Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0722220 | XP_003613238.1 | 97.043 | 575 | 11 | 3 | 1 | 573 | 1 | 571 | 0.0 | 1138 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0722220 | G7K1E3 | 97.043 | 575 | 11 | 3 | 1 | 573 | 1 | 571 | 0.0 | 1138 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003080 | Msa0722220 | 0.805481 | 1.307654e-49 | -8.615850e-47 |
| Msa0016040 | Msa0722220 | 0.857408 | 1.666094e-62 | -8.615850e-47 |
| Msa0016530 | Msa0722220 | 0.815129 | 1.082944e-51 | -8.615850e-47 |
| Msa0019930 | Msa0722220 | 0.819701 | 1.011618e-52 | -8.615850e-47 |
| Msa0020540 | Msa0722220 | 0.824386 | 8.300326e-54 | -8.615850e-47 |
| Msa0025160 | Msa0722220 | 0.824304 | 8.680253e-54 | -8.615850e-47 |
| Msa0025580 | Msa0722220 | 0.817573 | 3.074895e-52 | -8.615850e-47 |
| Msa0027280 | Msa0722220 | 0.819917 | 9.029456e-53 | -8.615850e-47 |
| Msa0030690 | Msa0722220 | 0.820509 | 6.606309e-53 | -8.615850e-47 |
| Msa0032970 | Msa0722220 | 0.808862 | 2.514530e-50 | -8.615850e-47 |
| Msa0032980 | Msa0722220 | 0.863593 | 2.229157e-64 | -8.615850e-47 |
| Msa0034210 | Msa0722220 | 0.829482 | 5.023417e-55 | -8.615850e-47 |
| Msa0038940 | Msa0722220 | 0.812207 | 4.760824e-51 | -8.615850e-47 |
| Msa0040640 | Msa0722220 | 0.809178 | 2.151739e-50 | -8.615850e-47 |
| Msa0042640 | Msa0722220 | 0.803747 | 3.007625e-49 | -8.615850e-47 |
| Msa0046370 | Msa0722220 | 0.830268 | 3.232234e-55 | -8.615850e-47 |
| Msa0048510 | Msa0722220 | 0.850713 | 1.421149e-60 | -8.615850e-47 |
| Msa0050660 | Msa0722220 | 0.844817 | 5.975731e-59 | -8.615850e-47 |
| Msa0050700 | Msa0722220 | 0.843161 | 1.661422e-58 | -8.615850e-47 |
| Msa0050790 | Msa0722220 | 0.830266 | 3.234612e-55 | -8.615850e-47 |
| Msa0053070 | Msa0722220 | 0.820054 | 8.399704e-53 | -8.615850e-47 |
| Msa0062340 | Msa0722220 | 0.849218 | 3.723958e-60 | -8.615850e-47 |
| Msa0067060 | Msa0722220 | 0.815918 | 7.227196e-52 | -8.615850e-47 |
| Msa0068150 | Msa0722220 | 0.822776 | 1.976222e-53 | -8.615850e-47 |
| Msa0072520 | Msa0722220 | 0.817050 | 4.032102e-52 | -8.615850e-47 |
| Msa0074360 | Msa0722220 | 0.827888 | 1.220115e-54 | -8.615850e-47 |
| Msa0075530 | Msa0722220 | 0.816169 | 6.350301e-52 | -8.615850e-47 |
| Msa0077560 | Msa0722220 | 0.824406 | 8.214841e-54 | -8.615850e-47 |
| Msa0078130 | Msa0722220 | 0.838159 | 3.393720e-57 | -8.615850e-47 |
| Msa0091350 | Msa0722220 | 0.858335 | 8.841395e-63 | -8.615850e-47 |
| Msa0091360 | Msa0722220 | 0.813042 | 3.126366e-51 | -8.615850e-47 |
| Msa0093860 | Msa0722220 | 0.836532 | 8.855695e-57 | -8.615850e-47 |
| Msa0094790 | Msa0722220 | 0.826926 | 2.075131e-54 | -8.615850e-47 |
| Msa0098410 | Msa0722220 | 0.810755 | 9.844891e-51 | -8.615850e-47 |
| Msa0106630 | Msa0722220 | 0.815814 | 7.623362e-52 | -8.615850e-47 |
| Msa0112670 | Msa0722220 | 0.811433 | 7.017884e-51 | -8.615850e-47 |
| Msa0115550 | Msa0722220 | 0.828875 | 7.048637e-55 | -8.615850e-47 |
| Msa0606100 | Msa0722220 | 0.853644 | 2.085358e-61 | -8.615850e-47 |
| Msa0607800 | Msa0722220 | 0.869966 | 2.082922e-66 | -8.615850e-47 |
| Msa0608350 | Msa0722220 | 0.823377 | 1.431511e-53 | -8.615850e-47 |
| Msa0613580 | Msa0722220 | 0.841963 | 3.453984e-58 | -8.615850e-47 |
| Msa0613630 | Msa0722220 | 0.855932 | 4.525049e-62 | -8.615850e-47 |
| Msa0615630 | Msa0722220 | 0.814902 | 1.215723e-51 | -8.615850e-47 |
| Msa0620500 | Msa0722220 | 0.843671 | 1.213839e-58 | -8.615850e-47 |
| Msa0621710 | Msa0722220 | 0.886114 | 4.533690e-72 | -8.615850e-47 |
| Msa0622920 | Msa0722220 | 0.848972 | 4.359365e-60 | -8.615850e-47 |
| Msa0630660 | Msa0722220 | 0.802910 | 4.483332e-49 | -8.615850e-47 |
| Msa0647050 | Msa0722220 | 0.837935 | 3.875643e-57 | -8.615850e-47 |
| Msa0647440 | Msa0722220 | 0.804471 | 2.125710e-49 | -8.615850e-47 |
| Msa0648040 | Msa0722220 | 0.856208 | 3.757404e-62 | -8.615850e-47 |
| Msa0648760 | Msa0722220 | 0.816921 | 4.310623e-52 | -8.615850e-47 |
| Msa0654740 | Msa0722220 | 0.808890 | 2.480118e-50 | -8.615850e-47 |
| Msa0657700 | Msa0722220 | 0.829566 | 4.790470e-55 | -8.615850e-47 |
| Msa0658640 | Msa0722220 | 0.820267 | 7.507456e-53 | -8.615850e-47 |
| Msa0666700 | Msa0722220 | 0.855499 | 6.056314e-62 | -8.615850e-47 |
| Msa0668900 | Msa0722220 | 0.844572 | 6.959887e-59 | -8.615850e-47 |
| Msa0682770 | Msa0722220 | 0.829290 | 5.592227e-55 | -8.615850e-47 |
| Msa0687090 | Msa0722220 | 0.843559 | 1.300971e-58 | -8.615850e-47 |
| Msa0690320 | Msa0722220 | 0.803393 | 3.562310e-49 | -8.615850e-47 |
| Msa0690740 | Msa0722220 | 0.854913 | 8.965175e-62 | -8.615850e-47 |
| Msa0691270 | Msa0722220 | 0.837654 | 4.576534e-57 | -8.615850e-47 |
| Msa0698730 | Msa0722220 | 0.838706 | 2.452287e-57 | -8.615850e-47 |
| Msa0700210 | Msa0722220 | 0.800759 | 1.239398e-48 | -8.615850e-47 |
| Msa0702810 | Msa0722220 | 0.815069 | 1.116548e-51 | -8.615850e-47 |
| Msa0703600 | Msa0722220 | 0.832131 | 1.125854e-55 | -8.615850e-47 |
| Msa0709200 | Msa0722220 | 0.831298 | 1.806659e-55 | -8.615850e-47 |
| Msa0709440 | Msa0722220 | 0.869317 | 3.388959e-66 | -8.615850e-47 |
| Msa0709630 | Msa0722220 | 0.807576 | 4.725589e-50 | -8.615850e-47 |
| Msa0713920 | Msa0722220 | 0.828082 | 1.095496e-54 | -8.615850e-47 |
| Msa0713960 | Msa0722220 | 0.808497 | 3.008442e-50 | -8.615850e-47 |
| Msa0714520 | Msa0722220 | 0.883307 | 5.013977e-71 | -8.615850e-47 |
| Msa0714790 | Msa0722220 | 0.837132 | 6.226220e-57 | -8.615850e-47 |
| Msa0716480 | Msa0722220 | 0.813417 | 2.587092e-51 | -8.615850e-47 |
| Msa0716890 | Msa0722220 | 0.800193 | 1.616488e-48 | -8.615850e-47 |
| Msa0717900 | Msa0722220 | 0.834084 | 3.677455e-56 | -8.615850e-47 |
| Msa0722220 | Msa0735780 | 0.862299 | 5.590891e-64 | -8.615850e-47 |
| Msa0722220 | Msa0737990 | 0.858637 | 7.183621e-63 | -8.615850e-47 |
| Msa0722220 | Msa0738700 | 0.817255 | 3.626203e-52 | -8.615850e-47 |
| Msa0722220 | Msa0740710 | 0.819502 | 1.122797e-52 | -8.615850e-47 |
| Msa0722220 | Msa0743440 | 0.876109 | 1.813664e-68 | -8.615850e-47 |
| Msa0722220 | Msa0745720 | 0.852636 | 4.054752e-61 | -8.615850e-47 |
| Msa0722220 | Msa0747740 | 0.831652 | 1.478676e-55 | -8.615850e-47 |
| Msa0722220 | Msa0754430 | 0.805352 | 1.391412e-49 | -8.615850e-47 |
| Msa0722220 | Msa0754450 | 0.821679 | 3.552447e-53 | -8.615850e-47 |
| Msa0722220 | Msa0756820 | 0.834758 | 2.490201e-56 | -8.615850e-47 |
| Msa0722220 | Msa0758650 | 0.857986 | 1.122976e-62 | -8.615850e-47 |
| Msa0722220 | Msa0761670 | 0.826627 | 2.445198e-54 | -8.615850e-47 |
| Msa0722220 | Msa0763550 | 0.885107 | 1.081295e-71 | -8.615850e-47 |
| Msa0722220 | Msa0773630 | 0.846780 | 1.751505e-59 | -8.615850e-47 |
| Msa0722220 | Msa0778550 | 0.820567 | 6.406290e-53 | -8.615850e-47 |
| Msa0722220 | Msa0780910 | 0.846145 | 2.610987e-59 | -8.615850e-47 |
| Msa0722220 | Msa0783930 | 0.839473 | 1.551690e-57 | -8.615850e-47 |
| Msa0722220 | Msa0800660 | 0.823170 | 1.600068e-53 | -8.615850e-47 |
| Msa0722220 | Msa0805680 | 0.912648 | 1.530720e-83 | -8.615850e-47 |
| Msa0722220 | Msa0811020 | 0.850632 | 1.497336e-60 | -8.615850e-47 |
| Msa0722220 | Msa0816080 | 0.827958 | 1.173392e-54 | -8.615850e-47 |
| Msa0722220 | Msa0817360 | 0.824517 | 7.732921e-54 | -8.615850e-47 |
| Msa0722220 | Msa0818150 | 0.808700 | 2.722829e-50 | -8.615850e-47 |
| Msa0722220 | Msa0818880 | 0.837115 | 6.287796e-57 | -8.615850e-47 |
| Msa0722220 | Msa0821160 | 0.850392 | 1.749299e-60 | -8.615850e-47 |
| Msa0722220 | Msa0824450 | 0.835551 | 1.570897e-56 | -8.615850e-47 |
| Msa0722220 | Msa0828970 | 0.818027 | 2.428015e-52 | -8.615850e-47 |
