Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene47437.t1 | XP_013468121.1 | 96.8 | 220 | 7 | 0 | 21 | 240 | 34 | 253 | 3.00E-124 | 454.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene47437.t1 | Q8L817 | 53.4 | 221 | 98 | 2 | 21 | 240 | 35 | 251 | 3.1e-69 | 263.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene47437.t1 | A0A072VL48 | 96.8 | 220 | 7 | 0 | 21 | 240 | 34 | 253 | 2.2e-124 | 454.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049171 | MS.gene47437 | -0.853557 | 2.21E-61 | -1.69E-46 |
| MS.gene049217 | MS.gene47437 | -0.82365 | 1.24E-53 | -1.69E-46 |
| MS.gene049222 | MS.gene47437 | -0.861209 | 1.21E-63 | -1.69E-46 |
| MS.gene049232 | MS.gene47437 | -0.809315 | 2.01E-50 | -1.69E-46 |
| MS.gene049285 | MS.gene47437 | -0.833015 | 6.80E-56 | -1.69E-46 |
| MS.gene049320 | MS.gene47437 | -0.841117 | 5.77E-58 | -1.69E-46 |
| MS.gene04932 | MS.gene47437 | 0.822879 | 1.87E-53 | -1.69E-46 |
| MS.gene049549 | MS.gene47437 | 0.821033 | 5.01E-53 | -1.69E-46 |
| MS.gene049611 | MS.gene47437 | 0.818053 | 2.40E-52 | -1.69E-46 |
| MS.gene049633 | MS.gene47437 | -0.859232 | 4.77E-63 | -1.69E-46 |
| MS.gene049634 | MS.gene47437 | 0.838095 | 3.52E-57 | -1.69E-46 |
| MS.gene049805 | MS.gene47437 | -0.81236 | 4.41E-51 | -1.69E-46 |
| MS.gene050163 | MS.gene47437 | -0.832462 | 9.33E-56 | -1.69E-46 |
| MS.gene050165 | MS.gene47437 | -0.835768 | 1.38E-56 | -1.69E-46 |
| MS.gene050170 | MS.gene47437 | -0.839705 | 1.35E-57 | -1.69E-46 |
| MS.gene050323 | MS.gene47437 | -0.843056 | 1.77E-58 | -1.69E-46 |
| MS.gene050333 | MS.gene47437 | -0.825099 | 5.64E-54 | -1.69E-46 |
| MS.gene050338 | MS.gene47437 | 0.818905 | 1.54E-52 | -1.69E-46 |
| MS.gene050381 | MS.gene47437 | 0.84401 | 9.85E-59 | -1.69E-46 |
| MS.gene050444 | MS.gene47437 | -0.843933 | 1.03E-58 | -1.69E-46 |
| MS.gene050496 | MS.gene47437 | -0.832498 | 9.14E-56 | -1.69E-46 |
| MS.gene050504 | MS.gene47437 | -0.866195 | 3.40E-65 | -1.69E-46 |
| MS.gene050518 | MS.gene47437 | -0.826597 | 2.49E-54 | -1.69E-46 |
| MS.gene050577 | MS.gene47437 | -0.878738 | 2.20E-69 | -1.69E-46 |
| MS.gene050612 | MS.gene47437 | -0.868452 | 6.46E-66 | -1.69E-46 |
| MS.gene050647 | MS.gene47437 | 0.80522 | 1.48E-49 | -1.69E-46 |
| MS.gene050675 | MS.gene47437 | -0.841392 | 4.89E-58 | -1.69E-46 |
| MS.gene050699 | MS.gene47437 | -0.837025 | 6.63E-57 | -1.69E-46 |
| MS.gene050710 | MS.gene47437 | 0.804288 | 2.32E-49 | -1.69E-46 |
| MS.gene050720 | MS.gene47437 | 0.826896 | 2.11E-54 | -1.69E-46 |
| MS.gene050722 | MS.gene47437 | 0.800732 | 1.26E-48 | -1.69E-46 |
| MS.gene050725 | MS.gene47437 | 0.802404 | 5.70E-49 | -1.69E-46 |
| MS.gene050747 | MS.gene47437 | -0.837494 | 5.03E-57 | -1.69E-46 |
| MS.gene050772 | MS.gene47437 | -0.803549 | 3.31E-49 | -1.69E-46 |
| MS.gene05079 | MS.gene47437 | 0.822962 | 1.79E-53 | -1.69E-46 |
