042 None:intergenic 45.0%
CTGTTCTTGGGAAAGAAAGG+TGG + tig0024333:63021-63040 Msa1416190:CDS 45.0%
TGGATCTATCTGCCTGTGTT+GGG + tig0024333:63041-63060 Msa1416190:CDS 45.0%
GAGTCTTGGGACCAAATTGT+TGG + tig0024333:63063-63082 Msa1416190:CDS 45.0%
GTTGGAATGGTTTACTTGGG+CGG + tig0024333:63081-63100 Msa1416190:CDS 45.0%
CCTCAAACATCTCTACCACT+TGG - tig0024333:63185-63204 None:intergenic 45.0%
CCAAGTGGTAGAGATGTTTG+AGG + tig0024333:63182-63201 Msa1416190:intron 45.0%
! GTAGAGATGTTTGAGGCTGA+GGG + tig0024333:63189-63208 Msa1416190:intron 45.0%
GCGGAGACATCCAAAAAATG+TGG + tig0024333:63260-63279 Msa1416190:CDS 45.0%
CATGAATTCGGCAACTCCAT+CGG - tig0024333:63321-63340 None:intergenic 45.0%
TTGCCGAATTCATGCTCACA+TGG + tig0024333:63327-63346 Msa1416190:CDS 45.0%
TGCCGAATTCATGCTCACAT+GGG + tig0024333:63328-63347 Msa1416190:CDS 45.0%
ACCCCATGTGAGCATGAATT+CGG - tig0024333:63333-63352 None:intergenic 45.0%
AATTCATGCTCACATGGGGT+GGG + tig0024333:63333-63352 Msa1416190:CDS 45.0%
ATCTTGCTAGCAAGATGACC+TGG + tig0024333:63393-63412 Msa1416190:intron 45.0%
TAATTTGGGCCTGGCCAAAT+AGG - tig0024333:63453-63472 None:intergenic 45.0%
ATGTGCCCCACATAAGAGAA+TGG - tig0024333:63588-63607 None:intergenic 45.0%
ATGTGGGGCACATATCAGAA+TGG + tig0024333:63595-63614 Msa1416190:intron 45.0%
TGTGGGGCACATATCAGAAT+GGG + tig0024333:63596-63615 Msa1416190:intron 45.0%
AAAATGTGCCTTTGAGCAGG+TGG + tig0024333:63657-63676 Msa1416190:intron 45.0%
AACTGTAACCACCTGCTCAA+AGG - tig0024333:63668-63687 None:intergenic 45.0%
GAGAGAATGGAGAGTCAGAA+AGG - tig0024333:63698-63717 None:intergenic 45.0%
GATCGACACTGTCCATTACT+AGG - tig0024333:63781-63800 None:intergenic 45.0%
TCGATCACACTTACTATGCC+AGG + tig0024333:63819-63838 Msa1416190:intron 45.0%
CGATCACACTTACTATGCCA+GGG + tig0024333:63820-63839 Msa1416190:intron 45.0%
TTGTCTCAAGGTGAAAACCC+TGG - tig0024333:63840-63859 None:intergenic 45.0%
AGCTCCACAACAGCAATGAA+AGG + tig0024333:63957-63976 Msa1416190:intron 45.0%
ATATCTCTCGTAGGAGCCTT+AGG - tig0024333:63993-64012 None:intergenic 45.0%
AGAAAGAGAGCTGAGTCAAC+AGG - tig0024333:64141-64160 None:intergenic 45.0%
TGGCCCTTCTAATTCGATTG+AGG - tig0024333:64220-64239 None:intergenic 45.0%
GCTAGATTCATCTCCATTCC+CGG + tig0024333:64770-64789 Msa1416190:intron 45.0%
AACAATTTCTCTAGGCAGCC+GGG - tig0024333:64791-64810 None:intergenic 45.0%
AAATACTCTGGTGGGAAAGC+TGG + tig0024333:64849-64868 Msa1416190:intron 45.0%
AATACTCTGGTGGGAAAGCT+GGG + tig0024333:64850-64869 Msa1416190:intron 45.0%
CAGGCAGACGTTGACAAAAA+TGG + tig0024333:65209-65228 Msa1416190:intron 45.0%
