AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0722220


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0722220 MtrunA17_Chr5g0413621 97.043 575 11 3 1 573 1 571 0.0 1138
Msa0722220 MtrunA17_Chr6g0475401 27.422 547 297 17 1 531 1 463 4.70e-46 170
Msa0722220 MtrunA17_Chr2g0329581 61.157 121 47 0 1 121 1 121 3.29e-44 167
Msa0722220 MtrunA17_Chr4g0033751 57.851 121 50 1 1 121 1 120 6.06e-42 160
Msa0722220 MtrunA17_Chr4g0062781 49.587 121 60 1 1 121 1 120 2.37e-32 132
Msa0722220 MtrunA17_Chr2g0309091 40.650 123 66 3 1 121 1 118 5.21e-20 94.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0722220 AT1G23790.1 51.003 598 188 17 1 573 1 518 0.0 530
Msa0722220 AT1G70340.1 48.409 597 197 19 1 573 1 510 9.68e-166 481
Msa0722220 AT3G14170.2 29.588 534 276 19 1 529 1 439 1.58e-47 174
Msa0722220 AT3G14170.1 29.588 534 275 20 1 529 1 438 3.69e-47 172
Msa0722220 AT1G08760.1 60.331 121 47 1 1 121 1 120 1.79e-42 163
Msa0722220 AT1G08760.1 23.849 239 143 5 314 515 419 655 2.75e-11 67.0
Msa0722220 AT4G13370.1 43.455 191 93 5 1 183 1 184 5.84e-39 152
Msa0722220 AT3G19610.1 43.802 121 66 2 1 120 29 148 5.32e-27 116
Msa0722220 AT2G31920.1 42.520 127 63 4 1 119 1 125 7.49e-21 97.1

Find 139 sgRNAs with CRISPR-Local

Find 224 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTACCTACATTTGACTTAAA+TGG 0.144925 5_1:-19429639 None:intergenic
TACAAATCAAAAGGAGATTT+TGG 0.152041 5_1:+19431325 Msa0722220:CDS
TGGTACACCTGAACCTTTAA+TGG 0.164535 5_1:+19429227 Msa0722220:CDS
TTTGAGCCTGGGCCTGGGTC+TGG 0.171420 5_1:-19429266 None:intergenic
GTTCACCTGTTCCGGTTCTT+AGG 0.175550 5_1:+19429169 Msa0722220:CDS
TACATGTTTGAGCCTGGGCC+TGG 0.220419 5_1:-19429272 None:intergenic
AGAAGCTGGGAATTGGTTTA+TGG 0.224742 5_1:+19431454 Msa0722220:CDS
TTGAGAGTGTGTATTGTATT+TGG 0.238482 5_1:+19431711 Msa0722220:three_prime_UTR
GGGAGGAGCAATGGTGGAAT+TGG 0.257943 5_1:+19429438 Msa0722220:CDS
CCAGTTCTGTTAGAGGTTCT+TGG 0.265426 5_1:+19429298 Msa0722220:CDS
CGAGCAATCTGTGCTGCTTT+AGG 0.274805 5_1:-19431626 None:intergenic
CCCAGGGAGCTGAGTCTTGC+TGG 0.289163 5_1:-19430615 None:intergenic
CAGTTCTGTTAGAGGTTCTT+GGG 0.297458 5_1:+19429299 Msa0722220:CDS
CCATTGCTCCTCCCTCTAAT+TGG 0.307834 5_1:-19429429 None:intergenic
CTTAGGAAAAGTTGTGCTTT+TGG 0.311861 5_1:+19429549 Msa0722220:CDS
TTGATGTAAAAGCCTTGTTT+TGG 0.312605 5_1:-19429030 None:intergenic
CTTAGGCCCATTAAAGGTTC+AGG 0.325269 5_1:-19429234 None:intergenic
TTGAGCCTGGGCCTGGGTCT+GGG 0.329955 5_1:-19429265 None:intergenic
AGCTACTTCAGCTTCAGATT+TGG 0.330327 5_1:+19431142 Msa0722220:CDS
TTTGACTTAAATGGACTTGC+AGG 0.331948 5_1:-19429630 None:intergenic
CTGCTTGTACAATATCATTA+TGG 0.334475 5_1:-19431094 None:intergenic
TTCACCTGTTCCGGTTCTTA+GGG 0.335415 5_1:+19429170 Msa0722220:CDS
AGAACCCGGTTCACCTGTTC+CGG 0.339795 5_1:+19429161 Msa0722220:CDS
TGTAAGCCCAGTTCTGTTAG+AGG 0.342057 5_1:+19429291 Msa0722220:CDS
AGAAGGAAGAGTAACGTAAA+TGG 0.349496 5_1:-19429073 None:intergenic
GAATTACGATGCTCGCTTGT+TGG 0.355819 5_1:-19428952 None:intergenic
GGTACACCTGAACCTTTAAT+GGG 0.362564 5_1:+19429228 Msa0722220:CDS
TTGAAACAGAAGCTGGGAAT+TGG 0.368398 5_1:+19431447 Msa0722220:CDS
TTATACTTAAAGTTATGAAC+TGG 0.369520 5_1:+19431561 Msa0722220:CDS
GGCTAGGCCTCTTATTACTA+TGG 0.370646 5_1:-19431601 None:intergenic
GTTAGAGGTTCTTGGGGTAC+AGG 0.371343 5_1:+19429306 Msa0722220:CDS
AACACTCGCACCTGGAATTC+TGG 0.372129 5_1:+19428894 Msa0722220:CDS
GGAGAAGAAAGGTTCTATCT+TGG 0.374199 5_1:+19431346 Msa0722220:CDS
CCTGGTAGACACCCTTTCAT+TGG 0.380122 5_1:+19429207 Msa0722220:CDS
AGAGTTTCCTGATTGGTCTA+TGG 0.381100 5_1:-19431231 None:intergenic
GGAGGAGCAATGGTGGAATT+GGG 0.384293 5_1:+19429439 Msa0722220:CDS
TGGGCTTACATGTTTGAGCC+TGG 0.389406 5_1:-19429278 None:intergenic
ACTTCTGTTGGTGTTATTGA+TGG 0.396694 5_1:+19430486 Msa0722220:CDS
TTGCTTAAGCTGCAAGATAC+TGG 0.397381 5_1:-19431401 None:intergenic
CCAAGAACCTCTAACAGAAC+TGG 0.404316 5_1:-19429298 None:intergenic
