Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene74980.t1 | XP_013470262.1 | 96.6 | 298 | 10 | 0 | 1 | 298 | 1 | 298 | 7.20E-160 | 573.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene74980.t1 | Q9SEZ6 | 70.9 | 292 | 84 | 1 | 7 | 298 | 6 | 296 | 7.9e-123 | 441.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene74980.t1 | A0A072W210 | 96.6 | 298 | 10 | 0 | 1 | 298 | 1 | 298 | 5.2e-160 | 573.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049159 | MS.gene74980 | 0.817107 | 3.91E-52 | -1.69E-46 |
| MS.gene049341 | MS.gene74980 | 0.823259 | 1.52E-53 | -1.69E-46 |
| MS.gene049378 | MS.gene74980 | 0.800948 | 1.13E-48 | -1.69E-46 |
| MS.gene049382 | MS.gene74980 | 0.827833 | 1.26E-54 | -1.69E-46 |
| MS.gene049501 | MS.gene74980 | 0.810183 | 1.31E-50 | -1.69E-46 |
| MS.gene049756 | MS.gene74980 | 0.831858 | 1.32E-55 | -1.69E-46 |
| MS.gene04984 | MS.gene74980 | 0.804791 | 1.82E-49 | -1.69E-46 |
| MS.gene049850 | MS.gene74980 | 0.800424 | 1.45E-48 | -1.69E-46 |
| MS.gene049979 | MS.gene74980 | 0.830311 | 3.15E-55 | -1.69E-46 |
| MS.gene050020 | MS.gene74980 | 0.832126 | 1.13E-55 | -1.69E-46 |
| MS.gene050226 | MS.gene74980 | 0.835267 | 1.85E-56 | -1.69E-46 |
| MS.gene050227 | MS.gene74980 | 0.832787 | 7.74E-56 | -1.69E-46 |
| MS.gene050228 | MS.gene74980 | 0.826541 | 2.56E-54 | -1.69E-46 |
| MS.gene050277 | MS.gene74980 | 0.804643 | 1.96E-49 | -1.69E-46 |
| MS.gene050303 | MS.gene74980 | 0.801901 | 7.24E-49 | -1.69E-46 |
| MS.gene050438 | MS.gene74980 | 0.840302 | 9.44E-58 | -1.69E-46 |
| MS.gene050442 | MS.gene74980 | 0.853385 | 2.47E-61 | -1.69E-46 |
| MS.gene050586 | MS.gene74980 | 0.850164 | 2.03E-60 | -1.69E-46 |
| MS.gene050623 | MS.gene74980 | -0.818415 | 1.98E-52 | -1.69E-46 |
| MS.gene050719 | MS.gene74980 | 0.838148 | 3.42E-57 | -1.69E-46 |
| MS.gene050721 | MS.gene74980 | 0.836495 | 9.05E-57 | -1.69E-46 |
| MS.gene050724 | MS.gene74980 | 0.839757 | 1.31E-57 | -1.69E-46 |
| MS.gene050762 | MS.gene74980 | 0.825641 | 4.20E-54 | -1.69E-46 |
| MS.gene050763 | MS.gene74980 | 0.825628 | 4.23E-54 | -1.69E-46 |
| MS.gene050807 | MS.gene74980 | 0.85226 | 5.19E-61 | -1.69E-46 |
| MS.gene050808 | MS.gene74980 | 0.80655 | 7.79E-50 | -1.69E-46 |
| MS.gene050815 | MS.gene74980 | 0.857755 | 1.32E-62 | -1.69E-46 |
| MS.gene050824 | MS.gene74980 | 0.802208 | 6.26E-49 | -1.69E-46 |
| MS.gene050959 | MS.gene74980 | 0.834376 | 3.11E-56 | -1.69E-46 |
| MS.gene051243 | MS.gene74980 | 0.804341 | 2.26E-49 | -1.69E-46 |
| MS.gene051247 | MS.gene74980 | 0.801405 | 9.15E-49 | -1.69E-46 |
| MS.gene051265 | MS.gene74980 | 0.805457 | 1.32E-49 | -1.69E-46 |
| MS.gene051328 | MS.gene74980 | 0.807473 | 4.97E-50 | -1.69E-46 |
| MS.gene05157 | MS.gene74980 | 0.815888 | 7.34E-52 | -1.69E-46 |
| MS.gene051626 | MS.gene74980 | 0.818713 | 1.70E-52 | -1.69E-46 |
| MS.gene051757 | MS.gene74980 | 0.809721 | 1.64E-50 | -1.69E-46 |
| MS.gene051789 | MS.gene74980 | 0.840359 | 9.12E-58 | -1.69E-46 |
| MS.gene051860 | MS.gene74980 | 0.802405 | 5.70E-49 | -1.69E-46 |
| MS.gene052012 | MS.gene74980 | 0.813534 | 2.44E-51 | -1.69E-46 |
| MS.gene052020 | MS.gene74980 | 0.821202 | 4.58E-53 | -1.69E-46 |
| MS.gene052256 | MS.gene74980 | 0.800664 | 1.30E-48 | -1.69E-46 |
| MS.gene052302 | MS.gene74980 | 0.816776 | 4.65E-52 | -1.69E-46 |
| MS.gene052323 | MS.gene74980 | 0.834337 | 3.18E-56 | -1.69E-46 |
| MS.gene052376 | MS.gene74980 | 0.826913 | 2.09E-54 | -1.69E-46 |
| MS.gene052611 | MS.gene74980 | 0.814106 | 1.82E-51 | -1.69E-46 |
| MS.gene052613 | MS.gene74980 | 0.80585 | 1.09E-49 | -1.69E-46 |
| MS.gene052665 | MS.gene74980 | 0.864831 | 9.16E-65 | -1.69E-46 |
| MS.gene052856 | MS.gene74980 | 0.826131 | 3.21E-54 | -1.69E-46 |
| MS.gene052858 | MS.gene74980 | 0.813845 | 2.08E-51 | -1.69E-46 |
| MS.gene052860 | MS.gene74980 | 0.830302 | 3.17E-55 | -1.69E-46 |
| MS.gene052863 | MS.gene74980 | 0.813143 | 2.97E-51 | -1.69E-46 |
| MS.gene052896 | MS.gene74980 | 0.840449 | 8.64E-58 | -1.69E-46 |
| MS.gene053008 | MS.gene74980 | 0.806935 | 6.46E-50 | -1.69E-46 |
| MS.gene053074 | MS.gene74980 | 0.840862 | 6.73E-58 | -1.69E-46 |
| MS.gene053174 | MS.gene74980 | 0.803957 | 2.72E-49 | -1.69E-46 |
| MS.gene053437 | MS.gene74980 | 0.817125 | 3.88E-52 | -1.69E-46 |
| MS.gene053630 | MS.gene74980 | 0.829957 | 3.85E-55 | -1.69E-46 |
| MS.gene053836 | MS.gene74980 | 0.809917 | 1.49E-50 | -1.69E-46 |
| MS.gene054184 | MS.gene74980 | 0.82571 | 4.04E-54 | -1.69E-46 |
| MS.gene054185 | MS.gene74980 | 0.835797 | 1.36E-56 | -1.69E-46 |
| MS.gene054379 | MS.gene74980 | 0.822615 | 2.15E-53 | -1.69E-46 |
| MS.gene054472 | MS.gene74980 | 0.837181 | 6.05E-57 | -1.69E-46 |
| MS.gene054596 | MS.gene74980 | 0.82073 | 5.88E-53 | -1.69E-46 |
| MS.gene05462 | MS.gene74980 | 0.804758 | 1.85E-49 | -1.69E-46 |
| MS.gene054942 | MS.gene74980 | 0.8072 | 5.68E-50 | -1.69E-46 |