| MS.gene050809 | MS.gene47437 | 0.831042 | 2.09E-55 | -1.69E-46 |
| MS.gene05080 | MS.gene47437 | -0.851651 | 7.73E-61 | -1.69E-46 |
| MS.gene050868 | MS.gene47437 | -0.867313 | 1.50E-65 | -1.69E-46 |
| MS.gene050871 | MS.gene47437 | -0.86478 | 9.50E-65 | -1.69E-46 |
| MS.gene050904 | MS.gene47437 | -0.850124 | 2.08E-60 | -1.69E-46 |
| MS.gene050950 | MS.gene47437 | -0.827905 | 1.21E-54 | -1.69E-46 |
| MS.gene050986 | MS.gene47437 | -0.824505 | 7.78E-54 | -1.69E-46 |
| MS.gene051044 | MS.gene47437 | 0.821224 | 4.52E-53 | -1.69E-46 |
| MS.gene05104 | MS.gene47437 | 0.859449 | 4.10E-63 | -1.69E-46 |
| MS.gene051127 | MS.gene47437 | 0.818474 | 1.92E-52 | -1.69E-46 |
| MS.gene051138 | MS.gene47437 | 0.853491 | 2.31E-61 | -1.69E-46 |
| MS.gene051268 | MS.gene47437 | -0.810882 | 9.24E-51 | -1.69E-46 |
| MS.gene051317 | MS.gene47437 | -0.850856 | 1.30E-60 | -1.69E-46 |
| MS.gene051439 | MS.gene47437 | 0.813955 | 1.97E-51 | -1.69E-46 |
| MS.gene051440 | MS.gene47437 | 0.813355 | 2.67E-51 | -1.69E-46 |
| MS.gene051517 | MS.gene47437 | 0.805897 | 1.07E-49 | -1.69E-46 |
| MS.gene051632 | MS.gene47437 | 0.816351 | 5.78E-52 | -1.69E-46 |
| MS.gene051651 | MS.gene47437 | 0.861005 | 1.39E-63 | -1.69E-46 |
| MS.gene051666 | MS.gene47437 | -0.806711 | 7.20E-50 | -1.69E-46 |
| MS.gene051838 | MS.gene47437 | -0.830302 | 3.17E-55 | -1.69E-46 |
| MS.gene051874 | MS.gene47437 | -0.829329 | 5.47E-55 | -1.69E-46 |
| MS.gene052129 | MS.gene47437 | 0.822182 | 2.72E-53 | -1.69E-46 |
| MS.gene052164 | MS.gene47437 | -0.851972 | 6.26E-61 | -1.69E-46 |
| MS.gene052211 | MS.gene47437 | 0.819034 | 1.44E-52 | -1.69E-46 |
| MS.gene05240 | MS.gene47437 | 0.839358 | 1.66E-57 | -1.69E-46 |
| MS.gene052482 | MS.gene47437 | -0.820484 | 6.70E-53 | -1.69E-46 |
| MS.gene052486 | MS.gene47437 | -0.837545 | 4.88E-57 | -1.69E-46 |
| MS.gene052494 | MS.gene47437 | 0.835564 | 1.56E-56 | -1.69E-46 |
| MS.gene052503 | MS.gene47437 | -0.82983 | 4.13E-55 | -1.69E-46 |
| MS.gene052506 | MS.gene47437 | -0.817834 | 2.68E-52 | -1.69E-46 |
| MS.gene052606 | MS.gene47437 | 0.848363 | 6.43E-60 | -1.69E-46 |
| MS.gene052615 | MS.gene47437 | -0.814424 | 1.55E-51 | -1.69E-46 |
| MS.gene052702 | MS.gene47437 | 0.821888 | 3.18E-53 | -1.69E-46 |
| MS.gene052805 | MS.gene47437 | 0.832961 | 7.01E-56 | -1.69E-46 |
| MS.gene052822 | MS.gene47437 | -0.811784 | 5.89E-51 | -1.69E-46 |
| MS.gene052823 | MS.gene47437 | -0.828404 | 9.16E-55 | -1.69E-46 |
| MS.gene052825 | MS.gene47437 | -0.831764 | 1.39E-55 | -1.69E-46 |
| MS.gene052872 | MS.gene47437 | -0.804167 | 2.46E-49 | -1.69E-46 |
| MS.gene052966 | MS.gene47437 | -0.828026 | 1.13E-54 | -1.69E-46 |
| MS.gene053033 | MS.gene47437 | 0.825992 | 3.46E-54 | -1.69E-46 |
| MS.gene053203 | MS.gene47437 | -0.843481 | 1.36E-58 | -1.69E-46 |
| MS.gene053213 | MS.gene47437 | -0.801903 | 7.23E-49 | -1.69E-46 |