ATCATTTGAACAAAGTATCA+AGG 0.405374 5_1:-19431674 None:intergenic
ACATGTTTGAGCCTGGGCCT+GGG 0.407636 5_1:-19429271 None:intergenic
GGAATTCATCGAGAAGGCTT+TGG 0.409546 5_1:+19431475 Msa0722220:CDS
ATCGAGAAGGCTTTGGAAGC+TGG 0.409777 5_1:+19431482 Msa0722220:CDS
GATCAGTGTACACCAATTAG+AGG 0.412774 5_1:+19429417 Msa0722220:CDS
AAGAACCGGAACAGGTGAAC+CGG 0.417363 5_1:-19429166 None:intergenic
AAAACAAAGGAAGAGTCAAA+AGG 0.421636 5_1:+19431512 Msa0722220:CDS
CCACTCACAGAACACCTAAC+AGG 0.424506 5_1:-19429474 None:intergenic
GGAAAGATGGGACACCTGTT+AGG 0.426168 5_1:+19429460 Msa0722220:CDS
GAGTCTTGCTGGTAAATTCA+TGG 0.427479 5_1:-19430604 None:intergenic
TGATCAAAATCCAAATTAAC+CGG 0.427714 5_1:-19429399 None:intergenic
AAAAGAAGGTGTGTTTATAA+AGG 0.429220 5_1:+19431272 Msa0722220:CDS
AAGCATCTCTTAATGCTTGA+AGG 0.443988 5_1:-19430849 None:intergenic
AATGGTGGAATTGGGAAAGA+TGG 0.455963 5_1:+19429447 Msa0722220:CDS
GAAAGGGTGTCTACCAGGTA+AGG 0.456252 5_1:-19429202 None:intergenic
AAACAAAGGAAGAGTCAAAA+GGG 0.461629 5_1:+19431513 Msa0722220:CDS
ATTCAGTAGAGTTTCCTGAT+TGG 0.466491 5_1:-19431238 None:intergenic
CAAAATTCCATAGACCAATC+AGG 0.466760 5_1:+19431224 Msa0722220:CDS
GTCATCAAGTACAAATCAAA+AGG 0.468971 5_1:+19431316 Msa0722220:CDS
GGGCTTACATGTTTGAGCCT+GGG 0.472081 5_1:-19429277 None:intergenic
ATTCTGGTAAAACTCTTAAA+CGG 0.473300 5_1:+19428910 Msa0722220:CDS
CTTAAGCAACACAGTCAAGT+TGG 0.473573 5_1:+19431415 Msa0722220:CDS
CTGAACCTTTAATGGGCCTA+AGG 0.474948 5_1:+19429235 Msa0722220:CDS
TTAGAGGTTCTTGGGGTACA+GGG 0.475427 5_1:+19429307 Msa0722220:CDS
AACAATACCATAGTAATAAG+AGG 0.475846 5_1:+19431594 Msa0722220:CDS
ACCAGCAAGACTCAGCTCCC+TGG 0.477321 5_1:+19430614 Msa0722220:CDS
CCAATGAAAGGGTGTCTACC+AGG 0.484988 5_1:-19429207 None:intergenic
TAAAGTTATGAACTGGGTTG+AGG 0.488202 5_1:+19431568 Msa0722220:CDS
ACTTTAAGTATAAGTGATTG+AGG 0.490591 5_1:-19431551 None:intergenic
GTGTTTCTGAAAGAGAGAAT+AGG 0.491749 5_1:+19429604 Msa0722220:CDS
TCTCAGTAATAAAATGCAGT+TGG 0.493360 5_1:+19429113 Msa0722220:CDS
CTCAGTAATAAAATGCAGTT+GGG 0.499691 5_1:+19429114 Msa0722220:CDS
AAACAGATTGAAACAGAAGC+TGG 0.500125 5_1:+19431440 Msa0722220:CDS
TTAAGCAACACAGTCAAGTT+GGG 0.500938 5_1:+19431416 Msa0722220:CDS
GCACCCCTAAGAACCGGAAC+AGG 0.501523 5_1:-19429174 None:intergenic
ATGCAAAAGGTGAAAGTCCT+GGG 0.505535 5_1:+19429520 Msa0722220:CDS
GTAAATGGAATGCGAAGAAT+CGG 0.506740 5_1:-19429058 None:intergenic
CCAGCAAGACTCAGCTCCCT+GGG 0.506905 5_1:+19430615 Msa0722220:CDS
GTGAAGAAGAAAGAAGAGGT+TGG 0.514925 5_1:-19428793 None:intergenic
TTAGGTGTTCTGTGAGTGGA+GGG 0.515841 5_1:+19429478 Msa0722220:CDS
GGTAAAATGAATGATGCAAA+AGG 0.520886 5_1:+19429507 Msa0722220:CDS
ACAAAATCATGTTGATCAGA+AGG 0.522160 5_1:-19429090 None:intergenic
TGTGCTGCTTTAGGATGGCT+AGG 0.524805 5_1:-19431617 None:intergenic
GGTTTCGCACCCCTAAGAAC+CGG 0.524925 5_1:-19429180 None:intergenic
GGTTCAGGTGTACCAATGAA+AGG 0.526111 5_1:-19429219 None:intergenic
GCATGTCTTAACCGTGGTGG+CGG 0.526474 5_1:-19430453 None:intergenic
TGAACCTTTAATGGGCCTAA+GGG 0.528581 5_1:+19429236 Msa0722220:CDS
ACAATGGCAACACTCGCACC+TGG 0.529556 5_1:+19428886 Msa0722220:exon
GATGCAAAAGGTGAAAGTCC+TGG 0.530759 5_1:+19429519 Msa0722220:CDS
CTAAAGCAGCACAGATTGCT+CGG 0.535752 5_1:+19431627 Msa0722220:CDS
CTTTAAGTATAAGTGATTGA+GGG 0.548171 5_1:-19431550 None:intergenic
AAGACTCAGCTCCCTGGGAA+AGG 0.549282 5_1:+19430620 Msa0722220:CDS
AACCGTTCAAAACATGTAGC+AGG 0.550629 5_1:-19431062 None:intergenic
CCTGTTAGGTGTTCTGTGAG+TGG 0.551132 5_1:+19429474 Msa0722220:CDS
ATGGTGGAATTGGGAAAGAT+GGG 0.551845 5_1:+19429448 Msa0722220:CDS
GTTCAGGTGTACCAATGAAA+GGG 0.557702 5_1:-19429218 None:intergenic
ATCAAAACAATTTCAAACAA+TGG 0.563558 5_1:+19428870 Msa0722220:exon
CCAATTAGAGGGAGGAGCAA+TGG 0.563791 5_1:+19429429 Msa0722220:CDS
AACAGATTGAAACAGAAGCT+GGG 0.564973 5_1:+19431441 Msa0722220:CDS
AGTCTTGCTGGTAAATTCAT+GGG 0.565122 5_1:-19430603 None:intergenic
