Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene92773.t1 | XP_003623643.1 | 96.7 | 246 | 4 | 2 | 1 | 243 | 1 | 245 | 2.70E-128 | 468 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene92773.t1 | A0A0R0IHP4 | 85.9 | 248 | 29 | 3 | 1 | 243 | 1 | 247 | 4.0e-117 | 422.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene92773.t1 | G7KY73 | 96.7 | 246 | 4 | 2 | 1 | 243 | 1 | 245 | 1.9e-128 | 468.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene92773.t1 | TR | GNAT |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene92773 | 0.824655 | 7.18E-54 | -1.69E-46 |
| MS.gene049149 | MS.gene92773 | 0.806979 | 6.32E-50 | -1.69E-46 |
| MS.gene049150 | MS.gene92773 | 0.802286 | 6.03E-49 | -1.69E-46 |
| MS.gene049153 | MS.gene92773 | 0.808003 | 3.83E-50 | -1.69E-46 |
| MS.gene049170 | MS.gene92773 | 0.832243 | 1.06E-55 | -1.69E-46 |
| MS.gene049236 | MS.gene92773 | -0.814419 | 1.56E-51 | -1.69E-46 |
| MS.gene049284 | MS.gene92773 | 0.811666 | 6.25E-51 | -1.69E-46 |
| MS.gene049346 | MS.gene92773 | 0.822917 | 1.83E-53 | -1.69E-46 |
| MS.gene049351 | MS.gene92773 | 0.850795 | 1.35E-60 | -1.69E-46 |
| MS.gene049356 | MS.gene92773 | 0.827006 | 1.99E-54 | -1.69E-46 |
| MS.gene049427 | MS.gene92773 | 0.813715 | 2.22E-51 | -1.69E-46 |
| MS.gene049488 | MS.gene92773 | 0.81806 | 2.39E-52 | -1.69E-46 |
| MS.gene049491 | MS.gene92773 | 0.818349 | 2.05E-52 | -1.69E-46 |
| MS.gene049609 | MS.gene92773 | 0.80585 | 1.09E-49 | -1.69E-46 |
| MS.gene049661 | MS.gene92773 | 0.867574 | 1.24E-65 | -1.69E-46 |
| MS.gene049662 | MS.gene92773 | 0.867144 | 1.70E-65 | -1.69E-46 |
| MS.gene049758 | MS.gene92773 | 0.84925 | 3.65E-60 | -1.69E-46 |
| MS.gene049805 | MS.gene92773 | 0.81576 | 7.84E-52 | -1.69E-46 |
| MS.gene049910 | MS.gene92773 | 0.83107 | 2.06E-55 | -1.69E-46 |
| MS.gene050076 | MS.gene92773 | 0.809069 | 2.27E-50 | -1.69E-46 |
| MS.gene050231 | MS.gene92773 | 0.803078 | 4.14E-49 | -1.69E-46 |
| MS.gene050301 | MS.gene92773 | 0.873039 | 2.00E-67 | -1.69E-46 |
| MS.gene050397 | MS.gene92773 | 0.861114 | 1.29E-63 | -1.69E-46 |
| MS.gene050404 | MS.gene92773 | 0.822068 | 2.89E-53 | -1.69E-46 |
| MS.gene050406 | MS.gene92773 | 0.859867 | 3.07E-63 | -1.69E-46 |
| MS.gene050426 | MS.gene92773 | -0.865476 | 5.74E-65 | -1.69E-46 |
| MS.gene050432 | MS.gene92773 | 0.819413 | 1.18E-52 | -1.69E-46 |
| MS.gene050464 | MS.gene92773 | 0.879422 | 1.26E-69 | -1.69E-46 |
| MS.gene050529 | MS.gene92773 | 0.893694 | 4.95E-75 | -1.69E-46 |
| MS.gene050593 | MS.gene92773 | 0.81675 | 4.71E-52 | -1.69E-46 |
| MS.gene050625 | MS.gene92773 | 0.811152 | 8.08E-51 | -1.69E-46 |
| MS.gene050642 | MS.gene92773 | 0.804079 | 2.57E-49 | -1.69E-46 |
| MS.gene050670 | MS.gene92773 | 0.915089 | 8.90E-85 | -1.69E-46 |
| MS.gene050812 | MS.gene92773 | 0.817923 | 2.56E-52 | -1.69E-46 |
| MS.gene050971 | MS.gene92773 | 0.842687 | 2.22E-58 | -1.69E-46 |
| MS.gene05101 | MS.gene92773 | 0.840127 | 1.05E-57 | -1.69E-46 |
| MS.gene05105 | MS.gene92773 | 0.89918 | 2.56E-77 | -1.69E-46 |
| MS.gene051387 | MS.gene92773 | 0.818931 | 1.51E-52 | -1.69E-46 |
| MS.gene051471 | MS.gene92773 | 0.826905 | 2.10E-54 | -1.69E-46 |
| MS.gene051525 | MS.gene92773 | 0.857421 | 1.65E-62 | -1.69E-46 |
| MS.gene051582 | MS.gene92773 | 0.865082 | 7.64E-65 | -1.69E-46 |
| MS.gene051605 | MS.gene92773 | 0.824361 | 8.41E-54 | -1.69E-46 |
| MS.gene051666 | MS.gene92773 | 0.832597 | 8.63E-56 | -1.69E-46 |
| MS.gene051860 | MS.gene92773 | 0.852592 | 4.17E-61 | -1.69E-46 |
| MS.gene051877 | MS.gene92773 | 0.831374 | 1.73E-55 | -1.69E-46 |
| MS.gene051983 | MS.gene92773 | 0.811198 | 7.89E-51 | -1.69E-46 |
| MS.gene052011 | MS.gene92773 | -0.872814 | 2.38E-67 | -1.69E-46 |
| MS.gene052077 | MS.gene92773 | 0.859417 | 4.20E-63 | -1.69E-46 |
| MS.gene052078 | MS.gene92773 | 0.872077 | 4.19E-67 | -1.69E-46 |
| MS.gene052128 | MS.gene92773 | -0.827937 | 1.19E-54 | -1.69E-46 |
| MS.gene052134 | MS.gene92773 | 0.804271 | 2.34E-49 | -1.69E-46 |
| MS.gene052135 | MS.gene92773 | 0.815249 | 1.02E-51 | -1.69E-46 |
| MS.gene052178 | MS.gene92773 | 0.825478 | 4.59E-54 | -1.69E-46 |
| MS.gene052188 | MS.gene92773 | 0.89395 | 3.90E-75 | -1.69E-46 |
| MS.gene052253 | MS.gene92773 | 0.921062 | 5.79E-88 | -1.69E-46 |
| MS.gene052310 | MS.gene92773 | 0.892858 | 1.08E-74 | -1.69E-46 |
| MS.gene052322 | MS.gene92773 | 0.853217 | 2.76E-61 | -1.69E-46 |
| MS.gene05233 | MS.gene92773 | -0.80302 | 4.25E-49 | -1.69E-46 |
| MS.gene052340 | MS.gene92773 | 0.88396 | 2.88E-71 | -1.69E-46 |
| MS.gene05240 | MS.gene92773 | -0.804167 | 2.46E-49 | -1.69E-46 |
| MS.gene052414 | MS.gene92773 | 0.827694 | 1.36E-54 | -1.69E-46 |
| MS.gene052421 | MS.gene92773 | 0.846233 | 2.47E-59 | -1.69E-46 |
| MS.gene052481 | MS.gene92773 | 0.873849 | 1.07E-67 | -1.69E-46 |
| MS.gene052484 | MS.gene92773 | 0.839971 | 1.15E-57 | -1.69E-46 |
