Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0720410 | XP_003612880.1 | 98.885 | 269 | 3 | 0 | 1 | 269 | 1 | 269 | 0.0 | 546 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0720410 | sp|Q9FIQ5|TRN2_ARATH | 67.286 | 269 | 88 | 0 | 1 | 269 | 1 | 269 | 2.18e-127 | 365 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0720410 | G7KDS1 | 98.885 | 269 | 3 | 0 | 1 | 269 | 1 | 269 | 0.0 | 546 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002580 | Msa0720410 | 0.816979 | 4.182287e-52 | -8.615850e-47 |
| Msa0003080 | Msa0720410 | 0.802985 | 4.324962e-49 | -8.615850e-47 |
| Msa0016040 | Msa0720410 | 0.807545 | 4.796488e-50 | -8.615850e-47 |
| Msa0017670 | Msa0720410 | 0.828105 | 1.081656e-54 | -8.615850e-47 |
| Msa0017930 | Msa0720410 | 0.807418 | 5.103295e-50 | -8.615850e-47 |
| Msa0017950 | Msa0720410 | 0.812138 | 4.930263e-51 | -8.615850e-47 |
| Msa0025160 | Msa0720410 | 0.844701 | 6.423627e-59 | -8.615850e-47 |
| Msa0025580 | Msa0720410 | 0.816733 | 4.749686e-52 | -8.615850e-47 |
| Msa0027280 | Msa0720410 | 0.823942 | 1.055501e-53 | -8.615850e-47 |
| Msa0034210 | Msa0720410 | 0.805243 | 1.466623e-49 | -8.615850e-47 |
| Msa0035340 | Msa0720410 | 0.807267 | 5.495500e-50 | -8.615850e-47 |
| Msa0035380 | Msa0720410 | 0.800559 | 1.361481e-48 | -8.615850e-47 |
| Msa0042640 | Msa0720410 | 0.836998 | 6.735533e-57 | -8.615850e-47 |
| Msa0048510 | Msa0720410 | 0.837081 | 6.414051e-57 | -8.615850e-47 |
| Msa0050660 | Msa0720410 | 0.858489 | 7.955611e-63 | -8.615850e-47 |
| Msa0050700 | Msa0720410 | 0.858561 | 7.570237e-63 | -8.615850e-47 |
| Msa0050790 | Msa0720410 | 0.854165 | 1.476417e-61 | -8.615850e-47 |
| Msa0072520 | Msa0720410 | 0.814774 | 1.298133e-51 | -8.615850e-47 |
| Msa0077340 | Msa0720410 | 0.810309 | 1.228980e-50 | -8.615850e-47 |
| Msa0077560 | Msa0720410 | 0.805325 | 1.409707e-49 | -8.615850e-47 |
| Msa0094780 | Msa0720410 | 0.808862 | 2.514016e-50 | -8.615850e-47 |
| Msa0094790 | Msa0720410 | 0.870104 | 1.877620e-66 | -8.615850e-47 |
| Msa0098040 | Msa0720410 | 0.820784 | 5.711590e-53 | -8.615850e-47 |
| Msa0102240 | Msa0720410 | 0.800795 | 1.218956e-48 | -8.615850e-47 |
| Msa0616210 | Msa0720410 | 0.809184 | 2.145437e-50 | -8.615850e-47 |
| Msa0621710 | Msa0720410 | 0.807758 | 4.323617e-50 | -8.615850e-47 |
| Msa0644410 | Msa0720410 | 0.836793 | 7.596895e-57 | -8.615850e-47 |
| Msa0655700 | Msa0720410 | 0.816964 | 4.215412e-52 | -8.615850e-47 |
| Msa0657700 | Msa0720410 | 0.836420 | 9.456135e-57 | -8.615850e-47 |
| Msa0666700 | Msa0720410 | 0.823771 | 1.157684e-53 | -8.615850e-47 |
| Msa0675330 | Msa0720410 | 0.842948 | 1.893105e-58 | -8.615850e-47 |
| Msa0699540 | Msa0720410 | 0.817218 | 3.696545e-52 | -8.615850e-47 |
| Msa0702810 | Msa0720410 | 0.828775 | 7.453416e-55 | -8.615850e-47 |
| Msa0706150 | Msa0720410 | 0.800446 | 1.435889e-48 | -8.615850e-47 |
| Msa0709440 | Msa0720410 | 0.812219 | 4.732498e-51 | -8.615850e-47 |
| Msa0720410 | Msa0722890 | 0.803601 | 3.225213e-49 | -8.615850e-47 |
| Msa0720410 | Msa0723090 | 0.809620 | 1.728924e-50 | -8.615850e-47 |
| Msa0720410 | Msa0734250 | 0.819936 | 8.939274e-53 | -8.615850e-47 |
| Msa0720410 | Msa0735780 | 0.819742 | 9.900486e-53 | -8.615850e-47 |
| Msa0720410 | Msa0743440 | 0.805433 | 1.338088e-49 | -8.615850e-47 |
| Msa0720410 | Msa0760970 | 0.887496 | 1.356293e-72 | -8.615850e-47 |
| Msa0720410 | Msa0761670 | 0.811466 | 6.904950e-51 | -8.615850e-47 |
| Msa0720410 | Msa0773630 | 0.803702 | 3.072379e-49 | -8.615850e-47 |
| Msa0720410 | Msa0792370 | 0.835712 | 1.430504e-56 | -8.615850e-47 |
| Msa0720410 | Msa0803250 | 0.877712 | 5.043723e-69 | -8.615850e-47 |
| Msa0720410 | Msa0828970 | 0.825733 | 3.989998e-54 | -8.615850e-47 |
| Msa0720410 | Msa0841590 | 0.886163 | 4.342812e-72 | -8.615850e-47 |
| Msa0720410 | Msa0859290 | 0.803844 | 2.871855e-49 | -8.615850e-47 |
| Msa0720410 | Msa0915520 | 0.803541 | 3.318657e-49 | -8.615850e-47 |
| Msa0720410 | Msa1021590 | 0.818128 | 2.303939e-52 | -8.615850e-47 |
| Msa0720410 | Msa1029530 | 0.804922 | 1.711742e-49 | -8.615850e-47 |
| Msa0720410 | Msa1042160 | 0.807439 | 5.052236e-50 | -8.615850e-47 |
| Msa0720410 | Msa1042190 | 0.810558 | 1.085634e-50 | -8.615850e-47 |
| Msa0720410 | Msa1044680 | 0.810967 | 8.856660e-51 | -8.615850e-47 |