| MS.gene055363 | MS.gene74980 | 0.813293 | 2.75E-51 | -1.69E-46 |
| MS.gene055465 | MS.gene74980 | 0.80723 | 5.60E-50 | -1.69E-46 |
| MS.gene055466 | MS.gene74980 | 0.82762 | 1.41E-54 | -1.69E-46 |
| MS.gene055468 | MS.gene74980 | 0.817634 | 2.98E-52 | -1.69E-46 |
| MS.gene055512 | MS.gene74980 | 0.816064 | 6.71E-52 | -1.69E-46 |
| MS.gene055816 | MS.gene74980 | -0.802164 | 6.39E-49 | -1.69E-46 |
| MS.gene05604 | MS.gene74980 | 0.811449 | 6.96E-51 | -1.69E-46 |
| MS.gene056069 | MS.gene74980 | -0.849259 | 3.63E-60 | -1.69E-46 |
| MS.gene056432 | MS.gene74980 | 0.824913 | 6.24E-54 | -1.69E-46 |
| MS.gene056584 | MS.gene74980 | 0.809437 | 1.89E-50 | -1.69E-46 |
| MS.gene056589 | MS.gene74980 | 0.803462 | 3.45E-49 | -1.69E-46 |
| MS.gene056643 | MS.gene74980 | 0.807662 | 4.53E-50 | -1.69E-46 |
| MS.gene056760 | MS.gene74980 | 0.850486 | 1.65E-60 | -1.69E-46 |
| MS.gene056875 | MS.gene74980 | 0.813759 | 2.18E-51 | -1.69E-46 |
| MS.gene057060 | MS.gene74980 | 0.802572 | 5.26E-49 | -1.69E-46 |
| MS.gene057140 | MS.gene74980 | 0.821321 | 4.30E-53 | -1.69E-46 |
| MS.gene057260 | MS.gene74980 | 0.836157 | 1.10E-56 | -1.69E-46 |
| MS.gene057869 | MS.gene74980 | 0.812722 | 3.67E-51 | -1.69E-46 |
| MS.gene057915 | MS.gene74980 | 0.818429 | 1.97E-52 | -1.69E-46 |
| MS.gene058084 | MS.gene74980 | 0.832502 | 9.11E-56 | -1.69E-46 |
| MS.gene05809 | MS.gene74980 | 0.800752 | 1.24E-48 | -1.69E-46 |
| MS.gene058146 | MS.gene74980 | 0.803714 | 3.06E-49 | -1.69E-46 |
| MS.gene058168 | MS.gene74980 | 0.853318 | 2.59E-61 | -1.69E-46 |
| MS.gene058182 | MS.gene74980 | 0.809511 | 1.83E-50 | -1.69E-46 |
| MS.gene058636 | MS.gene74980 | 0.839764 | 1.30E-57 | -1.69E-46 |
| MS.gene058906 | MS.gene74980 | 0.853509 | 2.28E-61 | -1.69E-46 |
| MS.gene058982 | MS.gene74980 | 0.834751 | 2.50E-56 | -1.69E-46 |
| MS.gene059006 | MS.gene74980 | 0.80839 | 3.17E-50 | -1.69E-46 |
| MS.gene059124 | MS.gene74980 | 0.815401 | 9.42E-52 | -1.69E-46 |
| MS.gene059713 | MS.gene74980 | 0.813759 | 2.18E-51 | -1.69E-46 |
| MS.gene059725 | MS.gene74980 | 0.82271 | 2.05E-53 | -1.69E-46 |
| MS.gene059937 | MS.gene74980 | 0.827588 | 1.44E-54 | -1.69E-46 |
| MS.gene06001 | MS.gene74980 | 0.814692 | 1.35E-51 | -1.69E-46 |
| MS.gene060137 | MS.gene74980 | -0.802104 | 6.57E-49 | -1.69E-46 |
| MS.gene060322 | MS.gene74980 | 0.808741 | 2.67E-50 | -1.69E-46 |
| MS.gene060470 | MS.gene74980 | 0.80325 | 3.81E-49 | -1.69E-46 |
| MS.gene060480 | MS.gene74980 | 0.807057 | 6.09E-50 | -1.69E-46 |
| MS.gene060572 | MS.gene74980 | 0.803966 | 2.71E-49 | -1.69E-46 |
| MS.gene060587 | MS.gene74980 | 0.804712 | 1.89E-49 | -1.69E-46 |
| MS.gene060619 | MS.gene74980 | 0.813208 | 2.87E-51 | -1.69E-46 |
| MS.gene060637 | MS.gene74980 | 0.820071 | 8.32E-53 | -1.69E-46 |
| MS.gene060683 | MS.gene74980 | 0.804911 | 1.72E-49 | -1.69E-46 |
| MS.gene060685 | MS.gene74980 | 0.806475 | 8.08E-50 | -1.69E-46 |
| MS.gene060802 | MS.gene74980 | 0.8073 | 5.41E-50 | -1.69E-46 |
| MS.gene060803 | MS.gene74980 | 0.850112 | 2.10E-60 | -1.69E-46 |
| MS.gene060998 | MS.gene74980 | 0.806746 | 7.08E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene53708 | MS.gene74980 | PPI |
| MS.gene071261 | MS.gene74980 | PPI |
| MS.gene74980 | MS.gene43369 | PPI |
| MS.gene066551 | MS.gene74980 | PPI |
| MS.gene045765 | MS.gene74980 | PPI |
| MS.gene066552 | MS.gene74980 | PPI |
| MS.gene000365 | MS.gene74980 | PPI |
| MS.gene78156 | MS.gene74980 | PPI |
| MS.gene41343 | MS.gene74980 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene74980.t1 | MTR_1g111980 | 97.315 | 298 | 8 | 0 | 1 | 298 | 1 | 298 | 0.0 | 602 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene74980.t1 | AT2G25100 | 71.141 | 298 | 84 | 2 | 1 | 298 | 1 | 296 | 2.32e-165 | 461 |
| MS.gene74980.t1 | AT2G25100 | 66.107 | 298 | 80 | 3 | 1 | 298 | 1 | 277 | 1.90e-148 | 417 |
Find 72 sgRNAs with CRISPR-Local
Find 250 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCAATTGAAATTAAACAATT+TGG | 0.119349 | 1.3:+75955959 | MS.gene74980:CDS |
| CTGCCATGGGCCTCGTTGAT+AGG | 0.233916 | 1.3:+75953706 | MS.gene74980:CDS |
| TTGAAAGCCAATGATTCTAT+TGG | 0.257884 | 1.3:+75953501 | MS.gene74980:CDS |
| CGTTGATAGGGTGCTCAAAA+TGG | 0.268094 | 1.3:+75953719 | MS.gene74980:CDS |
| GATCACAAACATTCTATCTT+TGG | 0.271558 | 1.3:+75954397 | MS.gene74980:CDS |
| GCAACCACAAATTTGATAGA+TGG | 0.310246 | 1.3:-75954027 | None:intergenic |
| TATTTCTTCGCTTCTCCTCT+TGG | 0.315790 | 1.3:-75955994 | None:intergenic |
| CAATTGAAATTAAACAATTT+GGG | 0.333217 | 1.3:+75955960 | MS.gene74980:CDS |
| CAAGTGGTAAAGGGCGTTCT+AGG | 0.341183 | 1.3:+75956021 | MS.gene74980:CDS |
| AACATTAGTCAGGTTTAGTT+GGG | 0.344847 | 1.3:+75954426 | MS.gene74980:CDS |
| GGCATCGGAGGCTTGCATAA+TGG | 0.349327 | 1.3:+75952445 | MS.gene74980:CDS |
| GTCCTTGGTCCTATGGTCTA+TGG | 0.350982 | 1.3:+75952494 | MS.gene74980:CDS |