| MS.gene052485 | MS.gene92773 | 0.87475 | 5.29E-68 | -1.69E-46 |
| MS.gene052501 | MS.gene92773 | 0.800887 | 1.17E-48 | -1.69E-46 |
| MS.gene052505 | MS.gene92773 | 0.808232 | 3.43E-50 | -1.69E-46 |
| MS.gene052767 | MS.gene92773 | 0.804307 | 2.30E-49 | -1.69E-46 |
| MS.gene052917 | MS.gene92773 | -0.817366 | 3.42E-52 | -1.69E-46 |
| MS.gene052982 | MS.gene92773 | 0.827507 | 1.51E-54 | -1.69E-46 |
| MS.gene053103 | MS.gene92773 | 0.824794 | 6.65E-54 | -1.69E-46 |
| MS.gene053209 | MS.gene92773 | 0.85598 | 4.38E-62 | -1.69E-46 |
| MS.gene053322 | MS.gene92773 | 0.814278 | 1.67E-51 | -1.69E-46 |
| MS.gene053449 | MS.gene92773 | 0.810139 | 1.34E-50 | -1.69E-46 |
| MS.gene053557 | MS.gene92773 | 0.850365 | 1.78E-60 | -1.69E-46 |
| MS.gene053758 | MS.gene92773 | 0.854745 | 1.00E-61 | -1.69E-46 |
| MS.gene053836 | MS.gene92773 | 0.8664 | 2.93E-65 | -1.69E-46 |
| MS.gene053912 | MS.gene92773 | 0.824247 | 8.95E-54 | -1.69E-46 |
| MS.gene053928 | MS.gene92773 | 0.80238 | 5.77E-49 | -1.69E-46 |
| MS.gene054010 | MS.gene92773 | 0.811594 | 6.48E-51 | -1.69E-46 |
| MS.gene054011 | MS.gene92773 | 0.830243 | 3.28E-55 | -1.69E-46 |
| MS.gene054012 | MS.gene92773 | 0.818062 | 2.38E-52 | -1.69E-46 |
| MS.gene054013 | MS.gene92773 | 0.809677 | 1.68E-50 | -1.69E-46 |
| MS.gene054123 | MS.gene92773 | 0.814821 | 1.27E-51 | -1.69E-46 |
| MS.gene054183 | MS.gene92773 | 0.854654 | 1.07E-61 | -1.69E-46 |
| MS.gene054349 | MS.gene92773 | 0.837505 | 5.00E-57 | -1.69E-46 |
| MS.gene054473 | MS.gene92773 | 0.830166 | 3.42E-55 | -1.69E-46 |
| MS.gene054556 | MS.gene92773 | 0.816468 | 5.44E-52 | -1.69E-46 |
| MS.gene054719 | MS.gene92773 | 0.813429 | 2.57E-51 | -1.69E-46 |
| MS.gene054742 | MS.gene92773 | -0.801715 | 7.90E-49 | -1.69E-46 |
| MS.gene054917 | MS.gene92773 | 0.818676 | 1.73E-52 | -1.69E-46 |
| MS.gene054918 | MS.gene92773 | 0.830838 | 2.34E-55 | -1.69E-46 |
| MS.gene054955 | MS.gene92773 | 0.827846 | 1.25E-54 | -1.69E-46 |
| MS.gene054983 | MS.gene92773 | 0.819203 | 1.31E-52 | -1.69E-46 |
| MS.gene05505 | MS.gene92773 | 0.832955 | 7.03E-56 | -1.69E-46 |
| MS.gene055116 | MS.gene92773 | 0.922043 | 1.64E-88 | -1.69E-46 |
| MS.gene055277 | MS.gene92773 | 0.861231 | 1.19E-63 | -1.69E-46 |
| MS.gene055369 | MS.gene92773 | 0.813811 | 2.12E-51 | -1.69E-46 |
| MS.gene055370 | MS.gene92773 | 0.807378 | 5.20E-50 | -1.69E-46 |
| MS.gene055412 | MS.gene92773 | 0.802926 | 4.45E-49 | -1.69E-46 |
| MS.gene055422 | MS.gene92773 | 0.867389 | 1.42E-65 | -1.69E-46 |
| MS.gene055428 | MS.gene92773 | 0.857435 | 1.64E-62 | -1.69E-46 |
| MS.gene055533 | MS.gene92773 | 0.800402 | 1.47E-48 | -1.69E-46 |
| MS.gene05553 | MS.gene92773 | 0.835127 | 2.01E-56 | -1.69E-46 |
| MS.gene055601 | MS.gene92773 | -0.821502 | 3.90E-53 | -1.69E-46 |
| MS.gene055604 | MS.gene92773 | 0.833336 | 5.65E-56 | -1.69E-46 |
| MS.gene055911 | MS.gene92773 | 0.800597 | 1.34E-48 | -1.69E-46 |
| MS.gene05602 | MS.gene92773 | 0.800454 | 1.43E-48 | -1.69E-46 |
| MS.gene056191 | MS.gene92773 | 0.882395 | 1.08E-70 | -1.69E-46 |
| MS.gene056233 | MS.gene92773 | 0.802288 | 6.03E-49 | -1.69E-46 |
| MS.gene056407 | MS.gene92773 | 0.862728 | 4.13E-64 | -1.69E-46 |
| MS.gene056410 | MS.gene92773 | 0.816333 | 5.84E-52 | -1.69E-46 |
| MS.gene056511 | MS.gene92773 | 0.861922 | 7.30E-64 | -1.69E-46 |
| MS.gene056609 | MS.gene92773 | 0.817299 | 3.54E-52 | -1.69E-46 |
| MS.gene056612 | MS.gene92773 | 0.846341 | 2.31E-59 | -1.69E-46 |
| MS.gene056659 | MS.gene92773 | 0.85417 | 1.47E-61 | -1.69E-46 |
| MS.gene056723 | MS.gene92773 | 0.822915 | 1.83E-53 | -1.69E-46 |
| MS.gene056796 | MS.gene92773 | 0.824589 | 7.44E-54 | -1.69E-46 |
| MS.gene056899 | MS.gene92773 | -0.862422 | 5.13E-64 | -1.69E-46 |
| MS.gene056979 | MS.gene92773 | 0.81063 | 1.05E-50 | -1.69E-46 |
| MS.gene05702 | MS.gene92773 | 0.876509 | 1.32E-68 | -1.69E-46 |
| MS.gene057121 | MS.gene92773 | 0.836568 | 8.67E-57 | -1.69E-46 |
| MS.gene057123 | MS.gene92773 | 0.827089 | 1.90E-54 | -1.69E-46 |
| MS.gene057124 | MS.gene92773 | 0.864911 | 8.65E-65 | -1.69E-46 |
| MS.gene057146 | MS.gene92773 | 0.843021 | 1.81E-58 | -1.69E-46 |
| MS.gene057207 | MS.gene92773 | 0.818918 | 1.53E-52 | -1.69E-46 |
| MS.gene057245 | MS.gene92773 | 0.818531 | 1.87E-52 | -1.69E-46 |
| MS.gene057310 | MS.gene92773 | 0.819948 | 8.88E-53 | -1.69E-46 |
| MS.gene05733 | MS.gene92773 | 0.804759 | 1.85E-49 | -1.69E-46 |
| MS.gene057396 | MS.gene92773 | 0.821746 | 3.43E-53 | -1.69E-46 |
| MS.gene057416 | MS.gene92773 | 0.802632 | 5.12E-49 | -1.69E-46 |
| MS.gene057448 | MS.gene92773 | 0.838685 | 2.48E-57 | -1.69E-46 |
| MS.gene057449 | MS.gene92773 | 0.824444 | 8.05E-54 | -1.69E-46 |
| MS.gene057450 | MS.gene92773 | 0.835642 | 1.49E-56 | -1.69E-46 |
| MS.gene057476 | MS.gene92773 | 0.806856 | 6.71E-50 | -1.69E-46 |