| Msa0722220 | Msa0835350 | 0.835117 | 2.022856e-56 | -8.615850e-47 |
| Msa0722220 | Msa0836150 | 0.812890 | 3.375759e-51 | -8.615850e-47 |
| Msa0722220 | Msa0837460 | 0.825427 | 4.714899e-54 | -8.615850e-47 |
| Msa0722220 | Msa0841590 | 0.805749 | 1.148622e-49 | -8.615850e-47 |
| Msa0722220 | Msa0843050 | 0.870367 | 1.539863e-66 | -8.615850e-47 |
| Msa0722220 | Msa0851300 | 0.803600 | 3.226779e-49 | -8.615850e-47 |
| Msa0722220 | Msa0855230 | 0.810356 | 1.200608e-50 | -8.615850e-47 |
| Msa0722220 | Msa0857890 | 0.845885 | 3.072610e-59 | -8.615850e-47 |
| Msa0722220 | Msa0859290 | 0.811227 | 7.779452e-51 | -8.615850e-47 |
| Msa0722220 | Msa0863620 | 0.878588 | 2.487131e-69 | -8.615850e-47 |
| Msa0722220 | Msa0867110 | 0.853197 | 2.801465e-61 | -8.615850e-47 |
| Msa0722220 | Msa0879920 | 0.863192 | 2.967585e-64 | -8.615850e-47 |
| Msa0722220 | Msa0888790 | 0.849185 | 3.803289e-60 | -8.615850e-47 |
| Msa0722220 | Msa0909760 | 0.823866 | 1.099769e-53 | -8.615850e-47 |
| Msa0722220 | Msa0915520 | 0.846024 | 2.815985e-59 | -8.615850e-47 |
| Msa0722220 | Msa0924430 | 0.853778 | 1.908110e-61 | -8.615850e-47 |
| Msa0722220 | Msa0931590 | 0.889615 | 2.066393e-73 | -8.615850e-47 |
| Msa0722220 | Msa0966320 | 0.828631 | 8.076896e-55 | -8.615850e-47 |
| Msa0722220 | Msa0966480 | 0.833916 | 4.050688e-56 | -8.615850e-47 |
| Msa0722220 | Msa0989370 | 0.853345 | 2.540234e-61 | -8.615850e-47 |
| Msa0722220 | Msa0997920 | 0.802647 | 5.079519e-49 | -8.615850e-47 |
| Msa0722220 | Msa1002640 | 0.821350 | 4.230980e-53 | -8.615850e-47 |
| Msa0722220 | Msa1008670 | 0.812710 | 3.697607e-51 | -8.615850e-47 |
| Msa0722220 | Msa1033920 | 0.813244 | 2.823140e-51 | -8.615850e-47 |
| Msa0722220 | Msa1035220 | 0.812757 | 3.611086e-51 | -8.615850e-47 |
| Msa0722220 | Msa1035570 | 0.867990 | 9.101596e-66 | -8.615850e-47 |
| Msa0722220 | Msa1035610 | 0.873387 | 1.529244e-67 | -8.615850e-47 |
| Msa0722220 | Msa1035650 | 0.847201 | 1.343114e-59 | -8.615850e-47 |
| Msa0722220 | Msa1037540 | 0.828031 | 1.126677e-54 | -8.615850e-47 |
| Msa0722220 | Msa1042160 | 0.802289 | 6.020211e-49 | -8.615850e-47 |
| Msa0722220 | Msa1042190 | 0.808202 | 3.477245e-50 | -8.615850e-47 |
| Msa0722220 | Msa1042880 | 0.840390 | 8.949962e-58 | -8.615850e-47 |
| Msa0722220 | Msa1056830 | 0.805102 | 1.569661e-49 | -8.615850e-47 |
| Msa0722220 | Msa1059020 | 0.879939 | 8.272917e-70 | -8.615850e-47 |
| Msa0722220 | Msa1060900 | 0.816699 | 4.834023e-52 | -8.615850e-47 |
| Msa0722220 | Msa1076020 | 0.810932 | 9.011189e-51 | -8.615850e-47 |
| Msa0722220 | Msa1078880 | 0.835972 | 1.228971e-56 | -8.615850e-47 |
| Msa0722220 | Msa1078970 | 0.824934 | 6.168666e-54 | -8.615850e-47 |
| Msa0722220 | Msa1081390 | 0.848443 | 6.109915e-60 | -8.615850e-47 |
| Msa0722220 | Msa1082200 | 0.855312 | 6.862734e-62 | -8.615850e-47 |
| Msa0722220 | Msa1082380 | 0.828609 | 8.175437e-55 | -8.615850e-47 |
| Msa0722220 | Msa1084530 | 0.875644 | 2.619944e-68 | -8.615850e-47 |
| Msa0722220 | Msa1092420 | 0.836440 | 9.348837e-57 | -8.615850e-47 |
| Msa0722220 | Msa1104220 | 0.858171 | 9.891940e-63 | -8.615850e-47 |
| Msa0722220 | Msa1114630 | 0.835386 | 1.729824e-56 | -8.615850e-47 |
| Msa0722220 | Msa1116190 | 0.859798 | 3.224361e-63 | -8.615850e-47 |
| Msa0722220 | Msa1116220 | 0.843597 | 1.270455e-58 | -8.615850e-47 |
| Msa0722220 | Msa1116660 | 0.840214 | 9.949762e-58 | -8.615850e-47 |
| Msa0722220 | Msa1116740 | 0.835592 | 1.534435e-56 | -8.615850e-47 |
| Msa0722220 | Msa1123210 | 0.818431 | 1.967034e-52 | -8.615850e-47 |
| Msa0722220 | Msa1125820 | 0.876387 | 1.454472e-68 | -8.615850e-47 |
| Msa0722220 | Msa1125990 | 0.871036 | 9.274515e-67 | -8.615850e-47 |
| Msa0722220 | Msa1127280 | 0.826975 | 2.019722e-54 | -8.615850e-47 |
| Msa0722220 | Msa1127470 | 0.845753 | 3.335843e-59 | -8.615850e-47 |
| Msa0722220 | Msa1130420 | 0.804274 | 2.337460e-49 | -8.615850e-47 |
| Msa0722220 | Msa1132530 | 0.843385 | 1.447423e-58 | -8.615850e-47 |
| Msa0722220 | Msa1139050 | 0.834569 | 2.778377e-56 | -8.615850e-47 |
| Msa0722220 | Msa1147910 | 0.821296 | 4.354110e-53 | -8.615850e-47 |
| Msa0722220 | Msa1148630 | 0.817783 | 2.756728e-52 | -8.615850e-47 |
| Msa0722220 | Msa1149450 | 0.815058 | 1.123131e-51 | -8.615850e-47 |
| Msa0722220 | Msa1159590 | 0.853347 | 2.538099e-61 | -8.615850e-47 |
| Msa0722220 | Msa1162180 | 0.854840 | 9.411116e-62 | -8.615850e-47 |
| Msa0722220 | Msa1162880 | 0.833104 | 6.458664e-56 | -8.615850e-47 |
| Msa0722220 | Msa1165480 | 0.826872 | 2.137701e-54 | -8.615850e-47 |
| Msa0722220 | Msa1167470 | 0.809321 | 2.004915e-50 | -8.615850e-47 |
| Msa0722220 | Msa1169190 | 0.829177 | 5.955850e-55 | -8.615850e-47 |
| Msa0722220 | Msa1171070 | 0.807977 | 3.882600e-50 | -8.615850e-47 |
| Msa0722220 | Msa1171290 | 0.862161 | 6.162402e-64 | -8.615850e-47 |
| Msa0722220 | Msa1190390 | 0.830225 | 3.310336e-55 | -8.615850e-47 |
| Msa0722220 | Msa1192560 | 0.820714 | 5.928949e-53 | -8.615850e-47 |
| Msa0722220 | Msa1192570 | 0.821733 | 3.450774e-53 | -8.615850e-47 |
| Msa0722220 | Msa1192590 | 0.818519 | 1.878948e-52 | -8.615850e-47 |
| Msa0722220 | Msa1201540 | 0.841453 | 4.707673e-58 | -8.615850e-47 |
| Msa0722220 | Msa1201780 | 0.825904 | 3.633881e-54 | -8.615850e-47 |
| Msa0722220 | Msa1208950 | 0.809878 | 1.522155e-50 | -8.615850e-47 |
| Msa0722220 | Msa1211640 | 0.803984 | 2.685554e-49 | -8.615850e-47 |
| Msa0722220 | Msa1213830 | 0.865728 | 4.785524e-65 | -8.615850e-47 |
| Msa0722220 | Msa1214350 | 0.892948 | 9.905244e-75 | -8.615850e-47 |
| Msa0722220 | Msa1215870 | 0.840114 | 1.056581e-57 | -8.615850e-47 |
| Msa0722220 | Msa1215980 | 0.843584 | 1.281175e-58 | -8.615850e-47 |
| Msa0722220 | Msa1218820 | 0.854639 | 1.076402e-61 | -8.615850e-47 |
| Msa0722220 | Msa1220170 | 0.822886 | 1.863758e-53 | -8.615850e-47 |
| Msa0722220 | Msa1223390 | 0.834799 | 2.432671e-56 | -8.615850e-47 |
| Msa0722220 | Msa1226520 | 0.825777 | 3.895890e-54 | -8.615850e-47 |
| Msa0722220 | Msa1244240 | 0.843827 | 1.102963e-58 | -8.615850e-47 |
| Msa0722220 | Msa1252790 | 0.825802 | 3.842883e-54 | -8.615850e-47 |
| Msa0722220 | Msa1254420 | 0.812176 | 4.835634e-51 | -8.615850e-47 |
| Msa0722220 | Msa1254540 | 0.885611 | 7.005776e-72 | -8.615850e-47 |
| Msa0722220 | Msa1260710 | 0.830560 | 2.741518e-55 | -8.615850e-47 |
| Msa0722220 | Msa1261050 | 0.888110 | 7.889999e-73 | -8.615850e-47 |
| Msa0722220 | Msa1263740 | 0.879486 | 1.198460e-69 | -8.615850e-47 |
| Msa0722220 | Msa1263780 | 0.884117 | 2.521574e-71 | -8.615850e-47 |
| Msa0722220 | Msa1263900 | 0.815886 | 7.344643e-52 | -8.615850e-47 |
| Msa0722220 | Msa1268540 | 0.813501 | 2.479252e-51 | -8.615850e-47 |
| Msa0722220 | Msa1268630 | 0.825297 | 5.062924e-54 | -8.615850e-47 |
| Msa0722220 | Msa1279120 | 0.820887 | 5.407903e-53 | -8.615850e-47 |
| Msa0722220 | Msa1294460 | 0.876652 | 1.177597e-68 | -8.615850e-47 |
| Msa0722220 | Msa1294790 | 0.832767 | 7.835158e-56 | -8.615850e-47 |
| Msa0722220 | Msa1300460 | 0.872772 | 2.459609e-67 | -8.615850e-47 |
| Msa0722220 | Msa1301700 | 0.828866 | 7.086065e-55 | -8.615850e-47 |
| Msa0722220 | Msa1301820 | 0.810752 | 9.860051e-51 | -8.615850e-47 |
| Msa0722220 | Msa1305780 | 0.809607 | 1.740077e-50 | -8.615850e-47 |
| Msa0722220 | Msa1305920 | 0.833641 | 4.744716e-56 | -8.615850e-47 |
| Msa0722220 | Msa1306790 | 0.849714 | 2.708890e-60 | -8.615850e-47 |
| Msa0722220 | Msa1315160 | 0.810099 | 1.364202e-50 | -8.615850e-47 |
