Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene27790.t1 | XP_013465937.1 | 95.3 | 295 | 13 | 1 | 1 | 294 | 47 | 341 | 1.10E-136 | 496.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene27790.t1 | Q9M2Y9 | 94.2 | 69 | 4 | 0 | 1 | 69 | 47 | 115 | 6.1e-35 | 149.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene27790.t1 | A0A072VEW3 | 95.3 | 295 | 13 | 1 | 1 | 294 | 47 | 341 | 8.0e-137 | 496.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049171 | MS.gene27790 | -0.876962 | 9.20E-69 | -1.69E-46 |
| MS.gene049217 | MS.gene27790 | -0.814928 | 1.20E-51 | -1.69E-46 |
| MS.gene049222 | MS.gene27790 | -0.864261 | 1.38E-64 | -1.69E-46 |
| MS.gene049232 | MS.gene27790 | -0.825403 | 4.78E-54 | -1.69E-46 |
| MS.gene049285 | MS.gene27790 | -0.848599 | 5.53E-60 | -1.69E-46 |
| MS.gene049320 | MS.gene27790 | -0.847205 | 1.34E-59 | -1.69E-46 |
| MS.gene04932 | MS.gene27790 | 0.818804 | 1.62E-52 | -1.69E-46 |
| MS.gene049609 | MS.gene27790 | -0.828225 | 1.01E-54 | -1.69E-46 |
| MS.gene049611 | MS.gene27790 | 0.818842 | 1.59E-52 | -1.69E-46 |
| MS.gene049633 | MS.gene27790 | -0.86999 | 2.05E-66 | -1.69E-46 |
| MS.gene049634 | MS.gene27790 | 0.810062 | 1.39E-50 | -1.69E-46 |
| MS.gene049805 | MS.gene27790 | -0.814306 | 1.65E-51 | -1.69E-46 |
| MS.gene050082 | MS.gene27790 | 0.811308 | 7.47E-51 | -1.69E-46 |
| MS.gene05010 | MS.gene27790 | -0.830183 | 3.39E-55 | -1.69E-46 |
| MS.gene050163 | MS.gene27790 | -0.816278 | 6.00E-52 | -1.69E-46 |
| MS.gene050165 | MS.gene27790 | -0.818651 | 1.75E-52 | -1.69E-46 |
| MS.gene050170 | MS.gene27790 | -0.886053 | 4.78E-72 | -1.69E-46 |
| MS.gene050323 | MS.gene27790 | -0.890252 | 1.17E-73 | -1.69E-46 |
| MS.gene050333 | MS.gene27790 | -0.818288 | 2.12E-52 | -1.69E-46 |
| MS.gene050338 | MS.gene27790 | 0.830555 | 2.75E-55 | -1.69E-46 |
| MS.gene050381 | MS.gene27790 | 0.829563 | 4.80E-55 | -1.69E-46 |
| MS.gene050444 | MS.gene27790 | -0.851729 | 7.34E-61 | -1.69E-46 |
| MS.gene050496 | MS.gene27790 | -0.872431 | 3.20E-67 | -1.69E-46 |
| MS.gene050504 | MS.gene27790 | -0.868206 | 7.76E-66 | -1.69E-46 |
| MS.gene050518 | MS.gene27790 | -0.830593 | 2.69E-55 | -1.69E-46 |
| MS.gene050577 | MS.gene27790 | -0.855958 | 4.45E-62 | -1.69E-46 |
| MS.gene050612 | MS.gene27790 | -0.879552 | 1.14E-69 | -1.69E-46 |
| MS.gene050675 | MS.gene27790 | -0.871382 | 7.13E-67 | -1.69E-46 |
| MS.gene050697 | MS.gene27790 | -0.824545 | 7.62E-54 | -1.69E-46 |
| MS.gene050699 | MS.gene27790 | -0.847779 | 9.32E-60 | -1.69E-46 |
| MS.gene050747 | MS.gene27790 | -0.830261 | 3.24E-55 | -1.69E-46 |
| MS.gene050772 | MS.gene27790 | -0.832664 | 8.31E-56 | -1.69E-46 |
| MS.gene05079 | MS.gene27790 | 0.805194 | 1.50E-49 | -1.69E-46 |
| MS.gene050809 | MS.gene27790 | 0.829087 | 6.26E-55 | -1.69E-46 |
| MS.gene05080 | MS.gene27790 | -0.874099 | 8.80E-68 | -1.69E-46 |
| MS.gene05081 | MS.gene27790 | -0.829682 | 4.49E-55 | -1.69E-46 |
| MS.gene050868 | MS.gene27790 | -0.889732 | 1.86E-73 | -1.69E-46 |
| MS.gene050871 | MS.gene27790 | -0.885076 | 1.11E-71 | -1.69E-46 |
| MS.gene050904 | MS.gene27790 | -0.841128 | 5.73E-58 | -1.69E-46 |
| MS.gene050950 | MS.gene27790 | -0.825771 | 3.91E-54 | -1.69E-46 |
| MS.gene050986 | MS.gene27790 | -0.843252 | 1.57E-58 | -1.69E-46 |
| MS.gene051044 | MS.gene27790 | 0.827799 | 1.28E-54 | -1.69E-46 |