| MS.gene053284 | MS.gene47437 | -0.804065 | 2.58E-49 | -1.69E-46 |
| MS.gene053420 | MS.gene47437 | 0.845019 | 5.27E-59 | -1.69E-46 |
| MS.gene053421 | MS.gene47437 | 0.804906 | 1.72E-49 | -1.69E-46 |
| MS.gene053436 | MS.gene47437 | -0.805959 | 1.04E-49 | -1.69E-46 |
| MS.gene053479 | MS.gene47437 | -0.843476 | 1.37E-58 | -1.69E-46 |
| MS.gene053574 | MS.gene47437 | -0.804877 | 1.75E-49 | -1.69E-46 |
| MS.gene053579 | MS.gene47437 | -0.819835 | 9.43E-53 | -1.69E-46 |
| MS.gene053632 | MS.gene47437 | -0.83193 | 1.26E-55 | -1.69E-46 |
| MS.gene053824 | MS.gene47437 | -0.841416 | 4.82E-58 | -1.69E-46 |
| MS.gene053916 | MS.gene47437 | -0.826988 | 2.01E-54 | -1.69E-46 |
| MS.gene054146 | MS.gene47437 | 0.812537 | 4.03E-51 | -1.69E-46 |
| MS.gene054290 | MS.gene47437 | 0.816087 | 6.63E-52 | -1.69E-46 |
| MS.gene054344 | MS.gene47437 | -0.812057 | 5.13E-51 | -1.69E-46 |
| MS.gene054408 | MS.gene47437 | -0.813866 | 2.06E-51 | -1.69E-46 |
| MS.gene054595 | MS.gene47437 | -0.8334 | 5.45E-56 | -1.69E-46 |
| MS.gene054642 | MS.gene47437 | -0.827462 | 1.54E-54 | -1.69E-46 |
| MS.gene054706 | MS.gene47437 | 0.853087 | 3.01E-61 | -1.69E-46 |
| MS.gene054707 | MS.gene47437 | 0.807164 | 5.78E-50 | -1.69E-46 |
| MS.gene05470 | MS.gene47437 | -0.857803 | 1.27E-62 | -1.69E-46 |
| MS.gene054742 | MS.gene47437 | 0.806978 | 6.33E-50 | -1.69E-46 |
| MS.gene054884 | MS.gene47437 | 0.831796 | 1.36E-55 | -1.69E-46 |
| MS.gene054954 | MS.gene47437 | -0.831161 | 1.95E-55 | -1.69E-46 |
| MS.gene055124 | MS.gene47437 | 0.806781 | 6.96E-50 | -1.69E-46 |
| MS.gene055154 | MS.gene47437 | 0.826822 | 2.20E-54 | -1.69E-46 |
| MS.gene055158 | MS.gene47437 | 0.842344 | 2.74E-58 | -1.69E-46 |
| MS.gene055159 | MS.gene47437 | 0.805601 | 1.23E-49 | -1.69E-46 |
| MS.gene055206 | MS.gene47437 | -0.818884 | 1.55E-52 | -1.69E-46 |
| MS.gene055362 | MS.gene47437 | -0.835186 | 1.94E-56 | -1.69E-46 |
| MS.gene055502 | MS.gene47437 | -0.877098 | 8.25E-69 | -1.69E-46 |
| MS.gene055577 | MS.gene47437 | -0.873419 | 1.49E-67 | -1.69E-46 |
| MS.gene055616 | MS.gene47437 | 0.822444 | 2.36E-53 | -1.69E-46 |
| MS.gene055748 | MS.gene47437 | -0.877599 | 5.52E-69 | -1.69E-46 |
| MS.gene055750 | MS.gene47437 | -0.871305 | 7.56E-67 | -1.69E-46 |
| MS.gene055751 | MS.gene47437 | -0.87784 | 4.55E-69 | -1.69E-46 |
| MS.gene05589 | MS.gene47437 | -0.87237 | 3.35E-67 | -1.69E-46 |
| MS.gene055941 | MS.gene47437 | -0.837505 | 5.00E-57 | -1.69E-46 |
| MS.gene055977 | MS.gene47437 | 0.813281 | 2.77E-51 | -1.69E-46 |
| MS.gene056224 | MS.gene47437 | 0.824241 | 8.98E-54 | -1.69E-46 |
| MS.gene056283 | MS.gene47437 | -0.809185 | 2.14E-50 | -1.69E-46 |
| MS.gene056387 | MS.gene47437 | -0.812315 | 4.51E-51 | -1.69E-46 |
| MS.gene056446 | MS.gene47437 | -0.804299 | 2.31E-49 | -1.69E-46 |
| MS.gene056504 | MS.gene47437 | -0.85962 | 3.65E-63 | -1.69E-46 |
