Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0178350 | XP_003590737.1 | 53.153 | 111 | 51 | 1 | 126 | 235 | 266 | 376 | 4.21e-26 | 120 |
| Msa0178350 | XP_003590737.1 | 93.132 | 364 | 21 | 3 | 1 | 364 | 1 | 360 | 0.0 | 692 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0178350 | G7I2Q0 | 53.153 | 111 | 51 | 1 | 126 | 235 | 266 | 376 | 2.01e-26 | 120 |
| Msa0178350 | G7I2Q0 | 93.132 | 364 | 21 | 3 | 1 | 364 | 1 | 360 | 0.0 | 692 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0006700 | Msa0178350 | 0.810425 | 1.160105e-50 | -8.615850e-47 |
| Msa0013050 | Msa0178350 | -0.809859 | 1.536148e-50 | -8.615850e-47 |
| Msa0014410 | Msa0178350 | 0.831462 | 1.646973e-55 | -8.615850e-47 |
| Msa0015100 | Msa0178350 | 0.833569 | 4.947031e-56 | -8.615850e-47 |
| Msa0020630 | Msa0178350 | 0.804040 | 2.614016e-49 | -8.615850e-47 |
| Msa0044710 | Msa0178350 | 0.840861 | 6.735922e-58 | -8.615850e-47 |
| Msa0049330 | Msa0178350 | 0.824070 | 9.852594e-54 | -8.615850e-47 |
| Msa0049770 | Msa0178350 | 0.829587 | 4.736329e-55 | -8.615850e-47 |
| Msa0050720 | Msa0178350 | 0.826555 | 2.544187e-54 | -8.615850e-47 |
| Msa0050770 | Msa0178350 | 0.833206 | 6.091449e-56 | -8.615850e-47 |
| Msa0054730 | Msa0178350 | -0.809590 | 1.754862e-50 | -8.615850e-47 |
| Msa0064550 | Msa0178350 | 0.815464 | 9.122248e-52 | -8.615850e-47 |
| Msa0068410 | Msa0178350 | 0.805495 | 1.298950e-49 | -8.615850e-47 |
| Msa0071550 | Msa0178350 | 0.816142 | 6.442174e-52 | -8.615850e-47 |
| Msa0071910 | Msa0178350 | -0.835044 | 2.110291e-56 | -8.615850e-47 |
| Msa0088550 | Msa0178350 | 0.818177 | 2.245399e-52 | -8.615850e-47 |
| Msa0092960 | Msa0178350 | 0.837257 | 5.781673e-57 | -8.615850e-47 |
| Msa0105340 | Msa0178350 | 0.801653 | 8.136627e-49 | -8.615850e-47 |
| Msa0106370 | Msa0178350 | -0.850016 | 2.230274e-60 | -8.615850e-47 |
| Msa0108070 | Msa0178350 | 0.802995 | 4.306301e-49 | -8.615850e-47 |
| Msa0109490 | Msa0178350 | 0.832248 | 1.053356e-55 | -8.615850e-47 |
| Msa0111310 | Msa0178350 | 0.925930 | 9.397325e-91 | -8.615850e-47 |
| Msa0119850 | Msa0178350 | 0.816688 | 4.861876e-52 | -8.615850e-47 |
| Msa0135360 | Msa0178350 | 0.815849 | 7.488740e-52 | -8.615850e-47 |
| Msa0153440 | Msa0178350 | 0.809758 | 1.615341e-50 | -8.615850e-47 |
| Msa0159750 | Msa0178350 | 0.802406 | 5.694777e-49 | -8.615850e-47 |
| Msa0164360 | Msa0178350 | 0.812069 | 5.103276e-51 | -8.615850e-47 |
| Msa0178350 | Msa0182930 | 0.822595 | 2.177499e-53 | -8.615850e-47 |
| Msa0178350 | Msa0185640 | -0.883259 | 5.218440e-71 | -8.615850e-47 |
| Msa0178350 | Msa0191630 | 0.819092 | 1.392151e-52 | -8.615850e-47 |
| Msa0178350 | Msa0198440 | 0.851995 | 6.168332e-61 | -8.615850e-47 |
| Msa0178350 | Msa0199730 | 0.846254 | 2.438139e-59 | -8.615850e-47 |
| Msa0178350 | Msa0200950 | -0.807359 | 5.252845e-50 | -8.615850e-47 |
| Msa0178350 | Msa0208630 | 0.818492 | 1.905970e-52 | -8.615850e-47 |
| Msa0178350 | Msa0223290 | 0.801087 | 1.062338e-48 | -8.615850e-47 |
| Msa0178350 | Msa0223380 | 0.828805 | 7.330064e-55 | -8.615850e-47 |
| Msa0178350 | Msa0223410 | -0.808323 | 3.276477e-50 | -8.615850e-47 |
| Msa0178350 | Msa0226620 | -0.809384 | 1.943511e-50 | -8.615850e-47 |
| Msa0178350 | Msa0240780 | 0.836132 | 1.119366e-56 | -8.615850e-47 |
| Msa0178350 | Msa0243470 | 0.808490 | 3.019591e-50 | -8.615850e-47 |
| Msa0178350 | Msa0245870 | 0.816825 | 4.528985e-52 | -8.615850e-47 |
| Msa0178350 | Msa0258670 | -0.826177 | 3.130127e-54 | -8.615850e-47 |
| Msa0178350 | Msa0260270 | -0.816753 | 4.699951e-52 | -8.615850e-47 |
| Msa0178350 | Msa0260910 | 0.815161 | 1.065475e-51 | -8.615850e-47 |
| Msa0178350 | Msa0265820 | 0.813018 | 3.164471e-51 | -8.615850e-47 |
| Msa0178350 | Msa0265980 | -0.812720 | 3.679203e-51 | -8.615850e-47 |
| Msa0178350 | Msa0269360 | 0.800694 | 1.278191e-48 | -8.615850e-47 |
| Msa0178350 | Msa0278670 | 0.851609 | 7.936669e-61 | -8.615850e-47 |
| Msa0178350 | Msa0280660 | -0.813614 | 2.340873e-51 | -8.615850e-47 |
| Msa0178350 | Msa0281940 | 0.805889 | 1.073491e-49 | -8.615850e-47 |
| Msa0178350 | Msa0282170 | 0.811063 | 8.442808e-51 | -8.615850e-47 |
| Msa0178350 | Msa0288240 | 0.844757 | 6.202329e-59 | -8.615850e-47 |
| Msa0178350 | Msa0288330 | 0.850473 | 1.660278e-60 | -8.615850e-47 |
| Msa0178350 | Msa0296760 | 0.808447 | 3.083869e-50 | -8.615850e-47 |
| Msa0178350 | Msa0302990 | -0.806074 | 9.814609e-50 | -8.615850e-47 |
| Msa0178350 | Msa0318070 | 0.840356 | 9.134710e-58 | -8.615850e-47 |
| Msa0178350 | Msa0318250 | 0.802101 | 6.582781e-49 | -8.615850e-47 |
| Msa0178350 | Msa0318270 | 0.816626 | 5.017968e-52 | -8.615850e-47 |
| Msa0178350 | Msa0318310 | 0.821093 | 4.849015e-53 | -8.615850e-47 |
| Msa0178350 | Msa0318610 | 0.809590 | 1.755408e-50 | -8.615850e-47 |
| Msa0178350 | Msa0326670 | 0.865123 | 7.418710e-65 | -8.615850e-47 |
| Msa0178350 | Msa0327860 | 0.824245 | 8.961556e-54 | -8.615850e-47 |
| Msa0178350 | Msa0331920 | 0.821205 | 4.569610e-53 | -8.615850e-47 |
| Msa0178350 | Msa0342340 | -0.875726 | 2.455308e-68 | -8.615850e-47 |
| Msa0178350 | Msa0344830 | 0.844076 | 9.455458e-59 | -8.615850e-47 |
| Msa0178350 | Msa0358170 | 0.804743 | 1.865499e-49 | -8.615850e-47 |
| Msa0178350 | Msa0362740 | 0.810171 | 1.315923e-50 | -8.615850e-47 |
| Msa0178350 | Msa0363460 | 0.824120 | 9.586905e-54 | -8.615850e-47 |
| Msa0178350 | Msa0366470 | 0.851749 | 7.247857e-61 | -8.615850e-47 |
| Msa0178350 | Msa0366870 | 0.823275 | 1.512377e-53 | -8.615850e-47 |
| Msa0178350 | Msa0373930 | 0.801439 | 8.999400e-49 | -8.615850e-47 |
| Msa0178350 | Msa0377280 | 0.810002 | 1.431077e-50 | -8.615850e-47 |
| Msa0178350 | Msa0380040 | 0.822313 | 2.532662e-53 | -8.615850e-47 |
| Msa0178350 | Msa0389060 | 0.806882 | 6.628667e-50 | -8.615850e-47 |
| Msa0178350 | Msa0389360 | 0.863879 | 1.815652e-64 | -8.615850e-47 |
| Msa0178350 | Msa0389810 | 0.836474 | 9.162733e-57 | -8.615850e-47 |
| Msa0178350 | Msa0401340 | 0.803416 | 3.521938e-49 | -8.615850e-47 |
| Msa0178350 | Msa0404690 | 0.813034 | 3.138892e-51 | -8.615850e-47 |
| Msa0178350 | Msa0405660 | -0.800270 | 1.559568e-48 | -8.615850e-47 |