CAATCATCTCAGGCAAAGTG+AGG - tig0024333:65238-65257 None:intergenic 45.0%
! TAGGTTGCTAGTCTCAGTCA+TGG + tig0024333:65523-65542 Msa1416190:three_prime_UTR 45.0%
! TTGCTAGTCTCAGTCATGGT+GGG + tig0024333:65527-65546 Msa1416190:three_prime_UTR 45.0%
!!! TCAGTCATGGTGGGGTTTTT+TGG + tig0024333:65536-65555 Msa1416190:three_prime_UTR 45.0%
!!! CAGTCATGGTGGGGTTTTTT+GGG + tig0024333:65537-65556 Msa1416190:three_prime_UTR 45.0%
!!! AGTCATGGTGGGGTTTTTTG+GGG + tig0024333:65538-65557 Msa1416190:three_prime_UTR 45.0%
!!! GTTTTTTGGGGTGGCAACAT+TGG + tig0024333:65550-65569 Msa1416190:three_prime_UTR 45.0%
TATTACCCTCCAGATGATCC+AGG - tig0024333:65629-65648 None:intergenic 45.0%
TGGATCATCTGGAGGGTAAT+AGG + tig0024333:65628-65647 Msa1416190:three_prime_UTR 45.0%
TTGACCATCACGTTCCTAGA+TGG + tig0024333:65783-65802 Msa1416190:three_prime_UTR 45.0%
!! TTATAAAAAAAAAAATATCT+GGG - tig0024333:65879-65898 None:intergenic 5.0%
AAGGTATGGGGTTCGAATCC+CGG - tig0024333:58415-58434 None:intergenic 50.0%
GTGAGCTTAGCTCAGTTGGT+AGG - tig0024333:58463-58482 None:intergenic 50.0%
TCTCGTGAGCTTAGCTCAGT+TGG - tig0024333:58467-58486 None:intergenic 50.0%
AACTGAGCTAAGCTCACGAG+AGG + tig0024333:58466-58485 Msa1416190:intron 50.0%
! TGAAGGGAGAGTGTGAAGAG+AGG - tig0024333:58736-58755 None:intergenic 50.0%
GGAAGAGTGGTGGTTGTTGA+AGG - tig0024333:58753-58772 None:intergenic 50.0%
AGTTGGAACGGAGTTTGAGG+CGG - tig0024333:58787-58806 None:intergenic 50.0%
GAATGGGAACGGGAATGAGA+AGG - tig0024333:58821-58840 None:intergenic 50.0%
!! GGACAGGTTGGTGAGAAGAA+TGG - tig0024333:58838-58857 None:intergenic 50.0%
CCACCGCGAAGACAAACAAT+GGG + tig0024333:58889-58908 Msa1416190:CDS 50.0%
!! TTCAGGTTGGGATTCGTGAG+CGG - tig0024333:58939-58958 None:intergenic 50.0%
CTCACGAATCCCAACCTGAA+TGG + tig0024333:58939-58958 Msa1416190:CDS 50.0%
TCAACAATGGTTGTGCAGGG+AGG + tig0024333:60104-60123 Msa1416190:CDS 50.0%
GAGAGATAATTGGGGCCCTA+GGG - tig0024333:60642-60661 None:intergenic 50.0%
TGAGAGATAATTGGGGCCCT+AGG - tig0024333:60643-60662 None:intergenic 50.0%
AGGGTTTGCCCTTCTCTACT+GGG + tig0024333:60836-60855 Msa1416190:intron 50.0%
GATGCCTGTGTTTGGTACCA+AGG - tig0024333:61184-61203 None:intergenic 50.0%
!! CGTAGGTGCTGGTAAAGATG+GGG + tig0024333:61312-61331 Msa1416190:intron 50.0%
!! GTAGGTGCTGGTAAAGATGG+GGG + tig0024333:61313-61332 Msa1416190:intron 50.0%
AGACTCAGACAGAGATGGGA+AGG + tig0024333:61860-61879 Msa1416190:CDS 50.0%
CAGCTTGACCAAGATGGTGA+CGG + tig0024333:62005-62024 Msa1416190:CDS 50.0%
AGCTTGACCAAGATGGTGAC+GGG + tig0024333:62006-62025 Msa1416190:CDS 50.0%