| Msa0720410 | Msa1059020 | 0.803995 | 2.670957e-49 | -8.615850e-47 |
| Msa0720410 | Msa1078820 | 0.812550 | 4.006557e-51 | -8.615850e-47 |
| Msa0720410 | Msa1081390 | 0.803428 | 3.502720e-49 | -8.615850e-47 |
| Msa0720410 | Msa1081690 | 0.813894 | 2.031009e-51 | -8.615850e-47 |
| Msa0720410 | Msa1084530 | 0.807955 | 3.925938e-50 | -8.615850e-47 |
| Msa0720410 | Msa1099710 | 0.804051 | 2.600929e-49 | -8.615850e-47 |
| Msa0720410 | Msa1105640 | 0.820803 | 5.656056e-53 | -8.615850e-47 |
| Msa0720410 | Msa1116220 | 0.802520 | 5.396017e-49 | -8.615850e-47 |
| Msa0720410 | Msa1123210 | 0.818705 | 1.705140e-52 | -8.615850e-47 |
| Msa0720410 | Msa1123970 | 0.817800 | 2.732844e-52 | -8.615850e-47 |
| Msa0720410 | Msa1125820 | 0.812931 | 3.306262e-51 | -8.615850e-47 |
| Msa0720410 | Msa1125990 | 0.815704 | 8.065717e-52 | -8.615850e-47 |
| Msa0720410 | Msa1167470 | 0.804087 | 2.556215e-49 | -8.615850e-47 |
| Msa0720410 | Msa1169650 | 0.814811 | 1.273665e-51 | -8.615850e-47 |
| Msa0720410 | Msa1171290 | 0.804816 | 1.801312e-49 | -8.615850e-47 |
| Msa0720410 | Msa1175990 | 0.804893 | 1.735679e-49 | -8.615850e-47 |
| Msa0720410 | Msa1184890 | 0.832626 | 8.492420e-56 | -8.615850e-47 |
| Msa0720410 | Msa1192560 | 0.866656 | 2.431137e-65 | -8.615850e-47 |
| Msa0720410 | Msa1192590 | 0.868414 | 6.647747e-66 | -8.615850e-47 |
| Msa0720410 | Msa1208950 | 0.809744 | 1.626143e-50 | -8.615850e-47 |
| Msa0720410 | Msa1228580 | 0.807903 | 4.026592e-50 | -8.615850e-47 |
| Msa0720410 | Msa1263780 | 0.807757 | 4.325504e-50 | -8.615850e-47 |
| Msa0720410 | Msa1265650 | 0.815501 | 8.952758e-52 | -8.615850e-47 |
| Msa0720410 | Msa1303560 | 0.808333 | 3.261684e-50 | -8.615850e-47 |
| Msa0720410 | Msa1303650 | 0.815791 | 7.714880e-52 | -8.615850e-47 |
| Msa0720410 | Msa1343170 | 0.803584 | 3.251900e-49 | -8.615850e-47 |
| Msa0720410 | Msa1343180 | 0.800306 | 1.532913e-48 | -8.615850e-47 |
| Msa0720410 | Msa1348170 | -0.804425 | 2.173592e-49 | -8.615850e-47 |
| Msa0720410 | Msa1356600 | -0.811839 | 5.728417e-51 | -8.615850e-47 |
| Msa0720410 | Msa1364410 | 0.804320 | 2.286227e-49 | -8.615850e-47 |
| Msa0720410 | Msa1368750 | 0.806236 | 9.074551e-50 | -8.615850e-47 |
| Msa0720410 | Msa1372040 | 0.828758 | 7.524306e-55 | -8.615850e-47 |
| Msa0720410 | Msa1374790 | 0.808485 | 3.026449e-50 | -8.615850e-47 |
| Msa0720410 | Msa1382300 | 0.820116 | 8.131010e-53 | -8.615850e-47 |
| Msa0720410 | Msa1384150 | 0.815630 | 8.376828e-52 | -8.615850e-47 |
| Msa0720410 | Msa1393780 | 0.815465 | 9.116794e-52 | -8.615850e-47 |
| Msa0720410 | Msa1405460 | 0.831638 | 1.490482e-55 | -8.615850e-47 |
| Msa0720410 | Msa1409410 | 0.838872 | 2.221396e-57 | -8.615850e-47 |
| Msa0720410 | Msa1415540 | 0.848579 | 5.601996e-60 | -8.615850e-47 |
| Msa0720410 | Msa1417370 | 0.825528 | 4.463082e-54 | -8.615850e-47 |
| Msa0720410 | Msa1427100 | 0.826999 | 1.993158e-54 | -8.615850e-47 |
| Msa0720410 | Msa1431480 | 0.813062 | 3.095071e-51 | -8.615850e-47 |
| Msa0720410 | Msa1433860 | 0.808776 | 2.622398e-50 | -8.615850e-47 |
| Msa0720410 | Msa1440630 | 0.855189 | 7.453345e-62 | -8.615850e-47 |
| Msa0720410 | Msa1451820 | 0.808644 | 2.798283e-50 | -8.615850e-47 |
| Msa0720410 | Msa1452140 | 0.804062 | 2.586487e-49 | -8.615850e-47 |
| Msa0121330 | Msa0720410 | 0.826893 | 2.113060e-54 | -8.615850e-47 |
| Msa0123070 | Msa0720410 | 0.830051 | 3.650332e-55 | -8.615850e-47 |
| Msa0125360 | Msa0720410 | 0.808338 | 3.253262e-50 | -8.615850e-47 |
| Msa0128310 | Msa0720410 | 0.802829 | 4.660080e-49 | -8.615850e-47 |
| Msa0140130 | Msa0720410 | 0.833971 | 3.925438e-56 | -8.615850e-47 |
| Msa0140280 | Msa0720410 | 0.824932 | 6.175006e-54 | -8.615850e-47 |
| Msa0143670 | Msa0720410 | 0.803646 | 3.156524e-49 | -8.615850e-47 |
| Msa0146650 | Msa0720410 | 0.803506 | 3.374024e-49 | -8.615850e-47 |
| Msa0161930 | Msa0720410 | 0.803339 | 3.654068e-49 | -8.615850e-47 |
| Msa0174440 | Msa0720410 | 0.807608 | 4.651852e-50 | -8.615850e-47 |
| Msa0176060 | Msa0720410 | 0.812593 | 3.921603e-51 | -8.615850e-47 |
| Msa0188610 | Msa0720410 | 0.812208 | 4.759812e-51 | -8.615850e-47 |
| Msa0200050 | Msa0720410 | 0.822671 | 2.091572e-53 | -8.615850e-47 |
| Msa0230800 | Msa0720410 | 0.826485 | 2.644221e-54 | -8.615850e-47 |