| Msa0722220 | Msa1321530 | 0.816170 | 6.348139e-52 | -8.615850e-47 |
| Msa0722220 | Msa1332950 | 0.873894 | 1.031833e-67 | -8.615850e-47 |
| Msa0722220 | Msa1338210 | 0.851787 | 7.069238e-61 | -8.615850e-47 |
| Msa0722220 | Msa1339170 | 0.846743 | 1.792421e-59 | -8.615850e-47 |
| Msa0722220 | Msa1342810 | 0.816288 | 5.974177e-52 | -8.615850e-47 |
| Msa0722220 | Msa1343170 | 0.835219 | 1.905799e-56 | -8.615850e-47 |
| Msa0722220 | Msa1343180 | 0.836061 | 1.167039e-56 | -8.615850e-47 |
| Msa0722220 | Msa1359980 | 0.838935 | 2.139912e-57 | -8.615850e-47 |
| Msa0722220 | Msa1361930 | 0.810077 | 1.379311e-50 | -8.615850e-47 |
| Msa0722220 | Msa1362130 | 0.848483 | 5.955022e-60 | -8.615850e-47 |
| Msa0722220 | Msa1364040 | 0.823174 | 1.596619e-53 | -8.615850e-47 |
| Msa0722220 | Msa1364410 | 0.862787 | 3.955442e-64 | -8.615850e-47 |
| Msa0722220 | Msa1364680 | 0.816554 | 5.207925e-52 | -8.615850e-47 |
| Msa0722220 | Msa1365500 | 0.839254 | 1.768473e-57 | -8.615850e-47 |
| Msa0722220 | Msa1366150 | 0.814943 | 1.190700e-51 | -8.615850e-47 |
| Msa0722220 | Msa1367180 | 0.814755 | 1.310760e-51 | -8.615850e-47 |
| Msa0722220 | Msa1368750 | 0.869229 | 3.621283e-66 | -8.615850e-47 |
| Msa0722220 | Msa1374790 | 0.872223 | 3.749446e-67 | -8.615850e-47 |
| Msa0722220 | Msa1380120 | 0.836566 | 8.683411e-57 | -8.615850e-47 |
| Msa0722220 | Msa1381180 | 0.808160 | 3.550344e-50 | -8.615850e-47 |
| Msa0722220 | Msa1381470 | 0.843895 | 1.057278e-58 | -8.615850e-47 |
| Msa0722220 | Msa1383310 | 0.800770 | 1.233447e-48 | -8.615850e-47 |
| Msa0722220 | Msa1384150 | 0.860559 | 1.898977e-63 | -8.615850e-47 |
| Msa0722220 | Msa1387440 | 0.844860 | 5.820435e-59 | -8.615850e-47 |
| Msa0722220 | Msa1387500 | 0.802988 | 4.320127e-49 | -8.615850e-47 |
| Msa0722220 | Msa1400010 | 0.830627 | 2.639574e-55 | -8.615850e-47 |
| Msa0722220 | Msa1406720 | 0.845998 | 2.862803e-59 | -8.615850e-47 |
| Msa0722220 | Msa1409410 | 0.833521 | 5.085351e-56 | -8.615850e-47 |
| Msa0722220 | Msa1415540 | 0.823136 | 1.629106e-53 | -8.615850e-47 |
| Msa0722220 | Msa1417060 | 0.802948 | 4.402722e-49 | -8.615850e-47 |
| Msa0722220 | Msa1429070 | 0.820888 | 5.406540e-53 | -8.615850e-47 |
| Msa0722220 | Msa1433860 | 0.807821 | 4.192241e-50 | -8.615850e-47 |
| Msa0722220 | Msa1434640 | 0.816914 | 4.324585e-52 | -8.615850e-47 |
| Msa0722220 | Msa1437930 | 0.816773 | 4.653063e-52 | -8.615850e-47 |
| Msa0722220 | Msa1440630 | 0.830382 | 3.029972e-55 | -8.615850e-47 |
| Msa0722220 | Msa1442260 | 0.800740 | 1.250822e-48 | -8.615850e-47 |
| Msa0722220 | Msa1445120 | 0.828504 | 8.668169e-55 | -8.615850e-47 |
| Msa0722220 | Msa1446100 | 0.818375 | 2.025906e-52 | -8.615850e-47 |
| Msa0722220 | Msa1450190 | 0.875386 | 3.210065e-68 | -8.615850e-47 |
| Msa0722220 | Msa1451820 | 0.875009 | 4.316466e-68 | -8.615850e-47 |
| Msa0722220 | Msa1452140 | 0.827991 | 1.151984e-54 | -8.615850e-47 |
| Msa0722220 | Msa1454010 | 0.807740 | 4.361872e-50 | -8.615850e-47 |
| Msa0722220 | Msa1457840 | 0.828206 | 1.022697e-54 | -8.615850e-47 |
| Msa0722220 | Msa1465360 | 0.817765 | 2.782912e-52 | -8.615850e-47 |
| Msa0121330 | Msa0722220 | 0.828533 | 8.525532e-55 | -8.615850e-47 |
| Msa0122330 | Msa0722220 | 0.864798 | 9.383601e-65 | -8.615850e-47 |
| Msa0123070 | Msa0722220 | 0.829887 | 4.003248e-55 | -8.615850e-47 |
| Msa0123320 | Msa0722220 | 0.826653 | 2.410568e-54 | -8.615850e-47 |
| Msa0127340 | Msa0722220 | 0.822737 | 2.018761e-53 | -8.615850e-47 |
| Msa0127680 | Msa0722220 | 0.801875 | 7.323692e-49 | -8.615850e-47 |
| Msa0128310 | Msa0722220 | 0.830517 | 2.808640e-55 | -8.615850e-47 |
| Msa0140280 | Msa0722220 | 0.829037 | 6.441075e-55 | -8.615850e-47 |
| Msa0140380 | Msa0722220 | 0.868604 | 5.771458e-66 | -8.615850e-47 |
| Msa0143670 | Msa0722220 | 0.802274 | 6.062870e-49 | -8.615850e-47 |
| Msa0146650 | Msa0722220 | 0.806007 | 1.013615e-49 | -8.615850e-47 |
| Msa0153210 | Msa0722220 | 0.827171 | 1.813138e-54 | -8.615850e-47 |
| Msa0159590 | Msa0722220 | 0.842116 | 3.147108e-58 | -8.615850e-47 |
| Msa0159620 | Msa0722220 | 0.824167 | 9.348488e-54 | -8.615850e-47 |
| Msa0160160 | Msa0722220 | 0.806279 | 8.884951e-50 | -8.615850e-47 |
| Msa0160170 | Msa0722220 | 0.803057 | 4.179860e-49 | -8.615850e-47 |
| Msa0161930 | Msa0722220 | 0.805448 | 1.328255e-49 | -8.615850e-47 |
| Msa0165830 | Msa0722220 | 0.858551 | 7.622020e-63 | -8.615850e-47 |
| Msa0166170 | Msa0722220 | 0.823704 | 1.200115e-53 | -8.615850e-47 |
| Msa0168050 | Msa0722220 | 0.809986 | 1.442574e-50 | -8.615850e-47 |
| Msa0174440 | Msa0722220 | 0.833494 | 5.163634e-56 | -8.615850e-47 |
| Msa0181650 | Msa0722220 | 0.804854 | 1.768687e-49 | -8.615850e-47 |
| Msa0190570 | Msa0722220 | 0.832430 | 9.496692e-56 | -8.615850e-47 |
| Msa0190730 | Msa0722220 | 0.830463 | 2.896342e-55 | -8.615850e-47 |
| Msa0200050 | Msa0722220 | 0.868153 | 8.066613e-66 | -8.615850e-47 |
| Msa0209980 | Msa0722220 | 0.809084 | 2.253195e-50 | -8.615850e-47 |
| Msa0213030 | Msa0722220 | 0.822639 | 2.127305e-53 | -8.615850e-47 |
| Msa0230800 | Msa0722220 | 0.800113 | 1.678037e-48 | -8.615850e-47 |
| Msa0232760 | Msa0722220 | 0.882690 | 8.429021e-71 | -8.615850e-47 |
| Msa0233020 | Msa0722220 | 0.835018 | 2.141509e-56 | -8.615850e-47 |
| Msa0233070 | Msa0722220 | 0.804203 | 2.417671e-49 | -8.615850e-47 |
| Msa0367150 | Msa0722220 | 0.806384 | 8.442362e-50 | -8.615850e-47 |
| Msa0367520 | Msa0722220 | 0.853196 | 2.803815e-61 | -8.615850e-47 |
| Msa0368860 | Msa0722220 | 0.865034 | 7.911741e-65 | -8.615850e-47 |
| Msa0373170 | Msa0722220 | 0.821660 | 3.587843e-53 | -8.615850e-47 |
| Msa0373500 | Msa0722220 | 0.851696 | 7.500410e-61 | -8.615850e-47 |
| Msa0373590 | Msa0722220 | 0.829220 | 5.813512e-55 | -8.615850e-47 |
| Msa0377710 | Msa0722220 | 0.803100 | 4.095162e-49 | -8.615850e-47 |
| Msa0380670 | Msa0722220 | 0.836500 | 9.021972e-57 | -8.615850e-47 |
| Msa0383000 | Msa0722220 | 0.877310 | 6.962126e-69 | -8.615850e-47 |
| Msa0400000 | Msa0722220 | 0.849991 | 2.265740e-60 | -8.615850e-47 |
| Msa0400950 | Msa0722220 | 0.813866 | 2.060458e-51 | -8.615850e-47 |
| Msa0405620 | Msa0722220 | 0.818190 | 2.230611e-52 | -8.615850e-47 |
| Msa0415140 | Msa0722220 | 0.806695 | 7.260318e-50 | -8.615850e-47 |
| Msa0416160 | Msa0722220 | 0.854903 | 9.024654e-62 | -8.615850e-47 |
| Msa0420670 | Msa0722220 | 0.807815 | 4.203977e-50 | -8.615850e-47 |
| Msa0421130 | Msa0722220 | 0.813455 | 2.537503e-51 | -8.615850e-47 |
| Msa0421150 | Msa0722220 | 0.805093 | 1.576606e-49 | -8.615850e-47 |
| Msa0421750 | Msa0722220 | 0.827034 | 1.954634e-54 | -8.615850e-47 |
| Msa0430300 | Msa0722220 | 0.828995 | 6.594428e-55 | -8.615850e-47 |
| Msa0430480 | Msa0722220 | 0.811746 | 5.999972e-51 | -8.615850e-47 |
| Msa0432010 | Msa0722220 | 0.868867 | 4.745204e-66 | -8.615850e-47 |
| Msa0433150 | Msa0722220 | 0.873231 | 1.725414e-67 | -8.615850e-47 |
| Msa0433760 | Msa0722220 | 0.838943 | 2.129039e-57 | -8.615850e-47 |
| Msa0436330 | Msa0722220 | 0.819221 | 1.301283e-52 | -8.615850e-47 |
| Msa0443410 | Msa0722220 | 0.825707 | 4.047705e-54 | -8.615850e-47 |
| Msa0447130 | Msa0722220 | 0.825784 | 3.881839e-54 | -8.615850e-47 |
| Msa0447750 | Msa0722220 | 0.833352 | 5.603327e-56 | -8.615850e-47 |
| Msa0462780 | Msa0722220 | 0.851089 | 1.113735e-60 | -8.615850e-47 |
| Msa0466520 | Msa0722220 | 0.845789 | 3.262581e-59 | -8.615850e-47 |
| Msa0466880 | Msa0722220 | 0.814160 | 1.774638e-51 | -8.615850e-47 |
| Msa0467690 | Msa0722220 | 0.821026 | 5.024870e-53 | -8.615850e-47 |