| MS.gene057749 | MS.gene92773 | 0.876859 | 9.99E-69 | -1.69E-46 |
| MS.gene057779 | MS.gene92773 | 0.805354 | 1.39E-49 | -1.69E-46 |
| MS.gene057796 | MS.gene92773 | 0.81151 | 6.75E-51 | -1.69E-46 |
| MS.gene057806 | MS.gene92773 | 0.805811 | 1.11E-49 | -1.69E-46 |
| MS.gene057823 | MS.gene92773 | 0.867469 | 1.34E-65 | -1.69E-46 |
| MS.gene057825 | MS.gene92773 | 0.828078 | 1.10E-54 | -1.69E-46 |
| MS.gene058002 | MS.gene92773 | 0.872852 | 2.31E-67 | -1.69E-46 |
| MS.gene058006 | MS.gene92773 | 0.802627 | 5.13E-49 | -1.69E-46 |
| MS.gene058007 | MS.gene92773 | 0.83256 | 8.82E-56 | -1.69E-46 |
| MS.gene058082 | MS.gene92773 | 0.836699 | 8.03E-57 | -1.69E-46 |
| MS.gene05811 | MS.gene92773 | 0.861867 | 7.58E-64 | -1.69E-46 |
| MS.gene058142 | MS.gene92773 | 0.843714 | 1.18E-58 | -1.69E-46 |
| MS.gene058218 | MS.gene92773 | -0.821868 | 3.21E-53 | -1.69E-46 |
| MS.gene058233 | MS.gene92773 | 0.864361 | 1.29E-64 | -1.69E-46 |
| MS.gene058276 | MS.gene92773 | 0.836431 | 9.40E-57 | -1.69E-46 |
| MS.gene058293 | MS.gene92773 | 0.838117 | 3.48E-57 | -1.69E-46 |
| MS.gene058365 | MS.gene92773 | 0.80351 | 3.37E-49 | -1.69E-46 |
| MS.gene058376 | MS.gene92773 | 0.842442 | 2.58E-58 | -1.69E-46 |
| MS.gene058444 | MS.gene92773 | 0.834372 | 3.11E-56 | -1.69E-46 |
| MS.gene058660 | MS.gene92773 | 0.88717 | 1.80E-72 | -1.69E-46 |
| MS.gene058700 | MS.gene92773 | 0.8229 | 1.85E-53 | -1.69E-46 |
| MS.gene058710 | MS.gene92773 | 0.84844 | 6.12E-60 | -1.69E-46 |
| MS.gene058787 | MS.gene92773 | 0.82503 | 5.85E-54 | -1.69E-46 |
| MS.gene058845 | MS.gene92773 | 0.815094 | 1.10E-51 | -1.69E-46 |
| MS.gene05886 | MS.gene92773 | 0.86464 | 1.05E-64 | -1.69E-46 |
| MS.gene058928 | MS.gene92773 | 0.887961 | 9.00E-73 | -1.69E-46 |
| MS.gene059011 | MS.gene92773 | 0.826864 | 2.15E-54 | -1.69E-46 |
| MS.gene05907 | MS.gene92773 | 0.872896 | 2.24E-67 | -1.69E-46 |
| MS.gene059082 | MS.gene92773 | 0.809444 | 1.89E-50 | -1.69E-46 |
| MS.gene059141 | MS.gene92773 | 0.860688 | 1.73E-63 | -1.69E-46 |
| MS.gene059285 | MS.gene92773 | 0.876472 | 1.36E-68 | -1.69E-46 |
| MS.gene059294 | MS.gene92773 | 0.859742 | 3.35E-63 | -1.69E-46 |
| MS.gene059366 | MS.gene92773 | 0.84966 | 2.80E-60 | -1.69E-46 |
| MS.gene059420 | MS.gene92773 | 0.886593 | 2.99E-72 | -1.69E-46 |
| MS.gene059462 | MS.gene92773 | 0.815042 | 1.13E-51 | -1.69E-46 |
| MS.gene059518 | MS.gene92773 | 0.832791 | 7.73E-56 | -1.69E-46 |
| MS.gene059536 | MS.gene92773 | 0.854411 | 1.25E-61 | -1.69E-46 |
| MS.gene059597 | MS.gene92773 | 0.848919 | 4.51E-60 | -1.69E-46 |
| MS.gene059676 | MS.gene92773 | 0.834521 | 2.86E-56 | -1.69E-46 |
| MS.gene059688 | MS.gene92773 | 0.909776 | 3.92E-82 | -1.69E-46 |
| MS.gene059692 | MS.gene92773 | 0.900546 | 6.57E-78 | -1.69E-46 |
| MS.gene059695 | MS.gene92773 | 0.901996 | 1.52E-78 | -1.69E-46 |
| MS.gene059807 | MS.gene92773 | 0.833439 | 5.33E-56 | -1.69E-46 |
| MS.gene05984 | MS.gene92773 | 0.89152 | 3.69E-74 | -1.69E-46 |
| MS.gene059894 | MS.gene92773 | 0.841216 | 5.44E-58 | -1.69E-46 |
| MS.gene059960 | MS.gene92773 | 0.802149 | 6.43E-49 | -1.69E-46 |
| MS.gene060247 | MS.gene92773 | 0.812324 | 4.49E-51 | -1.69E-46 |
| MS.gene06037 | MS.gene92773 | 0.840587 | 7.95E-58 | -1.69E-46 |
| MS.gene060403 | MS.gene92773 | 0.873101 | 1.91E-67 | -1.69E-46 |
| MS.gene060407 | MS.gene92773 | 0.820317 | 7.31E-53 | -1.69E-46 |
| MS.gene060804 | MS.gene92773 | 0.82858 | 8.31E-55 | -1.69E-46 |
| MS.gene060818 | MS.gene92773 | 0.810365 | 1.20E-50 | -1.69E-46 |
| MS.gene060837 | MS.gene92773 | 0.84123 | 5.39E-58 | -1.69E-46 |
| MS.gene06090 | MS.gene92773 | 0.801134 | 1.04E-48 | -1.69E-46 |
| MS.gene060986 | MS.gene92773 | 0.822872 | 1.88E-53 | -1.69E-46 |
| MS.gene061041 | MS.gene92773 | 0.821356 | 4.22E-53 | -1.69E-46 |
| MS.gene061049 | MS.gene92773 | 0.903701 | 2.64E-79 | -1.69E-46 |
| MS.gene061051 | MS.gene92773 | -0.826846 | 2.17E-54 | -1.69E-46 |
| MS.gene061154 | MS.gene92773 | 0.868769 | 5.10E-66 | -1.69E-46 |
| MS.gene061159 | MS.gene92773 | 0.82092 | 5.31E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene92773.t1 | MTR_7g073990 | 96.748 | 246 | 4 | 2 | 1 | 243 | 1 | 245 | 1.24e-174 | 480 |
| MS.gene92773.t1 | MTR_1g018030 | 44.295 | 149 | 72 | 3 | 95 | 240 | 44 | 184 | 1.39e-31 | 115 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene92773.t1 | AT1G32070 | 66.957 | 230 | 62 | 4 | 26 | 242 | 28 | 256 | 3.74e-104 | 302 |
| MS.gene92773.t1 | AT1G32070 | 66.234 | 231 | 63 | 4 | 26 | 242 | 27 | 256 | 3.88e-103 | 300 |
| MS.gene92773.t1 | AT1G32070 | 66.234 | 231 | 63 | 4 | 26 | 242 | 28 | 257 | 4.02e-103 | 300 |
| MS.gene92773.t1 | AT1G26220 | 41.353 | 133 | 67 | 2 | 109 | 240 | 67 | 189 | 2.62e-27 | 104 |
Find 55 sgRNAs with CRISPR-Local
Find 199 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGAAAACTTCCTTATCAATT+TGG | 0.118919 | 7.4:+30952392 | None:intergenic |