| MS.gene056510 | MS.gene47437 | -0.844232 | 8.59E-59 | -1.69E-46 |
| MS.gene056549 | MS.gene47437 | -0.804019 | 2.64E-49 | -1.69E-46 |
| MS.gene056590 | MS.gene47437 | 0.830578 | 2.71E-55 | -1.69E-46 |
| MS.gene056591 | MS.gene47437 | 0.832425 | 9.53E-56 | -1.69E-46 |
| MS.gene056657 | MS.gene47437 | -0.834934 | 2.25E-56 | -1.69E-46 |
| MS.gene056678 | MS.gene47437 | 0.830365 | 3.06E-55 | -1.69E-46 |
| MS.gene056688 | MS.gene47437 | 0.825423 | 4.73E-54 | -1.69E-46 |
| MS.gene056692 | MS.gene47437 | -0.842347 | 2.73E-58 | -1.69E-46 |
| MS.gene056694 | MS.gene47437 | 0.860472 | 2.02E-63 | -1.69E-46 |
| MS.gene056697 | MS.gene47437 | 0.842993 | 1.84E-58 | -1.69E-46 |
| MS.gene056748 | MS.gene47437 | 0.815993 | 6.95E-52 | -1.69E-46 |
| MS.gene056856 | MS.gene47437 | 0.86618 | 3.44E-65 | -1.69E-46 |
| MS.gene056857 | MS.gene47437 | 0.809153 | 2.18E-50 | -1.69E-46 |
| MS.gene056920 | MS.gene47437 | 0.803581 | 3.26E-49 | -1.69E-46 |
| MS.gene057086 | MS.gene47437 | -0.827517 | 1.50E-54 | -1.69E-46 |
| MS.gene057261 | MS.gene47437 | 0.820588 | 6.34E-53 | -1.69E-46 |
| MS.gene057293 | MS.gene47437 | 0.805618 | 1.22E-49 | -1.69E-46 |
| MS.gene057544 | MS.gene47437 | 0.812863 | 3.42E-51 | -1.69E-46 |
| MS.gene057658 | MS.gene47437 | -0.812874 | 3.40E-51 | -1.69E-46 |
| MS.gene057717 | MS.gene47437 | 0.839027 | 2.03E-57 | -1.69E-46 |
| MS.gene057768 | MS.gene47437 | 0.858516 | 7.81E-63 | -1.69E-46 |
| MS.gene057831 | MS.gene47437 | -0.838796 | 2.32E-57 | -1.69E-46 |
| MS.gene058067 | MS.gene47437 | 0.80777 | 4.30E-50 | -1.69E-46 |
| MS.gene058068 | MS.gene47437 | 0.842698 | 2.21E-58 | -1.69E-46 |
| MS.gene058093 | MS.gene47437 | 0.814449 | 1.53E-51 | -1.69E-46 |
| MS.gene058099 | MS.gene47437 | 0.823645 | 1.24E-53 | -1.69E-46 |
| MS.gene058111 | MS.gene47437 | 0.804593 | 2.00E-49 | -1.69E-46 |
| MS.gene058117 | MS.gene47437 | 0.814142 | 1.79E-51 | -1.69E-46 |
| MS.gene058157 | MS.gene47437 | -0.809293 | 2.03E-50 | -1.69E-46 |
| MS.gene058158 | MS.gene47437 | 0.810621 | 1.05E-50 | -1.69E-46 |
| MS.gene058171 | MS.gene47437 | 0.834942 | 2.24E-56 | -1.69E-46 |
| MS.gene058173 | MS.gene47437 | 0.822527 | 2.26E-53 | -1.69E-46 |
| MS.gene058175 | MS.gene47437 | 0.83423 | 3.38E-56 | -1.69E-46 |
| MS.gene058334 | MS.gene47437 | 0.860083 | 2.64E-63 | -1.69E-46 |
| MS.gene058338 | MS.gene47437 | -0.806284 | 8.87E-50 | -1.69E-46 |
| MS.gene05837 | MS.gene47437 | -0.866352 | 3.04E-65 | -1.69E-46 |
| MS.gene058382 | MS.gene47437 | 0.825326 | 4.98E-54 | -1.69E-46 |
| MS.gene058418 | MS.gene47437 | 0.809388 | 1.94E-50 | -1.69E-46 |
| MS.gene058419 | MS.gene47437 | -0.848613 | 5.48E-60 | -1.69E-46 |
| MS.gene058452 | MS.gene47437 | 0.806204 | 9.21E-50 | -1.69E-46 |
| MS.gene058544 | MS.gene47437 | -0.857233 | 1.88E-62 | -1.69E-46 |
| MS.gene058603 | MS.gene47437 | 0.874264 | 7.74E-68 | -1.69E-46 |
| MS.gene058773 | MS.gene47437 | -0.81536 | 9.62E-52 | -1.69E-46 |