CAAGAACCTCTAACAGAACT+GGG 0.565538 5_1:-19429297 None:intergenic
TCATTTGAACAAAGTATCAA+GGG 0.568653 5_1:-19431673 None:intergenic
AGTTCTGTTAGAGGTTCTTG+GGG 0.569485 5_1:+19429300 Msa0722220:CDS
CAATCTGTGCTGCTTTAGGA+TGG 0.570007 5_1:-19431622 None:intergenic
GTTAGGTGTTCTGTGAGTGG+AGG 0.570599 5_1:+19429477 Msa0722220:CDS
GAGATCGGCGGGGACGATGT+CGG 0.571188 5_1:-19428989 None:intergenic
AGCATCTCTTAATGCTTGAA+GGG 0.571799 5_1:-19430848 None:intergenic
GTTTATGGAATTCATCGAGA+AGG 0.578128 5_1:+19431469 Msa0722220:CDS
ATCAGTGTACACCAATTAGA+GGG 0.578815 5_1:+19429418 Msa0722220:CDS
AAGAGTCTCTTCCCAAAACA+AGG 0.582342 5_1:+19429018 Msa0722220:CDS
AGGGGTGCGAAACCCTTACC+TGG 0.585355 5_1:+19429189 Msa0722220:CDS
AGAACCGGAACAGGTGAACC+GGG 0.590619 5_1:-19429165 None:intergenic
CTCTTAAACGGTCTAAACAC+CGG 0.596886 5_1:+19428922 Msa0722220:CDS
CTCGCTTGTTGGTTTCACGC+CGG 0.597156 5_1:-19428941 None:intergenic
GAGTGTGAAGAAGAAAGAAG+AGG 0.597418 5_1:-19428797 None:intergenic
AAGAAGAAGAATGATGATGA+TGG 0.597763 5_1:+19429333 Msa0722220:CDS
ATTAGAGGGAGGAGCAATGG+TGG 0.600477 5_1:+19429432 Msa0722220:CDS
TATACTTAAAGTTATGAACT+GGG 0.600506 5_1:+19431562 Msa0722220:CDS
AATGATGATGATGGTGATGG+TGG 0.604163 5_1:+19429342 Msa0722220:CDS
TTGCTGGTAAATTCATGGGT+AGG 0.606986 5_1:-19430599 None:intergenic
AAGAATGATGATGATGGTGA+TGG 0.608637 5_1:+19429339 Msa0722220:CDS
TCACCTGTTCCGGTTCTTAG+GGG 0.620850 5_1:+19429171 Msa0722220:CDS
AGACTGAGATTTATGTTGAG+AGG 0.635242 5_1:-19430538 None:intergenic
GCAAAATAGCAGGAAAAGAG+AGG 0.637242 5_1:+19430423 Msa0722220:intron
GAGGTTCTTGGGGTACAGGG+AGG 0.639196 5_1:+19429310 Msa0722220:CDS
AAAGGGTGTCTACCAGGTAA+GGG 0.643233 5_1:-19429201 None:intergenic
AACAAAGGAAGAGTCAAAAG+GGG 0.656903 5_1:+19431514 Msa0722220:CDS
GCAAGAGTGACGACTTCTGT+TGG 0.673208 5_1:+19430474 Msa0722220:CDS
CTTGCATGTCTTAACCGTGG+TGG 0.675866 5_1:-19430456 None:intergenic
TGCAAAAGGTGAAAGTCCTG+GGG 0.682008 5_1:+19429521 Msa0722220:CDS
AAATAGCAGGAAAAGAGAGG+TGG 0.685301 5_1:+19430426 Msa0722220:intron
TATGTTGATAGATTAGAACC+CGG 0.693093 5_1:+19429147 Msa0722220:CDS
GGATCGAACTACTGTCTCAG+TGG 0.697237 5_1:-19430875 None:intergenic
AGTGTACACCAATTAGAGGG+AGG 0.703184 5_1:+19429421 Msa0722220:CDS
ACTCTTGCATGTCTTAACCG+TGG 0.707486 5_1:-19430459 None:intergenic
GCAAAAGGTGAAAGTCCTGG+GGG 0.710019 5_1:+19429522 Msa0722220:CDS
GAGGTGGTACTCCGCCACCA+CGG 0.740756 5_1:+19430442 Msa0722220:CDS
ATAACCTCGTGTAAAACGTG+TGG 0.759258 5_1:-19431200 None:intergenic
CAAAAGGTGAAAGTCCTGGG+GGG 0.772252 5_1:+19429523 Msa0722220:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAGGATTTAAATAAAATTCA+GGG - chr5_1:19430742-19430761 None:intergenic 15.0%
!! AAAGGATTTAAATAAAATTC+AGG - chr5_1:19430743-19430762 None:intergenic 15.0%
!!! TTTTGGTGTTACTATTTTTA+GGG - chr5_1:19428835-19428854 None:intergenic 20.0%
!!! TTTTTGGTGTTACTATTTTT+AGG - chr5_1:19428836-19428855 None:intergenic 20.0%
!!! AATTGTTTTGATGAGATTTT+GGG - chr5_1:19428862-19428881 None:intergenic 20.0%
!!! AAATTGTTTTGATGAGATTT+TGG - chr5_1:19428863-19428882 None:intergenic 20.0%
!! ATCAAAACAATTTCAAACAA+TGG + chr5_1:19428870-19428889 Msa0722220:exon 20.0%
!! ATATTACAATCCTAGATATT+AGG - chr5_1:19430333-19430352 None:intergenic 20.0%
!! ATTTAAATAAAATTCAGGGA+CGG - chr5_1:19430738-19430757 None:intergenic 20.0%
!! AATAAGGAATACATACTTAA+GGG - chr5_1:19430899-19430918 None:intergenic 20.0%
!!! TCCTTATTCAATTCTATTTT+TGG + chr5_1:19430911-19430930 Msa0722220:intron 20.0%
!!! CCTTATTCAATTCTATTTTT+GGG + chr5_1:19430912-19430931 Msa0722220:intron 20.0%
!!! CTTATTCAATTCTATTTTTG+GGG + chr5_1:19430913-19430932 Msa0722220:intron 20.0%
!!! ATCTTTGAACTTTTTCTTTT+AGG + chr5_1:19431000-19431019 Msa0722220:intron 20.0%
!! TGTGTTTATAAAGGAAAAAT+GGG + chr5_1:19431281-19431300 Msa0722220:CDS 20.0%
!! TTATACTTAAAGTTATGAAC+TGG + chr5_1:19431561-19431580 Msa0722220:CDS 20.0%