| Msa0178350 | Msa0411000 | 0.812217 | 4.736922e-51 | -8.615850e-47 |
| Msa0178350 | Msa0414070 | 0.814759 | 1.307927e-51 | -8.615850e-47 |
| Msa0178350 | Msa0419990 | 0.827371 | 1.623551e-54 | -8.615850e-47 |
| Msa0178350 | Msa0421780 | -0.802841 | 4.633010e-49 | -8.615850e-47 |
| Msa0178350 | Msa0429290 | 0.807342 | 5.298254e-50 | -8.615850e-47 |
| Msa0178350 | Msa0431520 | 0.810649 | 1.038053e-50 | -8.615850e-47 |
| Msa0178350 | Msa0431830 | 0.801084 | 1.064076e-48 | -8.615850e-47 |
| Msa0178350 | Msa0435010 | 0.806250 | 9.013275e-50 | -8.615850e-47 |
| Msa0178350 | Msa0438050 | 0.805522 | 1.282039e-49 | -8.615850e-47 |
| Msa0178350 | Msa0442850 | 0.846149 | 2.603421e-59 | -8.615850e-47 |
| Msa0178350 | Msa0448120 | 0.833007 | 6.826909e-56 | -8.615850e-47 |
| Msa0178350 | Msa0449760 | 0.828543 | 8.480816e-55 | -8.615850e-47 |
| Msa0178350 | Msa0455230 | 0.820269 | 7.499829e-53 | -8.615850e-47 |
| Msa0178350 | Msa0457010 | 0.805042 | 1.615404e-49 | -8.615850e-47 |
| Msa0178350 | Msa0462190 | 0.803354 | 3.627929e-49 | -8.615850e-47 |
| Msa0178350 | Msa0462590 | 0.833664 | 4.683668e-56 | -8.615850e-47 |
| Msa0178350 | Msa0465680 | -0.836661 | 8.208507e-57 | -8.615850e-47 |
| Msa0178350 | Msa0465930 | 0.832541 | 8.914660e-56 | -8.615850e-47 |
| Msa0178350 | Msa0465970 | 0.822789 | 1.962740e-53 | -8.615850e-47 |
| Msa0178350 | Msa0467900 | -0.801769 | 7.700945e-49 | -8.615850e-47 |
| Msa0178350 | Msa0468130 | 0.834221 | 3.397876e-56 | -8.615850e-47 |
| Msa0178350 | Msa0473240 | 0.826500 | 2.621595e-54 | -8.615850e-47 |
| Msa0178350 | Msa0475580 | 0.822856 | 1.893242e-53 | -8.615850e-47 |
| Msa0178350 | Msa0479100 | 0.801983 | 6.961413e-49 | -8.615850e-47 |
| Msa0178350 | Msa0482190 | -0.835811 | 1.350438e-56 | -8.615850e-47 |
| Msa0178350 | Msa0485500 | -0.831701 | 1.437900e-55 | -8.615850e-47 |
| Msa0178350 | Msa0501470 | 0.814157 | 1.777457e-51 | -8.615850e-47 |
| Msa0178350 | Msa0511720 | -0.820549 | 6.468180e-53 | -8.615850e-47 |
| Msa0178350 | Msa0516310 | 0.812717 | 3.683877e-51 | -8.615850e-47 |
| Msa0178350 | Msa0519220 | 0.808483 | 3.029847e-50 | -8.615850e-47 |
| Msa0178350 | Msa0520220 | 0.802425 | 5.645318e-49 | -8.615850e-47 |
| Msa0178350 | Msa0524890 | -0.835297 | 1.821657e-56 | -8.615850e-47 |
| Msa0178350 | Msa0527250 | 0.806738 | 7.109234e-50 | -8.615850e-47 |
| Msa0178350 | Msa0528970 | 0.818135 | 2.295514e-52 | -8.615850e-47 |
| Msa0178350 | Msa0530950 | 0.809282 | 2.043542e-50 | -8.615850e-47 |
| Msa0178350 | Msa0540070 | 0.879956 | 8.158385e-70 | -8.615850e-47 |
| Msa0178350 | Msa0543900 | 0.865865 | 4.330017e-65 | -8.615850e-47 |
| Msa0178350 | Msa0548280 | -0.801047 | 1.082685e-48 | -8.615850e-47 |
| Msa0178350 | Msa0549740 | 0.803447 | 3.470548e-49 | -8.615850e-47 |
| Msa0178350 | Msa0553220 | -0.829263 | 5.675723e-55 | -8.615850e-47 |
| Msa0178350 | Msa0553460 | 0.828567 | 8.368653e-55 | -8.615850e-47 |
| Msa0178350 | Msa0558690 | 0.808939 | 2.420123e-50 | -8.615850e-47 |
| Msa0178350 | Msa0564510 | 0.860303 | 2.268828e-63 | -8.615850e-47 |
| Msa0178350 | Msa0568240 | 0.811585 | 6.505344e-51 | -8.615850e-47 |
| Msa0178350 | Msa0576990 | -0.818965 | 1.488049e-52 | -8.615850e-47 |
| Msa0178350 | Msa0577230 | 0.813881 | 2.045109e-51 | -8.615850e-47 |
| Msa0178350 | Msa0581920 | 0.818545 | 1.853740e-52 | -8.615850e-47 |
| Msa0178350 | Msa0582110 | 0.806470 | 8.098886e-50 | -8.615850e-47 |
| Msa0178350 | Msa0585000 | -0.853616 | 2.124486e-61 | -8.615850e-47 |
| Msa0178350 | Msa0587690 | 0.817883 | 2.617583e-52 | -8.615850e-47 |
| Msa0178350 | Msa0592540 | 0.814632 | 1.395391e-51 | -8.615850e-47 |
| Msa0178350 | Msa0593810 | 0.821035 | 5.000318e-53 | -8.615850e-47 |
| Msa0178350 | Msa0599770 | 0.862712 | 4.174276e-64 | -8.615850e-47 |
| Msa0178350 | Msa0600820 | 0.832239 | 1.058768e-55 | -8.615850e-47 |
| Msa0178350 | Msa0605170 | 0.800746 | 1.246964e-48 | -8.615850e-47 |
| Msa0178350 | Msa0607540 | 0.827813 | 1.271520e-54 | -8.615850e-47 |
| Msa0178350 | Msa0613480 | 0.808365 | 3.210596e-50 | -8.615850e-47 |
| Msa0178350 | Msa0617370 | 0.818143 | 2.285964e-52 | -8.615850e-47 |
| Msa0178350 | Msa0617830 | 0.806918 | 6.512754e-50 | -8.615850e-47 |
| Msa0178350 | Msa0628100 | 0.800704 | 1.272052e-48 | -8.615850e-47 |
| Msa0178350 | Msa0638280 | 0.813125 | 2.998255e-51 | -8.615850e-47 |
| Msa0178350 | Msa0638320 | 0.813237 | 2.833950e-51 | -8.615850e-47 |
| Msa0178350 | Msa0640380 | 0.869086 | 4.028039e-66 | -8.615850e-47 |
| Msa0178350 | Msa0647450 | -0.837849 | 4.077051e-57 | -8.615850e-47 |
| Msa0178350 | Msa0647830 | 0.824290 | 8.744308e-54 | -8.615850e-47 |
| Msa0178350 | Msa0649310 | 0.800005 | 1.765191e-48 | -8.615850e-47 |
| Msa0178350 | Msa0651400 | 0.845603 | 3.664465e-59 | -8.615850e-47 |
| Msa0178350 | Msa0656270 | 0.808722 | 2.693693e-50 | -8.615850e-47 |
| Msa0178350 | Msa0656680 | 0.801672 | 8.060967e-49 | -8.615850e-47 |
| Msa0178350 | Msa0660880 | -0.800502 | 1.398560e-48 | -8.615850e-47 |
| Msa0178350 | Msa0661890 | 0.833295 | 5.787579e-56 | -8.615850e-47 |
| Msa0178350 | Msa0662650 | 0.814682 | 1.360215e-51 | -8.615850e-47 |
| Msa0178350 | Msa0672120 | 0.853933 | 1.721566e-61 | -8.615850e-47 |
| Msa0178350 | Msa0672810 | 0.816239 | 6.127924e-52 | -8.615850e-47 |
| Msa0178350 | Msa0672850 | 0.810024 | 1.415508e-50 | -8.615850e-47 |
| Msa0178350 | Msa0677270 | 0.807471 | 4.972920e-50 | -8.615850e-47 |
| Msa0178350 | Msa0678820 | 0.871573 | 6.166223e-67 | -8.615850e-47 |
| Msa0178350 | Msa0688550 | 0.829700 | 4.444410e-55 | -8.615850e-47 |
| Msa0178350 | Msa0690440 | 0.820438 | 6.857889e-53 | -8.615850e-47 |
| Msa0178350 | Msa0699920 | -0.802243 | 6.154702e-49 | -8.615850e-47 |
| Msa0178350 | Msa0700070 | 0.803390 | 3.566767e-49 | -8.615850e-47 |
| Msa0178350 | Msa0708860 | 0.812718 | 3.682708e-51 | -8.615850e-47 |
| Msa0178350 | Msa0709660 | 0.812828 | 3.482590e-51 | -8.615850e-47 |
| Msa0178350 | Msa0714380 | 0.801231 | 9.928721e-49 | -8.615850e-47 |
| Msa0178350 | Msa0714600 | 0.836680 | 8.117448e-57 | -8.615850e-47 |
| Msa0178350 | Msa0715720 | 0.830367 | 3.057275e-55 | -8.615850e-47 |
| Msa0178350 | Msa0716740 | -0.806282 | 8.871236e-50 | -8.615850e-47 |