CATAGTAATGCTCGGACGGA+TGG - tig0024333:62178-62197 None:intergenic 50.0%
GGTATAGAAGGAGGGACATG+AGG - tig0024333:62549-62568 None:intergenic 50.0%
ATGAGTGGCTGTGTTAGGAC+AGG + tig0024333:62757-62776 Msa1416190:intron 50.0%
CCAAGATCTGCTTGGTCGAA+TGG - tig0024333:62961-62980 None:intergenic 50.0%
CCATTCGACCAAGCAGATCT+TGG + tig0024333:62958-62977 Msa1416190:intron 50.0%
GGCCTGTTCTTGGGAAAGAA+AGG + tig0024333:63018-63037 Msa1416190:CDS 50.0%
GTGGATCTATCTGCCTGTGT+TGG + tig0024333:63040-63059 Msa1416190:CDS 50.0%
ACTTGGGCGGAAAAACTCTG+AGG + tig0024333:63094-63113 Msa1416190:CDS 50.0%
! GGTAGAGATGTTTGAGGCTG+AGG + tig0024333:63188-63207 Msa1416190:intron 50.0%
TGAGGCTGAGGGAATTGTAG+TGG + tig0024333:63200-63219 Msa1416190:intron 50.0%
! AACTCCATCGGTTGCGTTGT+GGG - tig0024333:63309-63328 None:intergenic 50.0%
GCCGAATTCATGCTCACATG+GGG + tig0024333:63329-63348 Msa1416190:CDS 50.0%
GAATTCATGCTCACATGGGG+TGG + tig0024333:63332-63351 Msa1416190:CDS 50.0%
CTAGCAAGATGACCTGGCTT+AGG + tig0024333:63399-63418 Msa1416190:intron 50.0%
GAAAGGAAAACCAGGGCCTA+AGG + tig0024333:63974-63993 Msa1416190:intron 50.0%
GGTAGTAGGATGAAGTGGTG+GGG - tig0024333:64053-64072 None:intergenic 50.0%
GGGTAGTAGGATGAAGTGGT+GGG - tig0024333:64054-64073 None:intergenic 50.0%
TGGGTAGTAGGATGAAGTGG+TGG - tig0024333:64055-64074 None:intergenic 50.0%
AGGTGGGTAGTAGGATGAAG+TGG - tig0024333:64058-64077 None:intergenic 50.0%
TCGATTGAGGATCCGGTAGA+GGG - tig0024333:64207-64226 None:intergenic 50.0%
TTCGATTGAGGATCCGGTAG+AGG - tig0024333:64208-64227 None:intergenic 50.0%
! AGATGTTGAAGGGCATGCTG+AGG - tig0024333:65076-65095 None:intergenic 50.0%
! GTTGCTAGTCTCAGTCATGG+TGG + tig0024333:65526-65545 Msa1416190:three_prime_UTR 50.0%
! TGCTAGTCTCAGTCATGGTG+GGG + tig0024333:65528-65547 Msa1416190:three_prime_UTR 50.0%
ATCCATCATGGAGTTGCACC+TGG + tig0024333:65608-65627 Msa1416190:three_prime_UTR 50.0%
ATCCAGGTGCAACTCCATGA+TGG - tig0024333:65613-65632 None:intergenic 50.0%
TTGCACCTGGATCATCTGGA+GGG + tig0024333:65621-65640 Msa1416190:three_prime_UTR 50.0%
GCCACCGCGAAGACAAACAA+TGG + tig0024333:58888-58907 Msa1416190:CDS 55.0%
CCCATTGTTTGTCTTCGCGG+TGG - tig0024333:58892-58911 None:intergenic 55.0%
!! TCAGGTTGGGATTCGTGAGC+GGG - tig0024333:58938-58957 None:intergenic 55.0%
GGTTGTGCAGGGAGGAAATC+AGG + tig0024333:60112-60131 Msa1416190:CDS 55.0%
GTGCAGGGAGGAAATCAGGT+TGG + tig0024333:60116-60135 Msa1416190:intron 55.0%
GAGGGTTTGCCCTTCTCTAC+TGG + tig0024333:60835-60854 Msa1416190:intron 55.0%
GCATGAGCATGAGAACCCCA+AGG - tig0024333:61814-61833 None:intergenic 55.0%