| Msa0468620 | Msa0722220 | 0.823721 | 1.189058e-53 | -8.615850e-47 |
| Msa0468700 | Msa0722220 | 0.800402 | 1.465701e-48 | -8.615850e-47 |
| Msa0477630 | Msa0722220 | 0.835955 | 1.241184e-56 | -8.615850e-47 |
| Msa0480730 | Msa0722220 | 0.833314 | 5.725648e-56 | -8.615850e-47 |
| Msa0481890 | Msa0722220 | 0.867498 | 1.309141e-65 | -8.615850e-47 |
| Msa0242590 | Msa0722220 | 0.827252 | 1.733678e-54 | -8.615850e-47 |
| Msa0269210 | Msa0722220 | 0.807288 | 5.439901e-50 | -8.615850e-47 |
| Msa0272260 | Msa0722220 | 0.847812 | 9.124592e-60 | -8.615850e-47 |
| Msa0279180 | Msa0722220 | 0.815361 | 9.614266e-52 | -8.615850e-47 |
| Msa0280790 | Msa0722220 | 0.848299 | 6.697711e-60 | -8.615850e-47 |
| Msa0298470 | Msa0722220 | 0.806756 | 7.047380e-50 | -8.615850e-47 |
| Msa0337480 | Msa0722220 | 0.804320 | 2.285893e-49 | -8.615850e-47 |
| Msa0341680 | Msa0722220 | 0.814961 | 1.179702e-51 | -8.615850e-47 |
| Msa0343010 | Msa0722220 | 0.835669 | 1.466558e-56 | -8.615850e-47 |
| Msa0353950 | Msa0722220 | 0.817110 | 3.908648e-52 | -8.615850e-47 |
| Msa0502510 | Msa0722220 | 0.801920 | 7.168801e-49 | -8.615850e-47 |
| Msa0512530 | Msa0722220 | 0.801203 | 1.006101e-48 | -8.615850e-47 |
| Msa0513080 | Msa0722220 | 0.839189 | 1.838570e-57 | -8.615850e-47 |
| Msa0513560 | Msa0722220 | 0.823793 | 1.143742e-53 | -8.615850e-47 |
| Msa0514020 | Msa0722220 | 0.822111 | 2.820976e-53 | -8.615850e-47 |
| Msa0514500 | Msa0722220 | 0.824271 | 8.833025e-54 | -8.615850e-47 |
| Msa0514580 | Msa0722220 | 0.808439 | 3.095678e-50 | -8.615850e-47 |
| Msa0520870 | Msa0722220 | 0.860596 | 1.850341e-63 | -8.615850e-47 |
| Msa0521680 | Msa0722220 | 0.855611 | 5.615369e-62 | -8.615850e-47 |
| Msa0522760 | Msa0722220 | 0.801970 | 7.001354e-49 | -8.615850e-47 |
| Msa0524320 | Msa0722220 | 0.802089 | 6.620498e-49 | -8.615850e-47 |
| Msa0524430 | Msa0722220 | 0.801213 | 1.001075e-48 | -8.615850e-47 |
| Msa0524520 | Msa0722220 | 0.847454 | 1.144733e-59 | -8.615850e-47 |
| Msa0528570 | Msa0722220 | 0.820462 | 6.773750e-53 | -8.615850e-47 |
| Msa0529030 | Msa0722220 | 0.800603 | 1.333660e-48 | -8.615850e-47 |
| Msa0531960 | Msa0722220 | 0.861925 | 7.280205e-64 | -8.615850e-47 |
| Msa0534100 | Msa0722220 | 0.834250 | 3.341313e-56 | -8.615850e-47 |
| Msa0541300 | Msa0722220 | 0.803715 | 3.053695e-49 | -8.615850e-47 |
| Msa0541310 | Msa0722220 | 0.803166 | 3.968085e-49 | -8.615850e-47 |
| Msa0550590 | Msa0722220 | 0.809071 | 2.267783e-50 | -8.615850e-47 |
| Msa0553750 | Msa0722220 | 0.828288 | 9.770481e-55 | -8.615850e-47 |
| Msa0554300 | Msa0722220 | 0.817758 | 2.792946e-52 | -8.615850e-47 |
| Msa0559100 | Msa0722220 | 0.838164 | 3.383295e-57 | -8.615850e-47 |
| Msa0561560 | Msa0722220 | 0.827187 | 1.797235e-54 | -8.615850e-47 |
| Msa0563740 | Msa0722220 | 0.836428 | 9.412218e-57 | -8.615850e-47 |
| Msa0563900 | Msa0722220 | 0.823361 | 1.443609e-53 | -8.615850e-47 |
| Msa0563980 | Msa0722220 | 0.807099 | 5.963423e-50 | -8.615850e-47 |
| Msa0567170 | Msa0722220 | 0.836851 | 7.344083e-57 | -8.615850e-47 |
| Msa0569090 | Msa0722220 | 0.800282 | 1.550651e-48 | -8.615850e-47 |
| Msa0569530 | Msa0722220 | 0.800798 | 1.217100e-48 | -8.615850e-47 |
| Msa0571620 | Msa0722220 | 0.812050 | 5.151776e-51 | -8.615850e-47 |
| Msa0577280 | Msa0722220 | 0.850737 | 1.399505e-60 | -8.615850e-47 |
| Msa0577330 | Msa0722220 | 0.850978 | 1.196901e-60 | -8.615850e-47 |
| Msa0577450 | Msa0722220 | 0.828863 | 7.097318e-55 | -8.615850e-47 |
| Msa0577820 | Msa0722220 | 0.836054 | 1.171817e-56 | -8.615850e-47 |
| Msa0580200 | Msa0722220 | 0.819282 | 1.260614e-52 | -8.615850e-47 |
| Msa0580810 | Msa0722220 | 0.821231 | 4.506497e-53 | -8.615850e-47 |
| Msa0581840 | Msa0722220 | 0.818522 | 1.876226e-52 | -8.615850e-47 |
| Msa0588920 | Msa0722220 | 0.848697 | 5.196105e-60 | -8.615850e-47 |
| Msa0590200 | Msa0722220 | 0.846755 | 1.779716e-59 | -8.615850e-47 |
| Msa0593400 | Msa0722220 | 0.818012 | 2.446754e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0722220 | MtrunA17_Chr5g0413621 | 97.043 | 575 | 11 | 3 | 1 | 573 | 1 | 571 | 0.0 | 1138 |
| Msa0722220 | MtrunA17_Chr6g0475401 | 27.422 | 547 | 297 | 17 | 1 | 531 | 1 | 463 | 4.70e-46 | 170 |
| Msa0722220 | MtrunA17_Chr2g0329581 | 61.157 | 121 | 47 | 0 | 1 | 121 | 1 | 121 | 3.29e-44 | 167 |
| Msa0722220 | MtrunA17_Chr4g0033751 | 57.851 | 121 | 50 | 1 | 1 | 121 | 1 | 120 | 6.06e-42 | 160 |
| Msa0722220 | MtrunA17_Chr4g0062781 | 49.587 | 121 | 60 | 1 | 1 | 121 | 1 | 120 | 2.37e-32 | 132 |
| Msa0722220 | MtrunA17_Chr2g0309091 | 40.650 | 123 | 66 | 3 | 1 | 121 | 1 | 118 | 5.21e-20 | 94.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0722220 | AT1G23790.1 | 51.003 | 598 | 188 | 17 | 1 | 573 | 1 | 518 | 0.0 | 530 |
| Msa0722220 | AT1G70340.1 | 48.409 | 597 | 197 | 19 | 1 | 573 | 1 | 510 | 9.68e-166 | 481 |
| Msa0722220 | AT3G14170.2 | 29.588 | 534 | 276 | 19 | 1 | 529 | 1 | 439 | 1.58e-47 | 174 |
| Msa0722220 | AT3G14170.1 | 29.588 | 534 | 275 | 20 | 1 | 529 | 1 | 438 | 3.69e-47 | 172 |
| Msa0722220 | AT1G08760.1 | 60.331 | 121 | 47 | 1 | 1 | 121 | 1 | 120 | 1.79e-42 | 163 |
| Msa0722220 | AT1G08760.1 | 23.849 | 239 | 143 | 5 | 314 | 515 | 419 | 655 | 2.75e-11 | 67.0 |
| Msa0722220 | AT4G13370.1 | 43.455 | 191 | 93 | 5 | 1 | 183 | 1 | 184 | 5.84e-39 | 152 |
| Msa0722220 | AT3G19610.1 | 43.802 | 121 | 66 | 2 | 1 | 120 | 29 | 148 | 5.32e-27 | 116 |
| Msa0722220 | AT2G31920.1 | 42.520 | 127 | 63 | 4 | 1 | 119 | 1 | 125 | 7.49e-21 | 97.1 |
Find 139 sgRNAs with CRISPR-Local
Find 224 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTACCTACATTTGACTTAAA+TGG | 0.144925 | 5_1:-19429639 | None:intergenic |
| TACAAATCAAAAGGAGATTT+TGG | 0.152041 | 5_1:+19431325 | Msa0722220:CDS |
| TGGTACACCTGAACCTTTAA+TGG | 0.164535 | 5_1:+19429227 | Msa0722220:CDS |
| TTTGAGCCTGGGCCTGGGTC+TGG | 0.171420 | 5_1:-19429266 | None:intergenic |
| GTTCACCTGTTCCGGTTCTT+AGG | 0.175550 | 5_1:+19429169 | Msa0722220:CDS |
| TACATGTTTGAGCCTGGGCC+TGG | 0.220419 | 5_1:-19429272 | None:intergenic |
| AGAAGCTGGGAATTGGTTTA+TGG | 0.224742 | 5_1:+19431454 | Msa0722220:CDS |
| TTGAGAGTGTGTATTGTATT+TGG | 0.238482 | 5_1:+19431711 | Msa0722220:three_prime_UTR |
| GGGAGGAGCAATGGTGGAAT+TGG | 0.257943 | 5_1:+19429438 | Msa0722220:CDS |
| CCAGTTCTGTTAGAGGTTCT+TGG | 0.265426 | 5_1:+19429298 | Msa0722220:CDS |
| CGAGCAATCTGTGCTGCTTT+AGG | 0.274805 | 5_1:-19431626 | None:intergenic |
| CCCAGGGAGCTGAGTCTTGC+TGG | 0.289163 | 5_1:-19430615 | None:intergenic |
| CAGTTCTGTTAGAGGTTCTT+GGG | 0.297458 | 5_1:+19429299 | Msa0722220:CDS |
| CCATTGCTCCTCCCTCTAAT+TGG | 0.307834 | 5_1:-19429429 | None:intergenic |
| CTTAGGAAAAGTTGTGCTTT+TGG | 0.311861 | 5_1:+19429549 | Msa0722220:CDS |
| TTGATGTAAAAGCCTTGTTT+TGG | 0.312605 | 5_1:-19429030 | None:intergenic |
| CTTAGGCCCATTAAAGGTTC+AGG | 0.325269 | 5_1:-19429234 | None:intergenic |
| TTGAGCCTGGGCCTGGGTCT+GGG | 0.329955 | 5_1:-19429265 | None:intergenic |
| AGCTACTTCAGCTTCAGATT+TGG | 0.330327 | 5_1:+19431142 | Msa0722220:CDS |
| TTTGACTTAAATGGACTTGC+AGG | 0.331948 | 5_1:-19429630 | None:intergenic |
| CTGCTTGTACAATATCATTA+TGG | 0.334475 | 5_1:-19431094 | None:intergenic |
| TTCACCTGTTCCGGTTCTTA+GGG | 0.335415 | 5_1:+19429170 | Msa0722220:CDS |
| AGAACCCGGTTCACCTGTTC+CGG | 0.339795 | 5_1:+19429161 | Msa0722220:CDS |
| TGTAAGCCCAGTTCTGTTAG+AGG | 0.342057 | 5_1:+19429291 | Msa0722220:CDS |
| AGAAGGAAGAGTAACGTAAA+TGG | 0.349496 | 5_1:-19429073 | None:intergenic |
| GAATTACGATGCTCGCTTGT+TGG | 0.355819 | 5_1:-19428952 | None:intergenic |