| CAAATTTGTGGTTGCAAAGA+AGG | 0.351422 | 1.3:+75954035 | MS.gene74980:CDS |
| TCTAGCCAAGACTTGGTTGC+AGG | 0.363522 | 1.3:-75954373 | None:intergenic |
| CAAGCCTCCGATGCCCATTC+CGG | 0.377392 | 1.3:-75952437 | None:intergenic |
| ATCTGAAGCTGGTATGGTTC+CGG | 0.384182 | 1.3:+75952418 | MS.gene74980:CDS |
| GCATCGGAGGCTTGCATAAT+GGG | 0.384725 | 1.3:+75952446 | MS.gene74980:CDS |
| CAACATTAGTCAGGTTTAGT+TGG | 0.397868 | 1.3:+75954425 | MS.gene74980:CDS |
| ATTGATACAGTTGGAGATCC+AGG | 0.399985 | 1.3:+75953973 | MS.gene74980:CDS |
| AGCTGGTATGGTTCCGGAAT+GGG | 0.405216 | 1.3:+75952424 | MS.gene74980:CDS |
| GGTGGCAGCAATAATAATAA+TGG | 0.411127 | 1.3:+75955930 | MS.gene74980:CDS |
| GATAACATTCACAGGAACTT+TGG | 0.418465 | 1.3:+75954232 | MS.gene74980:CDS |
| CAACTAAACCTGACTAATGT+TGG | 0.422536 | 1.3:-75954424 | None:intergenic |
| AGGTCCTGTCCTTGGTCCTA+TGG | 0.426005 | 1.3:+75952487 | MS.gene74980:CDS |
| GAGATCGAGCTATAAGAGAT+TGG | 0.427593 | 1.3:+75954191 | MS.gene74980:CDS |
| AGCCCATCCAATAGAATCAT+TGG | 0.430568 | 1.3:-75953508 | None:intergenic |
| GAAATAGAATCAAGTGGTAA+AGG | 0.437381 | 1.3:+75956011 | MS.gene74980:CDS |
| CAGGTTTATATTGATACAGT+TGG | 0.452563 | 1.3:+75953964 | MS.gene74980:intron |
| TTCGCTTCTCCTCTTGGATG+TGG | 0.454880 | 1.3:-75955988 | None:intergenic |
| AAGGTGGCACTGAAGTCTTA+TGG | 0.459123 | 1.3:+75954470 | MS.gene74980:CDS |
| GTGATCTTCTAGCCAAGACT+TGG | 0.469330 | 1.3:-75954380 | None:intergenic |
| AAATAGAATCAAGTGGTAAA+GGG | 0.471476 | 1.3:+75956012 | MS.gene74980:CDS |
| TGCCATGGGCCTCGTTGATA+GGG | 0.471507 | 1.3:+75953707 | MS.gene74980:CDS |
| GTTGATAGGGTGCTCAAAAT+GGG | 0.472159 | 1.3:+75953720 | MS.gene74980:CDS |
| ATACTTGCACCACTGACAAC+AGG | 0.477284 | 1.3:-75954072 | None:intergenic |
| AACTTTGGCTCTGGATATCC+CGG | 0.481184 | 1.3:+75954247 | MS.gene74980:CDS |
| GCTGGAAGAGGTCCTGTCCT+TGG | 0.487213 | 1.3:+75952479 | MS.gene74980:CDS |
| AGCTTCGCTTCATATTTCCC+TGG | 0.499923 | 1.3:-75953991 | None:intergenic |
| ATTCACAGGAACTTTGGCTC+TGG | 0.501553 | 1.3:+75954238 | MS.gene74980:CDS |
| AGATCGAGCTATAAGAGATT+GGG | 0.506461 | 1.3:+75954192 | MS.gene74980:CDS |
| AATGGGATCTGAAGCTGGTA+TGG | 0.510572 | 1.3:+75952412 | None:intergenic |
| GACACTAAAAGAAGAGAAGA+GGG | 0.517003 | 1.3:+75953461 | MS.gene74980:CDS |
| TAGATCCTGCAACCAAGTCT+TGG | 0.525753 | 1.3:+75954368 | MS.gene74980:intron |
| AAGCCAATGATTCTATTGGA+TGG | 0.528501 | 1.3:+75953505 | MS.gene74980:CDS |
| TGCGAAACTCAAAGTAGCTA+AGG | 0.529377 | 1.3:-75952549 | None:intergenic |
| AAGCTGGTATGGTTCCGGAA+TGG | 0.529747 | 1.3:+75952423 | MS.gene74980:CDS |
| TATGGTTCCGGAATGGGCAT+CGG | 0.530630 | 1.3:+75952430 | MS.gene74980:CDS |
| GCGGAAATGGGATCTGAAGC+TGG | 0.548358 | 1.3:+75952407 | None:intergenic |
| TTAGCTACTTTGAGTTTCGC+AGG | 0.563355 | 1.3:+75952551 | MS.gene74980:CDS |
| GGAATCGACGAAGCTGGAAG+AGG | 0.571188 | 1.3:+75952467 | MS.gene74980:CDS |
| AGTCTGCTGATAACATTCAC+AGG | 0.575679 | 1.3:+75954224 | MS.gene74980:CDS |
| AGACACTAAAAGAAGAGAAG+AGG | 0.576756 | 1.3:+75953460 | MS.gene74980:CDS |
| TGGTGCAAGTATAGTTGCAA+AGG | 0.593002 | 1.3:+75954083 | MS.gene74980:CDS |
| GGTTCCGGAATGGGCATCGG+AGG | 0.593246 | 1.3:+75952433 | MS.gene74980:CDS |
| TTGATACAGTTGGAGATCCA+GGG | 0.597039 | 1.3:+75953974 | MS.gene74980:CDS |
| CACCCTATCAACGAGGCCCA+TGG | 0.597149 | 1.3:-75953709 | None:intergenic |
| AGCCAATGATTCTATTGGAT+GGG | 0.597314 | 1.3:+75953506 | MS.gene74980:CDS |
| GATATCACATGACTCTGCCA+TGG | 0.604388 | 1.3:+75953692 | MS.gene74980:CDS |
| TATAAACAACCATAGACCAT+AGG | 0.606448 | 1.3:-75952503 | None:intergenic |
| AGTCTTTATCCTGTTGTCAG+TGG | 0.607604 | 1.3:+75954063 | MS.gene74980:CDS |
| TGTTGATGTCATTGACCCAA+AGG | 0.610587 | 1.3:+75953530 | MS.gene74980:CDS |
| ATATCACATGACTCTGCCAT+GGG | 0.613919 | 1.3:+75953693 | MS.gene74980:CDS |
| ACATTAGTCAGGTTTAGTTG+GGG | 0.616439 | 1.3:+75954427 | MS.gene74980:CDS |
| GCAATAATAATAATGGCAAG+AGG | 0.617191 | 1.3:+75955937 | MS.gene74980:CDS |
| GAGTCTGACTTGGATGAAGA+TGG | 0.620122 | 1.3:+75955909 | MS.gene74980:CDS |
| AGCGAAGAAATAGAATCAAG+TGG | 0.622154 | 1.3:+75956005 | MS.gene74980:CDS |
| ATAATGGGAATCGACGAAGC+TGG | 0.629515 | 1.3:+75952461 | MS.gene74980:CDS |
| TAGACCATAGGACCAAGGAC+AGG | 0.637946 | 1.3:-75952491 | None:intergenic |
| TGGGTTTCACCACATCCAAG+AGG | 0.671053 | 1.3:+75955979 | MS.gene74980:CDS |
| AACCATAGACCATAGGACCA+AGG | 0.685457 | 1.3:-75952496 | None:intergenic |
| TTTGGCTCTGGATATCCCGG+AGG | 0.726118 | 1.3:+75954250 | MS.gene74980:CDS |
| TCTGACTTGGATGAAGATGG+TGG | 0.731629 | 1.3:+75955912 | MS.gene74980:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ACAAGAATTATAATTAAAAA+TGG | - | chr1.3:75952643-75952662 | None:intergenic | 10.0% |
| !! | ATTAAATTCCATTATGTATA+TGG | + | chr1.3:75955786-75955805 | MS.gene74980:intron | 15.0% |
| !! | CAATTGAAATTAAACAATTT+GGG | + | chr1.3:75955960-75955979 | MS.gene74980:CDS | 15.0% |