| Msa0178350 | Msa0722930 | 0.858965 | 5.734341e-63 | -8.615850e-47 |
| Msa0178350 | Msa0723140 | 0.862248 | 5.796050e-64 | -8.615850e-47 |
| Msa0178350 | Msa0739680 | 0.833917 | 4.047751e-56 | -8.615850e-47 |
| Msa0178350 | Msa0743260 | 0.802819 | 4.681961e-49 | -8.615850e-47 |
| Msa0178350 | Msa0744500 | 0.802370 | 5.793056e-49 | -8.615850e-47 |
| Msa0178350 | Msa0750380 | 0.834416 | 3.034839e-56 | -8.615850e-47 |
| Msa0178350 | Msa0756310 | 0.810003 | 1.430183e-50 | -8.615850e-47 |
| Msa0178350 | Msa0765130 | 0.800066 | 1.715686e-48 | -8.615850e-47 |
| Msa0178350 | Msa0773610 | 0.826825 | 2.192644e-54 | -8.615850e-47 |
| Msa0178350 | Msa0775260 | 0.802292 | 6.013064e-49 | -8.615850e-47 |
| Msa0178350 | Msa0782470 | 0.814349 | 1.611690e-51 | -8.615850e-47 |
| Msa0178350 | Msa0782490 | 0.813658 | 2.289600e-51 | -8.615850e-47 |
| Msa0178350 | Msa0788360 | 0.800033 | 1.741985e-48 | -8.615850e-47 |
| Msa0178350 | Msa0789270 | 0.831621 | 1.505062e-55 | -8.615850e-47 |
| Msa0178350 | Msa0789280 | 0.833954 | 3.962264e-56 | -8.615850e-47 |
| Msa0178350 | Msa0789290 | 0.836922 | 7.044510e-57 | -8.615850e-47 |
| Msa0178350 | Msa0789300 | 0.837936 | 3.873459e-57 | -8.615850e-47 |
| Msa0178350 | Msa0801360 | 0.804498 | 2.098642e-49 | -8.615850e-47 |
| Msa0178350 | Msa0806210 | 0.804189 | 2.434308e-49 | -8.615850e-47 |
| Msa0178350 | Msa0812760 | 0.831160 | 1.954246e-55 | -8.615850e-47 |
| Msa0178350 | Msa0826650 | 0.801008 | 1.102522e-48 | -8.615850e-47 |
| Msa0178350 | Msa0828570 | 0.852297 | 5.065114e-61 | -8.615850e-47 |
| Msa0178350 | Msa0830720 | 0.815562 | 8.676360e-52 | -8.615850e-47 |
| Msa0178350 | Msa0835730 | 0.810352 | 1.203156e-50 | -8.615850e-47 |
| Msa0178350 | Msa0835920 | 0.812681 | 3.751220e-51 | -8.615850e-47 |
| Msa0178350 | Msa0837510 | -0.800656 | 1.300847e-48 | -8.615850e-47 |
| Msa0178350 | Msa0839330 | 0.827605 | 1.426405e-54 | -8.615850e-47 |
| Msa0178350 | Msa0841420 | 0.804473 | 2.124035e-49 | -8.615850e-47 |
| Msa0178350 | Msa0842210 | 0.806536 | 7.842078e-50 | -8.615850e-47 |
| Msa0178350 | Msa0842970 | 0.873939 | 9.963621e-68 | -8.615850e-47 |
| Msa0178350 | Msa0843280 | 0.840527 | 8.243575e-58 | -8.615850e-47 |
| Msa0178350 | Msa0844900 | 0.820032 | 8.496344e-53 | -8.615850e-47 |
| Msa0178350 | Msa0845000 | 0.832775 | 7.797031e-56 | -8.615850e-47 |
| Msa0178350 | Msa0847200 | 0.852416 | 4.683524e-61 | -8.615850e-47 |
| Msa0178350 | Msa0853170 | 0.808791 | 2.604000e-50 | -8.615850e-47 |
| Msa0178350 | Msa0860470 | 0.802153 | 6.422988e-49 | -8.615850e-47 |
| Msa0178350 | Msa0864690 | 0.805980 | 1.027194e-49 | -8.615850e-47 |
| Msa0178350 | Msa0883350 | 0.813686 | 2.257978e-51 | -8.615850e-47 |
| Msa0178350 | Msa0883450 | 0.808359 | 3.219620e-50 | -8.615850e-47 |
| Msa0178350 | Msa0896210 | 0.811350 | 7.314068e-51 | -8.615850e-47 |
| Msa0178350 | Msa0902980 | 0.823301 | 1.491390e-53 | -8.615850e-47 |
| Msa0178350 | Msa0909710 | 0.805371 | 1.379038e-49 | -8.615850e-47 |
| Msa0178350 | Msa0935370 | 0.832937 | 7.109232e-56 | -8.615850e-47 |
| Msa0178350 | Msa0935850 | 0.824489 | 7.850379e-54 | -8.615850e-47 |
| Msa0178350 | Msa0935970 | 0.805345 | 1.396057e-49 | -8.615850e-47 |
| Msa0178350 | Msa0938420 | 0.869392 | 3.205011e-66 | -8.615850e-47 |
| Msa0178350 | Msa0944550 | 0.814658 | 1.377356e-51 | -8.615850e-47 |
| Msa0178350 | Msa0950620 | 0.800797 | 1.217795e-48 | -8.615850e-47 |
| Msa0178350 | Msa0951720 | 0.848847 | 4.721590e-60 | -8.615850e-47 |
| Msa0178350 | Msa0961420 | -0.816945 | 4.256471e-52 | -8.615850e-47 |
| Msa0178350 | Msa0962190 | -0.808633 | 2.814622e-50 | -8.615850e-47 |
| Msa0178350 | Msa0964680 | 0.822437 | 2.370630e-53 | -8.615850e-47 |
| Msa0178350 | Msa0982270 | 0.850117 | 2.089095e-60 | -8.615850e-47 |
| Msa0178350 | Msa0988500 | 0.826675 | 2.382020e-54 | -8.615850e-47 |
| Msa0178350 | Msa0992490 | -0.825516 | 4.491363e-54 | -8.615850e-47 |
| Msa0178350 | Msa1004210 | 0.800557 | 1.362867e-48 | -8.615850e-47 |
| Msa0178350 | Msa1005420 | 0.829556 | 4.817638e-55 | -8.615850e-47 |
| Msa0178350 | Msa1012920 | 0.815380 | 9.522548e-52 | -8.615850e-47 |
| Msa0178350 | Msa1021340 | 0.845914 | 3.016015e-59 | -8.615850e-47 |
| Msa0178350 | Msa1034360 | 0.847016 | 1.509160e-59 | -8.615850e-47 |
| Msa0178350 | Msa1036390 | 0.827043 | 1.944992e-54 | -8.615850e-47 |
| Msa0178350 | Msa1037710 | 0.818558 | 1.840766e-52 | -8.615850e-47 |
| Msa0178350 | Msa1041080 | 0.808221 | 3.444708e-50 | -8.615850e-47 |
| Msa0178350 | Msa1046610 | 0.818242 | 2.171633e-52 | -8.615850e-47 |
| Msa0178350 | Msa1054410 | 0.866894 | 2.041084e-65 | -8.615850e-47 |
| Msa0178350 | Msa1072460 | -0.820547 | 6.476799e-53 | -8.615850e-47 |
| Msa0178350 | Msa1074060 | 0.825666 | 4.138575e-54 | -8.615850e-47 |
| Msa0178350 | Msa1075080 | -0.830341 | 3.101908e-55 | -8.615850e-47 |
| Msa0178350 | Msa1075220 | -0.816546 | 5.231031e-52 | -8.615850e-47 |
| Msa0178350 | Msa1076680 | 0.825812 | 3.822765e-54 | -8.615850e-47 |
| Msa0178350 | Msa1087530 | 0.820964 | 5.191442e-53 | -8.615850e-47 |
| Msa0178350 | Msa1095480 | 0.814485 | 1.503801e-51 | -8.615850e-47 |
| Msa0178350 | Msa1105270 | 0.802246 | 6.144910e-49 | -8.615850e-47 |
| Msa0178350 | Msa1116130 | -0.804505 | 2.092169e-49 | -8.615850e-47 |
| Msa0178350 | Msa1124540 | -0.808978 | 2.374819e-50 | -8.615850e-47 |
| Msa0178350 | Msa1130350 | 0.820056 | 8.392199e-53 | -8.615850e-47 |
| Msa0178350 | Msa1131940 | -0.819291 | 1.254245e-52 | -8.615850e-47 |
| Msa0178350 | Msa1141250 | -0.879944 | 8.234561e-70 | -8.615850e-47 |
| Msa0178350 | Msa1142850 | -0.822249 | 2.620637e-53 | -8.615850e-47 |
| Msa0178350 | Msa1148720 | 0.830479 | 2.869796e-55 | -8.615850e-47 |
| Msa0178350 | Msa1148750 | 0.824205 | 9.157854e-54 | -8.615850e-47 |
| Msa0178350 | Msa1182830 | 0.831243 | 1.864008e-55 | -8.615850e-47 |
| Msa0178350 | Msa1184050 | 0.808007 | 3.826714e-50 | -8.615850e-47 |
| Msa0178350 | Msa1187520 | 0.826344 | 2.856161e-54 | -8.615850e-47 |
| Msa0178350 | Msa1199560 | 0.800430 | 1.446892e-48 | -8.615850e-47 |
| Msa0178350 | Msa1204490 | 0.802913 | 4.477144e-49 | -8.615850e-47 |