!! TATACTTAAAGTTATGAACT+GGG + chr5_1:19431562-19431581 Msa0722220:CDS 20.0%
!!! ATTTTTAGGGTTTTCAAGAA+TGG - chr5_1:19428822-19428841 None:intergenic 25.0%
!!! ATTGTTTTGATGAGATTTTG+GGG - chr5_1:19428861-19428880 None:intergenic 25.0%
! ATTCTGGTAAAACTCTTAAA+CGG + chr5_1:19428910-19428929 Msa0722220:CDS 25.0%
!! TTAACCGGTTTAAAAATCAT+CGG - chr5_1:19429387-19429406 None:intergenic 25.0%
!! GATTTTTAAACCGGTTAATT+TGG + chr5_1:19429389-19429408 Msa0722220:CDS 25.0%
! TGATCAAAATCCAAATTAAC+CGG - chr5_1:19429402-19429421 None:intergenic 25.0%
!!! TGATTCTTTCATTTTTTGTG+TGG + chr5_1:19429678-19429697 Msa0722220:intron 25.0%
!!! AAGCTAGTTTTTTTACAGAA+AGG + chr5_1:19429728-19429747 Msa0722220:intron 25.0%
!! CCTAAATTACACTCATTTTA+AGG - chr5_1:19429776-19429795 None:intergenic 25.0%
! CCTTAAAATGAGTGTAATTT+AGG + chr5_1:19429773-19429792 Msa0722220:intron 25.0%
! CGACTAAACGATTATAATTT+AGG + chr5_1:19430206-19430225 Msa0722220:intron 25.0%
! CAAACATAACATATCACAAT+TGG - chr5_1:19430258-19430277 None:intergenic 25.0%
!! CTATTTAAGTCCTAAACTTT+TGG + chr5_1:19430687-19430706 Msa0722220:intron 25.0%
! GATTATTATAGACACATCAA+AGG - chr5_1:19430761-19430780 None:intergenic 25.0%
! GAATAAGGAATACATACTTA+AGG - chr5_1:19430900-19430919 None:intergenic 25.0%
! CCCAAAAATAGAATTGAATA+AGG - chr5_1:19430915-19430934 None:intergenic 25.0%
!! AAAAGAAGGTGTGTTTATAA+AGG + chr5_1:19431272-19431291 Msa0722220:CDS 25.0%
! GTGTGTTTATAAAGGAAAAA+TGG + chr5_1:19431280-19431299 Msa0722220:CDS 25.0%
!! TACAAATCAAAAGGAGATTT+TGG + chr5_1:19431325-19431344 Msa0722220:CDS 25.0%
!! TTCTCATCATTTTCAACAAT+TGG - chr5_1:19431374-19431393 None:intergenic 25.0%
! CTTTAAGTATAAGTGATTGA+GGG - chr5_1:19431553-19431572 None:intergenic 25.0%
! ACTTTAAGTATAAGTGATTG+AGG - chr5_1:19431554-19431573 None:intergenic 25.0%
! AACAATACCATAGTAATAAG+AGG + chr5_1:19431594-19431613 Msa0722220:CDS 25.0%
!! TCATTTGAACAAAGTATCAA+GGG - chr5_1:19431676-19431695 None:intergenic 25.0%
!! ATCATTTGAACAAAGTATCA+AGG - chr5_1:19431677-19431696 None:intergenic 25.0%
!! ATGAGATTTTGGGGAATTTT+TGG - chr5_1:19428852-19428871 None:intergenic 30.0%
!!! TGATGTAAAAGCCTTGTTTT+GGG - chr5_1:19429032-19429051 None:intergenic 30.0%
!!! TTGATGTAAAAGCCTTGTTT+TGG - chr5_1:19429033-19429052 None:intergenic 30.0%
ACAAAATCATGTTGATCAGA+AGG - chr5_1:19429093-19429112 None:intergenic 30.0%
TCTCAGTAATAAAATGCAGT+TGG + chr5_1:19429113-19429132 Msa0722220:CDS 30.0%
CTCAGTAATAAAATGCAGTT+GGG + chr5_1:19429114-19429133 Msa0722220:CDS 30.0%
! TATGTTGATAGATTAGAACC+CGG + chr5_1:19429147-19429166 Msa0722220:CDS 30.0%
! AAGAAGAAGAATGATGATGA+TGG + chr5_1:19429333-19429352 Msa0722220:CDS 30.0%
! TTTGCCGATGATTTTTAAAC+CGG + chr5_1:19429380-19429399 Msa0722220:CDS 30.0%
GGTAAAATGAATGATGCAAA+AGG + chr5_1:19429507-19429526 Msa0722220:CDS 30.0%
AGTCCATTTAAGTCAAATGT+AGG + chr5_1:19429636-19429655 Msa0722220:intron 30.0%
! GTACCTACATTTGACTTAAA+TGG - chr5_1:19429642-19429661 None:intergenic 30.0%
GTTATGTTTACGCGAAATTT+AGG + chr5_1:19429837-19429856 Msa0722220:intron 30.0%
AGTGCAATTGTGATTAGTAT+GGG + chr5_1:19430078-19430097 Msa0722220:intron 30.0%
GATTGTAACTAATGTCTTTC+CGG + chr5_1:19430110-19430129 Msa0722220:intron 30.0%
TGCAATTCTTCCTAATATCT+AGG + chr5_1:19430320-19430339 Msa0722220:intron 30.0%
GATTAATTGTGCAAAATAGC+AGG + chr5_1:19430413-19430432 Msa0722220:intron 30.0%
AATAAGCTGAGTAAGTTCAA+TGG - chr5_1:19430666-19430685 None:intergenic 30.0%
CTGCTTGTACAATATCATTA+TGG - chr5_1:19431097-19431116 None:intergenic 30.0%
AATCAAACGTGTCAAAAAGA+AGG + chr5_1:19431258-19431277 Msa0722220:CDS 30.0%
GTCATCAAGTACAAATCAAA+AGG + chr5_1:19431316-19431335 Msa0722220:CDS 30.0%
!! AGCTGGTTTGAAAAAAACAA+AGG + chr5_1:19431499-19431518 Msa0722220:CDS 30.0%
AAAACAAAGGAAGAGTCAAA+AGG + chr5_1:19431512-19431531 Msa0722220:CDS 30.0%
AAACAAAGGAAGAGTCAAAA+GGG + chr5_1:19431513-19431532 Msa0722220:CDS 30.0%
! TTGAGAGTGTGTATTGTATT+TGG + chr5_1:19431711-19431730 Msa0722220:three_prime_UTR 30.0%