| !! | CTTATTTATCTGTTAAAATT+TGG | + | chr1.3:75955873-75955892 | MS.gene74980:intron | 15.0% |
| !! | TTAAATTCCATTATGTATAT+GGG | + | chr1.3:75955787-75955806 | MS.gene74980:intron | 15.0% |
| !!! | AAAATTTGGACTTTTTTATA+GGG | + | chr1.3:75955887-75955906 | MS.gene74980:intron | 15.0% |
| !!! | AGAAAAGTATATTAATTTTC+AGG | + | chr1.3:75955314-75955333 | MS.gene74980:intron | 15.0% |
| !!! | CATTTTAGTTACAATAAATA+TGG | + | chr1.3:75954328-75954347 | MS.gene74980:intron | 15.0% |
| !!! | CTTTCTTTTCAATTTAATTA+TGG | + | chr1.3:75953623-75953642 | MS.gene74980:intron | 15.0% |
| !!! | TAAAATTTGGACTTTTTTAT+AGG | + | chr1.3:75955886-75955905 | MS.gene74980:intron | 15.0% |
| !! | AAAAAAACAGCAAAAACAAA+AGG | - | chr1.3:75953601-75953620 | None:intergenic | 20.0% |
| !! | AGATGTGAAATGTATAATTT+GGG | + | chr1.3:75953936-75953955 | MS.gene74980:intron | 20.0% |
| !! | ATGAGAAATATATTGTTTGT+GGG | - | chr1.3:75955749-75955768 | None:intergenic | 20.0% |
| !! | CTACTATCATTAATTCATTA+TGG | - | chr1.3:75953357-75953376 | None:intergenic | 20.0% |
| !! | GCAATTGAAATTAAACAATT+TGG | + | chr1.3:75955959-75955978 | MS.gene74980:CDS | 20.0% |
| !! | TAAATTCCATTATGTATATG+GGG | + | chr1.3:75955788-75955807 | MS.gene74980:intron | 20.0% |
| !! | TCATTTGATAAGTATTAAGT+AGG | + | chr1.3:75955529-75955548 | MS.gene74980:intron | 20.0% |
| !! | TTCCTGTTAAAATTACAATA+AGG | - | chr1.3:75953654-75953673 | None:intergenic | 20.0% |
| !!! | CAATAAATATGGTTATGTTT+TGG | + | chr1.3:75954339-75954358 | MS.gene74980:intron | 20.0% |
| !!! | TATTTGAAACTTTTGTTTCT+GGG | + | chr1.3:75955193-75955212 | MS.gene74980:intron | 20.0% |
| !!! | TTATTTGAAACTTTTGTTTC+TGG | + | chr1.3:75955192-75955211 | MS.gene74980:intron | 20.0% |
| !!! | TTCCTTATTGTAATTTTAAC+AGG | + | chr1.3:75953649-75953668 | MS.gene74980:intron | 20.0% |
| !!! | TTGATTTGATATTGTTATTC+TGG | - | chr1.3:75955088-75955107 | None:intergenic | 20.0% |
| !!! | TTTTCCCAACATATTTTAAT+GGG | + | chr1.3:75953766-75953785 | MS.gene74980:intron | 20.0% |
| ! | AAAACAAACTCAAAATAAGG+TGG | - | chr1.3:75954617-75954636 | None:intergenic | 25.0% |
| ! | AAATAGAATCAAGTGGTAAA+GGG | + | chr1.3:75956012-75956031 | MS.gene74980:CDS | 25.0% |
| ! | AATTCCAAAAATTACAAACG+TGG | - | chr1.3:75955119-75955138 | None:intergenic | 25.0% |
| ! | ATATTTCTCATGAAAGATGA+AGG | + | chr1.3:75955758-75955777 | MS.gene74980:intron | 25.0% |
| ! | ATTCCAAAAATTACAAACGT+GGG | - | chr1.3:75955118-75955137 | None:intergenic | 25.0% |
| ! | CATGAGAAATATATTGTTTG+TGG | - | chr1.3:75955750-75955769 | None:intergenic | 25.0% |
| ! | CATTAAAATATGTTGGGAAA+AGG | - | chr1.3:75953767-75953786 | None:intergenic | 25.0% |
| ! | CTATAACATATCAACTATCA+AGG | - | chr1.3:75955397-75955416 | None:intergenic | 25.0% |
| ! | CTGAAAACAAACTCAAAATA+AGG | - | chr1.3:75954620-75954639 | None:intergenic | 25.0% |
| ! | GAGATGTGAAATGTATAATT+TGG | + | chr1.3:75953935-75953954 | MS.gene74980:intron | 25.0% |
| ! | TAAACCATCAAATTCAATCT+GGG | + | chr1.3:75952774-75952793 | MS.gene74980:intron | 25.0% |
| ! | TAACACTTGGAACATAAAAA+TGG | - | chr1.3:75955836-75955855 | None:intergenic | 25.0% |
| ! | TAATTAAAAATGGAAAGCTC+TGG | - | chr1.3:75952633-75952652 | None:intergenic | 25.0% |
| ! | TCTTCCCATTAAAATATGTT+GGG | - | chr1.3:75953773-75953792 | None:intergenic | 25.0% |
| ! | TGAGAAATATATTGTTTGTG+GGG | - | chr1.3:75955748-75955767 | None:intergenic | 25.0% |
| ! | TTCTTCCCATTAAAATATGT+TGG | - | chr1.3:75953774-75953793 | None:intergenic | 25.0% |
| !! | AAAGTACTACTCAAGTTTAA+GGG | + | chr1.3:75952838-75952857 | MS.gene74980:intron | 25.0% |
| !! | AATGATTCTAGTTACTTAAG+TGG | - | chr1.3:75955291-75955310 | None:intergenic | 25.0% |
| !! | ATGATTCTAGTTACTTAAGT+GGG | - | chr1.3:75955290-75955309 | None:intergenic | 25.0% |
| !! | CTTGATAGTTGATATGTTAT+AGG | + | chr1.3:75955395-75955414 | MS.gene74980:intron | 25.0% |
| !! | TCAGTTTTCAAAACATTTTC+TGG | + | chr1.3:75954636-75954655 | MS.gene74980:intron | 25.0% |
| !! | TGATATATGATAGAGCATTA+TGG | + | chr1.3:75953216-75953235 | MS.gene74980:intron | 25.0% |
| !! | TTTTCCATCTATCAAATTTG+TGG | + | chr1.3:75954023-75954042 | MS.gene74980:CDS | 25.0% |
| !! | TTTTTCACTTCCTTAGTTTA+CGG | + | chr1.3:75955042-75955061 | MS.gene74980:intron | 25.0% |
| !!! | CTTTTCCCAACATATTTTAA+TGG | + | chr1.3:75953765-75953784 | MS.gene74980:intron | 25.0% |
| !!! | GTTTGGTTTCATAACATTTT+CGG | + | chr1.3:75954559-75954578 | MS.gene74980:intron | 25.0% |
| !!! | TGTTTACTTTTTGAGCATTT+TGG | - | chr1.3:75953565-75953584 | None:intergenic | 25.0% |
| !!! | TTGTTTTCTAAGGATTTGTT+TGG | + | chr1.3:75954542-75954561 | MS.gene74980:intron | 25.0% |
| !!! | TTTGGTTTCATAACATTTTC+GGG | + | chr1.3:75954560-75954579 | MS.gene74980:intron | 25.0% |
| AAAAATTACAAACGTGGGAT+TGG | - | chr1.3:75955113-75955132 | None:intergenic | 30.0% | |
| AAATATATTGTTTGTGGGGT+GGG | - | chr1.3:75955744-75955763 | None:intergenic | 30.0% | |