| Msa0178350 | Msa1204980 | -0.880423 | 5.557308e-70 | -8.615850e-47 |
| Msa0178350 | Msa1205010 | -0.884337 | 2.090568e-71 | -8.615850e-47 |
| Msa0178350 | Msa1205130 | 0.803662 | 3.132277e-49 | -8.615850e-47 |
| Msa0178350 | Msa1206020 | 0.805623 | 1.220525e-49 | -8.615850e-47 |
| Msa0178350 | Msa1207480 | -0.813920 | 2.005070e-51 | -8.615850e-47 |
| Msa0178350 | Msa1208180 | 0.815744 | 7.902566e-52 | -8.615850e-47 |
| Msa0178350 | Msa1208340 | 0.828792 | 7.384487e-55 | -8.615850e-47 |
| Msa0178350 | Msa1208760 | 0.812283 | 4.583545e-51 | -8.615850e-47 |
| Msa0178350 | Msa1211390 | 0.809963 | 1.459476e-50 | -8.615850e-47 |
| Msa0178350 | Msa1217430 | -0.808592 | 2.871855e-50 | -8.615850e-47 |
| Msa0178350 | Msa1217810 | 0.816896 | 4.366454e-52 | -8.615850e-47 |
| Msa0178350 | Msa1221200 | -0.800097 | 1.690843e-48 | -8.615850e-47 |
| Msa0178350 | Msa1228310 | 0.804276 | 2.334650e-49 | -8.615850e-47 |
| Msa0178350 | Msa1233500 | 0.811360 | 7.279466e-51 | -8.615850e-47 |
| Msa0178350 | Msa1237260 | 0.815975 | 7.018343e-52 | -8.615850e-47 |
| Msa0178350 | Msa1241820 | 0.817325 | 3.496930e-52 | -8.615850e-47 |
| Msa0178350 | Msa1246740 | 0.812679 | 3.754201e-51 | -8.615850e-47 |
| Msa0178350 | Msa1252070 | 0.887836 | 1.005670e-72 | -8.615850e-47 |
| Msa0178350 | Msa1256540 | -0.875060 | 4.150068e-68 | -8.615850e-47 |
| Msa0178350 | Msa1258380 | -0.835386 | 1.729963e-56 | -8.615850e-47 |
| Msa0178350 | Msa1271200 | 0.820711 | 5.936727e-53 | -8.615850e-47 |
| Msa0178350 | Msa1272130 | 0.808065 | 3.718916e-50 | -8.615850e-47 |
| Msa0178350 | Msa1275770 | 0.800886 | 1.167892e-48 | -8.615850e-47 |
| Msa0178350 | Msa1279210 | 0.826730 | 2.310991e-54 | -8.615850e-47 |
| Msa0178350 | Msa1280130 | 0.836179 | 1.089215e-56 | -8.615850e-47 |
| Msa0178350 | Msa1282920 | 0.819772 | 9.743826e-53 | -8.615850e-47 |
| Msa0178350 | Msa1292730 | 0.821783 | 3.360923e-53 | -8.615850e-47 |
| Msa0178350 | Msa1296880 | 0.816894 | 4.369618e-52 | -8.615850e-47 |
| Msa0178350 | Msa1296960 | -0.880133 | 7.055710e-70 | -8.615850e-47 |
| Msa0178350 | Msa1307740 | 0.828499 | 8.688028e-55 | -8.615850e-47 |
| Msa0178350 | Msa1308480 | 0.817753 | 2.800114e-52 | -8.615850e-47 |
| Msa0178350 | Msa1313050 | 0.844888 | 5.717871e-59 | -8.615850e-47 |
| Msa0178350 | Msa1316560 | -0.804903 | 1.727873e-49 | -8.615850e-47 |
| Msa0178350 | Msa1322190 | 0.830837 | 2.345609e-55 | -8.615850e-47 |
| Msa0178350 | Msa1326400 | 0.831272 | 1.834038e-55 | -8.615850e-47 |
| Msa0178350 | Msa1335860 | 0.813136 | 2.981259e-51 | -8.615850e-47 |
| Msa0178350 | Msa1335970 | -0.842740 | 2.149620e-58 | -8.615850e-47 |
| Msa0178350 | Msa1347290 | 0.813860 | 2.066698e-51 | -8.615850e-47 |
| Msa0178350 | Msa1347620 | 0.810230 | 1.278263e-50 | -8.615850e-47 |
| Msa0178350 | Msa1358870 | -0.802150 | 6.430654e-49 | -8.615850e-47 |
| Msa0178350 | Msa1369530 | 0.840661 | 7.600209e-58 | -8.615850e-47 |
| Msa0178350 | Msa1371580 | 0.806711 | 7.204371e-50 | -8.615850e-47 |
| Msa0178350 | Msa1379710 | 0.804032 | 2.624035e-49 | -8.615850e-47 |
| Msa0178350 | Msa1386430 | 0.801931 | 7.133592e-49 | -8.615850e-47 |
| Msa0178350 | Msa1393330 | 0.806519 | 7.909392e-50 | -8.615850e-47 |
| Msa0178350 | Msa1397970 | 0.819385 | 1.193984e-52 | -8.615850e-47 |
| Msa0178350 | Msa1424510 | 0.809703 | 1.659971e-50 | -8.615850e-47 |
| Msa0178350 | Msa1427830 | 0.832273 | 1.038659e-55 | -8.615850e-47 |
| Msa0178350 | Msa1434660 | 0.808128 | 3.605846e-50 | -8.615850e-47 |
| Msa0178350 | Msa1438820 | 0.820981 | 5.146122e-53 | -8.615850e-47 |
| Msa0178350 | Msa1440610 | 0.835465 | 1.652284e-56 | -8.615850e-47 |
| Msa0178350 | Msa1441200 | 0.821787 | 3.354032e-53 | -8.615850e-47 |
| Msa0178350 | Msa1444060 | -0.810680 | 1.022008e-50 | -8.615850e-47 |
| Msa0178350 | Msa1444250 | -0.825889 | 3.664045e-54 | -8.615850e-47 |
| Msa0178350 | Msa1450020 | 0.801268 | 9.754081e-49 | -8.615850e-47 |
| Msa0178350 | Msa1451620 | -0.828980 | 6.648541e-55 | -8.615850e-47 |
| Msa0178350 | Msa1454110 | 0.814359 | 1.604008e-51 | -8.615850e-47 |
| Msa0178350 | Msa1458550 | 0.826411 | 2.753259e-54 | -8.615850e-47 |
| Msa0178350 | Msa1460310 | -0.805813 | 1.113505e-49 | -8.615850e-47 |
| Msa0178350 | Msa1461250 | -0.835011 | 2.150784e-56 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0178350 | MtrunA17_Chr1g0186111 | 93.132 | 364 | 21 | 3 | 1 | 364 | 1 | 360 | 0.0 | 692 |
| Msa0178350 | MtrunA17_Chr1g0186111 | 53.153 | 111 | 51 | 1 | 126 | 235 | 266 | 376 | 3.87e-30 | 120 |
| Msa0178350 | MtrunA17_Chr7g0262061 | 54.545 | 143 | 62 | 2 | 96 | 235 | 187 | 329 | 3.43e-36 | 136 |
| Msa0178350 | MtrunA17_Chr7g0262061 | 59.140 | 93 | 36 | 1 | 274 | 364 | 221 | 313 | 3.22e-30 | 120 |
| Msa0178350 | MtrunA17_Chr7g0262541 | 49.032 | 155 | 68 | 3 | 96 | 239 | 190 | 344 | 1.98e-35 | 134 |
| Msa0178350 | MtrunA17_Chr7g0262541 | 63.529 | 85 | 31 | 0 | 280 | 364 | 240 | 324 | 9.58e-32 | 124 |
| Msa0178350 | MtrunA17_Chr4g0063891 | 50.000 | 94 | 46 | 1 | 136 | 228 | 165 | 258 | 1.66e-22 | 97.1 |
| Msa0178350 | MtrunA17_Chr4g0063891 | 41.905 | 105 | 60 | 1 | 260 | 364 | 146 | 249 | 3.17e-21 | 93.6 |
| Msa0178350 | MtrunA17_Chr2g0333081 | 44.444 | 108 | 59 | 1 | 136 | 242 | 142 | 249 | 1.93e-22 | 96.7 |
| Msa0178350 | MtrunA17_Chr2g0333081 | 40.659 | 91 | 53 | 1 | 274 | 364 | 137 | 226 | 3.32e-14 | 72.8 |
| Msa0178350 | MtrunA17_Chr5g0411051 | 41.837 | 98 | 56 | 1 | 133 | 229 | 122 | 219 | 3.51e-19 | 86.7 |
| Msa0178350 | MtrunA17_Chr5g0411051 | 40.000 | 85 | 51 | 0 | 280 | 364 | 125 | 209 | 2.21e-16 | 78.6 |
| Msa0178350 | MtrunA17_Chr3g0104511 | 27.941 | 136 | 90 | 1 | 227 | 362 | 357 | 484 | 3.79e-11 | 65.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0178350 | AT1G04530.1 | 33.234 | 337 | 179 | 8 | 20 | 340 | 2 | 308 | 8.21e-45 | 158 |
| Msa0178350 | AT1G04530.1 | 45.652 | 92 | 49 | 1 | 273 | 364 | 117 | 207 | 2.43e-19 | 88.6 |
| Msa0178350 | AT1G04530.1 | 31.469 | 143 | 77 | 1 | 111 | 232 | 168 | 310 | 1.66e-12 | 68.6 |
| Msa0178350 | AT4G17940.1 | 44.444 | 90 | 50 | 0 | 275 | 364 | 148 | 237 | 1.01e-21 | 94.7 |