| ATGCCTTCAATGCCACAATT+TGG | 0.217116 | 7.4:-30953654 | MS.gene92773:CDS |
| TTCAGCTCAAGGCTGGATTT+TGG | 0.218238 | 7.4:-30955249 | MS.gene92773:CDS |
| CTGAAAAGTCCTCAACTTTC+TGG | 0.221139 | 7.4:+30955267 | None:intergenic |
| AATGAACAAAAGATATTAAT+TGG | 0.255156 | 7.4:-30953700 | MS.gene92773:CDS |
| GAGCAAATATTGTTCTCTTC+AGG | 0.294940 | 7.4:-30954453 | MS.gene92773:CDS |
| GAAAACTTCCTTATCAATTT+GGG | 0.297922 | 7.4:+30952393 | None:intergenic |
| GCTGACCCAGAGGGCATAAA+AGG | 0.303809 | 7.4:-30952428 | MS.gene92773:CDS |
| TGCCTTCAATGCCACAATTT+GGG | 0.345095 | 7.4:-30953653 | MS.gene92773:CDS |
| ATTCTATAGGGCCAAGGTCT+TGG | 0.389671 | 7.4:-30952666 | MS.gene92773:intron |
| GCAGCAGCTAATTTCGATAA+TGG | 0.399700 | 7.4:+30953923 | None:intergenic |
| AGAAAGAGAATTGAGATTGA+GGG | 0.407089 | 7.4:+30955462 | None:intergenic |
| AAGAAAGAGAATTGAGATTG+AGG | 0.421988 | 7.4:+30955461 | None:intergenic |
| ATTTGCTCAATTGTTCCATC+AGG | 0.431467 | 7.4:+30954468 | None:intergenic |
| AAAGGGTAATTAAGATTAGC+AGG | 0.433746 | 7.4:+30955388 | None:intergenic |
| AGGGCATAAAAGGCATGTTC+TGG | 0.444015 | 7.4:-30952418 | MS.gene92773:CDS |
| TCTTCTTCTTCTGTTAACTC+TGG | 0.444310 | 7.4:+30954537 | None:intergenic |
| ATCCCAAATTGTGGCATTGA+AGG | 0.446021 | 7.4:+30953651 | None:intergenic |
| TGCCAAAGTACCTGGTAGCC+TGG | 0.451629 | 7.4:+30953616 | None:intergenic |
| TGAGTAAAGAGTGGATGAAA+GGG | 0.463982 | 7.4:+30955427 | None:intergenic |
| CCTAGTTGATCCAGGCTACC+AGG | 0.486692 | 7.4:-30953626 | MS.gene92773:intron |
| TTGAGTAAAGAGTGGATGAA+AGG | 0.490999 | 7.4:+30955426 | None:intergenic |
| ATAAGAAAGTCACCAGGGTC+AGG | 0.499788 | 7.4:-30953863 | MS.gene92773:intron |
| TGGGATGTCCTAGTTGATCC+AGG | 0.505992 | 7.4:-30953634 | MS.gene92773:CDS |
| TTTGACCTGTATTAGCAAAA+GGG | 0.511224 | 7.4:+30955371 | None:intergenic |
| TTTGGGAGTCAATTAAATCT+GGG | 0.516563 | 7.4:-30955231 | MS.gene92773:intron |
| CAAATATTGTTCTCTTCAGG+TGG | 0.543956 | 7.4:-30954450 | MS.gene92773:CDS |
| GATTTGATTCTATAGGGCCA+AGG | 0.548964 | 7.4:-30952672 | MS.gene92773:intron |
| CAAGAGCTTTACCAAGACCT+TGG | 0.549605 | 7.4:+30952655 | None:intergenic |
| AGCACAAACTCTTGAGGTAG+AGG | 0.550148 | 7.4:+30954507 | None:intergenic |
| CCTGGTAGCCTGGATCAACT+AGG | 0.553781 | 7.4:+30953626 | None:intergenic |
| ACAAAAGATATTAATTGGCA+TGG | 0.555166 | 7.4:-30953695 | MS.gene92773:CDS |
| AAATTGTGGCATTGAAGGCA+TGG | 0.561363 | 7.4:+30953656 | None:intergenic |
| AACTGAGTTTGAGTAAAGAG+TGG | 0.562198 | 7.4:+30955418 | None:intergenic |
| GGCATGGTCTGATGTAGCAC+GGG | 0.584570 | 7.4:+30953672 | None:intergenic |
| GGGTTTGAAGCTGACCCAGA+GGG | 0.584967 | 7.4:-30952437 | MS.gene92773:CDS |
| GATACGCACCTTGTCACAGA+GGG | 0.585718 | 7.4:+30954401 | None:intergenic |
| TCAACAAGCACAAACTCTTG+AGG | 0.586333 | 7.4:+30954501 | None:intergenic |
| ACTTTGTTCGCAGATAGTAA+AGG | 0.599684 | 7.4:-30952585 | MS.gene92773:intron |
| AACTAGGACATCCCAAATTG+TGG | 0.601622 | 7.4:+30953642 | None:intergenic |
| TCTTCAAGCCCTCTGTGACA+AGG | 0.604383 | 7.4:-30954409 | MS.gene92773:intron |
| ATATTATTATTACCTGACCC+TGG | 0.611994 | 7.4:+30953851 | None:intergenic |
| AGGCATGGTCTGATGTAGCA+CGG | 0.613503 | 7.4:+30953671 | None:intergenic |
| GTTGAAAAGACTGAACCTGA+TGG | 0.616747 | 7.4:-30954483 | MS.gene92773:CDS |
| TATTCTATAAGAAAGTCACC+AGG | 0.624420 | 7.4:-30953869 | MS.gene92773:CDS |
| TTTCAGCTACCAGAAAGTTG+AGG | 0.631114 | 7.4:-30955276 | MS.gene92773:intron |
| CATCTCTTTAACAGGTAGGG+TGG | 0.637083 | 7.4:-30953955 | MS.gene92773:intron |
| AACAGGTAGGGTGGCCTCGT+AGG | 0.640562 | 7.4:-30953946 | MS.gene92773:intron |
| AATTTCGATAATGGCCTACG+AGG | 0.672834 | 7.4:+30953932 | None:intergenic |
| AGGGTTTGAAGCTGACCCAG+AGG | 0.695850 | 7.4:-30952438 | MS.gene92773:CDS |
| CTCTGGATCGATGACCTGTG+TGG | 0.696955 | 7.4:+30954554 | None:intergenic |
| ATTCTATAAGAAAGTCACCA+GGG | 0.724149 | 7.4:-30953868 | MS.gene92773:CDS |
| GATGAAGAATAACACCACAC+AGG | 0.731975 | 7.4:-30954568 | MS.gene92773:CDS |
| AGATACGCACCTTGTCACAG+AGG | 0.742856 | 7.4:+30954400 | None:intergenic |
| CTTTCTTATAGAATACAGAG+AGG | 0.746297 | 7.4:+30953877 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATTAAATACAATTCAAA+GGG | - | chr7.4:30952695-30952714 | MS.gene92773:intron | 10.0% |
| !! | AAATTAAATACAATTCAAAG+GGG | - | chr7.4:30952696-30952715 | MS.gene92773:intron | 15.0% |
| !! | AATATAGATACAAAAATGAA+AGG | + | chr7.4:30953666-30953685 | None:intergenic | 15.0% |
| !! | AATGAACAAAAGATATTAAT+TGG | - | chr7.4:30954175-30954194 | MS.gene92773:intron | 15.0% |
| !! | CATAAAAGATAAAAGTAATT+TGG | + | chr7.4:30955102-30955121 | None:intergenic | 15.0% |
| !! | GAAAATTAAATACAATTCAA+AGG | - | chr7.4:30952694-30952713 | MS.gene92773:intron | 15.0% |
| !! | TTTAAATTAATATGACATCT+AGG | + | chr7.4:30954617-30954636 | None:intergenic | 15.0% |