AGAAGGAGGGACATGAGGGT+TGG - tig0024333:62544-62563 None:intergenic 55.0%
AGTGGCTGTGTTAGGACAGG+TGG + tig0024333:62760-62779 Msa1416190:intron 55.0%
GTGGCTGTGTTAGGACAGGT+GGG + tig0024333:62761-62780 Msa1416190:intron 55.0%
GGGTTAAGCCTCCCCCAATA+CGG - tig0024333:62939-62958 None:intergenic 55.0%
TAGGGGTTATGACAGGGGAG+AGG + tig0024333:62997-63016 Msa1416190:intron 55.0%
TCTGCCTGTGTTGGGAGTCT+TGG + tig0024333:63049-63068 Msa1416190:CDS 55.0%
CTGCCTGTGTTGGGAGTCTT+GGG + tig0024333:63050-63069 Msa1416190:CDS 55.0%
AAGGGGAGCAGTGCTTCATG+CGG + tig0024333:63241-63260 Msa1416190:CDS 55.0%
! ACTCCATCGGTTGCGTTGTG+GGG - tig0024333:63308-63327 None:intergenic 55.0%
! CAACTCCATCGGTTGCGTTG+TGG - tig0024333:63310-63329 None:intergenic 55.0%
TAGAGGGAATGACCCAAGCG+AGG - tig0024333:64191-64210 None:intergenic 55.0%
GCTTGGGTCATTCCCTCTAC+CGG + tig0024333:64192-64211 Msa1416190:intron 55.0%
TTTCTCTAGGCAGCCGGGAA+TGG - tig0024333:64786-64805 None:intergenic 55.0%
!!! CATGGTGGGGTTTTTTGGGG+TGG + tig0024333:65541-65560 Msa1416190:three_prime_UTR 55.0%
GGAGTTGCACCTGGATCATC+TGG + tig0024333:65617-65636 Msa1416190:three_prime_UTR 55.0%
GTTGCACCTGGATCATCTGG+AGG + tig0024333:65620-65639 Msa1416190:three_prime_UTR 55.0%
! TGGAACGGAGTTTGAGGCGG+CGG - tig0024333:58784-58803 None:intergenic 60.0%
! GTTCGAGTTCGGCGACGAGA+GGG - tig0024333:58868-58887 None:intergenic 60.0%
! TTCGCGGTGGCGTTCGAGTT+CGG - tig0024333:58879-58898 None:intergenic 60.0%
GATAATTGGGGCCCTAGGGC+AGG - tig0024333:60638-60657 None:intergenic 60.0%
AGGGAACACCGTATTGGGGG+AGG + tig0024333:62928-62947 Msa1416190:intron 60.0%
ACAGGGGAGAGGCCTGTTCT+TGG + tig0024333:63008-63027 Msa1416190:intron 60.0%
CAGGGGAGAGGCCTGTTCTT+GGG + tig0024333:63009-63028 Msa1416190:intron 60.0%
GGTCCCAAGACTCCCAACAC+AGG - tig0024333:63056-63075 None:intergenic 60.0%
! CTCCATCGGTTGCGTTGTGG+GGG - tig0024333:63307-63326 None:intergenic 60.0%
TGCTCACATGGGGTGGGCAA+TGG + tig0024333:63339-63358 Msa1416190:CDS 60.0%
GCTCACATGGGGTGGGCAAT+GGG + tig0024333:63340-63359 Msa1416190:CDS 60.0%
CCATATGGCGAGCCTCGCTT+GGG + tig0024333:64176-64195 Msa1416190:intron 60.0%
GGCATGCTGAGGCCATAGTC+AGG - tig0024333:65065-65084 None:intergenic 60.0%
! GGTGACGGTGGGAAGAGTGG+TGG - tig0024333:58763-58782 None:intergenic 65.0%
! TTTGAGGCGGCGGTGACGGT+GGG - tig0024333:58774-58793 None:intergenic 65.0%
! GGAGTTTGAGGCGGCGGTGA+CGG - tig0024333:58778-58797 None:intergenic 65.0%
GAGGGTCGAAGGGGACAGGT+TGG - tig0024333:58850-58869 None:intergenic 65.0%
ACGAGAGGGTCGAAGGGGAC+AGG - tig0024333:58854-58873 None:intergenic 65.0%