| AAATCCTTAGAAAACAAGTG+CGG | - | chr1.3:75954539-75954558 | None:intergenic | 30.0% | |
| AACATGAAGTTAGTGGAATT+TGG | - | chr1.3:75955255-75955274 | None:intergenic | 30.0% | |
| AACATTAGTCAGGTTTAGTT+GGG | + | chr1.3:75954426-75954445 | MS.gene74980:CDS | 30.0% | |
| AATGAAAACAGAAACCAAAG+AGG | + | chr1.3:75954762-75954781 | MS.gene74980:intron | 30.0% | |
| AGCACCTATATTAGAAAAGA+TGG | + | chr1.3:75953031-75953050 | MS.gene74980:intron | 30.0% | |
| ATCTTTCAAAGTTACTTGTG+AGG | + | chr1.3:75955492-75955511 | MS.gene74980:intron | 30.0% | |
| ATGACATTAAAGAGAGAGTT+CGG | + | chr1.3:75953006-75953025 | MS.gene74980:intron | 30.0% | |
| ATTAATGTTGACATACTGCT+AGG | + | chr1.3:75954911-75954930 | MS.gene74980:intron | 30.0% | |
| ATTGGATAACATGAAGTTAG+TGG | - | chr1.3:75955262-75955281 | None:intergenic | 30.0% | |
| CACCTATATTAGAAAAGATG+GGG | + | chr1.3:75953033-75953052 | MS.gene74980:intron | 30.0% | |
| CAGGTTTATATTGATACAGT+TGG | + | chr1.3:75953964-75953983 | MS.gene74980:intron | 30.0% | |
| CTGAACAGAACAGTATAAAA+AGG | - | chr1.3:75954800-75954819 | None:intergenic | 30.0% | |
| GAAATAGAATCAAGTGGTAA+AGG | + | chr1.3:75956011-75956030 | MS.gene74980:CDS | 30.0% | |
| GATCACAAACATTCTATCTT+TGG | + | chr1.3:75954397-75954416 | MS.gene74980:CDS | 30.0% | |
| GCAATAATAATAATGGCAAG+AGG | + | chr1.3:75955937-75955956 | MS.gene74980:CDS | 30.0% | |
| GCACCTATATTAGAAAAGAT+GGG | + | chr1.3:75953032-75953051 | MS.gene74980:intron | 30.0% | |
| GCAGTATGTCAACATTAATA+TGG | - | chr1.3:75954910-75954929 | None:intergenic | 30.0% | |
| GTAAACCATCAAATTCAATC+TGG | + | chr1.3:75952773-75952792 | MS.gene74980:intron | 30.0% | |
| TACGCTTCTTATAAGTACTT+GGG | + | chr1.3:75953879-75953898 | MS.gene74980:intron | 30.0% | |
| TATAAACAACCATAGACCAT+AGG | - | chr1.3:75952506-75952525 | None:intergenic | 30.0% | |
| TTGAAAGCCAATGATTCTAT+TGG | + | chr1.3:75953501-75953520 | MS.gene74980:CDS | 30.0% | |
| TTTCCTTTGTTGACAACAAA+AGG | - | chr1.3:75955579-75955598 | None:intergenic | 30.0% | |
| ! | AACCTTTAATCCAACCTTTT+AGG | + | chr1.3:75954162-75954181 | MS.gene74980:intron | 30.0% |
| ! | AATCCCACGTTTGTAATTTT+TGG | + | chr1.3:75955112-75955131 | MS.gene74980:intron | 30.0% |
| ! | AGTTTTCCCCATATACATAA+TGG | - | chr1.3:75955797-75955816 | None:intergenic | 30.0% |
| ! | ATCCATACGACATATTTTGT+TGG | - | chr1.3:75953856-75953875 | None:intergenic | 30.0% |
| ! | TGATTCTAGTTACTTAAGTG+GGG | - | chr1.3:75955289-75955308 | None:intergenic | 30.0% |
| ! | TTCCCCATCTTTTCTAATAT+AGG | - | chr1.3:75953038-75953057 | None:intergenic | 30.0% |
| ! | TTTTCACTTCCTTAGTTTAC+GGG | + | chr1.3:75955043-75955062 | MS.gene74980:intron | 30.0% |
| !! | AAAAAAGTGACTTGTTTCTG+TGG | - | chr1.3:75955468-75955487 | None:intergenic | 30.0% |
| !! | AAAGGCACTGCAAAAAATAT+AGG | - | chr1.3:75955561-75955580 | None:intergenic | 30.0% |
| !! | GAAAGTACTACTCAAGTTTA+AGG | + | chr1.3:75952837-75952856 | MS.gene74980:intron | 30.0% |
| !!! | ACTTGCAGCTCTTATTTTAA+AGG | + | chr1.3:75954451-75954470 | MS.gene74980:CDS | 30.0% |
| !!! | TCAAAGTAGCTAAGGTTTTT+TGG | - | chr1.3:75952544-75952563 | None:intergenic | 30.0% |
| AAAGCTGTAGGTATTATGCT+TGG | + | chr1.3:75955652-75955671 | MS.gene74980:intron | 35.0% | |
| AAGCCAATGATTCTATTGGA+TGG | + | chr1.3:75953505-75953524 | MS.gene74980:CDS | 35.0% | |
| AATATATTGTTTGTGGGGTG+GGG | - | chr1.3:75955743-75955762 | None:intergenic | 35.0% | |
| ACATTAGTCAGGTTTAGTTG+GGG | + | chr1.3:75954427-75954446 | MS.gene74980:CDS | 35.0% | |
| AGACACTAAAAGAAGAGAAG+AGG | + | chr1.3:75953460-75953479 | MS.gene74980:CDS | 35.0% | |
| AGATCGAGCTATAAGAGATT+GGG | + | chr1.3:75954192-75954211 | MS.gene74980:CDS | 35.0% | |
| AGATCTAGAGATTAACGAGT+TGG | + | chr1.3:75953184-75953203 | MS.gene74980:intron | 35.0% | |
| AGCCAATGATTCTATTGGAT+GGG | + | chr1.3:75953506-75953525 | MS.gene74980:CDS | 35.0% | |
| AGCGAAGAAATAGAATCAAG+TGG | + | chr1.3:75956005-75956024 | MS.gene74980:CDS | 35.0% | |
| AGTAAGGAGAGTAGATCAAA+TGG | + | chr1.3:75953109-75953128 | MS.gene74980:intron | 35.0% | |
| AGTGAAATAGTCCTTGAGAA+AGG | + | chr1.3:75955368-75955387 | MS.gene74980:intron | 35.0% | |
| ATGTATAATTTGGGCTCTTC+AGG | + | chr1.3:75953945-75953964 | MS.gene74980:intron | 35.0% | |
| CAAAGTTTGTAAGAGAAGAC+TGG | - | chr1.3:75955691-75955710 | None:intergenic | 35.0% | |
| CAAATTTGTGGTTGCAAAGA+AGG | + | chr1.3:75954035-75954054 | MS.gene74980:CDS | 35.0% | |
| CAACATTAGTCAGGTTTAGT+TGG | + | chr1.3:75954425-75954444 | MS.gene74980:CDS | 35.0% | |
| CAACTAAACCTGACTAATGT+TGG | - | chr1.3:75954427-75954446 | None:intergenic | 35.0% | |
| CAGCAAAAACAAAAGGAGTA+AGG | - | chr1.3:75953594-75953613 | None:intergenic | 35.0% | |
| CTTATCCTGCTAAGTAGAAT+CGG | - | chr1.3:75953261-75953280 | None:intergenic | 35.0% | |
| GAAATATATTGTTTGTGGGG+TGG | - | chr1.3:75955745-75955764 | None:intergenic | 35.0% | |