| Msa0178350 | AT4G17940.1 | 39.423 | 104 | 62 | 1 | 128 | 230 | 145 | 248 | 5.38e-20 | 90.1 |
| Msa0178350 | AT4G32340.1 | 44.000 | 100 | 54 | 2 | 132 | 229 | 109 | 208 | 5.31e-21 | 92.0 |
| Msa0178350 | AT1G80130.1 | 46.809 | 94 | 49 | 1 | 136 | 228 | 168 | 261 | 1.52e-20 | 92.0 |
| Msa0178350 | AT1G80130.1 | 39.785 | 93 | 55 | 1 | 272 | 364 | 161 | 252 | 5.64e-14 | 72.8 |
| Msa0178350 | AT5G20190.1 | 42.424 | 99 | 56 | 1 | 132 | 229 | 155 | 253 | 1.64e-18 | 85.9 |
| Msa0178350 | AT5G20190.1 | 40.000 | 85 | 51 | 0 | 280 | 364 | 159 | 243 | 6.60e-16 | 78.2 |
| Msa0178350 | AT2G29670.1 | 33.088 | 136 | 88 | 2 | 227 | 362 | 373 | 505 | 1.62e-12 | 69.7 |
| Msa0178350 | AT2G29670.2 | 33.088 | 136 | 88 | 2 | 227 | 362 | 373 | 505 | 1.62e-12 | 69.7 |
Find 74 sgRNAs with CRISPR-Local
Find 177 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCTCACTTTCTTGCAAATT+TGG | 0.079418 | 1_4:-65658839 | None:intergenic |
| CCGTACAAAGTAGTAATTTA+AGG | 0.147461 | 1_4:-65661716 | None:intergenic |
| GTACGCTCAGTTTCTGTTTC+AGG | 0.166031 | 1_4:+65660540 | Msa0178350:CDS |
| CAGCATATACATGCTTTCTT+TGG | 0.171876 | 1_4:+65661480 | Msa0178350:CDS |
| TATAATGAGTGGTAAATTTA+TGG | 0.180668 | 1_4:-65661759 | None:intergenic |
| CACCTTTGAAAGAAGTAAAA+TGG | 0.221061 | 1_4:+65658628 | Msa0178350:CDS |
| CTGCAAAATGTCGTTGTTAT+AGG | 0.262319 | 1_4:+65661559 | Msa0178350:CDS |
| AATACCTCAAATGAAGAAAA+TGG | 0.310808 | 1_4:+65660412 | Msa0178350:CDS |
| GTCAACTGAGATTCAGAATC+TGG | 0.322147 | 1_4:+65658688 | Msa0178350:CDS |
| TTCAGAAACAAAGGATTGTT+AGG | 0.327806 | 1_4:-65660514 | None:intergenic |
| GTCGTTGTTATAGGAGAATA+AGG | 0.369277 | 1_4:+65661568 | Msa0178350:CDS |
| ATCAAAATTTCACCATCATT+AGG | 0.370677 | 1_4:-65659975 | None:intergenic |
| AGCATATACATGCTTTCTTT+GGG | 0.379573 | 1_4:+65661481 | Msa0178350:CDS |
| AAATAGAATGAATAAAAGTA+TGG | 0.400276 | 1_4:-65661650 | None:intergenic |
| CGTACAAAGTAGTAATTTAA+GGG | 0.413805 | 1_4:-65661715 | None:intergenic |
| GCAACAGGACTTGGAGTTGA+TGG | 0.417790 | 1_4:+65658761 | Msa0178350:CDS |
| TGAAATTGTTTCACCATCGC+TGG | 0.420683 | 1_4:-65660892 | None:intergenic |
| TTTATTTGAACAAGCAGTTA+AGG | 0.423525 | 1_4:+65660968 | Msa0178350:CDS |
| TTGTTGTATATTTCAAATGA+TGG | 0.427857 | 1_4:-65658536 | None:intergenic |
| ATGTATCTTGCAACAGGACT+TGG | 0.428297 | 1_4:+65658752 | Msa0178350:CDS |
| TTAAGGCTACCCCTGGAGAT+AGG | 0.448416 | 1_4:+65660985 | Msa0178350:CDS |
| CCTTAAATTACTACTTTGTA+CGG | 0.459387 | 1_4:+65661716 | Msa0178350:three_prime_UTR |
| TGCTCTATGCGAAGCTGGTG+TGG | 0.460987 | 1_4:+65659997 | Msa0178350:CDS |
| CCTCCTATGTATCTTGCAAC+AGG | 0.473970 | 1_4:+65658746 | Msa0178350:CDS |
| AAGAAGATAATCAAAATGAT+TGG | 0.474293 | 1_4:+65658666 | Msa0178350:CDS |
| TCTTCATTTGAGGTATTGAC+AGG | 0.479140 | 1_4:-65660406 | None:intergenic |
| TGAAGAGTATTGCAAGAGAA+TGG | 0.488194 | 1_4:+65658865 | Msa0178350:CDS |
| CTAAAGCTTCGCCTCAAGAC+AGG | 0.490113 | 1_4:+65660069 | Msa0178350:CDS |
| AGATACATAGGAGGTGTAGA+TGG | 0.495455 | 1_4:-65658737 | None:intergenic |
| GTGGCAACTTCATCATGATC+AGG | 0.495824 | 1_4:+65660932 | Msa0178350:CDS |
| TGCAGATTATTTGAAGAGGA+TGG | 0.501840 | 1_4:+65660480 | Msa0178350:CDS |
| TTCAGAATCAAAGGATGAGA+AGG | 0.514170 | 1_4:-65658899 | None:intergenic |
| TTACTACTCAAGAGCAATCT+CGG | 0.518424 | 1_4:+65660863 | Msa0178350:CDS |
| CTGCTCTATCTCTGTCGTGA+TGG | 0.521264 | 1_4:-65660025 | None:intergenic |
| TGCAGCAGATCTATCGAACC+TGG | 0.523873 | 1_4:-65661541 | None:intergenic |
| TTTGATGCTCTATGCGAAGC+TGG | 0.524828 | 1_4:+65659992 | Msa0178350:CDS |
| GGTTGAGAGAAAGCATCATA+AGG | 0.532532 | 1_4:-65661227 | None:intergenic |
| TCATCTACTAATAGGGTAAG+GGG | 0.539500 | 1_4:+65659904 | Msa0178350:intron |
| AAGGACTTGATCACCTATGT+TGG | 0.540077 | 1_4:-65661285 | None:intergenic |
| ATCAGAGGACGTGGAAGTGA+AGG | 0.540570 | 1_4:-65661260 | None:intergenic |
| ATCATCTACTAATAGGGTAA+GGG | 0.541052 | 1_4:+65659903 | Msa0178350:intron |
| AAATGATGGAGATGAACGTA+AGG | 0.550574 | 1_4:-65658522 | None:intergenic |
| GAAATTGTTTCACCATCGCT+GGG | 0.552771 | 1_4:-65660891 | None:intergenic |
| CAAGCAGTTAAGGCTACCCC+TGG | 0.561179 | 1_4:+65660978 | Msa0178350:CDS |
| AGTCCTGTTGCAAGATACAT+AGG | 0.565402 | 1_4:-65658749 | None:intergenic |
| ACTCTAGCTGATCCTAATGA+TGG | 0.567435 | 1_4:+65659963 | Msa0178350:CDS |
| ATGATGCAGATTATTTGAAG+AGG | 0.572197 | 1_4:+65660476 | Msa0178350:CDS |
| GCTCTATGCGAAGCTGGTGT+GGG | 0.572807 | 1_4:+65659998 | Msa0178350:CDS |
| GTTATGAGTTTAGAATCCAT+TGG | 0.573537 | 1_4:+65658590 | Msa0178350:CDS |
| GAAAGTGCACTTATAATGAG+TGG | 0.582207 | 1_4:-65661770 | None:intergenic |
| TCAACTGAGATTCAGAATCT+GGG | 0.587949 | 1_4:+65658689 | Msa0178350:CDS |
| CGTCCTCTGATTTCCAACAT+AGG | 0.590114 | 1_4:+65661272 | Msa0178350:CDS |
| CTGAATTCAAAAGTAGAACC+AGG | 0.591632 | 1_4:+65661523 | Msa0178350:CDS |
| GAAGTCACTACTACTTCCAA+TGG | 0.594253 | 1_4:-65658606 | None:intergenic |
| CAGAATATGCTAAACTGCAG+TGG | 0.603429 | 1_4:+65660913 | Msa0178350:CDS |
| TAGAGATCTAGAAGCAGCAG+AGG | 0.604023 | 1_4:+65660839 | Msa0178350:CDS |
| GGGACTGTGAAGCTCAGCCA+TGG | 0.605765 | 1_4:-65658465 | None:intergenic |
| ATGTTGGAAATCAGAGGACG+TGG | 0.606654 | 1_4:-65661269 | None:intergenic |
| TCTTTGGGAAACAGAAGACA+AGG | 0.608667 | 1_4:+65661496 | Msa0178350:CDS |
| TAATGAAACTCATCTTCCGT+TGG | 0.610252 | 1_4:-65658497 | None:intergenic |
| ATCTCGGCTGATCCCAGCGA+TGG | 0.610721 | 1_4:+65660879 | Msa0178350:CDS |
| GCGTACTTCTTCAGAAACAA+AGG | 0.614171 | 1_4:-65660523 | None:intergenic |
| AATGATGGAGATGAACGTAA+GGG | 0.618400 | 1_4:-65658521 | None:intergenic |
| AAGTGAAAATCATACAACTC+AGG | 0.633526 | 1_4:+65660260 | Msa0178350:CDS |
| ATGATGGAGATGAACGTAAG+GGG | 0.647377 | 1_4:-65658520 | None:intergenic |
| CATCTACTAATAGGGTAAGG+GGG | 0.648861 | 1_4:+65659905 | Msa0178350:intron |
| TCACCTATGTTGGAAATCAG+AGG | 0.649822 | 1_4:-65661275 | None:intergenic |
| GATTCAGAATCTGGGTGTTG+AGG | 0.652392 | 1_4:+65658697 | Msa0178350:CDS |
| CAGTCCCAACAAAACACCAA+CGG | 0.666993 | 1_4:+65658481 | Msa0178350:CDS |
| AAGTGTTGCTACCTGTCTTG+AGG | 0.667059 | 1_4:-65660080 | None:intergenic |
| CCTGTTGCAAGATACATAGG+AGG | 0.682981 | 1_4:-65658746 | None:intergenic |