| !!! | ATTGTATTTAATTTTCAGAA+TGG | + | chr7.4:30952690-30952709 | None:intergenic | 15.0% |
| !!! | GAACATAATCATATTTTTTT+GGG | + | chr7.4:30953004-30953023 | None:intergenic | 15.0% |
| !!! | TTTTAGTTTTTTATACGTAT+AGG | - | chr7.4:30953147-30953166 | MS.gene92773:intron | 15.0% |
| !! | AAATTATTAAACTATACCGA+AGG | + | chr7.4:30953772-30953791 | None:intergenic | 20.0% |
| !! | ACAAATTTGAAAAACACATT+AGG | - | chr7.4:30955053-30955072 | MS.gene92773:intron | 20.0% |
| !! | ATACACTAATAATCATAACA+TGG | + | chr7.4:30953246-30953265 | None:intergenic | 20.0% |
| !! | CTAAATTAGAAATGAATAGA+CGG | - | chr7.4:30954408-30954427 | MS.gene92773:intron | 20.0% |
| !! | GGTTTATGTAAAATAGAAAT+TGG | - | chr7.4:30955358-30955377 | MS.gene92773:intron | 20.0% |
| !! | TTGTATTCAAAATCTATGTT+TGG | + | chr7.4:30954286-30954305 | None:intergenic | 20.0% |
| !! | TTTAAATTAAACAAACCCAA+AGG | + | chr7.4:30954576-30954595 | None:intergenic | 20.0% |
| !!! | AAAAACACATTAGGTATTTT+TGG | - | chr7.4:30955062-30955081 | MS.gene92773:intron | 20.0% |
| !!! | AATACGTTTTACATAAGTAT+TGG | - | chr7.4:30954795-30954814 | MS.gene92773:intron | 20.0% |
| !!! | ATACGTTTTACATAAGTATT+GGG | - | chr7.4:30954796-30954815 | MS.gene92773:intron | 20.0% |
| !!! | ATAGATTTTGAATACAAACT+CGG | - | chr7.4:30954289-30954308 | MS.gene92773:intron | 20.0% |
| !!! | GGAACATAATCATATTTTTT+TGG | + | chr7.4:30953005-30953024 | None:intergenic | 20.0% |
| ! | AAATAGTTCATCTCTTTAAC+AGG | - | chr7.4:30953912-30953931 | MS.gene92773:CDS | 25.0% |
| ! | ACAAAAGATATTAATTGGCA+TGG | - | chr7.4:30954180-30954199 | MS.gene92773:intron | 25.0% |
| ! | ACTAAAAATTGTATCCACAA+AGG | + | chr7.4:30953134-30953153 | None:intergenic | 25.0% |
| ! | AGTCTTAGATTTCAACAATA+AGG | + | chr7.4:30953026-30953045 | None:intergenic | 25.0% |
| ! | ATTACAATGTTAAACAACAC+AGG | + | chr7.4:30953801-30953820 | None:intergenic | 25.0% |
| ! | ATTCAAACAGTTGTTGAAAT+GGG | - | chr7.4:30954690-30954709 | MS.gene92773:intron | 25.0% |
| ! | CACTAAGATATTCATCAAAT+AGG | + | chr7.4:30954127-30954146 | None:intergenic | 25.0% |
| ! | CATTAAAAAAGTGAACCTTT+AGG | + | chr7.4:30954494-30954513 | None:intergenic | 25.0% |
| ! | CTAAAAATTGTATCCACAAA+GGG | + | chr7.4:30953133-30953152 | None:intergenic | 25.0% |
| ! | GAAGAAATAAGTTCTTAATG+TGG | + | chr7.4:30953644-30953663 | None:intergenic | 25.0% |
| ! | TATTATATGAAACTCTTCCT+TGG | - | chr7.4:30953884-30953903 | MS.gene92773:CDS | 25.0% |
| ! | TCCAGTATAAACATAGATTA+TGG | - | chr7.4:30955146-30955165 | MS.gene92773:intron | 25.0% |
| ! | TTGTGATTAAGTTAATTCGT+TGG | - | chr7.4:30954063-30954082 | MS.gene92773:intron | 25.0% |
| ! | TTTGAAAAATAGCTATATGG+TGG | - | chr7.4:30953975-30953994 | MS.gene92773:intron | 25.0% |
| !! | TAGATTTTGAATACAAACTC+GGG | - | chr7.4:30954290-30954309 | MS.gene92773:intron | 25.0% |
| !! | TGGAATTTTATCGCAATTTA+GGG | - | chr7.4:30955418-30955437 | MS.gene92773:CDS | 25.0% |
| !! | TTTAAAGTTTAAACCCACTT+GGG | - | chr7.4:30952832-30952851 | MS.gene92773:intron | 25.0% |
| !!! | ATAAGTATTGGGATTCATTT+AGG | - | chr7.4:30954807-30954826 | MS.gene92773:intron | 25.0% |
| !!! | ATTAGGTATTTTTGGATTCA+GGG | - | chr7.4:30955070-30955089 | MS.gene92773:intron | 25.0% |
| !!! | CTAAAGGTTCACTTTTTTAA+TGG | - | chr7.4:30954492-30954511 | MS.gene92773:CDS | 25.0% |
| !!! | GATGTTGATTTGATTCTATA+GGG | - | chr7.4:30955197-30955216 | MS.gene92773:intron | 25.0% |
| !!! | TCACTTTTTTAATGGTTTCA+TGG | - | chr7.4:30954500-30954519 | MS.gene92773:CDS | 25.0% |
| !!! | TCTTGGCAATCTTTTTATTT+TGG | + | chr7.4:30953053-30953072 | None:intergenic | 25.0% |
| !!! | TGATGTTGATTTGATTCTAT+AGG | - | chr7.4:30955196-30955215 | MS.gene92773:intron | 25.0% |
| !!! | TGCTTTGAAAAATAGCTATA+TGG | - | chr7.4:30953972-30953991 | MS.gene92773:intron | 25.0% |
| !!! | TTGTTGTTTGTTTTCTCTTT+TGG | - | chr7.4:30952576-30952595 | MS.gene92773:intron | 25.0% |
| AAAGGGTAATTAAGATTAGC+AGG | + | chr7.4:30952490-30952509 | None:intergenic | 30.0% | |
| AACTAGCATACACATAATCA+CGG | + | chr7.4:30953548-30953567 | None:intergenic | 30.0% | |
| AAGAAAGAGAATTGAGATTG+AGG | + | chr7.4:30952417-30952436 | None:intergenic | 30.0% | |
| ACAATTGTTAGCATGTAGAA+TGG | - | chr7.4:30952762-30952781 | MS.gene92773:intron | 30.0% | |
| ACCAGAATGTAAGTAAAGTT+TGG | + | chr7.4:30952946-30952965 | None:intergenic | 30.0% | |
| AGAAAGAGAATTGAGATTGA+GGG | + | chr7.4:30952416-30952435 | None:intergenic | 30.0% | |
| ATATTATTATTACCTGACCC+TGG | + | chr7.4:30954027-30954046 | None:intergenic | 30.0% | |
| ATTCTATAAGAAAGTCACCA+GGG | - | chr7.4:30954007-30954026 | MS.gene92773:intron | 30.0% | |
| CTTTCTTATAGAATACAGAG+AGG | + | chr7.4:30954001-30954020 | None:intergenic | 30.0% | |
| GATGAACTATTTAGTAACCA+AGG | + | chr7.4:30953904-30953923 | None:intergenic | 30.0% | |
| GATGAATATCTTAGTGTACT+TGG | - | chr7.4:30954131-30954150 | MS.gene92773:intron | 30.0% | |