| GACACTAAAAGAAGAGAAGA+GGG | + | chr1.3:75953461-75953480 | MS.gene74980:CDS | 35.0% | |
| GACCTAAAAGGTTGGATTAA+AGG | - | chr1.3:75954167-75954186 | None:intergenic | 35.0% | |
| GATAACATTCACAGGAACTT+TGG | + | chr1.3:75954232-75954251 | MS.gene74980:CDS | 35.0% | |
| GCAACCACAAATTTGATAGA+TGG | - | chr1.3:75954030-75954049 | None:intergenic | 35.0% | |
| GGTGGCAGCAATAATAATAA+TGG | + | chr1.3:75955930-75955949 | MS.gene74980:CDS | 35.0% | |
| GGTTTGTAGATGTTGTAGTA+AGG | + | chr1.3:75953093-75953112 | MS.gene74980:intron | 35.0% | |
| GTACGCTTCTTATAAGTACT+TGG | + | chr1.3:75953878-75953897 | MS.gene74980:intron | 35.0% | |
| GTTGTGAAAATAGCACAAGT+TGG | - | chr1.3:75955424-75955443 | None:intergenic | 35.0% | |
| TAGAAAAGATGGGGAAAACT+AGG | + | chr1.3:75953042-75953061 | MS.gene74980:intron | 35.0% | |
| TATCAAGGATACCTTTCTCA+AGG | - | chr1.3:75955382-75955401 | None:intergenic | 35.0% | |
| TCAATAATCCTGAAAGCTGT+AGG | + | chr1.3:75955640-75955659 | MS.gene74980:intron | 35.0% | |
| TGAAGTTAAGAGAAGAGAGT+AGG | - | chr1.3:75952579-75952598 | None:intergenic | 35.0% | |
| TGACATTAAAGAGAGAGTTC+GGG | + | chr1.3:75953007-75953026 | MS.gene74980:intron | 35.0% | |
| TGCCAACAAAATATGTCGTA+TGG | + | chr1.3:75953851-75953870 | MS.gene74980:intron | 35.0% | |
| TGTCACATTTGCATCTTTGT+TGG | + | chr1.3:75953426-75953445 | MS.gene74980:intron | 35.0% | |
| TTAGTGCAGGAAATTCTACA+CGG | - | chr1.3:75954121-75954140 | None:intergenic | 35.0% | |
| TTCAACCGACACATAGAAAT+AGG | + | chr1.3:75952742-75952761 | MS.gene74980:intron | 35.0% | |
| TTGAAGCATGAACAATGCAT+GGG | + | chr1.3:75955714-75955733 | MS.gene74980:intron | 35.0% | |
| TTTGTTTGCCATACTTTCCA+CGG | + | chr1.3:75954837-75954856 | MS.gene74980:intron | 35.0% | |
| ! | ATTCTAGTTACTTAAGTGGG+GGG | - | chr1.3:75955287-75955306 | None:intergenic | 35.0% |
| ! | GATTCTAGTTACTTAAGTGG+GGG | - | chr1.3:75955288-75955307 | None:intergenic | 35.0% |
| ! | TTTTTATAGGGAGTCTGACT+TGG | + | chr1.3:75955899-75955918 | MS.gene74980:intron | 35.0% |
| !! | AATTACTTTTACAGCCCAAG+AGG | - | chr1.3:75955146-75955165 | None:intergenic | 35.0% |
| !! | CATCTCCTATTTCTATGTGT+CGG | - | chr1.3:75952750-75952769 | None:intergenic | 35.0% |
| !! | TATACCGCACTTGTTTTCTA+AGG | + | chr1.3:75954532-75954551 | MS.gene74980:intron | 35.0% |
| !! | TTGGTTTTCCAACATTAGTC+AGG | + | chr1.3:75954416-75954435 | MS.gene74980:CDS | 35.0% |
| !!! | AGTAGCTAAGGTTTTTTGGT+AGG | - | chr1.3:75952540-75952559 | None:intergenic | 35.0% |
| !!! | TGCAGCTCTTATTTTAAAGG+TGG | + | chr1.3:75954454-75954473 | MS.gene74980:CDS | 35.0% |
| !!! | TTTTGGAATTTGCTCCTCTT+GGG | + | chr1.3:75955129-75955148 | MS.gene74980:intron | 35.0% |
| !!! | TTTTTGGAATTTGCTCCTCT+TGG | + | chr1.3:75955128-75955147 | MS.gene74980:intron | 35.0% |
| AAGGAGAGTAGATCAAATGG+AGG | + | chr1.3:75953112-75953131 | MS.gene74980:intron | 40.0% | |
| AAGGTTGGATTAAAGGTTGC+AGG | - | chr1.3:75954160-75954179 | None:intergenic | 40.0% | |
| AATCAGATCACTAGAGGTAG+AGG | + | chr1.3:75953137-75953156 | MS.gene74980:intron | 40.0% | |
| ACCACCCAGATTGAATTTGA+TGG | - | chr1.3:75952781-75952800 | None:intergenic | 40.0% | |
| ACCATCAAATTCAATCTGGG+TGG | + | chr1.3:75952777-75952796 | MS.gene74980:intron | 40.0% | |
| ACGGTAAAACTTCTTAGTGC+AGG | - | chr1.3:75954134-75954153 | None:intergenic | 40.0% | |
| AGATGGGGAAAACTAGGATT+TGG | + | chr1.3:75953048-75953067 | MS.gene74980:intron | 40.0% | |
| AGCAGTTAAGCTGCTTATGA+TGG | - | chr1.3:75954949-75954968 | None:intergenic | 40.0% | |
| AGCCCATCCAATAGAATCAT+TGG | - | chr1.3:75953511-75953530 | None:intergenic | 40.0% | |
| AGTCTGCTGATAACATTCAC+AGG | + | chr1.3:75954224-75954243 | MS.gene74980:CDS | 40.0% | |
| AGTCTTTATCCTGTTGTCAG+TGG | + | chr1.3:75954063-75954082 | MS.gene74980:CDS | 40.0% | |
| ATACAACCACACGTAAACAG+TGG | - | chr1.3:75952719-75952738 | None:intergenic | 40.0% | |
| ATATATTGTTTGTGGGGTGG+GGG | - | chr1.3:75955742-75955761 | None:intergenic | 40.0% | |
| ATATCACATGACTCTGCCAT+GGG | + | chr1.3:75953693-75953712 | MS.gene74980:CDS | 40.0% | |
| ATCTTGAAGCCCGTAAACTA+AGG | - | chr1.3:75955055-75955074 | None:intergenic | 40.0% | |
| ATGTTGTATGGGACAGTGTT+GGG | + | chr1.3:75952883-75952902 | MS.gene74980:intron | 40.0% | |
| ATTGATACAGTTGGAGATCC+AGG | + | chr1.3:75953973-75953992 | MS.gene74980:CDS | 40.0% | |
| CGATTCTACTTAGCAGGATA+AGG | + | chr1.3:75953259-75953278 | MS.gene74980:intron | 40.0% | |
| CTGAGATGAGATTGTTGCAT+TGG | + | chr1.3:75952946-75952965 | MS.gene74980:intron | 40.0% | |
| CTTGAAGCATGAACAATGCA+TGG | + | chr1.3:75955713-75955732 | MS.gene74980:intron | 40.0% | |
| GAGATCGAGCTATAAGAGAT+TGG | + | chr1.3:75954191-75954210 | MS.gene74980:CDS | 40.0% | |
| GAGGATAATCAGATCACTAG+AGG | + | chr1.3:75953131-75953150 | MS.gene74980:intron | 40.0% | |
| GATTAAAGGTTGCAGGTAGA+CGG | - | chr1.3:75954153-75954172 | None:intergenic | 40.0% | |