| GGTACACCTGAACCTTTAAT+GGG | 0.362564 | 5_1:+19429228 | Msa0722220:CDS |
| TTGAAACAGAAGCTGGGAAT+TGG | 0.368398 | 5_1:+19431447 | Msa0722220:CDS |
| TTATACTTAAAGTTATGAAC+TGG | 0.369520 | 5_1:+19431561 | Msa0722220:CDS |
| GGCTAGGCCTCTTATTACTA+TGG | 0.370646 | 5_1:-19431601 | None:intergenic |
| GTTAGAGGTTCTTGGGGTAC+AGG | 0.371343 | 5_1:+19429306 | Msa0722220:CDS |
| AACACTCGCACCTGGAATTC+TGG | 0.372129 | 5_1:+19428894 | Msa0722220:CDS |
| GGAGAAGAAAGGTTCTATCT+TGG | 0.374199 | 5_1:+19431346 | Msa0722220:CDS |
| CCTGGTAGACACCCTTTCAT+TGG | 0.380122 | 5_1:+19429207 | Msa0722220:CDS |
| AGAGTTTCCTGATTGGTCTA+TGG | 0.381100 | 5_1:-19431231 | None:intergenic |
| GGAGGAGCAATGGTGGAATT+GGG | 0.384293 | 5_1:+19429439 | Msa0722220:CDS |
| TGGGCTTACATGTTTGAGCC+TGG | 0.389406 | 5_1:-19429278 | None:intergenic |
| ACTTCTGTTGGTGTTATTGA+TGG | 0.396694 | 5_1:+19430486 | Msa0722220:CDS |
| TTGCTTAAGCTGCAAGATAC+TGG | 0.397381 | 5_1:-19431401 | None:intergenic |
| CCAAGAACCTCTAACAGAAC+TGG | 0.404316 | 5_1:-19429298 | None:intergenic |
| ATCATTTGAACAAAGTATCA+AGG | 0.405374 | 5_1:-19431674 | None:intergenic |
| ACATGTTTGAGCCTGGGCCT+GGG | 0.407636 | 5_1:-19429271 | None:intergenic |
| GGAATTCATCGAGAAGGCTT+TGG | 0.409546 | 5_1:+19431475 | Msa0722220:CDS |
| ATCGAGAAGGCTTTGGAAGC+TGG | 0.409777 | 5_1:+19431482 | Msa0722220:CDS |
| GATCAGTGTACACCAATTAG+AGG | 0.412774 | 5_1:+19429417 | Msa0722220:CDS |
| AAGAACCGGAACAGGTGAAC+CGG | 0.417363 | 5_1:-19429166 | None:intergenic |
| AAAACAAAGGAAGAGTCAAA+AGG | 0.421636 | 5_1:+19431512 | Msa0722220:CDS |
| CCACTCACAGAACACCTAAC+AGG | 0.424506 | 5_1:-19429474 | None:intergenic |
| GGAAAGATGGGACACCTGTT+AGG | 0.426168 | 5_1:+19429460 | Msa0722220:CDS |
| GAGTCTTGCTGGTAAATTCA+TGG | 0.427479 | 5_1:-19430604 | None:intergenic |
| TGATCAAAATCCAAATTAAC+CGG | 0.427714 | 5_1:-19429399 | None:intergenic |
| AAAAGAAGGTGTGTTTATAA+AGG | 0.429220 | 5_1:+19431272 | Msa0722220:CDS |
| AAGCATCTCTTAATGCTTGA+AGG | 0.443988 | 5_1:-19430849 | None:intergenic |
| AATGGTGGAATTGGGAAAGA+TGG | 0.455963 | 5_1:+19429447 | Msa0722220:CDS |
| GAAAGGGTGTCTACCAGGTA+AGG | 0.456252 | 5_1:-19429202 | None:intergenic |
| AAACAAAGGAAGAGTCAAAA+GGG | 0.461629 | 5_1:+19431513 | Msa0722220:CDS |
| ATTCAGTAGAGTTTCCTGAT+TGG | 0.466491 | 5_1:-19431238 | None:intergenic |
| CAAAATTCCATAGACCAATC+AGG | 0.466760 | 5_1:+19431224 | Msa0722220:CDS |
| GTCATCAAGTACAAATCAAA+AGG | 0.468971 | 5_1:+19431316 | Msa0722220:CDS |
| GGGCTTACATGTTTGAGCCT+GGG | 0.472081 | 5_1:-19429277 | None:intergenic |
| ATTCTGGTAAAACTCTTAAA+CGG | 0.473300 | 5_1:+19428910 | Msa0722220:CDS |
| CTTAAGCAACACAGTCAAGT+TGG | 0.473573 | 5_1:+19431415 | Msa0722220:CDS |
| CTGAACCTTTAATGGGCCTA+AGG | 0.474948 | 5_1:+19429235 | Msa0722220:CDS |
| TTAGAGGTTCTTGGGGTACA+GGG | 0.475427 | 5_1:+19429307 | Msa0722220:CDS |
| AACAATACCATAGTAATAAG+AGG | 0.475846 | 5_1:+19431594 | Msa0722220:CDS |
| ACCAGCAAGACTCAGCTCCC+TGG | 0.477321 | 5_1:+19430614 | Msa0722220:CDS |
| CCAATGAAAGGGTGTCTACC+AGG | 0.484988 | 5_1:-19429207 | None:intergenic |
| TAAAGTTATGAACTGGGTTG+AGG | 0.488202 | 5_1:+19431568 | Msa0722220:CDS |
| ACTTTAAGTATAAGTGATTG+AGG | 0.490591 | 5_1:-19431551 | None:intergenic |
| GTGTTTCTGAAAGAGAGAAT+AGG | 0.491749 | 5_1:+19429604 | Msa0722220:CDS |
| TCTCAGTAATAAAATGCAGT+TGG | 0.493360 | 5_1:+19429113 | Msa0722220:CDS |
| CTCAGTAATAAAATGCAGTT+GGG | 0.499691 | 5_1:+19429114 | Msa0722220:CDS |
| AAACAGATTGAAACAGAAGC+TGG | 0.500125 | 5_1:+19431440 | Msa0722220:CDS |
| TTAAGCAACACAGTCAAGTT+GGG | 0.500938 | 5_1:+19431416 | Msa0722220:CDS |
| GCACCCCTAAGAACCGGAAC+AGG | 0.501523 | 5_1:-19429174 | None:intergenic |
| ATGCAAAAGGTGAAAGTCCT+GGG | 0.505535 | 5_1:+19429520 | Msa0722220:CDS |
| GTAAATGGAATGCGAAGAAT+CGG | 0.506740 | 5_1:-19429058 | None:intergenic |
| CCAGCAAGACTCAGCTCCCT+GGG | 0.506905 | 5_1:+19430615 | Msa0722220:CDS |
| GTGAAGAAGAAAGAAGAGGT+TGG | 0.514925 | 5_1:-19428793 | None:intergenic |
| TTAGGTGTTCTGTGAGTGGA+GGG | 0.515841 | 5_1:+19429478 | Msa0722220:CDS |
| GGTAAAATGAATGATGCAAA+AGG | 0.520886 | 5_1:+19429507 | Msa0722220:CDS |
| ACAAAATCATGTTGATCAGA+AGG | 0.522160 | 5_1:-19429090 | None:intergenic |
| TGTGCTGCTTTAGGATGGCT+AGG | 0.524805 | 5_1:-19431617 | None:intergenic |
| GGTTTCGCACCCCTAAGAAC+CGG | 0.524925 | 5_1:-19429180 | None:intergenic |
| GGTTCAGGTGTACCAATGAA+AGG | 0.526111 | 5_1:-19429219 | None:intergenic |
| GCATGTCTTAACCGTGGTGG+CGG | 0.526474 | 5_1:-19430453 | None:intergenic |
| TGAACCTTTAATGGGCCTAA+GGG | 0.528581 | 5_1:+19429236 | Msa0722220:CDS |
| ACAATGGCAACACTCGCACC+TGG | 0.529556 | 5_1:+19428886 | Msa0722220:exon |
| GATGCAAAAGGTGAAAGTCC+TGG | 0.530759 | 5_1:+19429519 | Msa0722220:CDS |
| CTAAAGCAGCACAGATTGCT+CGG | 0.535752 | 5_1:+19431627 | Msa0722220:CDS |
| CTTTAAGTATAAGTGATTGA+GGG | 0.548171 | 5_1:-19431550 | None:intergenic |
| AAGACTCAGCTCCCTGGGAA+AGG | 0.549282 | 5_1:+19430620 | Msa0722220:CDS |
| AACCGTTCAAAACATGTAGC+AGG | 0.550629 | 5_1:-19431062 | None:intergenic |
| CCTGTTAGGTGTTCTGTGAG+TGG | 0.551132 | 5_1:+19429474 | Msa0722220:CDS |
| ATGGTGGAATTGGGAAAGAT+GGG | 0.551845 | 5_1:+19429448 | Msa0722220:CDS |
| GTTCAGGTGTACCAATGAAA+GGG | 0.557702 | 5_1:-19429218 | None:intergenic |
| ATCAAAACAATTTCAAACAA+TGG | 0.563558 | 5_1:+19428870 | Msa0722220:exon |
| CCAATTAGAGGGAGGAGCAA+TGG | 0.563791 | 5_1:+19429429 | Msa0722220:CDS |
| AACAGATTGAAACAGAAGCT+GGG | 0.564973 | 5_1:+19431441 | Msa0722220:CDS |
| AGTCTTGCTGGTAAATTCAT+GGG | 0.565122 | 5_1:-19430603 | None:intergenic |
| CAAGAACCTCTAACAGAACT+GGG | 0.565538 | 5_1:-19429297 | None:intergenic |
| TCATTTGAACAAAGTATCAA+GGG | 0.568653 | 5_1:-19431673 | None:intergenic |
| AGTTCTGTTAGAGGTTCTTG+GGG | 0.569485 | 5_1:+19429300 | Msa0722220:CDS |
| CAATCTGTGCTGCTTTAGGA+TGG | 0.570007 | 5_1:-19431622 | None:intergenic |
| GTTAGGTGTTCTGTGAGTGG+AGG | 0.570599 | 5_1:+19429477 | Msa0722220:CDS |
| GAGATCGGCGGGGACGATGT+CGG | 0.571188 | 5_1:-19428989 | None:intergenic |
| AGCATCTCTTAATGCTTGAA+GGG | 0.571799 | 5_1:-19430848 | None:intergenic |
| GTTTATGGAATTCATCGAGA+AGG | 0.578128 | 5_1:+19431469 | Msa0722220:CDS |
| ATCAGTGTACACCAATTAGA+GGG | 0.578815 | 5_1:+19429418 | Msa0722220:CDS |
| AAGAGTCTCTTCCCAAAACA+AGG | 0.582342 | 5_1:+19429018 | Msa0722220:CDS |
| AGGGGTGCGAAACCCTTACC+TGG | 0.585355 | 5_1:+19429189 | Msa0722220:CDS |
| AGAACCGGAACAGGTGAACC+GGG | 0.590619 | 5_1:-19429165 | None:intergenic |
| CTCTTAAACGGTCTAAACAC+CGG | 0.596886 | 5_1:+19428922 | Msa0722220:CDS |
| CTCGCTTGTTGGTTTCACGC+CGG | 0.597156 | 5_1:-19428941 | None:intergenic |
| GAGTGTGAAGAAGAAAGAAG+AGG | 0.597418 | 5_1:-19428797 | None:intergenic |
| AAGAAGAAGAATGATGATGA+TGG | 0.597763 | 5_1:+19429333 | Msa0722220:CDS |
| ATTAGAGGGAGGAGCAATGG+TGG | 0.600477 | 5_1:+19429432 | Msa0722220:CDS |
| TATACTTAAAGTTATGAACT+GGG | 0.600506 | 5_1:+19431562 | Msa0722220:CDS |
| AATGATGATGATGGTGATGG+TGG | 0.604163 | 5_1:+19429342 | Msa0722220:CDS |
| TTGCTGGTAAATTCATGGGT+AGG | 0.606986 | 5_1:-19430599 | None:intergenic |
| AAGAATGATGATGATGGTGA+TGG | 0.608637 | 5_1:+19429339 | Msa0722220:CDS |
| TCACCTGTTCCGGTTCTTAG+GGG | 0.620850 | 5_1:+19429171 | Msa0722220:CDS |
| AGACTGAGATTTATGTTGAG+AGG | 0.635242 | 5_1:-19430538 | None:intergenic |
| GCAAAATAGCAGGAAAAGAG+AGG | 0.637242 | 5_1:+19430423 | Msa0722220:intron |
| GAGGTTCTTGGGGTACAGGG+AGG | 0.639196 | 5_1:+19429310 | Msa0722220:CDS |
| AAAGGGTGTCTACCAGGTAA+GGG | 0.643233 | 5_1:-19429201 | None:intergenic |
| AACAAAGGAAGAGTCAAAAG+GGG | 0.656903 | 5_1:+19431514 | Msa0722220:CDS |