| Msa0230870 | Msa0720410 | 0.818429 | 1.968983e-52 | -8.615850e-47 |
| Msa0235290 | Msa0720410 | 0.801421 | 9.075419e-49 | -8.615850e-47 |
| Msa0365210 | Msa0720410 | 0.805470 | 1.314517e-49 | -8.615850e-47 |
| Msa0367690 | Msa0720410 | 0.839036 | 2.014979e-57 | -8.615850e-47 |
| Msa0369790 | Msa0720410 | 0.809265 | 2.060629e-50 | -8.615850e-47 |
| Msa0375330 | Msa0720410 | -0.809352 | 1.974011e-50 | -8.615850e-47 |
| Msa0380670 | Msa0720410 | 0.820009 | 8.600648e-53 | -8.615850e-47 |
| Msa0415450 | Msa0720410 | 0.834393 | 3.076548e-56 | -8.615850e-47 |
| Msa0419540 | Msa0720410 | 0.808191 | 3.495479e-50 | -8.615850e-47 |
| Msa0430300 | Msa0720410 | 0.816917 | 4.318696e-52 | -8.615850e-47 |
| Msa0432010 | Msa0720410 | 0.805625 | 1.219632e-49 | -8.615850e-47 |
| Msa0432140 | Msa0720410 | 0.801852 | 7.405518e-49 | -8.615850e-47 |
| Msa0436910 | Msa0720410 | 0.829506 | 4.955426e-55 | -8.615850e-47 |
| Msa0457570 | Msa0720410 | 0.819829 | 9.455570e-53 | -8.615850e-47 |
| Msa0460070 | Msa0720410 | 0.830866 | 2.306830e-55 | -8.615850e-47 |
| Msa0464000 | Msa0720410 | 0.810208 | 1.291984e-50 | -8.615850e-47 |
| Msa0465530 | Msa0720410 | 0.809768 | 1.607215e-50 | -8.615850e-47 |
| Msa0472950 | Msa0720410 | 0.808694 | 2.731159e-50 | -8.615850e-47 |
| Msa0481890 | Msa0720410 | 0.808862 | 2.513694e-50 | -8.615850e-47 |
| Msa0241610 | Msa0720410 | 0.805303 | 1.424571e-49 | -8.615850e-47 |
| Msa0242590 | Msa0720410 | 0.829480 | 5.028630e-55 | -8.615850e-47 |
| Msa0270340 | Msa0720410 | 0.820452 | 6.809288e-53 | -8.615850e-47 |
| Msa0279690 | Msa0720410 | 0.838857 | 2.241385e-57 | -8.615850e-47 |
| Msa0280790 | Msa0720410 | 0.824711 | 6.961572e-54 | -8.615850e-47 |
| Msa0284800 | Msa0720410 | 0.832154 | 1.111260e-55 | -8.615850e-47 |
| Msa0298470 | Msa0720410 | 0.802822 | 4.674463e-49 | -8.615850e-47 |
| Msa0307670 | Msa0720410 | 0.833267 | 5.881868e-56 | -8.615850e-47 |
| Msa0330520 | Msa0720410 | 0.839005 | 2.051764e-57 | -8.615850e-47 |
| Msa0509550 | Msa0720410 | 0.803988 | 2.680499e-49 | -8.615850e-47 |
| Msa0517250 | Msa0720410 | 0.826533 | 2.574888e-54 | -8.615850e-47 |
| Msa0519750 | Msa0720410 | 0.829341 | 5.433452e-55 | -8.615850e-47 |
| Msa0519820 | Msa0720410 | 0.809173 | 2.156211e-50 | -8.615850e-47 |
| Msa0519830 | Msa0720410 | 0.823699 | 1.203444e-53 | -8.615850e-47 |
| Msa0520990 | Msa0720410 | 0.810082 | 1.375546e-50 | -8.615850e-47 |
| Msa0528570 | Msa0720410 | 0.846619 | 1.938979e-59 | -8.615850e-47 |
| Msa0529030 | Msa0720410 | 0.830943 | 2.208236e-55 | -8.615850e-47 |
| Msa0531960 | Msa0720410 | 0.810923 | 9.053490e-51 | -8.615850e-47 |
| Msa0541300 | Msa0720410 | 0.845333 | 4.335775e-59 | -8.615850e-47 |
| Msa0541310 | Msa0720410 | 0.843073 | 1.753307e-58 | -8.615850e-47 |
| Msa0543560 | Msa0720410 | 0.801006 | 1.103466e-48 | -8.615850e-47 |
| Msa0548470 | Msa0720410 | 0.838112 | 3.488314e-57 | -8.615850e-47 |
| Msa0557460 | Msa0720410 | 0.814070 | 1.858048e-51 | -8.615850e-47 |
| Msa0562350 | Msa0720410 | 0.802289 | 6.020544e-49 | -8.615850e-47 |
| Msa0567170 | Msa0720410 | 0.811016 | 8.642551e-51 | -8.615850e-47 |
| Msa0570010 | Msa0720410 | 0.823201 | 1.573163e-53 | -8.615850e-47 |
| Msa0571290 | Msa0720410 | 0.812945 | 3.284195e-51 | -8.615850e-47 |
| Msa0573810 | Msa0720410 | 0.806768 | 7.008444e-50 | -8.615850e-47 |
| Msa0580810 | Msa0720410 | 0.815033 | 1.137482e-51 | -8.615850e-47 |
| Msa0581470 | Msa0720410 | 0.805235 | 1.472154e-49 | -8.615850e-47 |
| Msa0585020 | Msa0720410 | 0.839475 | 1.549398e-57 | -8.615850e-47 |
| Msa0597270 | Msa0720410 | 0.833409 | 5.421320e-56 | -8.615850e-47 |
| Msa0599420 | Msa0720410 | 0.808088 | 3.677714e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0720410 | MtrunA17_Chr5g0411131 | 98.885 | 269 | 3 | 0 | 1 | 269 | 1 | 269 | 0.0 | 546 |
| Msa0720410 | MtrunA17_Chr8g0366571 | 75.093 | 269 | 67 | 0 | 1 | 269 | 1 | 269 | 2.20e-151 | 423 |
| Msa0720410 | MtrunA17_Chr8g0389221 | 50.373 | 268 | 133 | 0 | 1 | 268 | 1 | 268 | 6.46e-100 | 293 |
| Msa0720410 | MtrunA17_Chr4g0030021 | 45.956 | 272 | 141 | 3 | 1 | 266 | 1 | 272 | 1.67e-78 | 239 |
| Msa0720410 | MtrunA17_Chr4g0073251 | 45.318 | 267 | 142 | 3 | 1 | 264 | 1 | 266 | 3.02e-76 | 232 |
| Msa0720410 | MtrunA17_Chr1g0199961 | 41.445 | 263 | 144 | 3 | 4 | 266 | 5 | 257 | 1.64e-66 | 208 |