| MS.gene05104 | MS.gene27790 | 0.832093 | 1.15E-55 | -1.69E-46 |
| MS.gene051127 | MS.gene27790 | 0.825609 | 4.27E-54 | -1.69E-46 |
| MS.gene051138 | MS.gene27790 | 0.879534 | 1.15E-69 | -1.69E-46 |
| MS.gene051268 | MS.gene27790 | -0.857375 | 1.70E-62 | -1.69E-46 |
| MS.gene051317 | MS.gene27790 | -0.859115 | 5.17E-63 | -1.69E-46 |
| MS.gene051364 | MS.gene27790 | 0.812805 | 3.52E-51 | -1.69E-46 |
| MS.gene051366 | MS.gene27790 | 0.815093 | 1.10E-51 | -1.69E-46 |
| MS.gene051439 | MS.gene27790 | 0.820288 | 7.43E-53 | -1.69E-46 |
| MS.gene051440 | MS.gene27790 | 0.803842 | 2.87E-49 | -1.69E-46 |
| MS.gene051517 | MS.gene27790 | 0.802657 | 5.06E-49 | -1.69E-46 |
| MS.gene051552 | MS.gene27790 | 0.801718 | 7.89E-49 | -1.69E-46 |
| MS.gene051651 | MS.gene27790 | 0.888372 | 6.26E-73 | -1.69E-46 |
| MS.gene051749 | MS.gene27790 | 0.816294 | 5.96E-52 | -1.69E-46 |
| MS.gene051810 | MS.gene27790 | -0.813339 | 2.69E-51 | -1.69E-46 |
| MS.gene051838 | MS.gene27790 | -0.865125 | 7.41E-65 | -1.69E-46 |
| MS.gene051874 | MS.gene27790 | -0.837466 | 5.11E-57 | -1.69E-46 |
| MS.gene051941 | MS.gene27790 | -0.80463 | 1.97E-49 | -1.69E-46 |
| MS.gene051973 | MS.gene27790 | 0.802583 | 5.24E-49 | -1.69E-46 |
| MS.gene052129 | MS.gene27790 | 0.85073 | 1.41E-60 | -1.69E-46 |
| MS.gene052164 | MS.gene27790 | -0.857018 | 2.17E-62 | -1.69E-46 |
| MS.gene052211 | MS.gene27790 | 0.814417 | 1.56E-51 | -1.69E-46 |
| MS.gene05240 | MS.gene27790 | 0.816594 | 5.10E-52 | -1.69E-46 |
| MS.gene052482 | MS.gene27790 | -0.831712 | 1.43E-55 | -1.69E-46 |
| MS.gene052486 | MS.gene27790 | -0.833109 | 6.44E-56 | -1.69E-46 |
| MS.gene052494 | MS.gene27790 | 0.810945 | 8.95E-51 | -1.69E-46 |
| MS.gene052503 | MS.gene27790 | -0.841822 | 3.76E-58 | -1.69E-46 |
| MS.gene052506 | MS.gene27790 | -0.821832 | 3.27E-53 | -1.69E-46 |
| MS.gene052606 | MS.gene27790 | 0.838807 | 2.31E-57 | -1.69E-46 |
| MS.gene052615 | MS.gene27790 | -0.823764 | 1.16E-53 | -1.69E-46 |
| MS.gene052822 | MS.gene27790 | -0.824364 | 8.40E-54 | -1.69E-46 |
| MS.gene052823 | MS.gene27790 | -0.846416 | 2.20E-59 | -1.69E-46 |
| MS.gene052825 | MS.gene27790 | -0.847715 | 9.70E-60 | -1.69E-46 |
| MS.gene052870 | MS.gene27790 | -0.818729 | 1.68E-52 | -1.69E-46 |
| MS.gene052872 | MS.gene27790 | -0.835319 | 1.80E-56 | -1.69E-46 |
| MS.gene052916 | MS.gene27790 | -0.802839 | 4.64E-49 | -1.69E-46 |
| MS.gene052966 | MS.gene27790 | -0.875029 | 4.25E-68 | -1.69E-46 |
| MS.gene053097 | MS.gene27790 | 0.821581 | 3.74E-53 | -1.69E-46 |
| MS.gene053203 | MS.gene27790 | -0.877151 | 7.91E-69 | -1.69E-46 |
| MS.gene053213 | MS.gene27790 | -0.810342 | 1.21E-50 | -1.69E-46 |
| MS.gene053286 | MS.gene27790 | -0.810892 | 9.19E-51 | -1.69E-46 |
| MS.gene053420 | MS.gene27790 | 0.844759 | 6.20E-59 | -1.69E-46 |
| MS.gene053421 | MS.gene27790 | 0.809236 | 2.09E-50 | -1.69E-46 |
| MS.gene053436 | MS.gene27790 | -0.810088 | 1.37E-50 | -1.69E-46 |
| MS.gene053479 | MS.gene27790 | -0.856479 | 3.13E-62 | -1.69E-46 |
| MS.gene053480 | MS.gene27790 | -0.831287 | 1.82E-55 | -1.69E-46 |
| MS.gene053574 | MS.gene27790 | -0.822936 | 1.81E-53 | -1.69E-46 |
| MS.gene053626 | MS.gene27790 | -0.807654 | 4.55E-50 | -1.69E-46 |
| MS.gene053632 | MS.gene27790 | -0.831269 | 1.84E-55 | -1.69E-46 |
| MS.gene053776 | MS.gene27790 | 0.811854 | 5.69E-51 | -1.69E-46 |