| MS.gene058838 | MS.gene47437 | -0.847397 | 1.19E-59 | -1.69E-46 |
| MS.gene059022 | MS.gene47437 | -0.835401 | 1.71E-56 | -1.69E-46 |
| MS.gene059023 | MS.gene47437 | -0.859831 | 3.15E-63 | -1.69E-46 |
| MS.gene059045 | MS.gene47437 | 0.826341 | 2.86E-54 | -1.69E-46 |
| MS.gene05914 | MS.gene47437 | -0.837827 | 4.13E-57 | -1.69E-46 |
| MS.gene05926 | MS.gene47437 | 0.835259 | 1.86E-56 | -1.69E-46 |
| MS.gene05934 | MS.gene47437 | -0.800295 | 1.54E-48 | -1.69E-46 |
| MS.gene059367 | MS.gene47437 | -0.817436 | 3.30E-52 | -1.69E-46 |
| MS.gene059526 | MS.gene47437 | 0.821027 | 5.02E-53 | -1.69E-46 |
| MS.gene05960 | MS.gene47437 | 0.831821 | 1.34E-55 | -1.69E-46 |
| MS.gene059667 | MS.gene47437 | -0.81199 | 5.31E-51 | -1.69E-46 |
| MS.gene059677 | MS.gene47437 | -0.835059 | 2.09E-56 | -1.69E-46 |
| MS.gene059699 | MS.gene47437 | 0.825405 | 4.77E-54 | -1.69E-46 |
| MS.gene059703 | MS.gene47437 | 0.838213 | 3.29E-57 | -1.69E-46 |
| MS.gene059718 | MS.gene47437 | -0.831663 | 1.47E-55 | -1.69E-46 |
| MS.gene059756 | MS.gene47437 | -0.811928 | 5.48E-51 | -1.69E-46 |
| MS.gene059801 | MS.gene47437 | -0.810896 | 9.17E-51 | -1.69E-46 |
| MS.gene059865 | MS.gene47437 | -0.856678 | 2.74E-62 | -1.69E-46 |
| MS.gene059953 | MS.gene47437 | 0.832228 | 1.07E-55 | -1.69E-46 |
| MS.gene059955 | MS.gene47437 | 0.843562 | 1.30E-58 | -1.69E-46 |
| MS.gene06000 | MS.gene47437 | -0.848733 | 5.08E-60 | -1.69E-46 |
| MS.gene060087 | MS.gene47437 | 0.832427 | 9.51E-56 | -1.69E-46 |
| MS.gene06027 | MS.gene47437 | -0.805785 | 1.13E-49 | -1.69E-46 |
| MS.gene060405 | MS.gene47437 | 0.843457 | 1.39E-58 | -1.69E-46 |
| MS.gene060593 | MS.gene47437 | 0.844369 | 7.89E-59 | -1.69E-46 |
| MS.gene060595 | MS.gene47437 | 0.812758 | 3.61E-51 | -1.69E-46 |
| MS.gene060703 | MS.gene47437 | -0.810091 | 1.37E-50 | -1.69E-46 |
| MS.gene060762 | MS.gene47437 | -0.868336 | 7.04E-66 | -1.69E-46 |
| MS.gene060778 | MS.gene47437 | -0.836218 | 1.06E-56 | -1.69E-46 |
| MS.gene06077 | MS.gene47437 | -0.856173 | 3.85E-62 | -1.69E-46 |
| MS.gene06080 | MS.gene47437 | 0.806366 | 8.52E-50 | -1.69E-46 |
| MS.gene060823 | MS.gene47437 | 0.83312 | 6.40E-56 | -1.69E-46 |
| MS.gene060835 | MS.gene47437 | -0.802444 | 5.59E-49 | -1.69E-46 |
| MS.gene06084 | MS.gene47437 | 0.812895 | 3.37E-51 | -1.69E-46 |
| MS.gene06092 | MS.gene47437 | -0.816039 | 6.79E-52 | -1.69E-46 |
| MS.gene060982 | MS.gene47437 | -0.872574 | 2.87E-67 | -1.69E-46 |
| MS.gene061044 | MS.gene47437 | 0.866503 | 2.72E-65 | -1.69E-46 |
| MS.gene061150 | MS.gene47437 | -0.828096 | 1.09E-54 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene47437.t1 | MTR_1g062880 | 96.818 | 220 | 7 | 0 | 21 | 240 | 34 | 253 | 1.01e-161 | 449 |
| MS.gene47437.t1 | MTR_1g062860 | 63.063 | 222 | 79 | 3 | 21 | 240 | 33 | 253 | 2.88e-100 | 293 |