| Msa0720410 | MtrunA17_Chr6g0462061 | 41.016 | 256 | 141 | 3 | 4 | 259 | 5 | 250 | 1.79e-66 | 208 |
| Msa0720410 | MtrunA17_Chr8g0386471 | 32.171 | 258 | 169 | 3 | 1 | 255 | 3 | 257 | 3.04e-55 | 179 |
| Msa0720410 | MtrunA17_Chr4g0062101 | 34.231 | 260 | 168 | 2 | 3 | 259 | 6 | 265 | 5.47e-54 | 176 |
| Msa0720410 | MtrunA17_Chr5g0447681 | 28.458 | 253 | 155 | 6 | 5 | 252 | 50 | 281 | 1.08e-29 | 114 |
| Msa0720410 | MtrunA17_Chr2g0307641 | 37.662 | 77 | 46 | 1 | 182 | 256 | 3 | 79 | 4.03e-16 | 72.0 |
| Msa0720410 | MtrunA17_Chr2g0307651 | 27.564 | 156 | 112 | 1 | 3 | 158 | 4 | 158 | 3.56e-13 | 66.2 |
| Msa0720410 | MtrunA17_Chr5g0447671 | 29.771 | 131 | 68 | 4 | 118 | 243 | 47 | 158 | 1.31e-11 | 61.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0720410 | AT5G46700.1 | 67.286 | 269 | 88 | 0 | 1 | 269 | 1 | 269 | 2.21e-128 | 365 |
| Msa0720410 | AT2G19580.1 | 57.249 | 269 | 114 | 1 | 1 | 268 | 1 | 269 | 1.72e-100 | 295 |
| Msa0720410 | AT3G45600.1 | 44.528 | 265 | 141 | 3 | 1 | 259 | 1 | 265 | 1.82e-81 | 247 |
| Msa0720410 | AT4G28050.1 | 42.636 | 258 | 146 | 1 | 4 | 259 | 5 | 262 | 4.43e-78 | 237 |
| Msa0720410 | AT4G30430.1 | 41.603 | 262 | 151 | 1 | 3 | 262 | 4 | 265 | 2.43e-76 | 233 |
| Msa0720410 | AT2G23810.1 | 42.966 | 263 | 147 | 2 | 4 | 263 | 5 | 267 | 3.22e-76 | 233 |
| Msa0720410 | AT5G60220.1 | 43.893 | 262 | 141 | 3 | 1 | 256 | 1 | 262 | 2.11e-63 | 202 |
| Msa0720410 | AT1G18520.1 | 38.550 | 262 | 153 | 4 | 3 | 257 | 4 | 264 | 5.32e-61 | 194 |
| Msa0720410 | AT3G12090.1 | 40.316 | 253 | 139 | 4 | 4 | 256 | 5 | 245 | 1.33e-58 | 188 |
| Msa0720410 | AT4G23410.1 | 37.066 | 259 | 152 | 3 | 3 | 261 | 4 | 251 | 3.23e-55 | 179 |
| Msa0720410 | AT1G63260.2 | 32.171 | 258 | 167 | 3 | 1 | 257 | 3 | 253 | 2.83e-54 | 176 |
| Msa0720410 | AT1G63260.6 | 32.510 | 243 | 162 | 2 | 1 | 242 | 3 | 244 | 3.47e-51 | 169 |
| Msa0720410 | AT1G63260.1 | 32.510 | 243 | 162 | 2 | 1 | 242 | 3 | 244 | 3.47e-51 | 169 |
| Msa0720410 | AT1G63260.3 | 32.510 | 243 | 162 | 2 | 1 | 242 | 3 | 244 | 4.55e-51 | 169 |
| Msa0720410 | AT1G63260.5 | 32.719 | 217 | 144 | 2 | 1 | 216 | 3 | 218 | 3.59e-46 | 154 |
| Msa0720410 | AT3G45600.2 | 43.275 | 171 | 92 | 2 | 1 | 166 | 1 | 171 | 3.08e-43 | 146 |
| Msa0720410 | AT2G03840.1 | 29.707 | 239 | 160 | 4 | 19 | 251 | 32 | 268 | 1.45e-37 | 134 |
| Msa0720410 | AT1G63260.4 | 30.337 | 178 | 123 | 1 | 1 | 178 | 3 | 179 | 2.28e-33 | 121 |
| Msa0720410 | AT5G23030.1 | 27.132 | 258 | 183 | 2 | 1 | 256 | 2 | 256 | 3.00e-31 | 117 |
| Msa0720410 | AT5G57810.1 | 26.316 | 133 | 82 | 1 | 131 | 247 | 173 | 305 | 4.51e-16 | 77.0 |
Find 50 sgRNAs with CRISPR-Local
Find 154 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGAACCTAATAGGGCTTATT+TGG | 0.104253 | 5_1:+16386132 | Msa0720410:CDS |
| CTGGTCTCATTGGTTCCTTT+TGG | 0.214283 | 5_1:+16385996 | Msa0720410:CDS |
| CTCTTAGTTGTGTCTCTTGC+TGG | 0.223492 | 5_1:+16385977 | Msa0720410:CDS |
| ATGTCTGCTGCATTGTTTAT+TGG | 0.243435 | 5_1:-16386726 | None:intergenic |
| TATTATCTTGCTAGTTTGTT+TGG | 0.252856 | 5_1:+16386066 | Msa0720410:CDS |
| TATTCCAAATAAGCCCTATT+AGG | 0.318593 | 5_1:-16386136 | None:intergenic |
| TTAATTGTGGTTTATTTGAT+TGG | 0.318944 | 5_1:+16386882 | Msa0720410:CDS |
| CAATCATTGGTGCTGGAATC+TGG | 0.324358 | 5_1:+16385885 | Msa0720410:CDS |
| ATGGTATGATTGAACCTAAT+AGG | 0.329364 | 5_1:+16386122 | Msa0720410:CDS |
| TTGCAACAAGGTAGAATATA+AGG | 0.332287 | 5_1:-16386033 | None:intergenic |
| GCGAAAGAGATCCTCAGTTT+TGG | 0.353207 | 5_1:-16386925 | None:intergenic |
| GTGTCTCTTGCTGGTCTCAT+TGG | 0.354014 | 5_1:+16385986 | Msa0720410:CDS |
| GGCTTATTTGGAATACCGTT+TGG | 0.361064 | 5_1:+16386144 | Msa0720410:CDS |
| CATTTGTGAACCCAACATAC+TGG | 0.397625 | 5_1:+16386697 | Msa0720410:CDS |
| CTCATGCAAGGCTGGTTTGT+TGG | 0.405503 | 5_1:+16386800 | Msa0720410:CDS |
| TTGGACTAATCCAGTATGTT+GGG | 0.406980 | 5_1:-16386707 | None:intergenic |
| CAGATTCCAGCACCAATGAT+TGG | 0.408669 | 5_1:-16385884 | None:intergenic |
| ATCCTTTCAATCCCAATCAT+TGG | 0.408710 | 5_1:+16385872 | Msa0720410:CDS |
| TGCATTATTTATACCTGCAT+TGG | 0.409082 | 5_1:-16386313 | None:intergenic |
| TTTAACATTGGTGATGAAAT+TGG | 0.419620 | 5_1:+16387009 | Msa0720410:three_prime_UTR |