TCGGCGACGAGAGGGTCGAA+GGG - tig0024333:58860-58879 None:intergenic 65.0%
TTCGGCGACGAGAGGGTCGA+AGG - tig0024333:58861-58880 None:intergenic 65.0%
! CGTTCGAGTTCGGCGACGAG+AGG - tig0024333:58869-58888 None:intergenic 65.0%
! ATTCGTGAGCGGGAGCGTGC+TGG - tig0024333:58928-58947 None:intergenic 65.0%
TGCCCCCACAACGCAACCGA+TGG + tig0024333:63302-63321 Msa1416190:CDS 65.0%
CTCGTAGGAGCCTTAGGCCC+TGG - tig0024333:63987-64006 None:intergenic 65.0%
AGCGAGGCTCGCCATATGGC+AGG - tig0024333:64175-64194 None:intergenic 65.0%
GCCATATGGCGAGCCTCGCT+TGG + tig0024333:64175-64194 Msa1416190:intron 65.0%
CCCAAGCGAGGCTCGCCATA+TGG - tig0024333:64179-64198 None:intergenic 65.0%
! GGCGGTGACGGTGGGAAGAG+TGG - tig0024333:58766-58785 None:intergenic 70.0%
! GTTTGAGGCGGCGGTGACGG+TGG - tig0024333:58775-58794 None:intergenic 70.0%
CGGCGACGAGAGGGTCGAAG+GGG - tig0024333:58859-58878 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
tig0024333 gene 58373 65989 58373 ID=Msa1416190;Name=Msa1416190
tig0024333 mRNA 58373 65989 58373 ID=Msa1416190-mRNA-1;Parent=Msa1416190;Name=Msa1416190-mRNA-1;_AED=0.11;_eAED=0.11;_QI=178|0.66|0.8|0.8|0.77|0.7|10|558|462
tig0024333 exon 58373 58407 58373 ID=Msa1416190-mRNA-1:exon:22792;Parent=Msa1416190-mRNA-1
tig0024333 exon 58534 59226 58534 ID=Msa1416190-mRNA-1:exon:22793;Parent=Msa1416190-mRNA-1
tig0024333 exon 59852 59954 59852 ID=Msa1416190-mRNA-1:exon:22794;Parent=Msa1416190-mRNA-1
tig0024333 exon 60068 60133 60068 ID=Msa1416190-mRNA-1:exon:22795;Parent=Msa1416190-mRNA-1
tig0024333 exon 61854 62027 61854 ID=Msa1416190-mRNA-1:exon:22796;Parent=Msa1416190-mRNA-1
tig0024333 exon 62133 62229 62133 ID=Msa1416190-mRNA-1:exon:22797;Parent=Msa1416190-mRNA-1
tig0024333 exon 63012 63115 63012 ID=Msa1416190-mRNA-1:exon:22798;Parent=Msa1416190-mRNA-1
tig0024333 exon 63220 63388 63220 ID=Msa1416190-mRNA-1:exon:22799;Parent=Msa1416190-mRNA-1
tig0024333 exon 65212 65348 65212 ID=Msa1416190-mRNA-1:exon:22800;Parent=Msa1416190-mRNA-1
tig0024333 exon 65443 65989 65443 ID=Msa1416190-mRNA-1:exon:22801;Parent=Msa1416190-mRNA-1
tig0024333 five_prime_UTR 58373 58407 58373 ID=Msa1416190-mRNA-1:five_prime_utr;Parent=Msa1416190-mRNA-1
tig0024333 five_prime_UTR 58534 58676 58534 ID=Msa1416190-mRNA-1:five_prime_utr;Parent=Msa1416190-mRNA-1
tig0024333 CDS 58677 59226 58677 ID=Msa1416190-mRNA-1:cds;Parent=Msa1416190-mRNA-1
tig0024333 CDS 59852 59954 59852 ID=Msa1416190-mRNA-1:cds;Parent=Msa1416190-mRNA-1
tig0024333 CDS 60068 60133 60068 ID=Msa1416190-mRNA-1:cds;Parent=Msa1416190-mRNA-1