| GCAAGAGTGACGACTTCTGT+TGG | 0.673208 | 5_1:+19430474 | Msa0722220:CDS |
| CTTGCATGTCTTAACCGTGG+TGG | 0.675866 | 5_1:-19430456 | None:intergenic |
| TGCAAAAGGTGAAAGTCCTG+GGG | 0.682008 | 5_1:+19429521 | Msa0722220:CDS |
| AAATAGCAGGAAAAGAGAGG+TGG | 0.685301 | 5_1:+19430426 | Msa0722220:intron |
| TATGTTGATAGATTAGAACC+CGG | 0.693093 | 5_1:+19429147 | Msa0722220:CDS |
| GGATCGAACTACTGTCTCAG+TGG | 0.697237 | 5_1:-19430875 | None:intergenic |
| AGTGTACACCAATTAGAGGG+AGG | 0.703184 | 5_1:+19429421 | Msa0722220:CDS |
| ACTCTTGCATGTCTTAACCG+TGG | 0.707486 | 5_1:-19430459 | None:intergenic |
| GCAAAAGGTGAAAGTCCTGG+GGG | 0.710019 | 5_1:+19429522 | Msa0722220:CDS |
| GAGGTGGTACTCCGCCACCA+CGG | 0.740756 | 5_1:+19430442 | Msa0722220:CDS |
| ATAACCTCGTGTAAAACGTG+TGG | 0.759258 | 5_1:-19431200 | None:intergenic |
| CAAAAGGTGAAAGTCCTGGG+GGG | 0.772252 | 5_1:+19429523 | Msa0722220:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAGGATTTAAATAAAATTCA+GGG | - | chr5_1:19430742-19430761 | None:intergenic | 15.0% |
| !! | AAAGGATTTAAATAAAATTC+AGG | - | chr5_1:19430743-19430762 | None:intergenic | 15.0% |
| !!! | TTTTGGTGTTACTATTTTTA+GGG | - | chr5_1:19428835-19428854 | None:intergenic | 20.0% |
| !!! | TTTTTGGTGTTACTATTTTT+AGG | - | chr5_1:19428836-19428855 | None:intergenic | 20.0% |
| !!! | AATTGTTTTGATGAGATTTT+GGG | - | chr5_1:19428862-19428881 | None:intergenic | 20.0% |
| !!! | AAATTGTTTTGATGAGATTT+TGG | - | chr5_1:19428863-19428882 | None:intergenic | 20.0% |
| !! | ATCAAAACAATTTCAAACAA+TGG | + | chr5_1:19428870-19428889 | Msa0722220:exon | 20.0% |
| !! | ATATTACAATCCTAGATATT+AGG | - | chr5_1:19430333-19430352 | None:intergenic | 20.0% |
| !! | ATTTAAATAAAATTCAGGGA+CGG | - | chr5_1:19430738-19430757 | None:intergenic | 20.0% |
| !! | AATAAGGAATACATACTTAA+GGG | - | chr5_1:19430899-19430918 | None:intergenic | 20.0% |
| !!! | TCCTTATTCAATTCTATTTT+TGG | + | chr5_1:19430911-19430930 | Msa0722220:intron | 20.0% |
| !!! | CCTTATTCAATTCTATTTTT+GGG | + | chr5_1:19430912-19430931 | Msa0722220:intron | 20.0% |
| !!! | CTTATTCAATTCTATTTTTG+GGG | + | chr5_1:19430913-19430932 | Msa0722220:intron | 20.0% |
| !!! | ATCTTTGAACTTTTTCTTTT+AGG | + | chr5_1:19431000-19431019 | Msa0722220:intron | 20.0% |
| !! | TGTGTTTATAAAGGAAAAAT+GGG | + | chr5_1:19431281-19431300 | Msa0722220:CDS | 20.0% |
| !! | TTATACTTAAAGTTATGAAC+TGG | + | chr5_1:19431561-19431580 | Msa0722220:CDS | 20.0% |
| !! | TATACTTAAAGTTATGAACT+GGG | + | chr5_1:19431562-19431581 | Msa0722220:CDS | 20.0% |
| !!! | ATTTTTAGGGTTTTCAAGAA+TGG | - | chr5_1:19428822-19428841 | None:intergenic | 25.0% |
| !!! | ATTGTTTTGATGAGATTTTG+GGG | - | chr5_1:19428861-19428880 | None:intergenic | 25.0% |
| ! | ATTCTGGTAAAACTCTTAAA+CGG | + | chr5_1:19428910-19428929 | Msa0722220:CDS | 25.0% |
| !! | TTAACCGGTTTAAAAATCAT+CGG | - | chr5_1:19429387-19429406 | None:intergenic | 25.0% |
| !! | GATTTTTAAACCGGTTAATT+TGG | + | chr5_1:19429389-19429408 | Msa0722220:CDS | 25.0% |
| ! | TGATCAAAATCCAAATTAAC+CGG | - | chr5_1:19429402-19429421 | None:intergenic | 25.0% |
| !!! | TGATTCTTTCATTTTTTGTG+TGG | + | chr5_1:19429678-19429697 | Msa0722220:intron | 25.0% |
| !!! | AAGCTAGTTTTTTTACAGAA+AGG | + | chr5_1:19429728-19429747 | Msa0722220:intron | 25.0% |
| !! | CCTAAATTACACTCATTTTA+AGG | - | chr5_1:19429776-19429795 | None:intergenic | 25.0% |
| ! | CCTTAAAATGAGTGTAATTT+AGG | + | chr5_1:19429773-19429792 | Msa0722220:intron | 25.0% |
| ! | CGACTAAACGATTATAATTT+AGG | + | chr5_1:19430206-19430225 | Msa0722220:intron | 25.0% |
| ! | CAAACATAACATATCACAAT+TGG | - | chr5_1:19430258-19430277 | None:intergenic | 25.0% |
| !! | CTATTTAAGTCCTAAACTTT+TGG | + | chr5_1:19430687-19430706 | Msa0722220:intron | 25.0% |
| ! | GATTATTATAGACACATCAA+AGG | - | chr5_1:19430761-19430780 | None:intergenic | 25.0% |
| ! | GAATAAGGAATACATACTTA+AGG | - | chr5_1:19430900-19430919 | None:intergenic | 25.0% |
| ! | CCCAAAAATAGAATTGAATA+AGG | - | chr5_1:19430915-19430934 | None:intergenic | 25.0% |
| !! | AAAAGAAGGTGTGTTTATAA+AGG | + | chr5_1:19431272-19431291 | Msa0722220:CDS | 25.0% |
| ! | GTGTGTTTATAAAGGAAAAA+TGG | + | chr5_1:19431280-19431299 | Msa0722220:CDS | 25.0% |
| !! | TACAAATCAAAAGGAGATTT+TGG | + | chr5_1:19431325-19431344 | Msa0722220:CDS | 25.0% |
| !! | TTCTCATCATTTTCAACAAT+TGG | - | chr5_1:19431374-19431393 | None:intergenic | 25.0% |
| ! | CTTTAAGTATAAGTGATTGA+GGG | - | chr5_1:19431553-19431572 | None:intergenic | 25.0% |
| ! | ACTTTAAGTATAAGTGATTG+AGG | - | chr5_1:19431554-19431573 | None:intergenic | 25.0% |
| ! | AACAATACCATAGTAATAAG+AGG | + | chr5_1:19431594-19431613 | Msa0722220:CDS | 25.0% |
| !! | TCATTTGAACAAAGTATCAA+GGG | - | chr5_1:19431676-19431695 | None:intergenic | 25.0% |
| !! | ATCATTTGAACAAAGTATCA+AGG | - | chr5_1:19431677-19431696 | None:intergenic | 25.0% |
| !! | ATGAGATTTTGGGGAATTTT+TGG | - | chr5_1:19428852-19428871 | None:intergenic | 30.0% |
| !!! | TGATGTAAAAGCCTTGTTTT+GGG | - | chr5_1:19429032-19429051 | None:intergenic | 30.0% |
| !!! | TTGATGTAAAAGCCTTGTTT+TGG | - | chr5_1:19429033-19429052 | None:intergenic | 30.0% |
| ACAAAATCATGTTGATCAGA+AGG | - | chr5_1:19429093-19429112 | None:intergenic | 30.0% | |
| TCTCAGTAATAAAATGCAGT+TGG | + | chr5_1:19429113-19429132 | Msa0722220:CDS | 30.0% | |
| CTCAGTAATAAAATGCAGTT+GGG | + | chr5_1:19429114-19429133 | Msa0722220:CDS | 30.0% | |
| ! | TATGTTGATAGATTAGAACC+CGG | + | chr5_1:19429147-19429166 | Msa0722220:CDS | 30.0% |
| ! | AAGAAGAAGAATGATGATGA+TGG | + | chr5_1:19429333-19429352 | Msa0722220:CDS | 30.0% |
| ! | TTTGCCGATGATTTTTAAAC+CGG | + | chr5_1:19429380-19429399 | Msa0722220:CDS | 30.0% |
| GGTAAAATGAATGATGCAAA+AGG | + | chr5_1:19429507-19429526 | Msa0722220:CDS | 30.0% | |
| AGTCCATTTAAGTCAAATGT+AGG | + | chr5_1:19429636-19429655 | Msa0722220:intron | 30.0% | |
| ! | GTACCTACATTTGACTTAAA+TGG | - | chr5_1:19429642-19429661 | None:intergenic | 30.0% |
| GTTATGTTTACGCGAAATTT+AGG | + | chr5_1:19429837-19429856 | Msa0722220:intron | 30.0% | |
| AGTGCAATTGTGATTAGTAT+GGG | + | chr5_1:19430078-19430097 | Msa0722220:intron | 30.0% | |
| GATTGTAACTAATGTCTTTC+CGG | + | chr5_1:19430110-19430129 | Msa0722220:intron | 30.0% | |
| TGCAATTCTTCCTAATATCT+AGG | + | chr5_1:19430320-19430339 | Msa0722220:intron | 30.0% | |
| GATTAATTGTGCAAAATAGC+AGG | + | chr5_1:19430413-19430432 | Msa0722220:intron | 30.0% | |
| AATAAGCTGAGTAAGTTCAA+TGG | - | chr5_1:19430666-19430685 | None:intergenic | 30.0% | |
| CTGCTTGTACAATATCATTA+TGG | - | chr5_1:19431097-19431116 | None:intergenic | 30.0% | |
| AATCAAACGTGTCAAAAAGA+AGG | + | chr5_1:19431258-19431277 | Msa0722220:CDS | 30.0% | |
| GTCATCAAGTACAAATCAAA+AGG | + | chr5_1:19431316-19431335 | Msa0722220:CDS | 30.0% | |
| !! | AGCTGGTTTGAAAAAAACAA+AGG | + | chr5_1:19431499-19431518 | Msa0722220:CDS | 30.0% |
| AAAACAAAGGAAGAGTCAAA+AGG | + | chr5_1:19431512-19431531 | Msa0722220:CDS | 30.0% | |
| AAACAAAGGAAGAGTCAAAA+GGG | + | chr5_1:19431513-19431532 | Msa0722220:CDS | 30.0% | |
| ! | TTGAGAGTGTGTATTGTATT+TGG | + | chr5_1:19431711-19431730 | Msa0722220:three_prime_UTR | 30.0% |
| CAACTATGAAAAACTCAAAG+TGG | - | chr5_1:19431793-19431812 | None:intergenic | 30.0% | |
| ! | AAGAGTTTTACCAGAATTCC+AGG | - | chr5_1:19428907-19428926 | None:intergenic | 35.0% |
| GTAAATGGAATGCGAAGAAT+CGG | - | chr5_1:19429061-19429080 | None:intergenic | 35.0% | |
| AGAAGGAAGAGTAACGTAAA+TGG | - | chr5_1:19429076-19429095 | None:intergenic | 35.0% | |
| !! | AAGAATGATGATGATGGTGA+TGG | + | chr5_1:19429339-19429358 | Msa0722220:CDS | 35.0% |