CAACTATGAAAAACTCAAAG+TGG - chr5_1:19431793-19431812 None:intergenic 30.0%
! AAGAGTTTTACCAGAATTCC+AGG - chr5_1:19428907-19428926 None:intergenic 35.0%
GTAAATGGAATGCGAAGAAT+CGG - chr5_1:19429061-19429080 None:intergenic 35.0%
AGAAGGAAGAGTAACGTAAA+TGG - chr5_1:19429076-19429095 None:intergenic 35.0%
!! AAGAATGATGATGATGGTGA+TGG + chr5_1:19429339-19429358 Msa0722220:CDS 35.0%
TTAAAAATCATCGGCAAAGG+CGG - chr5_1:19429378-19429397 None:intergenic 35.0%
GGTTTAAAAATCATCGGCAA+AGG - chr5_1:19429381-19429400 None:intergenic 35.0%
ATCAGTGTACACCAATTAGA+GGG + chr5_1:19429418-19429437 Msa0722220:CDS 35.0%
! CTTAGGAAAAGTTGTGCTTT+TGG + chr5_1:19429549-19429568 Msa0722220:CDS 35.0%
!!! TGTGCTTTTGGTTCTTCTAA+TGG + chr5_1:19429561-19429580 Msa0722220:CDS 35.0%
!!! GTGCTTTTGGTTCTTCTAAT+GGG + chr5_1:19429562-19429581 Msa0722220:CDS 35.0%
! GTGTTTCTGAAAGAGAGAAT+AGG + chr5_1:19429604-19429623 Msa0722220:CDS 35.0%
! TTTGACTTAAATGGACTTGC+AGG - chr5_1:19429633-19429652 None:intergenic 35.0%
CAAGTATAGCTAACATGTGT+CGG - chr5_1:19429885-19429904 None:intergenic 35.0%
GAGTGCAATTGTGATTAGTA+TGG + chr5_1:19430077-19430096 Msa0722220:intron 35.0%
!! AATTACACTCATTTTCAGGC+CGG - chr5_1:19430132-19430151 None:intergenic 35.0%
! CCTCAATTACACTCATTTTC+AGG - chr5_1:19430136-19430155 None:intergenic 35.0%
CCTGAAAATGAGTGTAATTG+AGG + chr5_1:19430133-19430152 Msa0722220:intron 35.0%
!! ACTTCTGTTGGTGTTATTGA+TGG + chr5_1:19430486-19430505 Msa0722220:CDS 35.0%
TGATGGAGTTACTCAAAAAG+AGG + chr5_1:19430503-19430522 Msa0722220:CDS 35.0%
AGACTGAGATTTATGTTGAG+AGG - chr5_1:19430541-19430560 None:intergenic 35.0%
AGTCTTGCTGGTAAATTCAT+GGG - chr5_1:19430606-19430625 None:intergenic 35.0%
ACAAAAATGTACCTTTCCCA+GGG - chr5_1:19430634-19430653 None:intergenic 35.0%
AACAAAAATGTACCTTTCCC+AGG - chr5_1:19430635-19430654 None:intergenic 35.0%
TATCACGCTACCAAAAGTTT+AGG - chr5_1:19430700-19430719 None:intergenic 35.0%
! TGTATTTTGTGTTGCATGAC+AGG + chr5_1:19430789-19430808 Msa0722220:intron 35.0%
AGCATCTCTTAATGCTTGAA+GGG - chr5_1:19430851-19430870 None:intergenic 35.0%
AAGCATCTCTTAATGCTTGA+AGG - chr5_1:19430852-19430871 None:intergenic 35.0%
!! TACATGTTTTGAACGGTTTC+TGG + chr5_1:19431067-19431086 Msa0722220:CDS 35.0%
CAAAATTCCATAGACCAATC+AGG + chr5_1:19431224-19431243 Msa0722220:CDS 35.0%
ATTCAGTAGAGTTTCCTGAT+TGG - chr5_1:19431241-19431260 None:intergenic 35.0%
!! AAGGAGATTTTGGAGAAGAA+AGG + chr5_1:19431335-19431354 Msa0722220:CDS 35.0%
TTAAGCAACACAGTCAAGTT+GGG + chr5_1:19431416-19431435 Msa0722220:CDS 35.0%
AAACAGATTGAAACAGAAGC+TGG + chr5_1:19431440-19431459 Msa0722220:CDS 35.0%
AACAGATTGAAACAGAAGCT+GGG + chr5_1:19431441-19431460 Msa0722220:CDS 35.0%
GTTTATGGAATTCATCGAGA+AGG + chr5_1:19431469-19431488 Msa0722220:CDS 35.0%
AACAAAGGAAGAGTCAAAAG+GGG + chr5_1:19431514-19431533 Msa0722220:CDS 35.0%
TAAAGTTATGAACTGGGTTG+AGG + chr5_1:19431568-19431587 Msa0722220:CDS 35.0%
GTGAAGAAGAAAGAAGAGGT+TGG - chr5_1:19428796-19428815 None:intergenic 40.0%
GAGTGTGAAGAAGAAAGAAG+AGG - chr5_1:19428800-19428819 None:intergenic 40.0%
CTCTTAAACGGTCTAAACAC+CGG + chr5_1:19428922-19428941 Msa0722220:CDS 40.0%
AAGAGTCTCTTCCCAAAACA+AGG + chr5_1:19429018-19429037 Msa0722220:CDS 40.0%
GTTCAGGTGTACCAATGAAA+GGG - chr5_1:19429221-19429240 None:intergenic 40.0%
TGGTACACCTGAACCTTTAA+TGG + chr5_1:19429227-19429246 Msa0722220:CDS 40.0%
GGTACACCTGAACCTTTAAT+GGG + chr5_1:19429228-19429247 Msa0722220:CDS 40.0%
! TGAACCTTTAATGGGCCTAA+GGG + chr5_1:19429236-19429255 Msa0722220:CDS 40.0%
! TTTTCCCTTAGGCCCATTAA+AGG - chr5_1:19429243-19429262 None:intergenic 40.0%
CAAGAACCTCTAACAGAACT+GGG - chr5_1:19429300-19429319 None:intergenic 40.0%
CAGTTCTGTTAGAGGTTCTT+GGG + chr5_1:19429299-19429318 Msa0722220:CDS 40.0%
AGTTCTGTTAGAGGTTCTTG+GGG + chr5_1:19429300-19429319 Msa0722220:CDS 40.0%
!! AATGATGATGATGGTGATGG+TGG + chr5_1:19429342-19429361 Msa0722220:CDS 40.0%