| MS.gene053824 | MS.gene27790 | -0.86865 | 5.58E-66 | -1.69E-46 |
| MS.gene053887 | MS.gene27790 | 0.823124 | 1.64E-53 | -1.69E-46 |
| MS.gene053916 | MS.gene27790 | -0.846288 | 2.39E-59 | -1.69E-46 |
| MS.gene054344 | MS.gene27790 | -0.823654 | 1.23E-53 | -1.69E-46 |
| MS.gene054408 | MS.gene27790 | -0.802852 | 4.61E-49 | -1.69E-46 |
| MS.gene054595 | MS.gene27790 | -0.842545 | 2.42E-58 | -1.69E-46 |
| MS.gene054600 | MS.gene27790 | -0.818582 | 1.82E-52 | -1.69E-46 |
| MS.gene054642 | MS.gene27790 | -0.833885 | 4.12E-56 | -1.69E-46 |
| MS.gene054706 | MS.gene27790 | 0.87054 | 1.35E-66 | -1.69E-46 |
| MS.gene054707 | MS.gene27790 | 0.827832 | 1.26E-54 | -1.69E-46 |
| MS.gene05470 | MS.gene27790 | -0.864305 | 1.34E-64 | -1.69E-46 |
| MS.gene054742 | MS.gene27790 | 0.81358 | 2.38E-51 | -1.69E-46 |
| MS.gene054884 | MS.gene27790 | 0.81553 | 8.82E-52 | -1.69E-46 |
| MS.gene05494 | MS.gene27790 | -0.845779 | 3.28E-59 | -1.69E-46 |
| MS.gene054954 | MS.gene27790 | -0.856906 | 2.34E-62 | -1.69E-46 |
| MS.gene055154 | MS.gene27790 | 0.810691 | 1.02E-50 | -1.69E-46 |
| MS.gene055158 | MS.gene27790 | 0.834366 | 3.12E-56 | -1.69E-46 |
| MS.gene055202 | MS.gene27790 | 0.80552 | 1.28E-49 | -1.69E-46 |
| MS.gene055206 | MS.gene27790 | -0.833901 | 4.09E-56 | -1.69E-46 |
| MS.gene055224 | MS.gene27790 | -0.81119 | 7.93E-51 | -1.69E-46 |
| MS.gene055289 | MS.gene27790 | -0.800269 | 1.56E-48 | -1.69E-46 |
| MS.gene055362 | MS.gene27790 | -0.854679 | 1.05E-61 | -1.69E-46 |
| MS.gene055502 | MS.gene27790 | -0.882976 | 6.63E-71 | -1.69E-46 |
| MS.gene055577 | MS.gene27790 | -0.884098 | 2.56E-71 | -1.69E-46 |
| MS.gene055616 | MS.gene27790 | 0.802367 | 5.80E-49 | -1.69E-46 |
| MS.gene055748 | MS.gene27790 | -0.874542 | 6.23E-68 | -1.69E-46 |
| MS.gene055750 | MS.gene27790 | -0.859531 | 3.88E-63 | -1.69E-46 |
| MS.gene055751 | MS.gene27790 | -0.875542 | 2.84E-68 | -1.69E-46 |
| MS.gene055776 | MS.gene27790 | -0.829997 | 3.76E-55 | -1.69E-46 |
| MS.gene05589 | MS.gene27790 | -0.899067 | 2.86E-77 | -1.69E-46 |
| MS.gene055941 | MS.gene27790 | -0.837963 | 3.81E-57 | -1.69E-46 |
| MS.gene055942 | MS.gene27790 | 0.820744 | 5.84E-53 | -1.69E-46 |
| MS.gene056198 | MS.gene27790 | 0.838056 | 3.61E-57 | -1.69E-46 |
| MS.gene056224 | MS.gene27790 | 0.835551 | 1.57E-56 | -1.69E-46 |
| MS.gene056359 | MS.gene27790 | 0.800972 | 1.12E-48 | -1.69E-46 |
| MS.gene056387 | MS.gene27790 | -0.878745 | 2.19E-69 | -1.69E-46 |
| MS.gene056487 | MS.gene27790 | -0.811034 | 8.57E-51 | -1.69E-46 |
| MS.gene056504 | MS.gene27790 | -0.898554 | 4.74E-77 | -1.69E-46 |
| MS.gene056510 | MS.gene27790 | -0.864767 | 9.60E-65 | -1.69E-46 |
| MS.gene056590 | MS.gene27790 | 0.813919 | 2.01E-51 | -1.69E-46 |
| MS.gene056591 | MS.gene27790 | 0.813354 | 2.67E-51 | -1.69E-46 |
| MS.gene056618 | MS.gene27790 | 0.807623 | 4.62E-50 | -1.69E-46 |
| MS.gene056657 | MS.gene27790 | -0.844052 | 9.60E-59 | -1.69E-46 |
| MS.gene056678 | MS.gene27790 | 0.817621 | 3.00E-52 | -1.69E-46 |
| MS.gene056688 | MS.gene27790 | 0.82339 | 1.42E-53 | -1.69E-46 |
| MS.gene056692 | MS.gene27790 | -0.838533 | 2.72E-57 | -1.69E-46 |
| MS.gene056694 | MS.gene27790 | 0.842858 | 2.00E-58 | -1.69E-46 |
| MS.gene056697 | MS.gene27790 | 0.819497 | 1.13E-52 | -1.69E-46 |