| GATTAAGTTAATTCGTTGGA+TGG | - | chr7.4:30954067-30954086 | MS.gene92773:intron | 30.0% | |
| GATTCAAACAGTTGTTGAAA+TGG | - | chr7.4:30954689-30954708 | MS.gene92773:intron | 30.0% | |
| GCCATAATCTATGTTTATAC+TGG | + | chr7.4:30955150-30955169 | None:intergenic | 30.0% | |
| GGAATAATTAACTGCTTTAG+AGG | - | chr7.4:30952783-30952802 | MS.gene92773:intron | 30.0% | |
| TATTCTATAAGAAAGTCACC+AGG | - | chr7.4:30954006-30954025 | MS.gene92773:intron | 30.0% | |
| TGAAAGGAGAAACATGTTAA+GGG | + | chr7.4:30953283-30953302 | None:intergenic | 30.0% | |
| TGTTAATCAACTTGCATGTA+TGG | - | chr7.4:30952809-30952828 | MS.gene92773:intron | 30.0% | |
| TTATTCTTCATCAACCTGAA+AGG | + | chr7.4:30953299-30953318 | None:intergenic | 30.0% | |
| TTGAGTTCTTAATGTTGCTA+AGG | + | chr7.4:30953717-30953736 | None:intergenic | 30.0% | |
| TTTGACCTGTATTAGCAAAA+GGG | + | chr7.4:30952507-30952526 | None:intergenic | 30.0% | |
| TTTGGGAGTCAATTAAATCT+GGG | - | chr7.4:30952644-30952663 | MS.gene92773:CDS | 30.0% | |
| ! | AATTACCCTTTTGCTAATAC+AGG | - | chr7.4:30952499-30952518 | MS.gene92773:intron | 30.0% |
| ! | ATTTAACTTTCCCTAAGTGA+GGG | + | chr7.4:30955003-30955022 | None:intergenic | 30.0% |
| ! | GTGGAATTTTATCGCAATTT+AGG | - | chr7.4:30955417-30955436 | MS.gene92773:CDS | 30.0% |
| ! | GTTTAAAGTTTAAACCCACT+TGG | - | chr7.4:30952831-30952850 | MS.gene92773:intron | 30.0% |
| ! | TCATAAACCACATTTTGTCT+TGG | + | chr7.4:30953070-30953089 | None:intergenic | 30.0% |
| ! | TTTTAATGGTTTCATGGTTC+TGG | - | chr7.4:30954506-30954525 | MS.gene92773:CDS | 30.0% |
| ! | TTTTGACCTGTATTAGCAAA+AGG | + | chr7.4:30952508-30952527 | None:intergenic | 30.0% |
| !! | AAAAGAACACTGCTTTTGTA+TGG | + | chr7.4:30954921-30954940 | None:intergenic | 30.0% |
| !! | TTTTGGGAGTCAATTAAATC+TGG | - | chr7.4:30952643-30952662 | MS.gene92773:CDS | 30.0% |
| !!! | CAGTGTTCTTTTTTGTTTCA+AGG | - | chr7.4:30954929-30954948 | MS.gene92773:intron | 30.0% |
| !!! | CATTAGGTATTTTTGGATTC+AGG | - | chr7.4:30955069-30955088 | MS.gene92773:intron | 30.0% |
| !!! | TGGCAATCTTTTTATTTTGG+TGG | + | chr7.4:30953050-30953069 | None:intergenic | 30.0% |
| AACTGAGTTTGAGTAAAGAG+TGG | + | chr7.4:30952460-30952479 | None:intergenic | 35.0% | |
| AAGATTGCCAAGACAAAATG+TGG | - | chr7.4:30953060-30953079 | MS.gene92773:intron | 35.0% | |
| ACTTTGTTCGCAGATAGTAA+AGG | - | chr7.4:30955290-30955309 | MS.gene92773:intron | 35.0% | |
| AGTCTTAGATTTCAGCAACA+AGG | + | chr7.4:30953194-30953213 | None:intergenic | 35.0% | |
| AGTTCATCTCTTTAACAGGT+AGG | - | chr7.4:30953916-30953935 | MS.gene92773:CDS | 35.0% | |
| ATTTGCTCAATTGTTCCATC+AGG | + | chr7.4:30953410-30953429 | None:intergenic | 35.0% | |
| CAAAAAACACTCTTTCTCAC+TGG | - | chr7.4:30952523-30952542 | MS.gene92773:intron | 35.0% | |
| CAAATATTGTTCTCTTCAGG+TGG | - | chr7.4:30953425-30953444 | MS.gene92773:intron | 35.0% | |
| CAAGACATTTGCTTTAGTAG+AGG | - | chr7.4:30954531-30954550 | MS.gene92773:CDS | 35.0% | |
| CAAGTAGAGTGGTTCAAAAA+GGG | + | chr7.4:30954959-30954978 | None:intergenic | 35.0% | |
| CTCTACTAAAGCAAATGTCT+TGG | + | chr7.4:30954533-30954552 | None:intergenic | 35.0% | |
| CTGAAAGGAGAAACATGTTA+AGG | + | chr7.4:30953284-30953303 | None:intergenic | 35.0% | |
| CTTAACATGTTTCTCCTTTC+AGG | - | chr7.4:30953282-30953301 | MS.gene92773:intron | 35.0% | |
| GAGCAAATATTGTTCTCTTC+AGG | - | chr7.4:30953422-30953441 | MS.gene92773:intron | 35.0% | |
| GCCAAACTTTACTTACATTC+TGG | - | chr7.4:30952942-30952961 | MS.gene92773:intron | 35.0% | |
| GTGCACTCAATTCATATTTG+AGG | - | chr7.4:30953605-30953624 | MS.gene92773:intron | 35.0% | |
| GTTCATCTCTTTAACAGGTA+GGG | - | chr7.4:30953917-30953936 | MS.gene92773:CDS | 35.0% | |
| TCAAGTAGAGTGGTTCAAAA+AGG | + | chr7.4:30954960-30954979 | None:intergenic | 35.0% | |
| TCTTCTTCTTCTGTTAACTC+TGG | + | chr7.4:30953341-30953360 | None:intergenic | 35.0% | |
| TGAGTAAAGAGTGGATGAAA+GGG | + | chr7.4:30952451-30952470 | None:intergenic | 35.0% | |
| TGGTGAAGTTATTTGACAGA+GGG | - | chr7.4:30954151-30954170 | MS.gene92773:intron | 35.0% | |
| TTATACTGGAACAGAACACA+AGG | + | chr7.4:30955136-30955155 | None:intergenic | 35.0% | |
| TTGAATTTCATGCGCTTTCA+TGG | - | chr7.4:30955337-30955356 | MS.gene92773:intron | 35.0% | |
| TTGAGTAAAGAGTGGATGAA+AGG | + | chr7.4:30952452-30952471 | None:intergenic | 35.0% | |
| TTGGTGAAGTTATTTGACAG+AGG | - | chr7.4:30954150-30954169 | MS.gene92773:intron | 35.0% | |
| ! | AGTTCTAACGAGGAAATGAA+TGG | + | chr7.4:30954897-30954916 | None:intergenic | 35.0% |
| ! | CATTTAACTTTCCCTAAGTG+AGG | + | chr7.4:30955004-30955023 | None:intergenic | 35.0% |
| ! | TTTGTATGGAAGTTCTAACG+AGG | + | chr7.4:30954907-30954926 | None:intergenic | 35.0% |
| !! | TTGTATTTTGAATGCAGTCG+TGG | - | chr7.4:30955398-30955417 | MS.gene92773:CDS | 35.0% |