| AGTTGTAACAAAGTTGTGTT+TGG | 0.435133 | 5_1:-16386773 | None:intergenic |
| AGATTCCAGCACCAATGATT+GGG | 0.447069 | 5_1:-16385883 | None:intergenic |
| TGGTATGATTGAACCTAATA+GGG | 0.447157 | 5_1:+16386123 | Msa0720410:CDS |
| TTTGTTGGCAAATCTTAGAA+AGG | 0.458886 | 5_1:+16386815 | Msa0720410:CDS |
| GCAATGAGCAACAACATCAT+AGG | 0.463723 | 5_1:+16385827 | Msa0720410:CDS |
| ATTGGACTAATCCAGTATGT+TGG | 0.468680 | 5_1:-16386708 | None:intergenic |
| GTGTACATGGTTACTCTTCG+TGG | 0.469403 | 5_1:+16386097 | Msa0720410:CDS |
| CATGTGTCAAGTTTCTTCAA+TGG | 0.476338 | 5_1:+16385930 | Msa0720410:CDS |
| CACCAATGATTGGGATTGAA+AGG | 0.479147 | 5_1:-16385874 | None:intergenic |
| TCAATCCCAATCATTGGTGC+TGG | 0.486549 | 5_1:+16385878 | Msa0720410:CDS |
| AACTGCGACTCATGCAAGGC+TGG | 0.493492 | 5_1:+16386792 | Msa0720410:CDS |
| CAGACATGGATTGTCTTCAA+TGG | 0.495893 | 5_1:+16386742 | Msa0720410:CDS |
| CAATGGCCAGTCATAATCCT+AGG | 0.501117 | 5_1:+16385947 | Msa0720410:CDS |
| TTGAAAGGATTACAGCTACT+AGG | 0.501297 | 5_1:-16385859 | None:intergenic |
| ATGGTTACTCTTCGTGGTCA+TGG | 0.501755 | 5_1:+16386103 | Msa0720410:CDS |
| GAGACATGAGATTCTCCAAA+AGG | 0.516594 | 5_1:-16386011 | None:intergenic |
| AGCATGTAAGATGTAAAGCT+TGG | 0.526590 | 5_1:+16386983 | Msa0720410:three_prime_UTR |
| TGGCAAATCTTAGAAAGGAA+TGG | 0.530252 | 5_1:+16386820 | Msa0720410:CDS |
| GTGTATGCACATTGTGTTGG+TGG | 0.546354 | 5_1:-16386675 | None:intergenic |
| TGCACGTCTTACACCAATGC+AGG | 0.553446 | 5_1:+16386300 | Msa0720410:CDS |
| AATAAACAATGCAGCAGACA+TGG | 0.558636 | 5_1:+16386728 | Msa0720410:CDS |
| CTCTTTCGCAAGTACAAACA+AGG | 0.567497 | 5_1:+16386939 | Msa0720410:CDS |
| AACTTGACACATGTGTCTGC+TGG | 0.569579 | 5_1:-16385920 | None:intergenic |
| AAAGCTTGGTGCTTTAACAT+TGG | 0.572107 | 5_1:+16386997 | Msa0720410:three_prime_UTR |
| TTACAACTGCGACTCATGCA+AGG | 0.584340 | 5_1:+16386788 | Msa0720410:CDS |
| AGAACACCTAGGATTATGAC+TGG | 0.617019 | 5_1:-16385953 | None:intergenic |
| AATGTGTATGCACATTGTGT+TGG | 0.656084 | 5_1:-16386678 | None:intergenic |
| TAAGCACAAGCATTGCAACA+AGG | 0.674562 | 5_1:-16386045 | None:intergenic |
| CAACTAAGAGAAGAACACCT+AGG | 0.686330 | 5_1:-16385964 | None:intergenic |
| CTTAGTGAAACAAATATGTG+TGG | 0.704201 | 5_1:+16386235 | Msa0720410:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTAAAGGGGAAAAAAATTAT+TGG | - | chr5_1:16386629-16386648 | None:intergenic | 20.0% |
| !! | AGACTGAAAAATAATTAAAG+GGG | - | chr5_1:16386643-16386662 | None:intergenic | 20.0% |
| !! | CAGACTGAAAAATAATTAAA+GGG | - | chr5_1:16386644-16386663 | None:intergenic | 20.0% |
| !!! | CTTTAATTATTTTTCAGTCT+GGG | + | chr5_1:16386643-16386662 | Msa0720410:intron | 20.0% |
| !! | TTAATTGTGGTTTATTTGAT+TGG | + | chr5_1:16386882-16386901 | Msa0720410:CDS | 20.0% |
| !! | TTAAAGGGGAAAAAAATTAT+TGG | - | chr5_1:16386629-16386648 | None:intergenic | 20.0% |
| !! | AGACTGAAAAATAATTAAAG+GGG | - | chr5_1:16386643-16386662 | None:intergenic | 20.0% |
| !! | CAGACTGAAAAATAATTAAA+GGG | - | chr5_1:16386644-16386663 | None:intergenic | 20.0% |
| !!! | CTTTAATTATTTTTCAGTCT+GGG | + | chr5_1:16386643-16386662 | Msa0720410:intron | 20.0% |
| !! | TTAATTGTGGTTTATTTGAT+TGG | + | chr5_1:16386882-16386901 | Msa0720410:CDS | 20.0% |
| !!! | TATTATCTTGCTAGTTTGTT+TGG | + | chr5_1:16386066-16386085 | Msa0720410:CDS | 25.0% |
| !!! | TTTGGTTATTTTTGTGTACA+TGG | + | chr5_1:16386084-16386103 | Msa0720410:CDS | 25.0% |
| !!! | AGTTAGAAGTTCTTTTAAGT+GGG | + | chr5_1:16386195-16386214 | Msa0720410:CDS | 25.0% |
| ! | CCAGACTGAAAAATAATTAA+AGG | - | chr5_1:16386645-16386664 | None:intergenic | 25.0% |
| !!! | CCTTTAATTATTTTTCAGTC+TGG | + | chr5_1:16386642-16386661 | Msa0720410:intron | 25.0% |
| !!! | TTTAACATTGGTGATGAAAT+TGG | + | chr5_1:16387009-16387028 | Msa0720410:three_prime_UTR | 25.0% |
| !!! | TATTATCTTGCTAGTTTGTT+TGG | + | chr5_1:16386066-16386085 | Msa0720410:CDS | 25.0% |
| !!! | TTTGGTTATTTTTGTGTACA+TGG | + | chr5_1:16386084-16386103 | Msa0720410:CDS | 25.0% |
| !!! | AGTTAGAAGTTCTTTTAAGT+GGG | + | chr5_1:16386195-16386214 | Msa0720410:CDS | 25.0% |
| ! | CCAGACTGAAAAATAATTAA+AGG | - | chr5_1:16386645-16386664 | None:intergenic | 25.0% |
| !!! | CCTTTAATTATTTTTCAGTC+TGG | + | chr5_1:16386642-16386661 | Msa0720410:intron | 25.0% |