| MS.gene056748 | MS.gene27790 | 0.830072 | 3.61E-55 | -1.69E-46 |
| MS.gene056856 | MS.gene27790 | 0.853301 | 2.62E-61 | -1.69E-46 |
| MS.gene056857 | MS.gene27790 | 0.817557 | 3.10E-52 | -1.69E-46 |
| MS.gene057014 | MS.gene27790 | 0.812828 | 3.48E-51 | -1.69E-46 |
| MS.gene057076 | MS.gene27790 | -0.813347 | 2.68E-51 | -1.69E-46 |
| MS.gene057086 | MS.gene27790 | -0.833928 | 4.02E-56 | -1.69E-46 |
| MS.gene05753 | MS.gene27790 | -0.804293 | 2.32E-49 | -1.69E-46 |
| MS.gene057544 | MS.gene27790 | 0.819444 | 1.16E-52 | -1.69E-46 |
| MS.gene057549 | MS.gene27790 | 0.800885 | 1.17E-48 | -1.69E-46 |
| MS.gene057658 | MS.gene27790 | -0.838717 | 2.44E-57 | -1.69E-46 |
| MS.gene057717 | MS.gene27790 | 0.812657 | 3.80E-51 | -1.69E-46 |
| MS.gene057734 | MS.gene27790 | -0.805016 | 1.64E-49 | -1.69E-46 |
| MS.gene057768 | MS.gene27790 | 0.842374 | 2.69E-58 | -1.69E-46 |
| MS.gene057831 | MS.gene27790 | -0.825529 | 4.46E-54 | -1.69E-46 |
| MS.gene057857 | MS.gene27790 | -0.821398 | 4.12E-53 | -1.69E-46 |
| MS.gene05787 | MS.gene27790 | -0.809233 | 2.09E-50 | -1.69E-46 |
| MS.gene058067 | MS.gene27790 | 0.805961 | 1.04E-49 | -1.69E-46 |
| MS.gene058068 | MS.gene27790 | 0.812462 | 4.19E-51 | -1.69E-46 |
| MS.gene058093 | MS.gene27790 | 0.803775 | 2.97E-49 | -1.69E-46 |
| MS.gene058099 | MS.gene27790 | 0.825161 | 5.45E-54 | -1.69E-46 |
| MS.gene058109 | MS.gene27790 | 0.800682 | 1.28E-48 | -1.69E-46 |
| MS.gene058117 | MS.gene27790 | 0.802726 | 4.89E-49 | -1.69E-46 |
| MS.gene058157 | MS.gene27790 | -0.831337 | 1.77E-55 | -1.69E-46 |
| MS.gene058171 | MS.gene27790 | 0.835871 | 1.30E-56 | -1.69E-46 |
| MS.gene058173 | MS.gene27790 | 0.829547 | 4.84E-55 | -1.69E-46 |
| MS.gene058175 | MS.gene27790 | 0.843084 | 1.74E-58 | -1.69E-46 |
| MS.gene058268 | MS.gene27790 | 0.81475 | 1.31E-51 | -1.69E-46 |
| MS.gene058269 | MS.gene27790 | 0.805485 | 1.31E-49 | -1.69E-46 |
| MS.gene058334 | MS.gene27790 | 0.865068 | 7.72E-65 | -1.69E-46 |
| MS.gene058338 | MS.gene27790 | -0.831174 | 1.94E-55 | -1.69E-46 |
| MS.gene05837 | MS.gene27790 | -0.860246 | 2.36E-63 | -1.69E-46 |
| MS.gene058382 | MS.gene27790 | 0.842225 | 2.94E-58 | -1.69E-46 |
| MS.gene058418 | MS.gene27790 | 0.836432 | 9.39E-57 | -1.69E-46 |
| MS.gene058419 | MS.gene27790 | -0.848091 | 7.64E-60 | -1.69E-46 |
| MS.gene058452 | MS.gene27790 | 0.81652 | 5.30E-52 | -1.69E-46 |
| MS.gene058544 | MS.gene27790 | -0.846198 | 2.52E-59 | -1.69E-46 |
| MS.gene058603 | MS.gene27790 | 0.849467 | 3.17E-60 | -1.69E-46 |
| MS.gene058723 | MS.gene27790 | -0.800951 | 1.13E-48 | -1.69E-46 |
| MS.gene058773 | MS.gene27790 | -0.844783 | 6.10E-59 | -1.69E-46 |
| MS.gene058838 | MS.gene27790 | -0.885539 | 7.45E-72 | -1.69E-46 |
| MS.gene059022 | MS.gene27790 | -0.862467 | 4.96E-64 | -1.69E-46 |
| MS.gene059023 | MS.gene27790 | -0.867744 | 1.09E-65 | -1.69E-46 |
| MS.gene059045 | MS.gene27790 | 0.818306 | 2.10E-52 | -1.69E-46 |
| MS.gene05913 | MS.gene27790 | -0.834404 | 3.06E-56 | -1.69E-46 |
| MS.gene05914 | MS.gene27790 | -0.841832 | 3.74E-58 | -1.69E-46 |
| MS.gene05926 | MS.gene27790 | 0.84859 | 5.56E-60 | -1.69E-46 |
| MS.gene059315 | MS.gene27790 | 0.810973 | 8.83E-51 | -1.69E-46 |
| MS.gene059367 | MS.gene27790 | -0.816697 | 4.84E-52 | -1.69E-46 |
| MS.gene059526 | MS.gene27790 | 0.811387 | 7.18E-51 | -1.69E-46 |