| AAAGGCCATATGACATATGG+TGG | + | chr7.4:30954558-30954577 | None:intergenic | 40.0% | |
| AACTAGGACATCCCAAATTG+TGG | + | chr7.4:30954236-30954255 | None:intergenic | 40.0% | |
| AAGACTGCTGAGACAATATG+CGG | - | chr7.4:30953208-30953227 | MS.gene92773:intron | 40.0% | |
| ACCATATGTCATATGGCCTT+TGG | - | chr7.4:30954557-30954576 | MS.gene92773:CDS | 40.0% | |
| ATCCTCACAAGAGTTTCCTT+CGG | - | chr7.4:30953753-30953772 | MS.gene92773:intron | 40.0% | |
| ATGCCTTCAATGCCACAATT+TGG | - | chr7.4:30954221-30954240 | MS.gene92773:intron | 40.0% | |
| CCATATGTCATATGGCCTTT+GGG | - | chr7.4:30954558-30954577 | MS.gene92773:CDS | 40.0% | |
| CTAACGAACATCAAGTAGAG+TGG | + | chr7.4:30954970-30954989 | None:intergenic | 40.0% | |
| CTGAAAAGTCCTCAACTTTC+TGG | + | chr7.4:30952611-30952630 | None:intergenic | 40.0% | |
| GATGAAGAATAACACCACAC+AGG | - | chr7.4:30953307-30953326 | MS.gene92773:intron | 40.0% | |
| GATTTGATTCTATAGGGCCA+AGG | - | chr7.4:30955203-30955222 | MS.gene92773:intron | 40.0% | |
| GCAGCAGCTAATTTCGATAA+TGG | + | chr7.4:30953955-30953974 | None:intergenic | 40.0% | |
| GGTGAAGTTATTTGACAGAG+GGG | - | chr7.4:30954152-30954171 | MS.gene92773:intron | 40.0% | |
| GTTGAAAAGACTGAACCTGA+TGG | - | chr7.4:30953392-30953411 | MS.gene92773:intron | 40.0% | |
| TCAACAAGCACAAACTCTTG+AGG | + | chr7.4:30953377-30953396 | None:intergenic | 40.0% | |
| TGCCTTCAATGCCACAATTT+GGG | - | chr7.4:30954222-30954241 | MS.gene92773:intron | 40.0% | |
| TGCTCTCATATGTAGCCTAA+AGG | - | chr7.4:30954476-30954495 | MS.gene92773:CDS | 40.0% | |
| TGTATCCACAAAGGGAAACA+AGG | + | chr7.4:30953125-30953144 | None:intergenic | 40.0% | |
| TTGGCCAACTATTGTTCTCA+CGG | + | chr7.4:30952927-30952946 | None:intergenic | 40.0% | |
| TTTCAGCTACCAGAAAGTTG+AGG | - | chr7.4:30952599-30952618 | MS.gene92773:CDS | 40.0% | |
| ! | AAATTGTGGCATTGAAGGCA+TGG | + | chr7.4:30954222-30954241 | None:intergenic | 40.0% |
| ! | AATTTCGATAATGGCCTACG+AGG | + | chr7.4:30953946-30953965 | None:intergenic | 40.0% |
| ! | ATCCCAAATTGTGGCATTGA+AGG | + | chr7.4:30954227-30954246 | None:intergenic | 40.0% |
| ! | CATTCGAGCTCTTTTGCAAA+GGG | - | chr7.4:30955253-30955272 | MS.gene92773:CDS | 40.0% |
| ! | TCATTCGAGCTCTTTTGCAA+AGG | - | chr7.4:30955252-30955271 | MS.gene92773:CDS | 40.0% |
| !! | CTTTTCCTTGTTTCCCTTTG+TGG | - | chr7.4:30953117-30953136 | MS.gene92773:intron | 40.0% |
| !! | GTGGTATTGACTTGGGAATT+GGG | - | chr7.4:30952863-30952882 | MS.gene92773:intron | 40.0% |
| !! | TAGCTTGGTGGTATTGACTT+GGG | - | chr7.4:30952856-30952875 | MS.gene92773:intron | 40.0% |
| !!! | TTTTTTTGGGCTTAACCCTC+CGG | + | chr7.4:30952991-30953010 | None:intergenic | 40.0% |
| AGCACAAACTCTTGAGGTAG+AGG | + | chr7.4:30953371-30953390 | None:intergenic | 45.0% | |
| ATAAGAAAGTCACCAGGGTC+AGG | - | chr7.4:30954012-30954031 | MS.gene92773:intron | 45.0% | |
| ATGAATTGAGTGCACGCACA+TGG | + | chr7.4:30953600-30953619 | None:intergenic | 45.0% | |
| ATTCTATAGGGCCAAGGTCT+TGG | - | chr7.4:30955209-30955228 | MS.gene92773:intron | 45.0% | |
| CAAGAGCTTTACCAAGACCT+TGG | + | chr7.4:30955223-30955242 | None:intergenic | 45.0% | |
| CATCTCTTTAACAGGTAGGG+TGG | - | chr7.4:30953920-30953939 | MS.gene92773:CDS | 45.0% | |
| CCCAAAGGCCATATGACATA+TGG | + | chr7.4:30954561-30954580 | None:intergenic | 45.0% | |
| CTTACATTCTGGTCGAACTC+CGG | - | chr7.4:30952953-30952972 | MS.gene92773:intron | 45.0% | |
| GAGGACCACCATATGTCATA+TGG | - | chr7.4:30954550-30954569 | MS.gene92773:CDS | 45.0% | |
| TACCGAAGGAAACTCTTGTG+AGG | + | chr7.4:30953758-30953777 | None:intergenic | 45.0% | |
| TACTGGAACAGAACACAAGG+AGG | + | chr7.4:30955133-30955152 | None:intergenic | 45.0% | |
| TAGAGTGGTTCAAAAAGGGC+TGG | + | chr7.4:30954955-30954974 | None:intergenic | 45.0% | |
| TCTCCCGTGAGAACAATAGT+TGG | - | chr7.4:30952920-30952939 | MS.gene92773:intron | 45.0% | |
| TGGCCAACTATTGTTCTCAC+GGG | + | chr7.4:30952926-30952945 | None:intergenic | 45.0% | |
| TTGAACCTGAGACCTTGAGA+AGG | + | chr7.4:30952897-30952916 | None:intergenic | 45.0% | |
| ! | AACATGCCTTTTATGCCCTC+TGG | + | chr7.4:30955456-30955475 | None:intergenic | 45.0% |
| ! | ACATGCCTTTTATGCCCTCT+GGG | + | chr7.4:30955455-30955474 | None:intergenic | 45.0% |
| ! | AGGGCATAAAAGGCATGTTC+TGG | - | chr7.4:30955457-30955476 | MS.gene92773:CDS | 45.0% |
| ! | GCTCTTTTGCAAAGGGACAT+CGG | - | chr7.4:30955260-30955279 | MS.gene92773:CDS | 45.0% |
| ! | GTTGAGGACTTTTCAGCTCA+AGG | - | chr7.4:30952615-30952634 | MS.gene92773:CDS | 45.0% |
| ! | TCAGCTCAAGGCTGGATTTT+GGG | - | chr7.4:30952627-30952646 | MS.gene92773:CDS | 45.0% |
| ! | TGTTTGGTTGCCAAAGTACC+TGG | + | chr7.4:30954270-30954289 | None:intergenic | 45.0% |
| ! | TTCAGCTCAAGGCTGGATTT+TGG | - | chr7.4:30952626-30952645 | MS.gene92773:CDS | 45.0% |
| !! | CTAGCTTGGTGGTATTGACT+TGG | - | chr7.4:30952855-30952874 | MS.gene92773:intron | 45.0% |