| MS.gene47437.t1 | MTR_7g102960 | 60.811 | 222 | 85 | 2 | 18 | 238 | 25 | 245 | 6.77e-97 | 285 |
| MS.gene47437.t1 | MTR_7g090950 | 52.535 | 217 | 96 | 3 | 24 | 239 | 31 | 241 | 9.74e-79 | 238 |
| MS.gene47437.t1 | MTR_0219s0070 | 48.696 | 230 | 110 | 4 | 14 | 240 | 24 | 248 | 2.37e-78 | 237 |
| MS.gene47437.t1 | MTR_1g059940 | 39.419 | 241 | 135 | 4 | 4 | 238 | 6 | 241 | 1.38e-56 | 181 |
| MS.gene47437.t1 | MTR_1g059960 | 42.381 | 210 | 112 | 3 | 35 | 238 | 35 | 241 | 1.59e-53 | 174 |
| MS.gene47437.t1 | MTR_1g059960 | 41.256 | 223 | 120 | 4 | 22 | 238 | 3 | 220 | 1.64e-53 | 173 |
| MS.gene47437.t1 | MTR_1g059900 | 43.452 | 168 | 86 | 3 | 74 | 235 | 8 | 172 | 2.71e-42 | 143 |
| MS.gene47437.t1 | MTR_0219s0130 | 64.286 | 42 | 15 | 0 | 199 | 240 | 3 | 44 | 9.93e-14 | 64.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene47437.t1 | AT2G28210 | 54.393 | 239 | 103 | 4 | 4 | 240 | 17 | 251 | 8.20e-93 | 274 |
| MS.gene47437.t1 | AT1G08080 | 53.394 | 221 | 98 | 2 | 21 | 240 | 35 | 251 | 1.32e-87 | 261 |
| MS.gene47437.t1 | AT4G20990 | 52.273 | 220 | 98 | 3 | 21 | 240 | 31 | 243 | 9.41e-80 | 241 |
| MS.gene47437.t1 | AT1G08065 | 50.224 | 223 | 104 | 5 | 21 | 240 | 30 | 248 | 1.55e-73 | 225 |
| MS.gene47437.t1 | AT4G21000 | 49.495 | 198 | 93 | 3 | 26 | 223 | 37 | 227 | 1.48e-69 | 214 |
| MS.gene47437.t1 | AT5G04180 | 45.205 | 219 | 114 | 3 | 21 | 237 | 21 | 235 | 4.42e-60 | 191 |
| MS.gene47437.t1 | AT2G28210 | 52.174 | 138 | 61 | 2 | 4 | 136 | 17 | 154 | 1.93e-46 | 152 |
| MS.gene47437.t1 | AT5G56330 | 44.068 | 177 | 92 | 3 | 21 | 194 | 135 | 307 | 7.81e-46 | 155 |
| MS.gene47437.t1 | AT3G52720 | 37.736 | 212 | 122 | 2 | 33 | 238 | 36 | 243 | 4.89e-45 | 152 |
| MS.gene47437.t1 | AT3G52720 | 37.736 | 212 | 122 | 2 | 33 | 238 | 36 | 243 | 4.89e-45 | 152 |
| MS.gene47437.t1 | AT3G52720 | 37.736 | 212 | 122 | 2 | 33 | 238 | 36 | 243 | 4.89e-45 | 152 |
| MS.gene47437.t1 | AT5G56330 | 38.565 | 223 | 93 | 3 | 21 | 241 | 135 | 315 | 6.92e-44 | 151 |
| MS.gene47437.t1 | AT3G52720 | 36.548 | 197 | 115 | 2 | 33 | 223 | 36 | 228 | 1.07e-39 | 137 |
Find 61 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTGGTCTAATGTATAAAAT+TGG | 0.268694 | 1.4:-51755445 | MS.gene47437:CDS |
| CATTTGGACTATTAATAAAA+AGG | 0.275213 | 1.4:-51755154 | MS.gene47437:intron |
| CTTGCACTGAAGGTGTCATT+TGG | 0.314096 | 1.4:-51755170 | MS.gene47437:CDS |
| TTGGCACCACCCTCACTCTA+TGG | 0.322735 | 1.4:+51759885 | None:intergenic |
| TACACAAAAGATAGCAAAAT+AGG | 0.329314 | 1.4:-51759989 | MS.gene47437:CDS |
| CTTTACCATAGCATGTAGTT+TGG | 0.330417 | 1.4:+51760895 | None:intergenic |
| CTATGGTTTGACATATCAAT+TGG | 0.372835 | 1.4:+51759902 | None:intergenic |
| AAGAGTAAGATAGCTGTTAT+TGG | 0.374604 | 1.4:-51755463 | MS.gene47437:CDS |
| AATAAATGATGCAGGTGAAA+TGG | 0.381383 | 1.4:-51756876 | MS.gene47437:intron |
| CAAAATAGGCCCTTCACATT+GGG | 0.381389 | 1.4:-51759975 | MS.gene47437:CDS |