| !!! | TTTAACATTGGTGATGAAAT+TGG | + | chr5_1:16387009-16387028 | Msa0720410:three_prime_UTR | 25.0% |
| TTGCAACAAGGTAGAATATA+AGG | - | chr5_1:16386036-16386055 | None:intergenic | 30.0% | |
| ATGGTATGATTGAACCTAAT+AGG | + | chr5_1:16386122-16386141 | Msa0720410:CDS | 30.0% | |
| TGGTATGATTGAACCTAATA+GGG | + | chr5_1:16386123-16386142 | Msa0720410:CDS | 30.0% | |
| TATTCCAAATAAGCCCTATT+AGG | - | chr5_1:16386139-16386158 | None:intergenic | 30.0% | |
| ! | GAGTTAGAAGTTCTTTTAAG+TGG | + | chr5_1:16386194-16386213 | Msa0720410:CDS | 30.0% |
| CTTAGTGAAACAAATATGTG+TGG | + | chr5_1:16386235-16386254 | Msa0720410:CDS | 30.0% | |
| ! | GTTGAATCAAAGTTTTCGTA+TGG | + | chr5_1:16386261-16386280 | Msa0720410:CDS | 30.0% |
| TGCATTATTTATACCTGCAT+TGG | - | chr5_1:16386316-16386335 | None:intergenic | 30.0% | |
| ATCTCAAGATAAACCCATTT+CGG | + | chr5_1:16386422-16386441 | Msa0720410:intron | 30.0% | |
| AGTTGTAACAAAGTTGTGTT+TGG | - | chr5_1:16386776-16386795 | None:intergenic | 30.0% | |
| TTTGTTGGCAAATCTTAGAA+AGG | + | chr5_1:16386815-16386834 | Msa0720410:CDS | 30.0% | |
| !!! | CAGTGTTGTTGTTTTAATTG+TGG | + | chr5_1:16386869-16386888 | Msa0720410:CDS | 30.0% |
| TTGCAACAAGGTAGAATATA+AGG | - | chr5_1:16386036-16386055 | None:intergenic | 30.0% | |
| ATGGTATGATTGAACCTAAT+AGG | + | chr5_1:16386122-16386141 | Msa0720410:CDS | 30.0% | |
| TGGTATGATTGAACCTAATA+GGG | + | chr5_1:16386123-16386142 | Msa0720410:CDS | 30.0% | |
| TATTCCAAATAAGCCCTATT+AGG | - | chr5_1:16386139-16386158 | None:intergenic | 30.0% | |
| ! | GAGTTAGAAGTTCTTTTAAG+TGG | + | chr5_1:16386194-16386213 | Msa0720410:CDS | 30.0% |
| CTTAGTGAAACAAATATGTG+TGG | + | chr5_1:16386235-16386254 | Msa0720410:CDS | 30.0% | |
| ! | GTTGAATCAAAGTTTTCGTA+TGG | + | chr5_1:16386261-16386280 | Msa0720410:CDS | 30.0% |
| TGCATTATTTATACCTGCAT+TGG | - | chr5_1:16386316-16386335 | None:intergenic | 30.0% | |
| ATCTCAAGATAAACCCATTT+CGG | + | chr5_1:16386422-16386441 | Msa0720410:intron | 30.0% | |
| AGTTGTAACAAAGTTGTGTT+TGG | - | chr5_1:16386776-16386795 | None:intergenic | 30.0% | |
| TTTGTTGGCAAATCTTAGAA+AGG | + | chr5_1:16386815-16386834 | Msa0720410:CDS | 30.0% | |
| !!! | CAGTGTTGTTGTTTTAATTG+TGG | + | chr5_1:16386869-16386888 | Msa0720410:CDS | 30.0% |
| TTGAAAGGATTACAGCTACT+AGG | - | chr5_1:16385862-16385881 | None:intergenic | 35.0% | |
| ATCCTTTCAATCCCAATCAT+TGG | + | chr5_1:16385872-16385891 | Msa0720410:CDS | 35.0% | |
| CATGTGTCAAGTTTCTTCAA+TGG | + | chr5_1:16385930-16385949 | Msa0720410:CDS | 35.0% | |
| TGAACCTAATAGGGCTTATT+TGG | + | chr5_1:16386132-16386151 | Msa0720410:CDS | 35.0% | |
| ! | TACCGTTTGGATGATTTTTC+TGG | + | chr5_1:16386157-16386176 | Msa0720410:CDS | 35.0% |
| ! | ACCGTTTGGATGATTTTTCT+GGG | + | chr5_1:16386158-16386177 | Msa0720410:CDS | 35.0% |
| ACCCAGAAAAATCATCCAAA+CGG | - | chr5_1:16386162-16386181 | None:intergenic | 35.0% | |
| ! | GATCTGTATCTAGTTTCACT+AGG | - | chr5_1:16386384-16386403 | None:intergenic | 35.0% |
| !! | GTGACATTGACTTGAAATCT+GGG | + | chr5_1:16386453-16386472 | Msa0720410:intron | 35.0% |
| AATGTGTATGCACATTGTGT+TGG | - | chr5_1:16386681-16386700 | None:intergenic | 35.0% | |
| TTGGACTAATCCAGTATGTT+GGG | - | chr5_1:16386710-16386729 | None:intergenic | 35.0% | |
| ATTGGACTAATCCAGTATGT+TGG | - | chr5_1:16386711-16386730 | None:intergenic | 35.0% | |
| ATGTCTGCTGCATTGTTTAT+TGG | - | chr5_1:16386729-16386748 | None:intergenic | 35.0% | |
| AATAAACAATGCAGCAGACA+TGG | + | chr5_1:16386728-16386747 | Msa0720410:CDS | 35.0% | |
| TGGCAAATCTTAGAAAGGAA+TGG | + | chr5_1:16386820-16386839 | Msa0720410:CDS | 35.0% | |
| !! | TGATTGGTTGCTTTGCTTTT+AGG | + | chr5_1:16386898-16386917 | Msa0720410:CDS | 35.0% |
| !! | TTTTAGGAATGCCAAAACTG+AGG | + | chr5_1:16386914-16386933 | Msa0720410:CDS | 35.0% |
| AGCATGTAAGATGTAAAGCT+TGG | + | chr5_1:16386983-16387002 | Msa0720410:three_prime_UTR | 35.0% | |
| !! | AAAGCTTGGTGCTTTAACAT+TGG | + | chr5_1:16386997-16387016 | Msa0720410:three_prime_UTR | 35.0% |
| TTGAAAGGATTACAGCTACT+AGG | - | chr5_1:16385862-16385881 | None:intergenic | 35.0% | |
| ATCCTTTCAATCCCAATCAT+TGG | + | chr5_1:16385872-16385891 | Msa0720410:CDS | 35.0% | |
| CATGTGTCAAGTTTCTTCAA+TGG | + | chr5_1:16385930-16385949 | Msa0720410:CDS | 35.0% | |
| TGAACCTAATAGGGCTTATT+TGG | + | chr5_1:16386132-16386151 | Msa0720410:CDS | 35.0% | |