| !! | GGTGGTATTGACTTGGGAAT+TGG | - | chr7.4:30952862-30952881 | MS.gene92773:intron | 45.0% |
| ACTTTCCCTAAGTGAGGGTG+TGG | + | chr7.4:30954998-30955017 | None:intergenic | 50.0% | |
| AGATACGCACCTTGTCACAG+AGG | + | chr7.4:30953478-30953497 | None:intergenic | 50.0% | |
| AGGCATGGTCTGATGTAGCA+CGG | + | chr7.4:30954207-30954226 | None:intergenic | 50.0% | |
| ATCCAGGCTACCAGGTACTT+TGG | - | chr7.4:30954257-30954276 | MS.gene92773:intron | 50.0% | |
| GATACGCACCTTGTCACAGA+GGG | + | chr7.4:30953477-30953496 | None:intergenic | 50.0% | |
| TCTTCAAGCCCTCTGTGACA+AGG | - | chr7.4:30953466-30953485 | MS.gene92773:intron | 50.0% | |
| TGGGATGTCCTAGTTGATCC+AGG | - | chr7.4:30954241-30954260 | MS.gene92773:intron | 50.0% | |
| ! | AGGACTTTTCAGCTCAAGGC+TGG | - | chr7.4:30952619-30952638 | MS.gene92773:CDS | 50.0% |
| !! | TAAACCCACTTGGGCTAGCT+TGG | - | chr7.4:30952841-30952860 | MS.gene92773:intron | 50.0% |
| ACCACCAAGCTAGCCCAAGT+GGG | + | chr7.4:30952848-30952867 | None:intergenic | 55.0% | |
| ACTCCGGATTACCAGGGAAC+CGG | - | chr7.4:30952969-30952988 | MS.gene92773:intron | 55.0% | |
| CCTAGTTGATCCAGGCTACC+AGG | - | chr7.4:30954249-30954268 | MS.gene92773:intron | 55.0% | |
| CCTGGTAGCCTGGATCAACT+AGG | + | chr7.4:30954252-30954271 | None:intergenic | 55.0% | |
| CTCTGGATCGATGACCTGTG+TGG | + | chr7.4:30953324-30953343 | None:intergenic | 55.0% | |
| GGCATGGTCTGATGTAGCAC+GGG | + | chr7.4:30954206-30954225 | None:intergenic | 55.0% | |
| GGTCGAACTCCGGATTACCA+GGG | - | chr7.4:30952963-30952982 | MS.gene92773:intron | 55.0% | |
| GTGCTCCTTCTCAAGGTCTC+AGG | - | chr7.4:30952889-30952908 | MS.gene92773:intron | 55.0% | |
| TACCACCAAGCTAGCCCAAG+TGG | + | chr7.4:30952849-30952868 | None:intergenic | 55.0% | |
| TGGTCGAACTCCGGATTACC+AGG | - | chr7.4:30952962-30952981 | MS.gene92773:intron | 55.0% | |
| ! | AGGGTTTGAAGCTGACCCAG+AGG | - | chr7.4:30955437-30955456 | MS.gene92773:CDS | 55.0% |
| ! | GCTGACCCAGAGGGCATAAA+AGG | - | chr7.4:30955447-30955466 | MS.gene92773:CDS | 55.0% |
| ! | GGGTTTGAAGCTGACCCAGA+GGG | - | chr7.4:30955438-30955457 | MS.gene92773:CDS | 55.0% |
| ! | TGCCAAAGTACCTGGTAGCC+TGG | + | chr7.4:30954262-30954281 | None:intergenic | 55.0% |
| ! | TGGGAGTGTGCTCCTTCTCA+AGG | - | chr7.4:30952882-30952901 | MS.gene92773:intron | 55.0% |
| ! | TTCCCTAAGTGAGGGTGTGG+CGG | + | chr7.4:30954995-30955014 | None:intergenic | 55.0% |
| AACAGGTAGGGTGGCCTCGT+AGG | - | chr7.4:30953929-30953948 | MS.gene92773:CDS | 60.0% | |
| ACCCGCCACACCCTCACTTA+GGG | - | chr7.4:30954990-30955009 | MS.gene92773:intron | 60.0% | |
| CCTCCGGTTCCCTGGTAATC+CGG | + | chr7.4:30952975-30952994 | None:intergenic | 60.0% | |
| CGGATTACCAGGGAACCGGA+GGG | - | chr7.4:30952973-30952992 | MS.gene92773:intron | 60.0% | |
| ! | TCCCTAAGTGAGGGTGTGGC+GGG | + | chr7.4:30954994-30955013 | None:intergenic | 60.0% |
| !! | ACCCACTTGGGCTAGCTTGG+TGG | - | chr7.4:30952844-30952863 | MS.gene92773:intron | 60.0% |
| CCGGATTACCAGGGAACCGG+AGG | - | chr7.4:30952972-30952991 | MS.gene92773:intron | 65.0% | |
| GACCCGCCACACCCTCACTT+AGG | - | chr7.4:30954989-30955008 | MS.gene92773:intron | 65.0% | |
| GGCTTAACCCTCCGGTTCCC+TGG | + | chr7.4:30952983-30953002 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.4 | gene | 30952406 | 30955491 | 30952406 | ID=MS.gene92773 |
| chr7.4 | mRNA | 30952406 | 30955491 | 30952406 | ID=MS.gene92773.t1;Parent=MS.gene92773 |
| chr7.4 | exon | 30955377 | 30955491 | 30955377 | ID=MS.gene92773.t1.exon1;Parent=MS.gene92773.t1 |
| chr7.4 | CDS | 30955377 | 30955491 | 30955377 | ID=cds.MS.gene92773.t1;Parent=MS.gene92773.t1 |
| chr7.4 | exon | 30955232 | 30955292 | 30955232 | ID=MS.gene92773.t1.exon2;Parent=MS.gene92773.t1 |
| chr7.4 | CDS | 30955232 | 30955292 | 30955232 | ID=cds.MS.gene92773.t1;Parent=MS.gene92773.t1 |
| chr7.4 | exon | 30954410 | 30954593 | 30954410 | ID=MS.gene92773.t1.exon3;Parent=MS.gene92773.t1 |
| chr7.4 | CDS | 30954410 | 30954593 | 30954410 | ID=cds.MS.gene92773.t1;Parent=MS.gene92773.t1 |
| chr7.4 | exon | 30953864 | 30953963 | 30953864 | ID=MS.gene92773.t1.exon4;Parent=MS.gene92773.t1 |
| chr7.4 | CDS | 30953864 | 30953963 | 30953864 | ID=cds.MS.gene92773.t1;Parent=MS.gene92773.t1 |
| chr7.4 | exon | 30953627 | 30953727 | 30953627 | ID=MS.gene92773.t1.exon5;Parent=MS.gene92773.t1 |
| chr7.4 | CDS | 30953627 | 30953727 | 30953627 | ID=cds.MS.gene92773.t1;Parent=MS.gene92773.t1 |
| chr7.4 | exon | 30952586 | 30952679 | 30952586 | ID=MS.gene92773.t1.exon6;Parent=MS.gene92773.t1 |
| chr7.4 | CDS | 30952586 | 30952679 | 30952586 | ID=cds.MS.gene92773.t1;Parent=MS.gene92773.t1 |
| chr7.4 | exon | 30952406 | 30952482 | 30952406 | ID=MS.gene92773.t1.exon7;Parent=MS.gene92773.t1 |
| chr7.4 | CDS | 30952406 | 30952482 | 30952406 | ID=cds.MS.gene92773.t1;Parent=MS.gene92773.t1 |
| Gene Sequence |
| Protein sequence |