| GACAAACCTCCTGCCATTGA+TGG | 0.396424 | 1.4:+51756771 | None:intergenic |
| AAGATCGAAGGGAGCATGTC+TGG | 0.402976 | 1.4:-51760928 | MS.gene47437:CDS |
| GTGAGGGTGGTGCCAAAGTT+AGG | 0.408994 | 1.4:-51759878 | MS.gene47437:CDS |
| ATGAAGTTGAAAGGAGCATT+GGG | 0.412118 | 1.4:-51755266 | MS.gene47437:CDS |
| CAGTGCAAGGAGGGACAGTA+AGG | 0.415316 | 1.4:+51755184 | None:intergenic |
| CATGAAAGTGCAAAAGTAAA+CGG | 0.418487 | 1.4:-51755487 | MS.gene47437:CDS |
| CCACCCAACTTGATTTCTGA+AGG | 0.465681 | 1.4:+51755234 | None:intergenic |
| GATCCTTCAGAAATCAAGTT+GGG | 0.471464 | 1.4:-51755237 | MS.gene47437:CDS |
| ACTGTCCCTCCTTGCACTGA+AGG | 0.477863 | 1.4:-51755180 | MS.gene47437:CDS |
| CCTTCTGAACACACCATCAA+TGG | 0.486540 | 1.4:-51756784 | MS.gene47437:CDS |
| ATGAAAGTGCAAAAGTAAAC+GGG | 0.490283 | 1.4:-51755486 | MS.gene47437:CDS |
| GAATGGGCAACATGTAATGA+TGG | 0.492565 | 1.4:-51759938 | MS.gene47437:CDS |
| AAGTGTTTCAAGAGGGCAGT+TGG | 0.498514 | 1.4:-51754866 | MS.gene47437:CDS |
| GCAAAATAGGCCCTTCACAT+TGG | 0.500213 | 1.4:-51759976 | MS.gene47437:CDS |
| AATGAAGTTGAAAGGAGCAT+TGG | 0.505433 | 1.4:-51755267 | MS.gene47437:CDS |
| GGGGTAAAATCAAGAAGGAA+TGG | 0.508013 | 1.4:-51759955 | MS.gene47437:CDS |
| ATAATAATATTTAAGATCGA+AGG | 0.518174 | 1.4:-51760940 | MS.gene47437:intron |
| CCATAGCATGTAGTTTGGAA+AGG | 0.523161 | 1.4:+51760900 | None:intergenic |
| GGGTAAAATCAAGAAGGAAT+GGG | 0.525371 | 1.4:-51759954 | MS.gene47437:CDS |
| GCTGGATCAATAAATATCAA+TGG | 0.525902 | 1.4:-51756844 | MS.gene47437:CDS |
| AAATAGAGGTCATGATATTG+AGG | 0.527354 | 1.4:-51759813 | MS.gene47437:intron |
| CCTTTCCAAACTACATGCTA+TGG | 0.534606 | 1.4:-51760900 | MS.gene47437:intron |
| CCATTGATGGTGTGTTCAGA+AGG | 0.543813 | 1.4:+51756784 | None:intergenic |
| AAGAAGTACTACAGATACAT+AGG | 0.545677 | 1.4:-51755210 | MS.gene47437:CDS |
| GTGAAATGGAAGGAAGATGC+TGG | 0.545944 | 1.4:-51756862 | MS.gene47437:CDS |
| ACCTTGCTGAGAACACGATC+TGG | 0.547703 | 1.4:+51755418 | None:intergenic |
| TGATCCTTCAGAAATCAAGT+TGG | 0.568562 | 1.4:-51755238 | MS.gene47437:CDS |
| CAAAGTTAGGAAAATTAAAG+AGG | 0.570259 | 1.4:-51759865 | MS.gene47437:CDS |
| AATGGGCAACATGTAATGAT+GGG | 0.583902 | 1.4:-51759937 | MS.gene47437:CDS |
| TAATAATATTTAAGATCGAA+GGG | 0.584166 | 1.4:-51760939 | MS.gene47437:intron |
| CTGAACACACCATCAATGGC+AGG | 0.589619 | 1.4:-51756780 | MS.gene47437:CDS |
| CAAATGACACCTTCAGTGCA+AGG | 0.595109 | 1.4:+51755171 | None:intergenic |
| AATGATGCAGGTGAAATGGA+AGG | 0.596654 | 1.4:-51756872 | MS.gene47437:intron |
| CATGGACCATGTGTAGCTCA+AGG | 0.603832 | 1.4:+51755506 | None:intergenic |
| ACCAGATCGTGTTCTCAGCA+AGG | 0.606154 | 1.4:-51755419 | MS.gene47437:intron |
| TTCAACTTCATTATCCACCA+TGG | 0.609479 | 1.4:+51755278 | None:intergenic |
| TGACACCTTCAGTGCAAGGA+GGG | 0.610217 | 1.4:+51755175 | None:intergenic |