GATCAGTGTACACCAATTAG+AGG + chr5_1:19429417-19429436 Msa0722220:CDS 40.0%
! AATGGTGGAATTGGGAAAGA+TGG + chr5_1:19429447-19429466 Msa0722220:CDS 40.0%
! ATGGTGGAATTGGGAAAGAT+GGG + chr5_1:19429448-19429467 Msa0722220:CDS 40.0%
ATGCAAAAGGTGAAAGTCCT+GGG + chr5_1:19429520-19429539 Msa0722220:CDS 40.0%
AGGCTGCAAAGACATCAAAA+GGG - chr5_1:19429756-19429775 None:intergenic 40.0%
AAGGCTGCAAAGACATCAAA+AGG - chr5_1:19429757-19429776 None:intergenic 40.0%
GTGTGACTTGACTGTATTTG+AGG + chr5_1:19430277-19430296 Msa0722220:intron 40.0%
GCAAAATAGCAGGAAAAGAG+AGG + chr5_1:19430423-19430442 Msa0722220:intron 40.0%
AAATAGCAGGAAAAGAGAGG+TGG + chr5_1:19430426-19430445 Msa0722220:intron 40.0%
TTGCTGGTAAATTCATGGGT+AGG - chr5_1:19430602-19430621 None:intergenic 40.0%
GAGTCTTGCTGGTAAATTCA+TGG - chr5_1:19430607-19430626 None:intergenic 40.0%
!!! CTTTTGGTAGCGTGATATCA+CGG + chr5_1:19430703-19430722 Msa0722220:intron 40.0%
AAATTCAGGGACGGCAAATA+TGG - chr5_1:19430729-19430748 None:intergenic 40.0%
!! CACCTGCTACATGTTTTGAA+CGG + chr5_1:19431060-19431079 Msa0722220:CDS 40.0%
AACCGTTCAAAACATGTAGC+AGG - chr5_1:19431065-19431084 None:intergenic 40.0%
AGCTACTTCAGCTTCAGATT+TGG + chr5_1:19431142-19431161 Msa0722220:CDS 40.0%
ATAACCTCGTGTAAAACGTG+TGG - chr5_1:19431203-19431222 None:intergenic 40.0%
!! AGAGTTTCCTGATTGGTCTA+TGG - chr5_1:19431234-19431253 None:intergenic 40.0%
GGAGAAGAAAGGTTCTATCT+TGG + chr5_1:19431346-19431365 Msa0722220:CDS 40.0%
TTGCTTAAGCTGCAAGATAC+TGG - chr5_1:19431404-19431423 None:intergenic 40.0%
CTTAAGCAACACAGTCAAGT+TGG + chr5_1:19431415-19431434 Msa0722220:CDS 40.0%
TTGAAACAGAAGCTGGGAAT+TGG + chr5_1:19431447-19431466 Msa0722220:CDS 40.0%
! AGAAGCTGGGAATTGGTTTA+TGG + chr5_1:19431454-19431473 Msa0722220:CDS 40.0%
GAATTACGATGCTCGCTTGT+TGG - chr5_1:19428955-19428974 None:intergenic 45.0%
! GAGACTCTTTTCGTCGAGAT+CGG - chr5_1:19429007-19429026 None:intergenic 45.0%
TTCACCTGTTCCGGTTCTTA+GGG + chr5_1:19429170-19429189 Msa0722220:CDS 45.0%
!! AAAGGGTGTCTACCAGGTAA+GGG - chr5_1:19429204-19429223 None:intergenic 45.0%
GGTTCAGGTGTACCAATGAA+AGG - chr5_1:19429222-19429241 None:intergenic 45.0%
CTTAGGCCCATTAAAGGTTC+AGG - chr5_1:19429237-19429256 None:intergenic 45.0%
! CTGAACCTTTAATGGGCCTA+AGG + chr5_1:19429235-19429254 Msa0722220:CDS 45.0%
TGTAAGCCCAGTTCTGTTAG+AGG + chr5_1:19429291-19429310 Msa0722220:CDS 45.0%
CCAAGAACCTCTAACAGAAC+TGG - chr5_1:19429301-19429320 None:intergenic 45.0%
CCAGTTCTGTTAGAGGTTCT+TGG + chr5_1:19429298-19429317 Msa0722220:CDS 45.0%
TTAGAGGTTCTTGGGGTACA+GGG + chr5_1:19429307-19429326 Msa0722220:CDS 45.0%
AGTGTACACCAATTAGAGGG+AGG + chr5_1:19429421-19429440 Msa0722220:CDS 45.0%
TTAGGTGTTCTGTGAGTGGA+GGG + chr5_1:19429478-19429497 Msa0722220:CDS 45.0%
GATGCAAAAGGTGAAAGTCC+TGG + chr5_1:19429519-19429538 Msa0722220:CDS 45.0%
TGCAAAAGGTGAAAGTCCTG+GGG + chr5_1:19429521-19429540 Msa0722220:CDS 45.0%
! TAGCTATACTTGTGTCGACG+TGG + chr5_1:19429893-19429912 Msa0722220:intron 45.0%
GTCATGTTCACGCGAAATTG+AGG + chr5_1:19429948-19429967 Msa0722220:intron 45.0%
CAGCTACAGCTAACATGTGT+CGG - chr5_1:19429996-19430015 None:intergenic 45.0%
TGTAGTTTCCGTGTCTGTGT+TGG + chr5_1:19430044-19430063 Msa0722220:intron 45.0%
CTGAAACACCAACACAGACA+CGG - chr5_1:19430055-19430074 None:intergenic 45.0%
ACTCTTGCATGTCTTAACCG+TGG - chr5_1:19430462-19430481 None:intergenic 45.0%
! ACAACCACACGTTTTACACG+AGG + chr5_1:19431196-19431215 Msa0722220:CDS 45.0%
GGAATTCATCGAGAAGGCTT+TGG + chr5_1:19431475-19431494 Msa0722220:CDS 45.0%
GGCTAGGCCTCTTATTACTA+TGG - chr5_1:19431604-19431623 None:intergenic 45.0%
!! CAATCTGTGCTGCTTTAGGA+TGG - chr5_1:19431625-19431644 None:intergenic 45.0%
CTAAAGCAGCACAGATTGCT+CGG + chr5_1:19431627-19431646 Msa0722220:CDS 45.0%
AACACTCGCACCTGGAATTC+TGG + chr5_1:19428894-19428913 Msa0722220:CDS 50.0%
! ACTCTTTTCGTCGAGATCGG+CGG - chr5_1:19429004-19429023 None:intergenic 50.0%