| TTAAAAATCATCGGCAAAGG+CGG | - | chr5_1:19429378-19429397 | None:intergenic | 35.0% | |
| GGTTTAAAAATCATCGGCAA+AGG | - | chr5_1:19429381-19429400 | None:intergenic | 35.0% | |
| ATCAGTGTACACCAATTAGA+GGG | + | chr5_1:19429418-19429437 | Msa0722220:CDS | 35.0% | |
| ! | CTTAGGAAAAGTTGTGCTTT+TGG | + | chr5_1:19429549-19429568 | Msa0722220:CDS | 35.0% |
| !!! | TGTGCTTTTGGTTCTTCTAA+TGG | + | chr5_1:19429561-19429580 | Msa0722220:CDS | 35.0% |
| !!! | GTGCTTTTGGTTCTTCTAAT+GGG | + | chr5_1:19429562-19429581 | Msa0722220:CDS | 35.0% |
| ! | GTGTTTCTGAAAGAGAGAAT+AGG | + | chr5_1:19429604-19429623 | Msa0722220:CDS | 35.0% |
| ! | TTTGACTTAAATGGACTTGC+AGG | - | chr5_1:19429633-19429652 | None:intergenic | 35.0% |
| CAAGTATAGCTAACATGTGT+CGG | - | chr5_1:19429885-19429904 | None:intergenic | 35.0% | |
| GAGTGCAATTGTGATTAGTA+TGG | + | chr5_1:19430077-19430096 | Msa0722220:intron | 35.0% | |
| !! | AATTACACTCATTTTCAGGC+CGG | - | chr5_1:19430132-19430151 | None:intergenic | 35.0% |
| ! | CCTCAATTACACTCATTTTC+AGG | - | chr5_1:19430136-19430155 | None:intergenic | 35.0% |
| CCTGAAAATGAGTGTAATTG+AGG | + | chr5_1:19430133-19430152 | Msa0722220:intron | 35.0% | |
| !! | ACTTCTGTTGGTGTTATTGA+TGG | + | chr5_1:19430486-19430505 | Msa0722220:CDS | 35.0% |
| TGATGGAGTTACTCAAAAAG+AGG | + | chr5_1:19430503-19430522 | Msa0722220:CDS | 35.0% | |
| AGACTGAGATTTATGTTGAG+AGG | - | chr5_1:19430541-19430560 | None:intergenic | 35.0% | |
| AGTCTTGCTGGTAAATTCAT+GGG | - | chr5_1:19430606-19430625 | None:intergenic | 35.0% | |
| ACAAAAATGTACCTTTCCCA+GGG | - | chr5_1:19430634-19430653 | None:intergenic | 35.0% | |
| AACAAAAATGTACCTTTCCC+AGG | - | chr5_1:19430635-19430654 | None:intergenic | 35.0% | |
| TATCACGCTACCAAAAGTTT+AGG | - | chr5_1:19430700-19430719 | None:intergenic | 35.0% | |
| ! | TGTATTTTGTGTTGCATGAC+AGG | + | chr5_1:19430789-19430808 | Msa0722220:intron | 35.0% |
| AGCATCTCTTAATGCTTGAA+GGG | - | chr5_1:19430851-19430870 | None:intergenic | 35.0% | |
| AAGCATCTCTTAATGCTTGA+AGG | - | chr5_1:19430852-19430871 | None:intergenic | 35.0% | |
| !! | TACATGTTTTGAACGGTTTC+TGG | + | chr5_1:19431067-19431086 | Msa0722220:CDS | 35.0% |
| CAAAATTCCATAGACCAATC+AGG | + | chr5_1:19431224-19431243 | Msa0722220:CDS | 35.0% | |
| ATTCAGTAGAGTTTCCTGAT+TGG | - | chr5_1:19431241-19431260 | None:intergenic | 35.0% | |
| !! | AAGGAGATTTTGGAGAAGAA+AGG | + | chr5_1:19431335-19431354 | Msa0722220:CDS | 35.0% |
| TTAAGCAACACAGTCAAGTT+GGG | + | chr5_1:19431416-19431435 | Msa0722220:CDS | 35.0% | |
| AAACAGATTGAAACAGAAGC+TGG | + | chr5_1:19431440-19431459 | Msa0722220:CDS | 35.0% | |
| AACAGATTGAAACAGAAGCT+GGG | + | chr5_1:19431441-19431460 | Msa0722220:CDS | 35.0% | |
| GTTTATGGAATTCATCGAGA+AGG | + | chr5_1:19431469-19431488 | Msa0722220:CDS | 35.0% | |
| AACAAAGGAAGAGTCAAAAG+GGG | + | chr5_1:19431514-19431533 | Msa0722220:CDS | 35.0% | |
| TAAAGTTATGAACTGGGTTG+AGG | + | chr5_1:19431568-19431587 | Msa0722220:CDS | 35.0% | |
| GTGAAGAAGAAAGAAGAGGT+TGG | - | chr5_1:19428796-19428815 | None:intergenic | 40.0% | |
| GAGTGTGAAGAAGAAAGAAG+AGG | - | chr5_1:19428800-19428819 | None:intergenic | 40.0% | |
| CTCTTAAACGGTCTAAACAC+CGG | + | chr5_1:19428922-19428941 | Msa0722220:CDS | 40.0% | |
| AAGAGTCTCTTCCCAAAACA+AGG | + | chr5_1:19429018-19429037 | Msa0722220:CDS | 40.0% | |
| GTTCAGGTGTACCAATGAAA+GGG | - | chr5_1:19429221-19429240 | None:intergenic | 40.0% | |
| TGGTACACCTGAACCTTTAA+TGG | + | chr5_1:19429227-19429246 | Msa0722220:CDS | 40.0% | |
| GGTACACCTGAACCTTTAAT+GGG | + | chr5_1:19429228-19429247 | Msa0722220:CDS | 40.0% | |
| ! | TGAACCTTTAATGGGCCTAA+GGG | + | chr5_1:19429236-19429255 | Msa0722220:CDS | 40.0% |
| ! | TTTTCCCTTAGGCCCATTAA+AGG | - | chr5_1:19429243-19429262 | None:intergenic | 40.0% |
| CAAGAACCTCTAACAGAACT+GGG | - | chr5_1:19429300-19429319 | None:intergenic | 40.0% | |
| CAGTTCTGTTAGAGGTTCTT+GGG | + | chr5_1:19429299-19429318 | Msa0722220:CDS | 40.0% | |
| AGTTCTGTTAGAGGTTCTTG+GGG | + | chr5_1:19429300-19429319 | Msa0722220:CDS | 40.0% | |
| !! | AATGATGATGATGGTGATGG+TGG | + | chr5_1:19429342-19429361 | Msa0722220:CDS | 40.0% |
| GATCAGTGTACACCAATTAG+AGG | + | chr5_1:19429417-19429436 | Msa0722220:CDS | 40.0% | |
| ! | AATGGTGGAATTGGGAAAGA+TGG | + | chr5_1:19429447-19429466 | Msa0722220:CDS | 40.0% |
| ! | ATGGTGGAATTGGGAAAGAT+GGG | + | chr5_1:19429448-19429467 | Msa0722220:CDS | 40.0% |
| ATGCAAAAGGTGAAAGTCCT+GGG | + | chr5_1:19429520-19429539 | Msa0722220:CDS | 40.0% | |
| AGGCTGCAAAGACATCAAAA+GGG | - | chr5_1:19429756-19429775 | None:intergenic | 40.0% | |
| AAGGCTGCAAAGACATCAAA+AGG | - | chr5_1:19429757-19429776 | None:intergenic | 40.0% | |
| GTGTGACTTGACTGTATTTG+AGG | + | chr5_1:19430277-19430296 | Msa0722220:intron | 40.0% | |
| GCAAAATAGCAGGAAAAGAG+AGG | + | chr5_1:19430423-19430442 | Msa0722220:intron | 40.0% | |
| AAATAGCAGGAAAAGAGAGG+TGG | + | chr5_1:19430426-19430445 | Msa0722220:intron | 40.0% | |
| TTGCTGGTAAATTCATGGGT+AGG | - | chr5_1:19430602-19430621 | None:intergenic | 40.0% | |
| GAGTCTTGCTGGTAAATTCA+TGG | - | chr5_1:19430607-19430626 | None:intergenic | 40.0% | |
| !!! | CTTTTGGTAGCGTGATATCA+CGG | + | chr5_1:19430703-19430722 | Msa0722220:intron | 40.0% |
| AAATTCAGGGACGGCAAATA+TGG | - | chr5_1:19430729-19430748 | None:intergenic | 40.0% | |
| !! | CACCTGCTACATGTTTTGAA+CGG | + | chr5_1:19431060-19431079 | Msa0722220:CDS | 40.0% |
| AACCGTTCAAAACATGTAGC+AGG | - | chr5_1:19431065-19431084 | None:intergenic | 40.0% | |
| AGCTACTTCAGCTTCAGATT+TGG | + | chr5_1:19431142-19431161 | Msa0722220:CDS | 40.0% | |
| ATAACCTCGTGTAAAACGTG+TGG | - | chr5_1:19431203-19431222 | None:intergenic | 40.0% | |
| !! | AGAGTTTCCTGATTGGTCTA+TGG | - | chr5_1:19431234-19431253 | None:intergenic | 40.0% |
| GGAGAAGAAAGGTTCTATCT+TGG | + | chr5_1:19431346-19431365 | Msa0722220:CDS | 40.0% | |
| TTGCTTAAGCTGCAAGATAC+TGG | - | chr5_1:19431404-19431423 | None:intergenic | 40.0% | |
| CTTAAGCAACACAGTCAAGT+TGG | + | chr5_1:19431415-19431434 | Msa0722220:CDS | 40.0% | |
| TTGAAACAGAAGCTGGGAAT+TGG | + | chr5_1:19431447-19431466 | Msa0722220:CDS | 40.0% | |
| ! | AGAAGCTGGGAATTGGTTTA+TGG | + | chr5_1:19431454-19431473 | Msa0722220:CDS | 40.0% |
| GAATTACGATGCTCGCTTGT+TGG | - | chr5_1:19428955-19428974 | None:intergenic | 45.0% | |
| ! | GAGACTCTTTTCGTCGAGAT+CGG | - | chr5_1:19429007-19429026 | None:intergenic | 45.0% |
| TTCACCTGTTCCGGTTCTTA+GGG | + | chr5_1:19429170-19429189 | Msa0722220:CDS | 45.0% | |
| !! | AAAGGGTGTCTACCAGGTAA+GGG | - | chr5_1:19429204-19429223 | None:intergenic | 45.0% |
| GGTTCAGGTGTACCAATGAA+AGG | - | chr5_1:19429222-19429241 | None:intergenic | 45.0% | |
| CTTAGGCCCATTAAAGGTTC+AGG | - | chr5_1:19429237-19429256 | None:intergenic | 45.0% | |
| ! | CTGAACCTTTAATGGGCCTA+AGG | + | chr5_1:19429235-19429254 | Msa0722220:CDS | 45.0% |
| TGTAAGCCCAGTTCTGTTAG+AGG | + | chr5_1:19429291-19429310 | Msa0722220:CDS | 45.0% | |
| CCAAGAACCTCTAACAGAAC+TGG | - | chr5_1:19429301-19429320 | None:intergenic | 45.0% | |
| CCAGTTCTGTTAGAGGTTCT+TGG | + | chr5_1:19429298-19429317 | Msa0722220:CDS | 45.0% | |
| TTAGAGGTTCTTGGGGTACA+GGG | + | chr5_1:19429307-19429326 | Msa0722220:CDS | 45.0% | |
| AGTGTACACCAATTAGAGGG+AGG | + | chr5_1:19429421-19429440 | Msa0722220:CDS | 45.0% | |
| TTAGGTGTTCTGTGAGTGGA+GGG | + | chr5_1:19429478-19429497 | Msa0722220:CDS | 45.0% | |
| GATGCAAAAGGTGAAAGTCC+TGG | + | chr5_1:19429519-19429538 | Msa0722220:CDS | 45.0% | |
| TGCAAAAGGTGAAAGTCCTG+GGG | + | chr5_1:19429521-19429540 | Msa0722220:CDS | 45.0% | |