| TGGTGGATAATGAAGTTGAA+AGG | 0.612709 | 1.4:-51755275 | MS.gene47437:CDS |
| AGTGCAAGGAGGGACAGTAA+GGG | 0.619780 | 1.4:+51755185 | None:intergenic |
| AAAATAGGCCCTTCACATTG+GGG | 0.624162 | 1.4:-51759974 | MS.gene47437:CDS |
| CAGATAAGAAGTGTTTCAAG+AGG | 0.624399 | 1.4:-51754874 | MS.gene47437:CDS |
| GTCAAACCATAGAGTGAGGG+TGG | 0.624857 | 1.4:-51759891 | MS.gene47437:CDS |
| ATATGTCAAACCATAGAGTG+AGG | 0.627999 | 1.4:-51759895 | MS.gene47437:CDS |
| ACATTGGGGTAAAATCAAGA+AGG | 0.636121 | 1.4:-51759960 | MS.gene47437:CDS |
| TGAAGTTGAAAGGAGCATTG+GGG | 0.638978 | 1.4:-51755265 | MS.gene47437:CDS |
| AGATAAGAAGTGTTTCAAGA+GGG | 0.642367 | 1.4:-51754873 | MS.gene47437:CDS |
| CCTTCAGAAATCAAGTTGGG+TGG | 0.652820 | 1.4:-51755234 | MS.gene47437:CDS |
| TATGTCAAACCATAGAGTGA+GGG | 0.662085 | 1.4:-51759894 | MS.gene47437:CDS |
| AACACACCATCAATGGCAGG+AGG | 0.695820 | 1.4:-51756777 | MS.gene47437:intron |
| ATGACACCTTCAGTGCAAGG+AGG | 0.714310 | 1.4:+51755174 | None:intergenic |
| GTATGACCTTGAGCTACACA+TGG | 0.714569 | 1.4:-51755512 | MS.gene47437:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 51753184 | 51761191 | 51753184 | ID=MS.gene47437 |
| chr1.4 | mRNA | 51753184 | 51761191 | 51753184 | ID=MS.gene47437.t1;Parent=MS.gene47437 |
| chr1.4 | exon | 51761178 | 51761191 | 51761178 | ID=MS.gene47437.t1.exon1;Parent=MS.gene47437.t1 |
| chr1.4 | CDS | 51761178 | 51761191 | 51761178 | ID=cds.MS.gene47437.t1;Parent=MS.gene47437.t1 |
| chr1.4 | exon | 51760901 | 51760947 | 51760901 | ID=MS.gene47437.t1.exon2;Parent=MS.gene47437.t1 |
| chr1.4 | CDS | 51760901 | 51760947 | 51760901 | ID=cds.MS.gene47437.t1;Parent=MS.gene47437.t1 |
| chr1.4 | exon | 51759814 | 51760031 | 51759814 | ID=MS.gene47437.t1.exon3;Parent=MS.gene47437.t1 |
| chr1.4 | CDS | 51759814 | 51760031 | 51759814 | ID=cds.MS.gene47437.t1;Parent=MS.gene47437.t1 |
| chr1.4 | exon | 51756778 | 51756884 | 51756778 | ID=MS.gene47437.t1.exon4;Parent=MS.gene47437.t1 |
| chr1.4 | CDS | 51756778 | 51756884 | 51756778 | ID=cds.MS.gene47437.t1;Parent=MS.gene47437.t1 |
| chr1.4 | exon | 51755420 | 51755534 | 51755420 | ID=MS.gene47437.t1.exon5;Parent=MS.gene47437.t1 |
| chr1.4 | CDS | 51755420 | 51755534 | 51755420 | ID=cds.MS.gene47437.t1;Parent=MS.gene47437.t1 |
| chr1.4 | exon | 51755155 | 51755319 | 51755155 | ID=MS.gene47437.t1.exon6;Parent=MS.gene47437.t1 |
| chr1.4 | CDS | 51755155 | 51755319 | 51755155 | ID=cds.MS.gene47437.t1;Parent=MS.gene47437.t1 |
| chr1.4 | exon | 51754840 | 51754893 | 51754840 | ID=MS.gene47437.t1.exon7;Parent=MS.gene47437.t1 |
| chr1.4 | CDS | 51754840 | 51754893 | 51754840 | ID=cds.MS.gene47437.t1;Parent=MS.gene47437.t1 |
| chr1.4 | exon | 51753184 | 51753195 | 51753184 | ID=MS.gene47437.t1.exon8;Parent=MS.gene47437.t1 |
| chr1.4 | CDS | 51753184 | 51753195 | 51753184 | ID=cds.MS.gene47437.t1;Parent=MS.gene47437.t1 |
| Gene Sequence |
| Protein sequence |