| GCATAATACCTACAGCTTTC+AGG | - | chr1.3:75955651-75955670 | None:intergenic | 40.0% | |
| GTATACAGTCACAGAATGCA+TGG | - | chr1.3:75954517-75954536 | None:intergenic | 40.0% | |
| TAGTGCAGGAAATTCTACAC+GGG | - | chr1.3:75954120-75954139 | None:intergenic | 40.0% | |
| TATGTACCATTGACACAGAC+AGG | - | chr1.3:75953320-75953339 | None:intergenic | 40.0% | |
| TATTTCTTCGCTTCTCCTCT+TGG | - | chr1.3:75955997-75956016 | None:intergenic | 40.0% | |
| TCGATCTCTTGTGACCTAAA+AGG | - | chr1.3:75954179-75954198 | None:intergenic | 40.0% | |
| TCTCTTGTGACCTAAAAGGT+TGG | - | chr1.3:75954175-75954194 | None:intergenic | 40.0% | |
| TGCGAAACTCAAAGTAGCTA+AGG | - | chr1.3:75952552-75952571 | None:intergenic | 40.0% | |
| TGGTGCAAGTATAGTTGCAA+AGG | + | chr1.3:75954083-75954102 | MS.gene74980:CDS | 40.0% | |
| TGTTGATGTCATTGACCCAA+AGG | + | chr1.3:75953530-75953549 | MS.gene74980:CDS | 40.0% | |
| TTACTTAAGTGGGGGGAAAT+TGG | - | chr1.3:75955280-75955299 | None:intergenic | 40.0% | |
| TTATTGCCACTGTTTACGTG+TGG | + | chr1.3:75952710-75952729 | MS.gene74980:intron | 40.0% | |
| TTCAATCTGGGTGGTTGAAA+TGG | + | chr1.3:75952786-75952805 | MS.gene74980:intron | 40.0% | |
| TTGATACAGTTGGAGATCCA+GGG | + | chr1.3:75953974-75953993 | MS.gene74980:CDS | 40.0% | |
| ! | AAAATGGAAAGCTCTGGCAA+TGG | - | chr1.3:75952627-75952646 | None:intergenic | 40.0% |
| ! | ATCTGAAGTCATGTTAGAGC+TGG | - | chr1.3:75953803-75953822 | None:intergenic | 40.0% |
| ! | GTTGATAGGGTGCTCAAAAT+GGG | + | chr1.3:75953720-75953739 | MS.gene74980:CDS | 40.0% |
| ! | TCTGAAGTCATGTTAGAGCT+GGG | - | chr1.3:75953802-75953821 | None:intergenic | 40.0% |
| ! | TTAGCTACTTTGAGTTTCGC+AGG | + | chr1.3:75952551-75952570 | MS.gene74980:CDS | 40.0% |
| ! | TTTTGGCAGAGAGTTCCTTT+GGG | - | chr1.3:75953548-75953567 | None:intergenic | 40.0% |
| !! | ATTTTGGCAGAGAGTTCCTT+TGG | - | chr1.3:75953549-75953568 | None:intergenic | 40.0% |
| !! | GTGCCTTTTGTTGTCAACAA+AGG | + | chr1.3:75955573-75955592 | MS.gene74980:intron | 40.0% |
| !!! | AAGGTTTTTTGGTAGGAGAG+AGG | - | chr1.3:75952533-75952552 | None:intergenic | 40.0% |
| !!! | AATGGGAGTGCTTTTAACTG+AGG | + | chr1.3:75953737-75953756 | MS.gene74980:CDS | 40.0% |
| !!! | GTTCTAGGTTTTTTCAGGCT+CGG | + | chr1.3:75956036-75956055 | MS.gene74980:CDS | 40.0% |
| AAATTCTACACGGGAGAGTG+AGG | - | chr1.3:75954111-75954130 | None:intergenic | 45.0% | |
| AACCATAGACCATAGGACCA+AGG | - | chr1.3:75952499-75952518 | None:intergenic | 45.0% | |
| AATCTGGGTGGTTGAAATGG+TGG | + | chr1.3:75952789-75952808 | MS.gene74980:intron | 45.0% | |
| ACTGTCCCATACAACATCGT+TGG | - | chr1.3:75952880-75952899 | None:intergenic | 45.0% | |
| AGCTTCGCTTCATATTTCCC+TGG | - | chr1.3:75953994-75954013 | None:intergenic | 45.0% | |
| AGTCATGTTAGAGCTGGGAA+AGG | - | chr1.3:75953797-75953816 | None:intergenic | 45.0% | |
| ATACTTGCACCACTGACAAC+AGG | - | chr1.3:75954075-75954094 | None:intergenic | 45.0% | |
| CAAACACACCGTGGAAAGTA+TGG | - | chr1.3:75954848-75954867 | None:intergenic | 45.0% | |
| CGAGACCAACGATGTTGTAT+GGG | + | chr1.3:75952872-75952891 | MS.gene74980:intron | 45.0% | |
| CTAGAGGTAGAGGTAGACTT+AGG | + | chr1.3:75953147-75953166 | MS.gene74980:intron | 45.0% | |
| GATATCACATGACTCTGCCA+TGG | + | chr1.3:75953692-75953711 | MS.gene74980:CDS | 45.0% | |
| GATGTTGTATGGGACAGTGT+TGG | + | chr1.3:75952882-75952901 | MS.gene74980:intron | 45.0% | |
| GGTTTGTGCTTGTAGAGAGA+AGG | + | chr1.3:75953072-75953091 | MS.gene74980:intron | 45.0% | |
| GTGATCTTCTAGCCAAGACT+TGG | - | chr1.3:75954383-75954402 | None:intergenic | 45.0% | |
| TAGATCCTGCAACCAAGTCT+TGG | + | chr1.3:75954368-75954387 | MS.gene74980:intron | 45.0% | |
| TATATTGTTTGTGGGGTGGG+GGG | - | chr1.3:75955741-75955760 | None:intergenic | 45.0% | |
| TGGGGAAAACTAGGATTTGG+TGG | + | chr1.3:75953051-75953070 | MS.gene74980:intron | 45.0% | |
| TGTGTTTGAACTAGGCTGGT+AGG | + | chr1.3:75954860-75954879 | MS.gene74980:intron | 45.0% | |
| TGTTCCAAGTGTTACGTGCT+AGG | + | chr1.3:75955842-75955861 | MS.gene74980:intron | 45.0% | |
| TTCCACGGTGTGTTTGAACT+AGG | + | chr1.3:75954852-75954871 | MS.gene74980:intron | 45.0% | |
| ! | AAGGTGGCACTGAAGTCTTA+TGG | + | chr1.3:75954470-75954489 | MS.gene74980:CDS | 45.0% |
| ! | ATAATGGGAATCGACGAAGC+TGG | + | chr1.3:75952461-75952480 | MS.gene74980:CDS | 45.0% |
| ! | ATCTGAAGCTGGTATGGTTC+CGG | + | chr1.3:75952418-75952437 | MS.gene74980:CDS | 45.0% |
| ! | ATTCACAGGAACTTTGGCTC+TGG | + | chr1.3:75954238-75954257 | MS.gene74980:CDS | 45.0% |
| ! | CCATACAACATCGTTGGTCT+CGG | - | chr1.3:75952874-75952893 | None:intergenic | 45.0% |
| ! | CGTTGATAGGGTGCTCAAAA+TGG | + | chr1.3:75953719-75953738 | MS.gene74980:CDS | 45.0% |
| ! | GTTTCTGTGGTGCTAAGATC+AGG | - | chr1.3:75955455-75955474 | None:intergenic | 45.0% |
| ! | TGTAGCCGATTCTACTTAGC+AGG | + | chr1.3:75953253-75953272 | MS.gene74980:intron | 45.0% |
| ! | TTTTGAGCACCCTATCAACG+AGG | - | chr1.3:75953719-75953738 | None:intergenic | 45.0% |