| MS.gene05960 | MS.gene27790 | 0.822991 | 1.76E-53 | -1.69E-46 |
| MS.gene059667 | MS.gene27790 | -0.848741 | 5.05E-60 | -1.69E-46 |
| MS.gene059677 | MS.gene27790 | -0.856519 | 3.05E-62 | -1.69E-46 |
| MS.gene059699 | MS.gene27790 | 0.836506 | 8.99E-57 | -1.69E-46 |
| MS.gene059701 | MS.gene27790 | 0.805102 | 1.57E-49 | -1.69E-46 |
| MS.gene059703 | MS.gene27790 | 0.847412 | 1.18E-59 | -1.69E-46 |
| MS.gene059718 | MS.gene27790 | -0.8554 | 6.47E-62 | -1.69E-46 |
| MS.gene059756 | MS.gene27790 | -0.815552 | 8.72E-52 | -1.69E-46 |
| MS.gene059801 | MS.gene27790 | -0.801931 | 7.13E-49 | -1.69E-46 |
| MS.gene059865 | MS.gene27790 | -0.882433 | 1.05E-70 | -1.69E-46 |
| MS.gene059955 | MS.gene27790 | 0.803488 | 3.40E-49 | -1.69E-46 |
| MS.gene06000 | MS.gene27790 | -0.873258 | 1.69E-67 | -1.69E-46 |
| MS.gene06027 | MS.gene27790 | -0.859187 | 4.92E-63 | -1.69E-46 |
| MS.gene060405 | MS.gene27790 | 0.839166 | 1.86E-57 | -1.69E-46 |
| MS.gene060482 | MS.gene27790 | -0.800507 | 1.40E-48 | -1.69E-46 |
| MS.gene060593 | MS.gene27790 | 0.826296 | 2.93E-54 | -1.69E-46 |
| MS.gene060595 | MS.gene27790 | 0.83897 | 2.10E-57 | -1.69E-46 |
| MS.gene060703 | MS.gene27790 | -0.81342 | 2.58E-51 | -1.69E-46 |
| MS.gene060762 | MS.gene27790 | -0.883937 | 2.94E-71 | -1.69E-46 |
| MS.gene060778 | MS.gene27790 | -0.865333 | 6.37E-65 | -1.69E-46 |
| MS.gene06077 | MS.gene27790 | -0.861589 | 9.23E-64 | -1.69E-46 |
| MS.gene060823 | MS.gene27790 | 0.828202 | 1.03E-54 | -1.69E-46 |
| MS.gene060835 | MS.gene27790 | -0.81363 | 2.32E-51 | -1.69E-46 |
| MS.gene06084 | MS.gene27790 | 0.800831 | 1.20E-48 | -1.69E-46 |
| MS.gene06092 | MS.gene27790 | -0.814106 | 1.82E-51 | -1.69E-46 |
| MS.gene06097 | MS.gene27790 | -0.807744 | 4.35E-50 | -1.69E-46 |
| MS.gene060982 | MS.gene27790 | -0.880434 | 5.51E-70 | -1.69E-46 |
| MS.gene061044 | MS.gene27790 | 0.865492 | 5.68E-65 | -1.69E-46 |
| MS.gene061150 | MS.gene27790 | -0.82954 | 4.86E-55 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 56 sgRNAs with CRISPR-Local
Find 72 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CACAATTTAACCTTGGTATT+TGG | 0.131923 | 1.3:+5368107 | None:intergenic |
| TACAAGGTTCTAGTATTAAT+TGG | 0.175164 | 1.3:-5368170 | MS.gene27790:CDS |
| CTTGATCATTGAAGCCTTGT+TGG | 0.313961 | 1.3:+5368547 | None:intergenic |
| AACCACCATGTTTGAGATTA+GGG | 0.322373 | 1.3:+5369203 | None:intergenic |
| CAACCATCAAAAGTAGTATT+AGG | 0.326180 | 1.3:+5368468 | None:intergenic |
| CTTGTTGCTGCTGATCTTTA+CGG | 0.335855 | 1.3:+5368751 | None:intergenic |
| ACAAGGTTCTAGTATTAATT+GGG | 0.336603 | 1.3:-5368169 | MS.gene27790:CDS |
| AAACCACCATGTTTGAGATT+AGG | 0.366318 | 1.3:+5369202 | None:intergenic |
| AATTATCCACCAAGATTTGA+TGG | 0.368986 | 1.3:-5368243 | MS.gene27790:CDS |
| CATTCCAGAGATTGATCATA+TGG | 0.369915 | 1.3:-5368274 | MS.gene27790:CDS |
| ATAATGACATAAAGAACTAT+TGG | 0.370430 | 1.3:-5368809 | MS.gene27790:CDS |
| TTGGTTGTGGTTGTTATCAT+TGG | 0.385791 | 1.3:+5368356 | None:intergenic |
| GATAATGTTATCTTCTTCTT+CGG | 0.391795 | 1.3:+5369177 | None:intergenic |
| ATGTCATTATCAGTTCTTCC+TGG | 0.397545 | 1.3:+5368822 | None:intergenic |
| TTCTTGAACCAAATTTGATA+AGG | 0.407035 | 1.3:+5368650 | None:intergenic |
| TGCATGACATGTGGTAAATA+TGG | 0.407502 | 1.3:+5368624 | None:intergenic |
| AGAAAACTTCTTATGAAGCT+TGG | 0.411643 | 1.3:-5368516 | MS.gene27790:CDS |