AAGAACCGGAACAGGTGAAC+CGG - chr5_1:19429169-19429188 None:intergenic 50.0%
GTTCACCTGTTCCGGTTCTT+AGG + chr5_1:19429169-19429188 Msa0722220:CDS 50.0%
TCACCTGTTCCGGTTCTTAG+GGG + chr5_1:19429171-19429190 Msa0722220:CDS 50.0%
!! GAAAGGGTGTCTACCAGGTA+AGG - chr5_1:19429205-19429224 None:intergenic 50.0%
!! CCAATGAAAGGGTGTCTACC+AGG - chr5_1:19429210-19429229 None:intergenic 50.0%
CCTGGTAGACACCCTTTCAT+TGG + chr5_1:19429207-19429226 Msa0722220:CDS 50.0%
!!! GGGTCTGGGTTTTTTCCCTT+AGG - chr5_1:19429254-19429273 None:intergenic 50.0%
AAGGGAAAAAACCCAGACCC+AGG + chr5_1:19429254-19429273 Msa0722220:CDS 50.0%
GGGCTTACATGTTTGAGCCT+GGG - chr5_1:19429280-19429299 None:intergenic 50.0%
TGGGCTTACATGTTTGAGCC+TGG - chr5_1:19429281-19429300 None:intergenic 50.0%
GTTAGAGGTTCTTGGGGTAC+AGG + chr5_1:19429306-19429325 Msa0722220:CDS 50.0%
CCATTGCTCCTCCCTCTAAT+TGG - chr5_1:19429432-19429451 None:intergenic 50.0%
CCAATTAGAGGGAGGAGCAA+TGG + chr5_1:19429429-19429448 Msa0722220:CDS 50.0%
ATTAGAGGGAGGAGCAATGG+TGG + chr5_1:19429432-19429451 Msa0722220:CDS 50.0%
! GGAGGAGCAATGGTGGAATT+GGG + chr5_1:19429439-19429458 Msa0722220:CDS 50.0%
GGAAAGATGGGACACCTGTT+AGG + chr5_1:19429460-19429479 Msa0722220:CDS 50.0%
CCACTCACAGAACACCTAAC+AGG - chr5_1:19429477-19429496 None:intergenic 50.0%
CCTGTTAGGTGTTCTGTGAG+TGG + chr5_1:19429474-19429493 Msa0722220:CDS 50.0%
GTTAGGTGTTCTGTGAGTGG+AGG + chr5_1:19429477-19429496 Msa0722220:CDS 50.0%
! TCTGTGAGTGGAGGGCTTTT+TGG + chr5_1:19429486-19429505 Msa0722220:CDS 50.0%
GCAAAAGGTGAAAGTCCTGG+GGG + chr5_1:19429522-19429541 Msa0722220:CDS 50.0%
CAAAAGGTGAAAGTCCTGGG+GGG + chr5_1:19429523-19429542 Msa0722220:CDS 50.0%
CATGTGTCGGAGCTACAAAG+AGG - chr5_1:19429872-19429891 None:intergenic 50.0%
CTTGCATGTCTTAACCGTGG+TGG - chr5_1:19430459-19430478 None:intergenic 50.0%
GCAAGAGTGACGACTTCTGT+TGG + chr5_1:19430474-19430493 Msa0722220:CDS 50.0%
GGATCGAACTACTGTCTCAG+TGG - chr5_1:19430878-19430897 None:intergenic 50.0%
!! ATCGAGAAGGCTTTGGAAGC+TGG + chr5_1:19431482-19431501 Msa0722220:CDS 50.0%
!! TGTGCTGCTTTAGGATGGCT+AGG - chr5_1:19431620-19431639 None:intergenic 50.0%
!! CGAGCAATCTGTGCTGCTTT+AGG - chr5_1:19431629-19431648 None:intergenic 50.0%
ACAATGGCAACACTCGCACC+TGG + chr5_1:19428886-19428905 Msa0722220:exon 55.0%
!! CTCGCTTGTTGGTTTCACGC+CGG - chr5_1:19428944-19428963 None:intergenic 55.0%
! TCTTTTCGTCGAGATCGGCG+GGG - chr5_1:19429002-19429021 None:intergenic 55.0%
! CTCTTTTCGTCGAGATCGGC+GGG - chr5_1:19429003-19429022 None:intergenic 55.0%
AGAACCCGGTTCACCTGTTC+CGG + chr5_1:19429161-19429180 Msa0722220:CDS 55.0%
AGAACCGGAACAGGTGAACC+GGG - chr5_1:19429168-19429187 None:intergenic 55.0%
GGTTTCGCACCCCTAAGAAC+CGG - chr5_1:19429183-19429202 None:intergenic 55.0%
ACATGTTTGAGCCTGGGCCT+GGG - chr5_1:19429274-19429293 None:intergenic 55.0%
TACATGTTTGAGCCTGGGCC+TGG - chr5_1:19429275-19429294 None:intergenic 55.0%
! GGGAGGAGCAATGGTGGAAT+TGG + chr5_1:19429438-19429457 Msa0722220:CDS 55.0%
AAAGTCCTGGGGGGTTGCTT+AGG + chr5_1:19429532-19429551 Msa0722220:CDS 55.0%
! CTTTTCCTAAGCAACCCCCC+AGG - chr5_1:19429540-19429559 None:intergenic 55.0%
CATGTGTCGGAGCTACAGAG+AGG - chr5_1:19429983-19430002 None:intergenic 55.0%
GCATGTCTTAACCGTGGTGG+CGG - chr5_1:19430456-19430475 None:intergenic 55.0%
AAGACTCAGCTCCCTGGGAA+AGG + chr5_1:19430620-19430639 Msa0722220:CDS 55.0%
GCACCCCTAAGAACCGGAAC+AGG - chr5_1:19429177-19429196 None:intergenic 60.0%
! AGGGGTGCGAAACCCTTACC+TGG + chr5_1:19429189-19429208 Msa0722220:CDS 60.0%
AAAAACCCAGACCCAGGCCC+AGG + chr5_1:19429260-19429279 Msa0722220:CDS 60.0%
GAGGTTCTTGGGGTACAGGG+AGG + chr5_1:19429310-19429329 Msa0722220:CDS 60.0%
ACCAGCAAGACTCAGCTCCC+TGG + chr5_1:19430614-19430633 Msa0722220:CDS 60.0%
CCAGCAAGACTCAGCTCCCT+GGG + chr5_1:19430615-19430634 Msa0722220:CDS 60.0%
GAGATCGGCGGGGACGATGT+CGG - chr5_1:19428992-19429011 None:intergenic 65.0%
TTGAGCCTGGGCCTGGGTCT+GGG - chr5_1:19429268-19429287 None:intergenic 65.0%