| ! | TACCGTTTGGATGATTTTTC+TGG | + | chr5_1:16386157-16386176 | Msa0720410:CDS | 35.0% |
| ! | ACCGTTTGGATGATTTTTCT+GGG | + | chr5_1:16386158-16386177 | Msa0720410:CDS | 35.0% |
| ACCCAGAAAAATCATCCAAA+CGG | - | chr5_1:16386162-16386181 | None:intergenic | 35.0% | |
| ! | GATCTGTATCTAGTTTCACT+AGG | - | chr5_1:16386384-16386403 | None:intergenic | 35.0% |
| !! | GTGACATTGACTTGAAATCT+GGG | + | chr5_1:16386453-16386472 | Msa0720410:intron | 35.0% |
| AATGTGTATGCACATTGTGT+TGG | - | chr5_1:16386681-16386700 | None:intergenic | 35.0% | |
| TTGGACTAATCCAGTATGTT+GGG | - | chr5_1:16386710-16386729 | None:intergenic | 35.0% | |
| ATTGGACTAATCCAGTATGT+TGG | - | chr5_1:16386711-16386730 | None:intergenic | 35.0% | |
| ATGTCTGCTGCATTGTTTAT+TGG | - | chr5_1:16386729-16386748 | None:intergenic | 35.0% | |
| AATAAACAATGCAGCAGACA+TGG | + | chr5_1:16386728-16386747 | Msa0720410:CDS | 35.0% | |
| TGGCAAATCTTAGAAAGGAA+TGG | + | chr5_1:16386820-16386839 | Msa0720410:CDS | 35.0% | |
| !! | TGATTGGTTGCTTTGCTTTT+AGG | + | chr5_1:16386898-16386917 | Msa0720410:CDS | 35.0% |
| !! | TTTTAGGAATGCCAAAACTG+AGG | + | chr5_1:16386914-16386933 | Msa0720410:CDS | 35.0% |
| AGCATGTAAGATGTAAAGCT+TGG | + | chr5_1:16386983-16387002 | Msa0720410:three_prime_UTR | 35.0% | |
| !! | AAAGCTTGGTGCTTTAACAT+TGG | + | chr5_1:16386997-16387016 | Msa0720410:three_prime_UTR | 35.0% |
| GCAATGAGCAACAACATCAT+AGG | + | chr5_1:16385827-16385846 | Msa0720410:CDS | 40.0% | |
| CACCAATGATTGGGATTGAA+AGG | - | chr5_1:16385877-16385896 | None:intergenic | 40.0% | |
| AGATTCCAGCACCAATGATT+GGG | - | chr5_1:16385886-16385905 | None:intergenic | 40.0% | |
| AGAACACCTAGGATTATGAC+TGG | - | chr5_1:16385956-16385975 | None:intergenic | 40.0% | |
| CAACTAAGAGAAGAACACCT+AGG | - | chr5_1:16385967-16385986 | None:intergenic | 40.0% | |
| GAGACATGAGATTCTCCAAA+AGG | - | chr5_1:16386014-16386033 | None:intergenic | 40.0% | |
| ! | TAAGCACAAGCATTGCAACA+AGG | - | chr5_1:16386048-16386067 | None:intergenic | 40.0% |
| ! | GGCTTATTTGGAATACCGTT+TGG | + | chr5_1:16386144-16386163 | Msa0720410:CDS | 40.0% |
| ! | TCAAAGTTTTCGTATGGCTC+AGG | + | chr5_1:16386267-16386286 | Msa0720410:CDS | 40.0% |
| CAAGATAAACCCATTTCGGT+TGG | + | chr5_1:16386426-16386445 | Msa0720410:intron | 40.0% | |
| !! | GGTGACATTGACTTGAAATC+TGG | + | chr5_1:16386452-16386471 | Msa0720410:intron | 40.0% |
| CATTTGTGAACCCAACATAC+TGG | + | chr5_1:16386697-16386716 | Msa0720410:CDS | 40.0% | |
| ! | CAGACATGGATTGTCTTCAA+TGG | + | chr5_1:16386742-16386761 | Msa0720410:CDS | 40.0% |
| CTCTTTCGCAAGTACAAACA+AGG | + | chr5_1:16386939-16386958 | Msa0720410:CDS | 40.0% | |
| GCAATGAGCAACAACATCAT+AGG | + | chr5_1:16385827-16385846 | Msa0720410:CDS | 40.0% | |
| CACCAATGATTGGGATTGAA+AGG | - | chr5_1:16385877-16385896 | None:intergenic | 40.0% | |
| AGATTCCAGCACCAATGATT+GGG | - | chr5_1:16385886-16385905 | None:intergenic | 40.0% | |
| AGAACACCTAGGATTATGAC+TGG | - | chr5_1:16385956-16385975 | None:intergenic | 40.0% | |
| CAACTAAGAGAAGAACACCT+AGG | - | chr5_1:16385967-16385986 | None:intergenic | 40.0% | |
| GAGACATGAGATTCTCCAAA+AGG | - | chr5_1:16386014-16386033 | None:intergenic | 40.0% | |
| ! | TAAGCACAAGCATTGCAACA+AGG | - | chr5_1:16386048-16386067 | None:intergenic | 40.0% |
| ! | GGCTTATTTGGAATACCGTT+TGG | + | chr5_1:16386144-16386163 | Msa0720410:CDS | 40.0% |
| ! | TCAAAGTTTTCGTATGGCTC+AGG | + | chr5_1:16386267-16386286 | Msa0720410:CDS | 40.0% |
| CAAGATAAACCCATTTCGGT+TGG | + | chr5_1:16386426-16386445 | Msa0720410:intron | 40.0% | |
| !! | GGTGACATTGACTTGAAATC+TGG | + | chr5_1:16386452-16386471 | Msa0720410:intron | 40.0% |
| CATTTGTGAACCCAACATAC+TGG | + | chr5_1:16386697-16386716 | Msa0720410:CDS | 40.0% | |
| ! | CAGACATGGATTGTCTTCAA+TGG | + | chr5_1:16386742-16386761 | Msa0720410:CDS | 40.0% |
| CTCTTTCGCAAGTACAAACA+AGG | + | chr5_1:16386939-16386958 | Msa0720410:CDS | 40.0% | |
| TCAATCCCAATCATTGGTGC+TGG | + | chr5_1:16385878-16385897 | Msa0720410:CDS | 45.0% | |
| CAGATTCCAGCACCAATGAT+TGG | - | chr5_1:16385887-16385906 | None:intergenic | 45.0% | |
| !! | CAATCATTGGTGCTGGAATC+TGG | + | chr5_1:16385885-16385904 | Msa0720410:CDS | 45.0% |
| AACTTGACACATGTGTCTGC+TGG | - | chr5_1:16385923-16385942 | None:intergenic | 45.0% | |