| TGCAGCCTTTACATTAGTAT+TGG | 0.421799 | 1.3:-5369154 | MS.gene27790:CDS |
| GCTCGTAATAGAGGCAATAA+TGG | 0.432154 | 1.3:-5368729 | MS.gene27790:CDS |
| CAGCAACAAGCTCGTAATAG+AGG | 0.461617 | 1.3:-5368738 | MS.gene27790:CDS |
| AATTCCAACCCATCAAATCT+TGG | 0.462721 | 1.3:+5368234 | None:intergenic |
| TCCACCAAGATTTGATGGGT+TGG | 0.464644 | 1.3:-5368238 | MS.gene27790:CDS |
| CATTTGTTGCGAATTGTACT+TGG | 0.466808 | 1.3:+5368337 | None:intergenic |
| AACATTGATGGTAGTGGAGG+TGG | 0.467582 | 1.3:+5368582 | None:intergenic |
| CAAGTACAATTCGCAACAAA+TGG | 0.468082 | 1.3:-5368336 | MS.gene27790:CDS |
| TTGCGAATTGTACTTGGTTG+TGG | 0.482944 | 1.3:+5368343 | None:intergenic |
| AAACTTCTTATGAAGCTTGG+AGG | 0.489488 | 1.3:-5368513 | MS.gene27790:CDS |
| TTTACATTAGTATTGGAAGC+AGG | 0.496580 | 1.3:-5369147 | MS.gene27790:intron |
| GATACCATATGATCAATCTC+TGG | 0.503391 | 1.3:+5368270 | None:intergenic |
| TTTGTGTATGACAACATTGA+TGG | 0.508144 | 1.3:+5368570 | None:intergenic |
| TGCTTCCAATACTAATGTAA+AGG | 0.512738 | 1.3:+5369149 | None:intergenic |
| GTGGAAAGAGTTGTCGTCTC+CGG | 0.522056 | 1.3:-5369243 | MS.gene27790:CDS |
| CACAAATCACAATTTAACCT+TGG | 0.527729 | 1.3:+5368100 | None:intergenic |
| CATTGATGGTAGTGGAGGTG+GGG | 0.533607 | 1.3:+5368584 | None:intergenic |
| ACATTGATGGTAGTGGAGGT+GGG | 0.534119 | 1.3:+5368583 | None:intergenic |
| ATAATTGCAGCTCAATTGCC+AGG | 0.552173 | 1.3:-5368840 | MS.gene27790:CDS |
| ATTATCCACCAAGATTTGAT+GGG | 0.556403 | 1.3:-5368242 | MS.gene27790:CDS |
| TATGACAACATTGATGGTAG+TGG | 0.558740 | 1.3:+5368576 | None:intergenic |
| ATTGATGGTAGTGGAGGTGG+GGG | 0.560501 | 1.3:+5368585 | None:intergenic |
| GGCGAAGATAGTTTAGCCAC+CGG | 0.569935 | 1.3:+5369224 | None:intergenic |
| TAAAGAACTATTGGAATACA+AGG | 0.580554 | 1.3:-5368800 | MS.gene27790:CDS |
| AAGATGATGATAACTTGAAG+TGG | 0.584448 | 1.3:+5368137 | None:intergenic |
| CTTCTTGATTCCAAATACCA+AGG | 0.584605 | 1.3:-5368117 | MS.gene27790:CDS |
| TCCAACCCATCAAATCTTGG+TGG | 0.591459 | 1.3:+5368237 | None:intergenic |
| ATTGATAATAATAAGATACA+AGG | 0.601954 | 1.3:-5368186 | MS.gene27790:CDS |
| AGTTTATGATCAAGAACATG+TGG | 0.602665 | 1.3:-5368403 | MS.gene27790:CDS |
| GAAAGAGTTGTCGTCTCCGG+TGG | 0.603936 | 1.3:-5369240 | MS.gene27790:CDS |
| CTTCGCCCTAATCTCAAACA+TGG | 0.609085 | 1.3:-5369208 | MS.gene27790:CDS |
| GACTCGGTGCAAGAAGAGCA+AGG | 0.613143 | 1.3:-5368303 | MS.gene27790:CDS |
| CAAGGTTCTAGTATTAATTG+GGG | 0.621220 | 1.3:-5368168 | MS.gene27790:CDS |
| CGCCCTAATCTCAAACATGG+TGG | 0.637157 | 1.3:-5369205 | MS.gene27790:CDS |
| TTGTCATACACAAACCAACA+AGG | 0.660089 | 1.3:-5368561 | MS.gene27790:CDS |
| GTTTATGATCAAGAACATGT+GGG | 0.665568 | 1.3:-5368402 | MS.gene27790:CDS |
| AAATGGTCAATACTTTGACT+CGG | 0.679619 | 1.3:-5368319 | MS.gene27790:CDS |
| GACAACATTGATGGTAGTGG+AGG | 0.681316 | 1.3:+5368579 | None:intergenic |
| AGCAAAGGTTGCATGACATG+TGG | 0.714384 | 1.3:+5368615 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTAAAAAAAATTCAAACTAT+TGG | + | chr1.3:5368419-5368438 | None:intergenic | 10.0% |
| !!! | ATTGATAATAATAAGATACA+AGG | - | chr1.3:5369182-5369201 | MS.gene27790:CDS | 15.0% |
| !! | ACAAAAAGTAACATATCATA+TGG | + | chr1.3:5368386-5368405 | None:intergenic | 20.0% |
| !! | ATAATGACATAAAGAACTAT+TGG | - | chr1.3:5368559-5368578 | MS.gene27790:CDS | 20.0% |