tig0024333 CDS 61854 62027 61854 ID=Msa1416190-mRNA-1:cds;Parent=Msa1416190-mRNA-1
tig0024333 CDS 62133 62229 62133 ID=Msa1416190-mRNA-1:cds;Parent=Msa1416190-mRNA-1
tig0024333 CDS 63012 63115 63012 ID=Msa1416190-mRNA-1:cds;Parent=Msa1416190-mRNA-1
tig0024333 CDS 63220 63388 63220 ID=Msa1416190-mRNA-1:cds;Parent=Msa1416190-mRNA-1
tig0024333 CDS 65212 65337 65212 ID=Msa1416190-mRNA-1:cds;Parent=Msa1416190-mRNA-1
tig0024333 three_prime_UTR 65338 65348 65338 ID=Msa1416190-mRNA-1:three_prime_utr;Parent=Msa1416190-mRNA-1
tig0024333 three_prime_UTR 65443 65989 65443 ID=Msa1416190-mRNA-1:three_prime_utr;Parent=Msa1416190-mRNA-1
Gene Sequence

>Msa1416190

ATGGGTTTAGGATCGGTATTGATATACACGATCTTAGCCCTAATTGTTCTCTTTTTCCTCTCTTCACACTCTCCCTTCAACAACCACCACTCTTCCCACCGTCACCGCCGCCTCAAACTCCGTTCCAACTTCACTCTCGAACCTTCTCATTCCCGTTCCCATTCTTCTCACCAACCTGTCCCCTTCGACCCTCTCGTCGCCGAACTCGAACGCCACCGCGAAGACAAACAATGGGAACAACAACACATCCAGCACGCTCCCGCTCACGAATCCCAACCTGAATGGGAAGACTTCATGAACGCTGAAGACTTCATCAATGATGAAGATAAGTTCAATGTTACATCTAGACTTCTTCTTCTTTTTCCCAAAATCGATGTGGATCCTGCTGATGATTTTGTTGATCTTCATGAGTTGACTATGTGGAATCTTCAACAAGCTCATAGAGAGGTTCTTCATCGTTCTCAAAGAGAAATGGAACTTCATGATAAGAATCATGATGGTTTTGTTTCTTTCTCTGAGTATGATCCTCCTAGTTGGGTTAAATCTGCTGATAAAGAATCTTTTGGCTATGATATGGGTTGGTGGAAAGAAGAGCATTTTAATGCATCTGATGCAGATGGAAATGGTGTTCTTAACTTAACTGAGTTCAATGACTTTCTTCACCCAGCTGATAGCAACAGCACAAAGCTTCAACAATGGTTGTGCAGGGAGGAAATCAGAGAAAGAGACTCAGACAGAGATGGGAAGGTCAACTTCAAAGAATTTTTCCATGGGCTCTTTGATTTGGTAAGAAACTATGATGAAGAAAGTCACAATGACTCCCATCATTCGGATAATTCATTGGATGCTCCAGCTAGAAAATTGTTTGCTCAGCTTGACCAAGATGGTGACGGGTTGTTATCAGATATTGAACTACTGCCTATAATTGGGAAACTCCATCCGTCCGAGCATTACTATGCAAAGCAACAATCAGAATATATCATTTCACAGGGGAGAGGCCTGTTCTTGGGAAAGAAAGGTGGATCTATCTGCCTGTGTTGGGAGTCTTGGGACCAAATTGTTGGAATGGTTTACTTGGGCGGAAAAACTCTGAGTGGAAATCAAGATTTACGACGAAGGGGAGCAGTGCTTCATGCGGAGACATCCAAAAAATGTGGATTATGTGGAGTCTGGTTGTGCCCCCACAACGCAACCGATGGAGTTGCCGAATTCATGCTCACATGGGGTGGGCAATGGGTTGATACCACTGGAGAAGCACCAAAGGCAGACGTTGACAAAAATGGGCGCCTCACTTTGCCTGAGATGATTGAGAATCCTTATGTATTTTATAGTGCTATTTTCAACGATGATGAAGATGAATATAATGATTACCATGATGAGTTCCGATAA
Protein sequence

>Msa1416190

MGLGSVLIYTILALIVLFFLSSHSPFNNHHSSHRHRRLKLRSNFTLEPSHSRSHSSHQPVPFDPLVAELERHREDKQWEQQHIQHAPAHESQPEWEDFMNAEDFINDEDKFNVTSRLLLLFPKIDVDPADDFVDLHELTMWNLQQAHREVLHRSQREMELHDKNHDGFVSFSEYDPPSWVKSADKESFGYDMGWWKEEHFNASDADGNGVLNLTEFNDFLHPADSNSTKLQQWLCREEIRERDSDRDGKVNFKEFFHGLFDLVRNYDEESHNDSHHSDNSLDAPARKLFAQLDQDGDGLLSDIELLPIIGKLHPSEHYYAKQQSEYIISQGRGLFLGKKGGSICLCWESWDQIVGMVYLGGKTLSGNQDLRRRGAVLHAETSKKCGLCGVWLCPHNATDGVAEFMLTWGGQWVDTTGEAPKADVDKNGRLTLPEMIENPYVFYSAIFNDDEDEYNDYHDEFR*