| CAATGGCCAGTCATAATCCT+AGG | + | chr5_1:16385947-16385966 | Msa0720410:CDS | 45.0% | |
| CTCTTAGTTGTGTCTCTTGC+TGG | + | chr5_1:16385977-16385996 | Msa0720410:CDS | 45.0% | |
| !!! | CTGGTCTCATTGGTTCCTTT+TGG | + | chr5_1:16385996-16386015 | Msa0720410:CDS | 45.0% |
| GTGTACATGGTTACTCTTCG+TGG | + | chr5_1:16386097-16386116 | Msa0720410:CDS | 45.0% | |
| ATGGTTACTCTTCGTGGTCA+TGG | + | chr5_1:16386103-16386122 | Msa0720410:CDS | 45.0% | |
| ! | TAAACCCATTTCGGTTGGTC+TGG | + | chr5_1:16386431-16386450 | Msa0720410:intron | 45.0% |
| GTGTATGCACATTGTGTTGG+TGG | - | chr5_1:16386678-16386697 | None:intergenic | 45.0% | |
| TTACAACTGCGACTCATGCA+AGG | + | chr5_1:16386788-16386807 | Msa0720410:CDS | 45.0% | |
| ! | GCGAAAGAGATCCTCAGTTT+TGG | - | chr5_1:16386928-16386947 | None:intergenic | 45.0% |
| TCAATCCCAATCATTGGTGC+TGG | + | chr5_1:16385878-16385897 | Msa0720410:CDS | 45.0% | |
| CAGATTCCAGCACCAATGAT+TGG | - | chr5_1:16385887-16385906 | None:intergenic | 45.0% | |
| !! | CAATCATTGGTGCTGGAATC+TGG | + | chr5_1:16385885-16385904 | Msa0720410:CDS | 45.0% |
| AACTTGACACATGTGTCTGC+TGG | - | chr5_1:16385923-16385942 | None:intergenic | 45.0% | |
| CAATGGCCAGTCATAATCCT+AGG | + | chr5_1:16385947-16385966 | Msa0720410:CDS | 45.0% | |
| CTCTTAGTTGTGTCTCTTGC+TGG | + | chr5_1:16385977-16385996 | Msa0720410:CDS | 45.0% | |
| !!! | CTGGTCTCATTGGTTCCTTT+TGG | + | chr5_1:16385996-16386015 | Msa0720410:CDS | 45.0% |
| GTGTACATGGTTACTCTTCG+TGG | + | chr5_1:16386097-16386116 | Msa0720410:CDS | 45.0% | |
| ATGGTTACTCTTCGTGGTCA+TGG | + | chr5_1:16386103-16386122 | Msa0720410:CDS | 45.0% | |
| ! | TAAACCCATTTCGGTTGGTC+TGG | + | chr5_1:16386431-16386450 | Msa0720410:intron | 45.0% |
| GTGTATGCACATTGTGTTGG+TGG | - | chr5_1:16386678-16386697 | None:intergenic | 45.0% | |
| TTACAACTGCGACTCATGCA+AGG | + | chr5_1:16386788-16386807 | Msa0720410:CDS | 45.0% | |
| ! | GCGAAAGAGATCCTCAGTTT+TGG | - | chr5_1:16386928-16386947 | None:intergenic | 45.0% |
| ! | GTGTCTCTTGCTGGTCTCAT+TGG | + | chr5_1:16385986-16386005 | Msa0720410:CDS | 50.0% |
| TGCACGTCTTACACCAATGC+AGG | + | chr5_1:16386300-16386319 | Msa0720410:CDS | 50.0% | |
| GTCACCAGACCAACCGAAAT+GGG | - | chr5_1:16386438-16386457 | None:intergenic | 50.0% | |
| TGTCACCAGACCAACCGAAA+TGG | - | chr5_1:16386439-16386458 | None:intergenic | 50.0% | |
| GTGTGTTTCTCGTCTCAGGT+TGG | + | chr5_1:16386477-16386496 | Msa0720410:intron | 50.0% | |
| !! | CTCATGCAAGGCTGGTTTGT+TGG | + | chr5_1:16386800-16386819 | Msa0720410:CDS | 50.0% |
| ! | GTGTCTCTTGCTGGTCTCAT+TGG | + | chr5_1:16385986-16386005 | Msa0720410:CDS | 50.0% |
| TGCACGTCTTACACCAATGC+AGG | + | chr5_1:16386300-16386319 | Msa0720410:CDS | 50.0% | |
| GTCACCAGACCAACCGAAAT+GGG | - | chr5_1:16386438-16386457 | None:intergenic | 50.0% | |
| TGTCACCAGACCAACCGAAA+TGG | - | chr5_1:16386439-16386458 | None:intergenic | 50.0% | |
| GTGTGTTTCTCGTCTCAGGT+TGG | + | chr5_1:16386477-16386496 | Msa0720410:intron | 50.0% | |
| !! | CTCATGCAAGGCTGGTTTGT+TGG | + | chr5_1:16386800-16386819 | Msa0720410:CDS | 50.0% |
| ! | GGGAGTGTGTTTCTCGTCTC+AGG | + | chr5_1:16386473-16386492 | Msa0720410:intron | 55.0% |
| AACTGCGACTCATGCAAGGC+TGG | + | chr5_1:16386792-16386811 | Msa0720410:CDS | 55.0% | |
| ! | GGGAGTGTGTTTCTCGTCTC+AGG | + | chr5_1:16386473-16386492 | Msa0720410:intron | 55.0% |
| AACTGCGACTCATGCAAGGC+TGG | + | chr5_1:16386792-16386811 | Msa0720410:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_1 | gene | 16385824 | 16387102 | 16385824 | ID=Msa0720410;Name=Msa0720410 |
| chr5_1 | mRNA | 16385824 | 16387102 | 16385824 | ID=Msa0720410-mRNA-1;Parent=Msa0720410;Name=Msa0720410-mRNA-1;_AED=0.02;_eAED=0.02;_QI=0|1|0.5|1|1|1|2|131|269 |
| chr5_1 | exon | 16385824 | 16386321 | 16385824 | ID=Msa0720410-mRNA-1:exon:6232;Parent=Msa0720410-mRNA-1 |
| chr5_1 | exon | 16386660 | 16387102 | 16386660 | ID=Msa0720410-mRNA-1:exon:6233;Parent=Msa0720410-mRNA-1 |
| chr5_1 | CDS | 16385824 | 16386321 | 16385824 | ID=Msa0720410-mRNA-1:cds;Parent=Msa0720410-mRNA-1 |
| chr5_1 | CDS | 16386660 | 16386971 | 16386660 | ID=Msa0720410-mRNA-1:cds;Parent=Msa0720410-mRNA-1 |
| chr5_1 | three_prime_UTR | 16386972 | 16387102 | 16386972 | ID=Msa0720410-mRNA-1:three_prime_utr;Parent=Msa0720410-mRNA-1 |
| Gene Sequence |
| Protein sequence |