TTTGAGCCTGGGCCTGGGTC+TGG - chr5_1:19429269-19429288 None:intergenic 65.0%
GAGGTGGTACTCCGCCACCA+CGG + chr5_1:19430442-19430461 Msa0722220:CDS 65.0%
CCCAGGGAGCTGAGTCTTGC+TGG - chr5_1:19430618-19430637 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr5_1 gene 19428777 19431831 19428777 ID=Msa0722220;Name=Msa0722220
chr5_1 mRNA 19428777 19431831 19428777 ID=Msa0722220-mRNA-1;Parent=Msa0722220;Name=Msa0722220-mRNA-1;_AED=0.22;_eAED=0.22;_QI=112|0.66|0.75|1|1|1|4|152|573
chr5_1 exon 19428777 19429653 19428777 ID=Msa0722220-mRNA-1:exon:7338;Parent=Msa0722220-mRNA-1
chr5_1 exon 19430435 19430641 19430435 ID=Msa0722220-mRNA-1:exon:7339;Parent=Msa0722220-mRNA-1
chr5_1 exon 19430811 19430902 19430811 ID=Msa0722220-mRNA-1:exon:7340;Parent=Msa0722220-mRNA-1
chr5_1 exon 19431022 19431831 19431022 ID=Msa0722220-mRNA-1:exon:7341;Parent=Msa0722220-mRNA-1
chr5_1 five_prime_UTR 19428777 19428888 19428777 ID=Msa0722220-mRNA-1:five_prime_utr;Parent=Msa0722220-mRNA-1
chr5_1 CDS 19428889 19429653 19428889 ID=Msa0722220-mRNA-1:cds;Parent=Msa0722220-mRNA-1
chr5_1 CDS 19430435 19430641 19430435 ID=Msa0722220-mRNA-1:cds;Parent=Msa0722220-mRNA-1
chr5_1 CDS 19430811 19430902 19430811 ID=Msa0722220-mRNA-1:cds;Parent=Msa0722220-mRNA-1
chr5_1 CDS 19431022 19431679 19431022 ID=Msa0722220-mRNA-1:cds;Parent=Msa0722220-mRNA-1
chr5_1 three_prime_UTR 19431680 19431831 19431680 ID=Msa0722220-mRNA-1:three_prime_utr;Parent=Msa0722220-mRNA-1
Gene Sequence

>Msa0722220

ATGGCAACACTCGCACCTGGAATTCTGGTAAAACTCTTAAACGGTCTAAACACCGGCGTGAAACCAACAAGCGAGCATCGTAATTCACTCTTACAAGTCACCGACATCGTCCCCGCCGATCTCGACGAAAAGAGTCTCTTCCCAAAACAAGGCTTTTACATCAAAGTCTCCGATTCTTCGCATTCCATTTACGTTACTCTTCCTTCTGATCAACATGATTTTGTTCTCAGTAATAAAATGCAGTTGGGTCAGTTTATCTATGTTGATAGATTAGAACCCGGTTCACCTGTTCCGGTTCTTAGGGGTGCGAAACCCTTACCTGGTAGACACCCTTTCATTGGTACACCTGAACCTTTAATGGGCCTAAGGGAAAAAACCCAGACCCAGGCCCAGGCTCAAACATGTAAGCCCAGTTCTGTTAGAGGTTCTTGGGGTACAGGGAGGAAGAAGAAGAATGATGATGATGGTGATGGTGGTGATTTTTTTCCGCCTTTGCCGATGATTTTTAAACCGGTTAATTTGGATTTTGATCAGTGTACACCAATTAGAGGGAGGAGCAATGGTGGAATTGGGAAAGATGGGACACCTGTTAGGTGTTCTGTGAGTGGAGGGCTTTTTGGTAAAATGAATGATGCAAAAGGTGAAAGTCCTGGGGGGTTGCTTAGGAAAAGTTGTGCTTTTGGTTCTTCTAATGGGAAGATTACAAGAAGTAGAAGTGTTTCTGAAAGAGAGAATAGGATACCTGCAAGTCCATTTAAGTCAAATGAAAAGAGAGGTGGTACTCCGCCACCACGGTTAAGACATGCAAGAGTGACGACTTCTGTTGGTGTTATTGATGGAGTTACTCAAAAAGAGGACTCAAGTGTCACCTCTCAACATAAATCTCAGTCTACAACTAATTCAGCTTTTGATGATTCTAACAATCTTAGCCTACCCATGAATTTACCAGCAAGACTCAGCTCCCTGGGAAAGGAAGCTGTGCAGCAAAGAGAAGTAGCTCAAAAGATTGCCCTTCAAGCATTAAGAGATGCTTCAGCCACTGAGACAGTAGTTCGATCCCTTAAGATGTTTTCTAATTTAGCAAAATCAGCTCGAGCTGATGCACCTGCTACATGTTTTGAACGGTTTCTGGAATTCCATAATGATATTGTACAAGCAGTTAGTGCAATGATGTCAATGCAAGCAGCTACTTCAGCTTCAGATTTGGCTTCAAAATCAGATAAACAAGTTGAAGAAGAACAACCACACGTTTTACACGAGGTTATGCAAAATTCCATAGACCAATCAGGAAACTCTACTGAATCAAACGTGTCAAAAAGAAGGTGTGTTTATAAAGGAAAAATGGGAAAGCTGCTGAAGTCATCAAGTACAAATCAAAAGGAGATTTTGGAGAAGAAAGGTTCTATCTTGGAACCAATTGTTGAAAATGATGAGAACAAGAAACCAGTATCTTGCAGCTTAAGCAACACAGTCAAGTTGGGAAAACAGATTGAAACAGAAGCTGGGAATTGGTTTATGGAATTCATCGAGAAGGCTTTGGAAGCTGGTTTGAAAAAAACAAAGGAAGAGTCAAAAGGGGATGTTCGTAAAGTCCCTCAATCACTTATACTTAAAGTTATGAACTGGGTTGAGGTAGAACAATACCATAGTAATAAGAGGCCTAGCCATCCTAAAGCAGCACAGATTGCTCGGAAGTTGAGAATAAAGATTAAGAACCCTTGA

Protein sequence

>Msa0722220

MATLAPGILVKLLNGLNTGVKPTSEHRNSLLQVTDIVPADLDEKSLFPKQGFYIKVSDSSHSIYVTLPSDQHDFVLSNKMQLGQFIYVDRLEPGSPVPVLRGAKPLPGRHPFIGTPEPLMGLREKTQTQAQAQTCKPSSVRGSWGTGRKKKNDDDGDGGDFFPPLPMIFKPVNLDFDQCTPIRGRSNGGIGKDGTPVRCSVSGGLFGKMNDAKGESPGGLLRKSCAFGSSNGKITRSRSVSERENRIPASPFKSNEKRGGTPPPRLRHARVTTSVGVIDGVTQKEDSSVTSQHKSQSTTNSAFDDSNNLSLPMNLPARLSSLGKEAVQQREVAQKIALQALRDASATETVVRSLKMFSNLAKSARADAPATCFERFLEFHNDIVQAVSAMMSMQAATSASDLASKSDKQVEEEQPHVLHEVMQNSIDQSGNSTESNVSKRRCVYKGKMGKLLKSSSTNQKEILEKKGSILEPIVENDENKKPVSCSLSNTVKLGKQIETEAGNWFMEFIEKALEAGLKKTKEESKGDVRKVPQSLILKVMNWVEVEQYHSNKRPSHPKAAQIARKLRIKIKNP*