| ACAGGACTTGGAGTTGATGG+TGG | 0.718210 | 1_4:+65658764 | Msa0178350:CDS |
| TATCTTGTGGCTAAACACCA+TGG | 0.719281 | 1_4:+65658448 | Msa0178350:exon |
| TCACGACAGAGATAGAGCAG+CGG | 0.771906 | 1_4:+65660028 | Msa0178350:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATTTTTTTATTATTAAGCA+TGG | + | chr1_4:65658978-65658997 | Msa0178350:intron | 10.0% |
| !! | TTAATTATTAAACAAACAAT+CGG | - | chr1_4:65660340-65660359 | None:intergenic | 10.0% |
| !! | TTAATACATCAATTAATTAG+AGG | - | chr1_4:65659505-65659524 | None:intergenic | 15.0% |
| !! | ACTAAATTTACATATTAATG+AGG | + | chr1_4:65659536-65659555 | Msa0178350:intron | 15.0% |
| !! | AAATAGAATGAATAAAAGTA+TGG | - | chr1_4:65661653-65661672 | None:intergenic | 15.0% |
| !! | TTGTTGTATATTTCAAATGA+TGG | - | chr1_4:65658539-65658558 | None:intergenic | 20.0% |
| !! | AAGAAGATAATCAAAATGAT+TGG | + | chr1_4:65658666-65658685 | Msa0178350:CDS | 20.0% |
| !!! | AGTGAGTTGTTTATTTTTTT+AGG | + | chr1_4:65658943-65658962 | Msa0178350:intron | 20.0% |
| !!! | GTGAGTTGTTTATTTTTTTA+GGG | + | chr1_4:65658944-65658963 | Msa0178350:intron | 20.0% |
| !!! | TGATTTTCTCAAATTACTAA+CGG | + | chr1_4:65659075-65659094 | Msa0178350:intron | 20.0% |
| !! | AAGTTTCAATATTAGTAGAA+AGG | + | chr1_4:65659324-65659343 | Msa0178350:intron | 20.0% |
| !!! | TATCGTTCTAAAAAATCAAT+AGG | - | chr1_4:65659744-65659763 | None:intergenic | 20.0% |
| !!! | AATTTTCATCATCTACTAAT+AGG | + | chr1_4:65659896-65659915 | Msa0178350:intron | 20.0% |
| !!! | ATTTTCATCATCTACTAATA+GGG | + | chr1_4:65659897-65659916 | Msa0178350:intron | 20.0% |
| !!! | TTACTGTTATCTTTTATTCA+TGG | - | chr1_4:65660163-65660182 | None:intergenic | 20.0% |
| !!! | TTTGACTGTACATTATTTTA+AGG | - | chr1_4:65660819-65660838 | None:intergenic | 20.0% |
| !! | AAACAAAGAAGAAAAATCAT+AGG | + | chr1_4:65661075-65661094 | Msa0178350:intron | 20.0% |
| !! | TATAATGAGTGGTAAATTTA+TGG | - | chr1_4:65661762-65661781 | None:intergenic | 20.0% |
| !! | ATCCATTTTACTTCTTTCAA+AGG | - | chr1_4:65658633-65658652 | None:intergenic | 25.0% |
| !!! | GCATATTTTTTCAGAATCAA+AGG | - | chr1_4:65658911-65658930 | None:intergenic | 25.0% |
| ! | TCTTCTTGAATTGAAAAACA+TGG | - | chr1_4:65659184-65659203 | None:intergenic | 25.0% |
| ! | CAATGTTTGATCACATAATT+CGG | - | chr1_4:65659380-65659399 | None:intergenic | 25.0% |
| !! | CTTTTTGTATCTCTTACTTT+TGG | + | chr1_4:65659406-65659425 | Msa0178350:intron | 25.0% |
| !! | CAAAATTTAGAACAACAATC+TGG | - | chr1_4:65659433-65659452 | None:intergenic | 25.0% |
| ! | TTTGATTCTGAATGAATAGA+TGG | + | chr1_4:65659449-65659468 | Msa0178350:intron | 25.0% |
| ! | ATTGATGTATTAAGTCTCAT+AGG | + | chr1_4:65659512-65659531 | Msa0178350:intron | 25.0% |
| ! | TTGATGTATTAAGTCTCATA+GGG | + | chr1_4:65659513-65659532 | Msa0178350:intron | 25.0% |
| !! | ATTTGAAATCTATCTATGTG+TGG | - | chr1_4:65659562-65659581 | None:intergenic | 25.0% |
| ! | CATAGATAGATTTCAAATAG+CGG | + | chr1_4:65659564-65659583 | Msa0178350:intron | 25.0% |
| ! | ATCAAAATTTCACCATCATT+AGG | - | chr1_4:65659978-65659997 | None:intergenic | 25.0% |
| ! | AATACCTCAAATGAAGAAAA+TGG | + | chr1_4:65660412-65660431 | Msa0178350:CDS | 25.0% |
| ! | ATGATCATCATTATAGTATG+AGG | + | chr1_4:65660721-65660740 | Msa0178350:intron | 25.0% |
| ! | TTTATTTGAACAAGCAGTTA+AGG | + | chr1_4:65660968-65660987 | Msa0178350:CDS | 25.0% |
| !! | TGACACGTTTTTGATATAAA+AGG | + | chr1_4:65661019-65661038 | Msa0178350:intron | 25.0% |
| !!! | TTTGTTTTAGCAGCATTAAT+AGG | - | chr1_4:65661062-65661081 | None:intergenic | 25.0% |
| !!! | AGTTTGCTATGATTTTAGTT+TGG | + | chr1_4:65661133-65661152 | Msa0178350:intron | 25.0% |
| ! | TACTTGATTTACTCTTAATG+GGG | - | chr1_4:65661311-65661330 | None:intergenic | 25.0% |
| ! | GTACTTGATTTACTCTTAAT+GGG | - | chr1_4:65661312-65661331 | None:intergenic | 25.0% |
| ! | AGTACTTGATTTACTCTTAA+TGG | - | chr1_4:65661313-65661332 | None:intergenic | 25.0% |
| ! | CGTACAAAGTAGTAATTTAA+GGG | - | chr1_4:65661718-65661737 | None:intergenic | 25.0% |
| ! | CCTTAAATTACTACTTTGTA+CGG | + | chr1_4:65661716-65661735 | Msa0178350:three_prime_UTR | 25.0% |
| ! | GTTATGAGTTTAGAATCCAT+TGG | + | chr1_4:65658590-65658609 | Msa0178350:CDS | 30.0% |
| ! | CACCTTTGAAAGAAGTAAAA+TGG | + | chr1_4:65658628-65658647 | Msa0178350:CDS | 30.0% |
| TTCTCACTTTCTTGCAAATT+TGG | - | chr1_4:65658842-65658861 | None:intergenic | 30.0% | |
| AATCTAATCGACTAAAACCA+AGG | - | chr1_4:65659149-65659168 | None:intergenic | 30.0% | |
| ! | TCTGAATGAATAGATGGTTT+TGG | + | chr1_4:65659455-65659474 | Msa0178350:intron | 30.0% |
| ! | TTTTGGATGATATGAGTAGT+AGG | + | chr1_4:65659472-65659491 | Msa0178350:intron | 30.0% |
| CTATAATGTAGTCATGACTA+AGG | - | chr1_4:65659613-65659632 | None:intergenic | 30.0% | |
| AATGTCAGTTGCAACAATAT+TGG | - | chr1_4:65659666-65659685 | None:intergenic | 30.0% | |
| !! | TGTTATTAGTTCTACTAAGC+AGG | - | chr1_4:65659714-65659733 | None:intergenic | 30.0% |
| AGATAAAATTTCACAACCAC+TGG | + | chr1_4:65659783-65659802 | Msa0178350:intron | 30.0% | |
| GATAAAATTTCACAACCACT+GGG | + | chr1_4:65659784-65659803 | Msa0178350:intron | 30.0% | |
| ATCATCTACTAATAGGGTAA+GGG | + | chr1_4:65659903-65659922 | Msa0178350:intron | 30.0% | |
| ! | CCAGTTTCTTTTGTATAGAA+TGG | - | chr1_4:65660106-65660125 | None:intergenic | 30.0% |
| CCATTCTATACAAAAGAAAC+TGG | + | chr1_4:65660103-65660122 | Msa0178350:intron | 30.0% | |
| CTATACAAAAGAAACTGGAA+TGG | + | chr1_4:65660108-65660127 | Msa0178350:intron | 30.0% | |
| AAGTGAAAATCATACAACTC+AGG | + | chr1_4:65660260-65660279 | Msa0178350:CDS | 30.0% | |
| !! | CTTTTCTTCCAGCTATTTTA+AGG | + | chr1_4:65660294-65660313 | Msa0178350:intron | 30.0% |
| ATGATGCAGATTATTTGAAG+AGG | + | chr1_4:65660476-65660495 | Msa0178350:CDS | 30.0% | |
| TTCAGAAACAAAGGATTGTT+AGG | - | chr1_4:65660517-65660536 | None:intergenic | 30.0% | |
| ! | TCCTTTAGGAGTATAATGTT+AGG | + | chr1_4:65660604-65660623 | Msa0178350:intron | 30.0% |
| TCCTAACATTATACTCCTAA+AGG | - | chr1_4:65660608-65660627 | None:intergenic | 30.0% | |
| ! | CTGTACATTTTATGCTCAAA+AGG | - | chr1_4:65660658-65660677 | None:intergenic | 30.0% |
| GTTATAGACATGCTATTACT+TGG | + | chr1_4:65660760-65660779 | Msa0178350:intron | 30.0% | |