| ! | TAGCTATACTTGTGTCGACG+TGG | + | chr5_1:19429893-19429912 | Msa0722220:intron | 45.0% |
| GTCATGTTCACGCGAAATTG+AGG | + | chr5_1:19429948-19429967 | Msa0722220:intron | 45.0% | |
| CAGCTACAGCTAACATGTGT+CGG | - | chr5_1:19429996-19430015 | None:intergenic | 45.0% | |
| TGTAGTTTCCGTGTCTGTGT+TGG | + | chr5_1:19430044-19430063 | Msa0722220:intron | 45.0% | |
| CTGAAACACCAACACAGACA+CGG | - | chr5_1:19430055-19430074 | None:intergenic | 45.0% | |
| ACTCTTGCATGTCTTAACCG+TGG | - | chr5_1:19430462-19430481 | None:intergenic | 45.0% | |
| ! | ACAACCACACGTTTTACACG+AGG | + | chr5_1:19431196-19431215 | Msa0722220:CDS | 45.0% |
| GGAATTCATCGAGAAGGCTT+TGG | + | chr5_1:19431475-19431494 | Msa0722220:CDS | 45.0% | |
| GGCTAGGCCTCTTATTACTA+TGG | - | chr5_1:19431604-19431623 | None:intergenic | 45.0% | |
| !! | CAATCTGTGCTGCTTTAGGA+TGG | - | chr5_1:19431625-19431644 | None:intergenic | 45.0% |
| CTAAAGCAGCACAGATTGCT+CGG | + | chr5_1:19431627-19431646 | Msa0722220:CDS | 45.0% | |
| AACACTCGCACCTGGAATTC+TGG | + | chr5_1:19428894-19428913 | Msa0722220:CDS | 50.0% | |
| ! | ACTCTTTTCGTCGAGATCGG+CGG | - | chr5_1:19429004-19429023 | None:intergenic | 50.0% |
| AAGAACCGGAACAGGTGAAC+CGG | - | chr5_1:19429169-19429188 | None:intergenic | 50.0% | |
| GTTCACCTGTTCCGGTTCTT+AGG | + | chr5_1:19429169-19429188 | Msa0722220:CDS | 50.0% | |
| TCACCTGTTCCGGTTCTTAG+GGG | + | chr5_1:19429171-19429190 | Msa0722220:CDS | 50.0% | |
| !! | GAAAGGGTGTCTACCAGGTA+AGG | - | chr5_1:19429205-19429224 | None:intergenic | 50.0% |
| !! | CCAATGAAAGGGTGTCTACC+AGG | - | chr5_1:19429210-19429229 | None:intergenic | 50.0% |
| CCTGGTAGACACCCTTTCAT+TGG | + | chr5_1:19429207-19429226 | Msa0722220:CDS | 50.0% | |
| !!! | GGGTCTGGGTTTTTTCCCTT+AGG | - | chr5_1:19429254-19429273 | None:intergenic | 50.0% |
| AAGGGAAAAAACCCAGACCC+AGG | + | chr5_1:19429254-19429273 | Msa0722220:CDS | 50.0% | |
| GGGCTTACATGTTTGAGCCT+GGG | - | chr5_1:19429280-19429299 | None:intergenic | 50.0% | |
| TGGGCTTACATGTTTGAGCC+TGG | - | chr5_1:19429281-19429300 | None:intergenic | 50.0% | |
| GTTAGAGGTTCTTGGGGTAC+AGG | + | chr5_1:19429306-19429325 | Msa0722220:CDS | 50.0% | |
| CCATTGCTCCTCCCTCTAAT+TGG | - | chr5_1:19429432-19429451 | None:intergenic | 50.0% | |
| CCAATTAGAGGGAGGAGCAA+TGG | + | chr5_1:19429429-19429448 | Msa0722220:CDS | 50.0% | |
| ATTAGAGGGAGGAGCAATGG+TGG | + | chr5_1:19429432-19429451 | Msa0722220:CDS | 50.0% | |
| ! | GGAGGAGCAATGGTGGAATT+GGG | + | chr5_1:19429439-19429458 | Msa0722220:CDS | 50.0% |
| GGAAAGATGGGACACCTGTT+AGG | + | chr5_1:19429460-19429479 | Msa0722220:CDS | 50.0% | |
| CCACTCACAGAACACCTAAC+AGG | - | chr5_1:19429477-19429496 | None:intergenic | 50.0% | |
| CCTGTTAGGTGTTCTGTGAG+TGG | + | chr5_1:19429474-19429493 | Msa0722220:CDS | 50.0% | |
| GTTAGGTGTTCTGTGAGTGG+AGG | + | chr5_1:19429477-19429496 | Msa0722220:CDS | 50.0% | |
| ! | TCTGTGAGTGGAGGGCTTTT+TGG | + | chr5_1:19429486-19429505 | Msa0722220:CDS | 50.0% |
| GCAAAAGGTGAAAGTCCTGG+GGG | + | chr5_1:19429522-19429541 | Msa0722220:CDS | 50.0% | |
| CAAAAGGTGAAAGTCCTGGG+GGG | + | chr5_1:19429523-19429542 | Msa0722220:CDS | 50.0% | |
| CATGTGTCGGAGCTACAAAG+AGG | - | chr5_1:19429872-19429891 | None:intergenic | 50.0% | |
| CTTGCATGTCTTAACCGTGG+TGG | - | chr5_1:19430459-19430478 | None:intergenic | 50.0% | |
| GCAAGAGTGACGACTTCTGT+TGG | + | chr5_1:19430474-19430493 | Msa0722220:CDS | 50.0% | |
| GGATCGAACTACTGTCTCAG+TGG | - | chr5_1:19430878-19430897 | None:intergenic | 50.0% | |
| !! | ATCGAGAAGGCTTTGGAAGC+TGG | + | chr5_1:19431482-19431501 | Msa0722220:CDS | 50.0% |
| !! | TGTGCTGCTTTAGGATGGCT+AGG | - | chr5_1:19431620-19431639 | None:intergenic | 50.0% |
| !! | CGAGCAATCTGTGCTGCTTT+AGG | - | chr5_1:19431629-19431648 | None:intergenic | 50.0% |
| ACAATGGCAACACTCGCACC+TGG | + | chr5_1:19428886-19428905 | Msa0722220:exon | 55.0% | |
| !! | CTCGCTTGTTGGTTTCACGC+CGG | - | chr5_1:19428944-19428963 | None:intergenic | 55.0% |
| ! | TCTTTTCGTCGAGATCGGCG+GGG | - | chr5_1:19429002-19429021 | None:intergenic | 55.0% |
| ! | CTCTTTTCGTCGAGATCGGC+GGG | - | chr5_1:19429003-19429022 | None:intergenic | 55.0% |
| AGAACCCGGTTCACCTGTTC+CGG | + | chr5_1:19429161-19429180 | Msa0722220:CDS | 55.0% | |
| AGAACCGGAACAGGTGAACC+GGG | - | chr5_1:19429168-19429187 | None:intergenic | 55.0% | |
| GGTTTCGCACCCCTAAGAAC+CGG | - | chr5_1:19429183-19429202 | None:intergenic | 55.0% | |
| ACATGTTTGAGCCTGGGCCT+GGG | - | chr5_1:19429274-19429293 | None:intergenic | 55.0% | |
| TACATGTTTGAGCCTGGGCC+TGG | - | chr5_1:19429275-19429294 | None:intergenic | 55.0% | |
| ! | GGGAGGAGCAATGGTGGAAT+TGG | + | chr5_1:19429438-19429457 | Msa0722220:CDS | 55.0% |
| AAAGTCCTGGGGGGTTGCTT+AGG | + | chr5_1:19429532-19429551 | Msa0722220:CDS | 55.0% | |
| ! | CTTTTCCTAAGCAACCCCCC+AGG | - | chr5_1:19429540-19429559 | None:intergenic | 55.0% |
| CATGTGTCGGAGCTACAGAG+AGG | - | chr5_1:19429983-19430002 | None:intergenic | 55.0% | |
| GCATGTCTTAACCGTGGTGG+CGG | - | chr5_1:19430456-19430475 | None:intergenic | 55.0% | |
| AAGACTCAGCTCCCTGGGAA+AGG | + | chr5_1:19430620-19430639 | Msa0722220:CDS | 55.0% | |
| GCACCCCTAAGAACCGGAAC+AGG | - | chr5_1:19429177-19429196 | None:intergenic | 60.0% | |
| ! | AGGGGTGCGAAACCCTTACC+TGG | + | chr5_1:19429189-19429208 | Msa0722220:CDS | 60.0% |
| AAAAACCCAGACCCAGGCCC+AGG | + | chr5_1:19429260-19429279 | Msa0722220:CDS | 60.0% | |
| GAGGTTCTTGGGGTACAGGG+AGG | + | chr5_1:19429310-19429329 | Msa0722220:CDS | 60.0% | |
| ACCAGCAAGACTCAGCTCCC+TGG | + | chr5_1:19430614-19430633 | Msa0722220:CDS | 60.0% | |
| CCAGCAAGACTCAGCTCCCT+GGG | + | chr5_1:19430615-19430634 | Msa0722220:CDS | 60.0% | |
| GAGATCGGCGGGGACGATGT+CGG | - | chr5_1:19428992-19429011 | None:intergenic | 65.0% | |
| TTGAGCCTGGGCCTGGGTCT+GGG | - | chr5_1:19429268-19429287 | None:intergenic | 65.0% | |
| TTTGAGCCTGGGCCTGGGTC+TGG | - | chr5_1:19429269-19429288 | None:intergenic | 65.0% | |
| GAGGTGGTACTCCGCCACCA+CGG | + | chr5_1:19430442-19430461 | Msa0722220:CDS | 65.0% | |
| CCCAGGGAGCTGAGTCTTGC+TGG | - | chr5_1:19430618-19430637 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_1 | gene | 19428777 | 19431831 | 19428777 | ID=Msa0722220;Name=Msa0722220 |
| chr5_1 | mRNA | 19428777 | 19431831 | 19428777 | ID=Msa0722220-mRNA-1;Parent=Msa0722220;Name=Msa0722220-mRNA-1;_AED=0.22;_eAED=0.22;_QI=112|0.66|0.75|1|1|1|4|152|573 |
| chr5_1 | exon | 19428777 | 19429653 | 19428777 | ID=Msa0722220-mRNA-1:exon:7338;Parent=Msa0722220-mRNA-1 |
| chr5_1 | exon | 19430435 | 19430641 | 19430435 | ID=Msa0722220-mRNA-1:exon:7339;Parent=Msa0722220-mRNA-1 |
| chr5_1 | exon | 19430811 | 19430902 | 19430811 | ID=Msa0722220-mRNA-1:exon:7340;Parent=Msa0722220-mRNA-1 |
| chr5_1 | exon | 19431022 | 19431831 | 19431022 | ID=Msa0722220-mRNA-1:exon:7341;Parent=Msa0722220-mRNA-1 |
| chr5_1 | five_prime_UTR | 19428777 | 19428888 | 19428777 | ID=Msa0722220-mRNA-1:five_prime_utr;Parent=Msa0722220-mRNA-1 |
| chr5_1 | CDS | 19428889 | 19429653 | 19428889 | ID=Msa0722220-mRNA-1:cds;Parent=Msa0722220-mRNA-1 |
| chr5_1 | CDS | 19430435 | 19430641 | 19430435 | ID=Msa0722220-mRNA-1:cds;Parent=Msa0722220-mRNA-1 |
| chr5_1 | CDS | 19430811 | 19430902 | 19430811 | ID=Msa0722220-mRNA-1:cds;Parent=Msa0722220-mRNA-1 |
| chr5_1 | CDS | 19431022 | 19431679 | 19431022 | ID=Msa0722220-mRNA-1:cds;Parent=Msa0722220-mRNA-1 |
| chr5_1 | three_prime_UTR | 19431680 | 19431831 | 19431680 | ID=Msa0722220-mRNA-1:three_prime_utr;Parent=Msa0722220-mRNA-1 |
| Gene Sequence |
| Protein sequence |