| !! | AACTTTGGCTCTGGATATCC+CGG | + | chr1.3:75954247-75954266 | MS.gene74980:CDS | 45.0% |
| !! | GAGTCTGACTTGGATGAAGA+TGG | + | chr1.3:75955909-75955928 | MS.gene74980:CDS | 45.0% |
| !! | TCTGACTTGGATGAAGATGG+TGG | + | chr1.3:75955912-75955931 | MS.gene74980:CDS | 45.0% |
| !!! | AGGGCGTTCTAGGTTTTTTC+AGG | + | chr1.3:75956031-75956050 | MS.gene74980:CDS | 45.0% |
| !! | AAATTAAATAAAAGAATAAA+TGG | - | chr1.3:75955019-75955038 | None:intergenic | 5.0% |
| !!! | TTTTAATTAAAATTGAAAAT+AGG | + | chr1.3:75954725-75954744 | MS.gene74980:intron | 5.0% |
| AACGCCTAGCACGTAACACT+TGG | - | chr1.3:75955849-75955868 | None:intergenic | 50.0% | |
| AAGCTGGTATGGTTCCGGAA+TGG | + | chr1.3:75952423-75952442 | MS.gene74980:CDS | 50.0% | |
| ACGGTGTGTTTGAACTAGGC+TGG | + | chr1.3:75954856-75954875 | MS.gene74980:intron | 50.0% | |
| AGCCTAGTTCAAACACACCG+TGG | - | chr1.3:75954857-75954876 | None:intergenic | 50.0% | |
| AGCTGGTATGGTTCCGGAAT+GGG | + | chr1.3:75952424-75952443 | MS.gene74980:CDS | 50.0% | |
| AGTCATGACCTACTCACCTC+CGG | - | chr1.3:75954269-75954288 | None:intergenic | 50.0% | |
| CACTGTCCTGTCTGTGTCAA+TGG | + | chr1.3:75953311-75953330 | MS.gene74980:intron | 50.0% | |
| CCGAGACCAACGATGTTGTA+TGG | + | chr1.3:75952871-75952890 | MS.gene74980:intron | 50.0% | |
| GCATCGGAGGCTTGCATAAT+GGG | + | chr1.3:75952446-75952465 | MS.gene74980:CDS | 50.0% | |
| GGAAAAACGCAGAGCCTCTT+TGG | - | chr1.3:75954779-75954798 | None:intergenic | 50.0% | |
| GTCCTTGGTCCTATGGTCTA+TGG | + | chr1.3:75952494-75952513 | MS.gene74980:CDS | 50.0% | |
| TAGACCATAGGACCAAGGAC+AGG | - | chr1.3:75952494-75952513 | None:intergenic | 50.0% | |
| TATGGTTCCGGAATGGGCAT+CGG | + | chr1.3:75952430-75952449 | MS.gene74980:CDS | 50.0% | |
| TGGGTTTCACCACATCCAAG+AGG | + | chr1.3:75955979-75955998 | MS.gene74980:CDS | 50.0% | |
| TTCGCTTCTCCTCTTGGATG+TGG | - | chr1.3:75955991-75956010 | None:intergenic | 50.0% | |
| ! | TCTAGCCAAGACTTGGTTGC+AGG | - | chr1.3:75954376-75954395 | None:intergenic | 50.0% |
| !! | CAAGTGGTAAAGGGCGTTCT+AGG | + | chr1.3:75956021-75956040 | MS.gene74980:CDS | 50.0% |
| AGGTCCTGTCCTTGGTCCTA+TGG | + | chr1.3:75952487-75952506 | MS.gene74980:CDS | 55.0% | |
| GGAATCGACGAAGCTGGAAG+AGG | + | chr1.3:75952467-75952486 | MS.gene74980:CDS | 55.0% | |
| GTCATGACCTACTCACCTCC+GGG | - | chr1.3:75954268-75954287 | None:intergenic | 55.0% | |
| TGCCATGGGCCTCGTTGATA+GGG | + | chr1.3:75953707-75953726 | MS.gene74980:CDS | 55.0% | |
| TGGATATCCCGGAGGTGAGT+AGG | + | chr1.3:75954258-75954277 | MS.gene74980:intron | 55.0% | |
| ! | GGCATCGGAGGCTTGCATAA+TGG | + | chr1.3:75952445-75952464 | MS.gene74980:CDS | 55.0% |
| !! | TTTGGCTCTGGATATCCCGG+AGG | + | chr1.3:75954250-75954269 | MS.gene74980:CDS | 55.0% |
| CAAGCCTCCGATGCCCATTC+CGG | - | chr1.3:75952440-75952459 | None:intergenic | 60.0% | |
| CACCCTATCAACGAGGCCCA+TGG | - | chr1.3:75953712-75953731 | None:intergenic | 60.0% | |
| CTGCCATGGGCCTCGTTGAT+AGG | + | chr1.3:75953706-75953725 | MS.gene74980:CDS | 60.0% | |
| GCTGGAAGAGGTCCTGTCCT+TGG | + | chr1.3:75952479-75952498 | MS.gene74980:CDS | 60.0% | |
| !! | GGTTCCGGAATGGGCATCGG+AGG | + | chr1.3:75952433-75952452 | MS.gene74980:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 75952413 | 75956085 | 75952413 | ID=MS.gene74980 |
| chr1.3 | mRNA | 75952413 | 75956085 | 75952413 | ID=MS.gene74980.t1;Parent=MS.gene74980 |
| chr1.3 | exon | 75952413 | 75952572 | 75952413 | ID=MS.gene74980.t1.exon1;Parent=MS.gene74980.t1 |
| chr1.3 | CDS | 75952413 | 75952572 | 75952413 | ID=cds.MS.gene74980.t1;Parent=MS.gene74980.t1 |
| chr1.3 | exon | 75953454 | 75953577 | 75953454 | ID=MS.gene74980.t1.exon2;Parent=MS.gene74980.t1 |
| chr1.3 | CDS | 75953454 | 75953577 | 75953454 | ID=cds.MS.gene74980.t1;Parent=MS.gene74980.t1 |
| chr1.3 | exon | 75953671 | 75953758 | 75953671 | ID=MS.gene74980.t1.exon3;Parent=MS.gene74980.t1 |
| chr1.3 | CDS | 75953671 | 75953758 | 75953671 | ID=cds.MS.gene74980.t1;Parent=MS.gene74980.t1 |
| chr1.3 | exon | 75953967 | 75954104 | 75953967 | ID=MS.gene74980.t1.exon4;Parent=MS.gene74980.t1 |
| chr1.3 | CDS | 75953967 | 75954104 | 75953967 | ID=cds.MS.gene74980.t1;Parent=MS.gene74980.t1 |
| chr1.3 | exon | 75954184 | 75954271 | 75954184 | ID=MS.gene74980.t1.exon5;Parent=MS.gene74980.t1 |
| chr1.3 | CDS | 75954184 | 75954271 | 75954184 | ID=cds.MS.gene74980.t1;Parent=MS.gene74980.t1 |
| chr1.3 | exon | 75954371 | 75954491 | 75954371 | ID=MS.gene74980.t1.exon6;Parent=MS.gene74980.t1 |
| chr1.3 | CDS | 75954371 | 75954491 | 75954371 | ID=cds.MS.gene74980.t1;Parent=MS.gene74980.t1 |
| chr1.3 | exon | 75955908 | 75956085 | 75955908 | ID=MS.gene74980.t1.exon7;Parent=MS.gene74980.t1 |
| chr1.3 | CDS | 75955908 | 75956085 | 75955908 | ID=cds.MS.gene74980.t1;Parent=MS.gene74980.t1 |
| Gene Sequence |
| Protein sequence |