| !!! | GACTGTACATTATTTTAAGG+TGG | - | chr1_4:65660816-65660835 | None:intergenic | 30.0% |
| ! | AAGAATTTTACCTATCTCCA+GGG | - | chr1_4:65660998-65661017 | None:intergenic | 30.0% |
| AGCATATACATGCTTTCTTT+GGG | + | chr1_4:65661481-65661500 | Msa0178350:CDS | 30.0% | |
| AAACCAAAAACAATCAACAG+AGG | + | chr1_4:65661592-65661611 | Msa0178350:CDS | 30.0% | |
| CCGTACAAAGTAGTAATTTA+AGG | - | chr1_4:65661719-65661738 | None:intergenic | 30.0% | |
| TAATGAAACTCATCTTCCGT+TGG | - | chr1_4:65658500-65658519 | None:intergenic | 35.0% | |
| ! | AATGATGGAGATGAACGTAA+GGG | - | chr1_4:65658524-65658543 | None:intergenic | 35.0% |
| ! | AAATGATGGAGATGAACGTA+AGG | - | chr1_4:65658525-65658544 | None:intergenic | 35.0% |
| !! | GTTCTTTTCAGAACTTGTTC+AGG | - | chr1_4:65658569-65658588 | None:intergenic | 35.0% |
| TCAACTGAGATTCAGAATCT+GGG | + | chr1_4:65658689-65658708 | Msa0178350:CDS | 35.0% | |
| !! | TGAAGAGTATTGCAAGAGAA+TGG | + | chr1_4:65658865-65658884 | Msa0178350:CDS | 35.0% |
| TTCAGAATCAAAGGATGAGA+AGG | - | chr1_4:65658902-65658921 | None:intergenic | 35.0% | |
| TCTCAAATTACTAACGGTGT+CGG | + | chr1_4:65659081-65659100 | Msa0178350:intron | 35.0% | |
| ATGACACCTTACTGATAAGT+GGG | + | chr1_4:65659230-65659249 | Msa0178350:intron | 35.0% | |
| TGCAGAGTAATGTTGTTAAC+TGG | + | chr1_4:65659274-65659293 | Msa0178350:intron | 35.0% | |
| TGGTTGCGACATCAAAATTT+CGG | - | chr1_4:65659646-65659665 | None:intergenic | 35.0% | |
| GAAACATCAAGCTCATCAAA+AGG | - | chr1_4:65659848-65659867 | None:intergenic | 35.0% | |
| CATCATCTACTAATAGGGTA+AGG | + | chr1_4:65659902-65659921 | Msa0178350:intron | 35.0% | |
| TCATCTACTAATAGGGTAAG+GGG | + | chr1_4:65659904-65659923 | Msa0178350:intron | 35.0% | |
| !!! | AGCATATGCTAGTTTTCTCT+GGG | + | chr1_4:65660215-65660234 | Msa0178350:CDS | 35.0% |
| !! | AACAAACAATCGGTGTCATT+TGG | - | chr1_4:65660330-65660349 | None:intergenic | 35.0% |
| !! | TCTTCATTTGAGGTATTGAC+AGG | - | chr1_4:65660409-65660428 | None:intergenic | 35.0% |
| ! | TGCACCATTTTCTTCATTTG+AGG | - | chr1_4:65660419-65660438 | None:intergenic | 35.0% |
| TGCAGATTATTTGAAGAGGA+TGG | + | chr1_4:65660480-65660499 | Msa0178350:CDS | 35.0% | |
| ! | TCAAAAGGCTGAAATTTGCT+CGG | - | chr1_4:65660643-65660662 | None:intergenic | 35.0% |
| !! | ATGCTATTACTTGGTGTTTG+AGG | + | chr1_4:65660769-65660788 | Msa0178350:intron | 35.0% |
| TTACTACTCAAGAGCAATCT+CGG | + | chr1_4:65660863-65660882 | Msa0178350:CDS | 35.0% | |
| ! | AGAATTTTACCTATCTCCAG+GGG | - | chr1_4:65660997-65661016 | None:intergenic | 35.0% |
| ! | CAAGAATTTTACCTATCTCC+AGG | - | chr1_4:65660999-65661018 | None:intergenic | 35.0% |
| GGAAGTGAAGGAAAAAATGA+AGG | - | chr1_4:65661251-65661270 | None:intergenic | 35.0% | |
| TGATTTACTCTTAATGGGGA+AGG | - | chr1_4:65661307-65661326 | None:intergenic | 35.0% | |
| CAGCATATACATGCTTTCTT+TGG | + | chr1_4:65661480-65661499 | Msa0178350:CDS | 35.0% | |
| CTGAATTCAAAAGTAGAACC+AGG | + | chr1_4:65661523-65661542 | Msa0178350:CDS | 35.0% | |
| CTGCAAAATGTCGTTGTTAT+AGG | + | chr1_4:65661559-65661578 | Msa0178350:CDS | 35.0% | |
| GTCGTTGTTATAGGAGAATA+AGG | + | chr1_4:65661568-65661587 | Msa0178350:CDS | 35.0% | |
| !! | CTTCCTCTGTTGATTGTTTT+TGG | - | chr1_4:65661598-65661617 | None:intergenic | 35.0% |
| TATCTTGTGGCTAAACACCA+TGG | + | chr1_4:65658448-65658467 | Msa0178350:exon | 40.0% | |
| !! | TCTTCCGTTGGTGTTTTGTT+GGG | - | chr1_4:65658488-65658507 | None:intergenic | 40.0% |
| !! | ATCTTCCGTTGGTGTTTTGT+TGG | - | chr1_4:65658489-65658508 | None:intergenic | 40.0% |
| ! | ATGATGGAGATGAACGTAAG+GGG | - | chr1_4:65658523-65658542 | None:intergenic | 40.0% |
| GAAGTCACTACTACTTCCAA+TGG | - | chr1_4:65658609-65658628 | None:intergenic | 40.0% | |
| GTCAACTGAGATTCAGAATC+TGG | + | chr1_4:65658688-65658707 | Msa0178350:CDS | 40.0% | |
| ! | AGATACATAGGAGGTGTAGA+TGG | - | chr1_4:65658740-65658759 | None:intergenic | 40.0% |
| AGTCCTGTTGCAAGATACAT+AGG | - | chr1_4:65658752-65658771 | None:intergenic | 40.0% | |
| ATGTATCTTGCAACAGGACT+TGG | + | chr1_4:65658752-65658771 | Msa0178350:CDS | 40.0% | |
| GATGACACCTTACTGATAAG+TGG | + | chr1_4:65659229-65659248 | Msa0178350:intron | 40.0% | |
| !! | ATTAGTTCTACTAAGCAGGC+AGG | - | chr1_4:65659710-65659729 | None:intergenic | 40.0% |
| CATCTACTAATAGGGTAAGG+GGG | + | chr1_4:65659905-65659924 | Msa0178350:intron | 40.0% | |
| ACTCTAGCTGATCCTAATGA+TGG | + | chr1_4:65659963-65659982 | Msa0178350:CDS | 40.0% | |
| !!! | CAGCATATGCTAGTTTTCTC+TGG | + | chr1_4:65660214-65660233 | Msa0178350:CDS | 40.0% |
| ! | GACAATGGCCTTAAAATAGC+TGG | - | chr1_4:65660305-65660324 | None:intergenic | 40.0% |
| GCGTACTTCTTCAGAAACAA+AGG | - | chr1_4:65660526-65660545 | None:intergenic | 40.0% | |
| ! | CAAAAGGCTGAAATTTGCTC+GGG | - | chr1_4:65660642-65660661 | None:intergenic | 40.0% |
| GAAATTGTTTCACCATCGCT+GGG | - | chr1_4:65660894-65660913 | None:intergenic | 40.0% | |
| TGAAATTGTTTCACCATCGC+TGG | - | chr1_4:65660895-65660914 | None:intergenic | 40.0% | |
| CAGAATATGCTAAACTGCAG+TGG | + | chr1_4:65660913-65660932 | Msa0178350:CDS | 40.0% | |
| !! | GGTTGAGAGAAAGCATCATA+AGG | - | chr1_4:65661230-65661249 | None:intergenic | 40.0% |
| TCACCTATGTTGGAAATCAG+AGG | - | chr1_4:65661278-65661297 | None:intergenic | 40.0% | |
| AAGGACTTGATCACCTATGT+TGG | - | chr1_4:65661288-65661307 | None:intergenic | 40.0% | |
| ATATGCTGCAAGAACATTGC+TGG | - | chr1_4:65661468-65661487 | None:intergenic | 40.0% | |
| ! | TCTTTGGGAAACAGAAGACA+AGG | + | chr1_4:65661496-65661515 | Msa0178350:CDS | 40.0% |
| CAGTCCCAACAAAACACCAA+CGG | + | chr1_4:65658481-65658500 | Msa0178350:CDS | 45.0% | |
| ! | GATTCAGAATCTGGGTGTTG+AGG | + | chr1_4:65658697-65658716 | Msa0178350:CDS | 45.0% |
| CCTGTTGCAAGATACATAGG+AGG | - | chr1_4:65658749-65658768 | None:intergenic | 45.0% | |
| CCTCCTATGTATCTTGCAAC+AGG | + | chr1_4:65658746-65658765 | Msa0178350:CDS | 45.0% | |
| ATTGGGACACGTCTAATCAG+AGG | - | chr1_4:65659009-65659028 | None:intergenic | 45.0% | |
| TGAGTGTCAGACACGACATT+GGG | - | chr1_4:65659026-65659045 | None:intergenic | 45.0% | |
| TGTCTGTATCCTTGCTTCCT+TGG | + | chr1_4:65659129-65659148 | Msa0178350:intron | 45.0% | |