| !! | ATCTATAAAATCAAGACATA+AGG | + | chr1.3:5368342-5368361 | None:intergenic | 20.0% |
| !!! | TGAATTTTCCTTATCAAATT+TGG | - | chr1.3:5368710-5368729 | MS.gene27790:CDS | 20.0% |
| !!! | TGATATGTTACTTTTTGTTT+TGG | - | chr1.3:5368388-5368407 | MS.gene27790:CDS | 20.0% |
| ! | GATAATGTTATCTTCTTCTT+CGG | + | chr1.3:5368194-5368213 | None:intergenic | 25.0% |
| ! | TAAAGAACTATTGGAATACA+AGG | - | chr1.3:5368568-5368587 | MS.gene27790:CDS | 25.0% |
| ! | TTCTTGAACCAAATTTGATA+AGG | + | chr1.3:5368721-5368740 | None:intergenic | 25.0% |
| !! | ACAAGGTTCTAGTATTAATT+GGG | - | chr1.3:5369199-5369218 | MS.gene27790:CDS | 25.0% |
| !! | TACAAGGTTCTAGTATTAAT+TGG | - | chr1.3:5369198-5369217 | MS.gene27790:CDS | 25.0% |
| AAATGGTCAATACTTTGACT+CGG | - | chr1.3:5369049-5369068 | MS.gene27790:intron | 30.0% | |
| AAGATGATGATAACTTGAAG+TGG | + | chr1.3:5369234-5369253 | None:intergenic | 30.0% | |
| AATTATCCACCAAGATTTGA+TGG | - | chr1.3:5369125-5369144 | MS.gene27790:intron | 30.0% | |
| AGAAAACTTCTTATGAAGCT+TGG | - | chr1.3:5368852-5368871 | MS.gene27790:intron | 30.0% | |
| AGTTTATGATCAAGAACATG+TGG | - | chr1.3:5368965-5368984 | MS.gene27790:intron | 30.0% | |
| ATTATCCACCAAGATTTGAT+GGG | - | chr1.3:5369126-5369145 | MS.gene27790:intron | 30.0% | |
| CAACCATCAAAAGTAGTATT+AGG | + | chr1.3:5368903-5368922 | None:intergenic | 30.0% | |
| CTTTCATACCAAACCAAAAA+GGG | + | chr1.3:5368498-5368517 | None:intergenic | 30.0% | |
| GTTTATGATCAAGAACATGT+GGG | - | chr1.3:5368966-5368985 | MS.gene27790:intron | 30.0% | |
| TGCTTCCAATACTAATGTAA+AGG | + | chr1.3:5368222-5368241 | None:intergenic | 30.0% | |
| TTTGTGTATGACAACATTGA+TGG | + | chr1.3:5368801-5368820 | None:intergenic | 30.0% | |
| ! | AAGGTTGAAAAAGAAGCTTT+TGG | - | chr1.3:5368587-5368606 | MS.gene27790:CDS | 30.0% |
| ! | AGGTTGAAAAAGAAGCTTTT+GGG | - | chr1.3:5368588-5368607 | MS.gene27790:CDS | 30.0% |
| ! | CAAGGTTCTAGTATTAATTG+GGG | - | chr1.3:5369200-5369219 | MS.gene27790:CDS | 30.0% |
| ! | TTTACATTAGTATTGGAAGC+AGG | - | chr1.3:5368221-5368240 | MS.gene27790:CDS | 30.0% |
| !! | CATCCTAATACTACTTTTGA+TGG | - | chr1.3:5368897-5368916 | MS.gene27790:intron | 30.0% |
| AAACTTCTTATGAAGCTTGG+AGG | - | chr1.3:5368855-5368874 | MS.gene27790:intron | 35.0% | |
| AATTCCAACCCATCAAATCT+TGG | + | chr1.3:5369137-5369156 | None:intergenic | 35.0% | |
| ATGTCATTATCAGTTCTTCC+TGG | + | chr1.3:5368549-5368568 | None:intergenic | 35.0% | |
| CAAGTACAATTCGCAACAAA+TGG | - | chr1.3:5369032-5369051 | MS.gene27790:intron | 35.0% | |
| CATTCCAGAGATTGATCATA+TGG | - | chr1.3:5369094-5369113 | MS.gene27790:intron | 35.0% | |
| CTTCTTGATTCCAAATACCA+AGG | - | chr1.3:5369251-5369270 | MS.gene27790:CDS | 35.0% | |
| GATACCATATGATCAATCTC+TGG | + | chr1.3:5369101-5369120 | None:intergenic | 35.0% | |
| GCTTTCATACCAAACCAAAA+AGG | + | chr1.3:5368499-5368518 | None:intergenic | 35.0% | |
| TGCAGCCTTTACATTAGTAT+TGG | - | chr1.3:5368214-5368233 | MS.gene27790:CDS | 35.0% | |
| TGCATGACATGTGGTAAATA+TGG | + | chr1.3:5368747-5368766 | None:intergenic | 35.0% | |
| TTGGTTGTGGTTGTTATCAT+TGG | + | chr1.3:5369015-5369034 | None:intergenic | 35.0% | |
| TTGTCATACACAAACCAACA+AGG | - | chr1.3:5368807-5368826 | MS.gene27790:CDS | 35.0% | |
| ! | AAACCACCATGTTTGAGATT+AGG | + | chr1.3:5368169-5368188 | None:intergenic | 35.0% |
| ! | AACCACCATGTTTGAGATTA+GGG | + | chr1.3:5368168-5368187 | None:intergenic | 35.0% |