| CGACTAAAACCAAGGAAGCA+AGG | - | chr1_4:65659141-65659160 | None:intergenic | 45.0% | |
| CACCTTACTGATAAGTGGGT+AGG | + | chr1_4:65659234-65659253 | Msa0178350:intron | 45.0% | |
| GACCTACCCACTTATCAGTA+AGG | - | chr1_4:65659239-65659258 | None:intergenic | 45.0% | |
| TCAAATAGCGGTAACACTCG+CGG | + | chr1_4:65659576-65659595 | Msa0178350:intron | 45.0% | |
| TTTGATGCTCTATGCGAAGC+TGG | + | chr1_4:65659992-65660011 | Msa0178350:CDS | 45.0% | |
| ! | AAGTGTTGCTACCTGTCTTG+AGG | - | chr1_4:65660083-65660102 | None:intergenic | 45.0% |
| CTGCAAGAACATCGCTGAAA+AGG | - | chr1_4:65660197-65660216 | None:intergenic | 45.0% | |
| !! | CGGTGTCATTTGGAAGACAA+TGG | - | chr1_4:65660320-65660339 | None:intergenic | 45.0% |
| GTACGCTCAGTTTCTGTTTC+AGG | + | chr1_4:65660540-65660559 | Msa0178350:CDS | 45.0% | |
| ! | CTCAGTTTCTGTTTCAGGTG+AGG | + | chr1_4:65660545-65660564 | Msa0178350:intron | 45.0% |
| CAGACGCATACACATCCTTT+AGG | + | chr1_4:65660590-65660609 | Msa0178350:intron | 45.0% | |
| ATGAGGCTATGAGCTTCACA+TGG | + | chr1_4:65660738-65660757 | Msa0178350:intron | 45.0% | |
| TAGAGATCTAGAAGCAGCAG+AGG | + | chr1_4:65660839-65660858 | Msa0178350:CDS | 45.0% | |
| GTGGCAACTTCATCATGATC+AGG | + | chr1_4:65660932-65660951 | Msa0178350:CDS | 45.0% | |
| ATGTTGGAAATCAGAGGACG+TGG | - | chr1_4:65661272-65661291 | None:intergenic | 45.0% | |
| CGTCCTCTGATTTCCAACAT+AGG | + | chr1_4:65661272-65661291 | Msa0178350:CDS | 45.0% | |
| !!! | ATACATATATTTTTTTTTTA+CGG | + | chr1_4:65659207-65659226 | Msa0178350:intron | 5.0% |
| GCAACAGGACTTGGAGTTGA+TGG | + | chr1_4:65658761-65658780 | Msa0178350:CDS | 50.0% | |
| !! | ACAGGACTTGGAGTTGATGG+TGG | + | chr1_4:65658764-65658783 | Msa0178350:CDS | 50.0% |
| GTGAGTGTCAGACACGACAT+TGG | - | chr1_4:65659027-65659046 | None:intergenic | 50.0% | |
| CAAGGATACAGACACGACAC+CGG | - | chr1_4:65659123-65659142 | None:intergenic | 50.0% | |
| TGATAAGTGGGTAGGTCGCT+TGG | + | chr1_4:65659242-65659261 | Msa0178350:intron | 50.0% | |
| GATAAGTGGGTAGGTCGCTT+GGG | + | chr1_4:65659243-65659262 | Msa0178350:intron | 50.0% | |
| GGATCTGCAGTCAGAGACTT+AGG | + | chr1_4:65659345-65659364 | Msa0178350:intron | 50.0% | |
| TTCACAACCACTGGGAGTCT+AGG | + | chr1_4:65659792-65659811 | Msa0178350:intron | 50.0% | |
| AAGTTCTCCTAGACTCCCAG+TGG | - | chr1_4:65659802-65659821 | None:intergenic | 50.0% | |
| CTGCTCTATCTCTGTCGTGA+TGG | - | chr1_4:65660028-65660047 | None:intergenic | 50.0% | |
| TCACGACAGAGATAGAGCAG+CGG | + | chr1_4:65660028-65660047 | Msa0178350:CDS | 50.0% | |
| CTAAAGCTTCGCCTCAAGAC+AGG | + | chr1_4:65660069-65660088 | Msa0178350:CDS | 50.0% | |
| TTAAGGCTACCCCTGGAGAT+AGG | + | chr1_4:65660985-65661004 | Msa0178350:CDS | 50.0% | |
| ATCAGAGGACGTGGAAGTGA+AGG | - | chr1_4:65661263-65661282 | None:intergenic | 50.0% | |
| TGCAGCAGATCTATCGAACC+TGG | - | chr1_4:65661544-65661563 | None:intergenic | 50.0% | |
| TCTACTAAGCAGGCAGGAGC+AGG | - | chr1_4:65659704-65659723 | None:intergenic | 55.0% | |
| TGCTCTATGCGAAGCTGGTG+TGG | + | chr1_4:65659997-65660016 | Msa0178350:CDS | 55.0% | |
| GCTCTATGCGAAGCTGGTGT+GGG | + | chr1_4:65659998-65660017 | Msa0178350:CDS | 55.0% | |
| CAAGCAGTTAAGGCTACCCC+TGG | + | chr1_4:65660978-65660997 | Msa0178350:CDS | 55.0% | |
| GGGACTGTGAAGCTCAGCCA+TGG | - | chr1_4:65658468-65658487 | None:intergenic | 60.0% | |
| ACACGACACCGGACACGACA+CGG | - | chr1_4:65659112-65659131 | None:intergenic | 60.0% | |
| AAGTGGGTAGGTCGCTTGGG+AGG | + | chr1_4:65659246-65659265 | Msa0178350:intron | 60.0% | |
| AGTGGGTAGGTCGCTTGGGA+GGG | + | chr1_4:65659247-65659266 | Msa0178350:intron | 60.0% | |
| GGGGGAGCTTCAAGATGCAG+AGG | + | chr1_4:65659923-65659942 | Msa0178350:CDS | 60.0% | |
| ATCTCGGCTGATCCCAGCGA+TGG | + | chr1_4:65660879-65660898 | Msa0178350:CDS | 60.0% | |
| CGGCATGTCCGTGTCGTGTC+CGG | + | chr1_4:65659101-65659120 | Msa0178350:intron | 65.0% | |
| GTGGGTAGGTCGCTTGGGAG+GGG | + | chr1_4:65659248-65659267 | Msa0178350:intron | 65.0% | |
| GGTAGGTCGCTTGGGAGGGG+TGG | + | chr1_4:65659251-65659270 | Msa0178350:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_4 | gene | 65658439 | 65661782 | 65658439 | ID=Msa0178350;Name=Msa0178350 |
| chr1_4 | mRNA | 65658439 | 65661782 | 65658439 | ID=Msa0178350-mRNA-1;Parent=Msa0178350;Name=Msa0178350-mRNA-1;_AED=0.21;_eAED=0.21;_QI=28|0.66|0.85|0.85|1|1|7|153|439 |
| chr1_4 | exon | 65658439 | 65658943 | 65658439 | ID=Msa0178350-mRNA-1:exon:21381;Parent=Msa0178350-mRNA-1 |
| chr1_4 | exon | 65659918 | 65660090 | 65659918 | ID=Msa0178350-mRNA-1:exon:21382;Parent=Msa0178350-mRNA-1 |
| chr1_4 | exon | 65660203 | 65660281 | 65660203 | ID=Msa0178350-mRNA-1:exon:21383;Parent=Msa0178350-mRNA-1 |
| chr1_4 | exon | 65660379 | 65660561 | 65660379 | ID=Msa0178350-mRNA-1:exon:21384;Parent=Msa0178350-mRNA-1 |
| chr1_4 | exon | 65660834 | 65661006 | 65660834 | ID=Msa0178350-mRNA-1:exon:21385;Parent=Msa0178350-mRNA-1 |
| chr1_4 | exon | 65661220 | 65661293 | 65661220 | ID=Msa0178350-mRNA-1:exon:21386;Parent=Msa0178350-mRNA-1 |
| chr1_4 | exon | 65661469 | 65661782 | 65661469 | ID=Msa0178350-mRNA-1:exon:21387;Parent=Msa0178350-mRNA-1 |
| chr1_4 | five_prime_UTR | 65658439 | 65658466 | 65658439 | ID=Msa0178350-mRNA-1:five_prime_utr;Parent=Msa0178350-mRNA-1 |
| chr1_4 | CDS | 65658467 | 65658943 | 65658467 | ID=Msa0178350-mRNA-1:cds;Parent=Msa0178350-mRNA-1 |
| chr1_4 | CDS | 65659918 | 65660090 | 65659918 | ID=Msa0178350-mRNA-1:cds;Parent=Msa0178350-mRNA-1 |
| chr1_4 | CDS | 65660203 | 65660281 | 65660203 | ID=Msa0178350-mRNA-1:cds;Parent=Msa0178350-mRNA-1 |
| chr1_4 | CDS | 65660379 | 65660561 | 65660379 | ID=Msa0178350-mRNA-1:cds;Parent=Msa0178350-mRNA-1 |
| chr1_4 | CDS | 65660834 | 65661006 | 65660834 | ID=Msa0178350-mRNA-1:cds;Parent=Msa0178350-mRNA-1 |
| chr1_4 | CDS | 65661220 | 65661293 | 65661220 | ID=Msa0178350-mRNA-1:cds;Parent=Msa0178350-mRNA-1 |
| chr1_4 | CDS | 65661469 | 65661629 | 65661469 | ID=Msa0178350-mRNA-1:cds;Parent=Msa0178350-mRNA-1 |
| chr1_4 | three_prime_UTR | 65661630 | 65661782 | 65661630 | ID=Msa0178350-mRNA-1:three_prime_utr;Parent=Msa0178350-mRNA-1 |
| Gene Sequence |
| Protein sequence |