| ! | CATTTGTTGCGAATTGTACT+TGG | + | chr1.3:5369034-5369053 | None:intergenic | 35.0% |
| ! | GGTTGAAAAAGAAGCTTTTG+GGG | - | chr1.3:5368589-5368608 | MS.gene27790:CDS | 35.0% |
| ! | TATGACAACATTGATGGTAG+TGG | + | chr1.3:5368795-5368814 | None:intergenic | 35.0% |
| ! | TGAAAAGTGAAGACCCTTTT+TGG | - | chr1.3:5368482-5368501 | MS.gene27790:CDS | 35.0% |
| !!! | GATGGGTTGGAATTCTTTTA+TGG | - | chr1.3:5369143-5369162 | MS.gene27790:intron | 35.0% |
| !!! | TTTTGGTTTGGTATGAAAGC+AGG | - | chr1.3:5368499-5368518 | MS.gene27790:CDS | 35.0% |
| ATAATTGCAGCTCAATTGCC+AGG | - | chr1.3:5368528-5368547 | MS.gene27790:CDS | 40.0% | |
| CTTGTTGCTGCTGATCTTTA+CGG | + | chr1.3:5368620-5368639 | None:intergenic | 40.0% | |
| GCTCGTAATAGAGGCAATAA+TGG | - | chr1.3:5368639-5368658 | MS.gene27790:CDS | 40.0% | |
| TTGCGAATTGTACTTGGTTG+TGG | + | chr1.3:5369028-5369047 | None:intergenic | 40.0% | |
| ! | AAGCTTGGAGGAAGATTTTC+AGG | - | chr1.3:5368867-5368886 | MS.gene27790:intron | 40.0% |
| ! | CTTGATCATTGAAGCCTTGT+TGG | + | chr1.3:5368824-5368843 | None:intergenic | 40.0% |
| !!! | AGTGAAGACCCTTTTTGGTT+TGG | - | chr1.3:5368487-5368506 | MS.gene27790:CDS | 40.0% |
| AGCAAAGGTTGCATGACATG+TGG | + | chr1.3:5368756-5368775 | None:intergenic | 45.0% | |
| CAGCAACAAGCTCGTAATAG+AGG | - | chr1.3:5368630-5368649 | MS.gene27790:CDS | 45.0% | |
| CTTCGCCCTAATCTCAAACA+TGG | - | chr1.3:5368160-5368179 | MS.gene27790:CDS | 45.0% | |
| TCCAACCCATCAAATCTTGG+TGG | + | chr1.3:5369134-5369153 | None:intergenic | 45.0% | |
| ! | TCCACCAAGATTTGATGGGT+TGG | - | chr1.3:5369130-5369149 | MS.gene27790:intron | 45.0% |
| !! | AACATTGATGGTAGTGGAGG+TGG | + | chr1.3:5368789-5368808 | None:intergenic | 45.0% |
| !! | ACATTGATGGTAGTGGAGGT+GGG | + | chr1.3:5368788-5368807 | None:intergenic | 45.0% |
| !! | GACAACATTGATGGTAGTGG+AGG | + | chr1.3:5368792-5368811 | None:intergenic | 45.0% |
| !! | TGGTTTGGTATGAAAGCAGG+TGG | - | chr1.3:5368502-5368521 | MS.gene27790:CDS | 45.0% |
| CGCCCTAATCTCAAACATGG+TGG | - | chr1.3:5368163-5368182 | MS.gene27790:CDS | 50.0% | |
| GGCGAAGATAGTTTAGCCAC+CGG | + | chr1.3:5368147-5368166 | None:intergenic | 50.0% | |
| GTGGAAAGAGTTGTCGTCTC+CGG | - | chr1.3:5368125-5368144 | MS.gene27790:CDS | 50.0% | |
| !! | ATTGATGGTAGTGGAGGTGG+GGG | + | chr1.3:5368786-5368805 | None:intergenic | 50.0% |
| !! | CATTGATGGTAGTGGAGGTG+GGG | + | chr1.3:5368787-5368806 | None:intergenic | 50.0% |
| GAAAGAGTTGTCGTCTCCGG+TGG | - | chr1.3:5368128-5368147 | MS.gene27790:CDS | 55.0% | |
| !! | GACTCGGTGCAAGAAGAGCA+AGG | - | chr1.3:5369065-5369084 | MS.gene27790:intron | 55.0% |
| !! | GGTGGGGGTGTTGATAGCAA+AGG | + | chr1.3:5368771-5368790 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 5368113 | 5369277 | 5368113 | ID=MS.gene27790 |
| chr1.3 | mRNA | 5368113 | 5369277 | 5368113 | ID=MS.gene27790.t1;Parent=MS.gene27790 |
| chr1.3 | exon | 5369148 | 5369277 | 5369148 | ID=MS.gene27790.t1.exon1;Parent=MS.gene27790.t1 |
| chr1.3 | CDS | 5369148 | 5369277 | 5369148 | ID=cds.MS.gene27790.t1;Parent=MS.gene27790.t1 |
| chr1.3 | exon | 5368113 | 5368869 | 5368113 | ID=MS.gene27790.t1.exon2;Parent=MS.gene27790.t1 |
| chr1.3 | CDS | 5368113 | 5368869 | 5368113 | ID=cds.MS.gene27790.t1;Parent=MS.gene27790.t1 |
| Gene Sequence |
| Protein sequence |
