Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene96864.t1 | XP_013448875.1 | 97.6 | 255 | 6 | 0 | 1 | 255 | 75 | 329 | 8.70E-138 | 499.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene96864.t1 | O80934 | 79.9 | 254 | 51 | 0 | 2 | 255 | 72 | 325 | 1.9e-117 | 423.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene96864.t1 | I3TAJ6 | 97.6 | 255 | 6 | 0 | 1 | 255 | 75 | 329 | 6.2e-138 | 499.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049284 | MS.gene96864 | 0.811026 | 8.60E-51 | -1.69E-46 |
| MS.gene049346 | MS.gene96864 | 0.827157 | 1.83E-54 | -1.69E-46 |
| MS.gene049351 | MS.gene96864 | 0.873578 | 1.32E-67 | -1.69E-46 |
| MS.gene049356 | MS.gene96864 | 0.809072 | 2.27E-50 | -1.69E-46 |
| MS.gene049427 | MS.gene96864 | 0.806799 | 6.90E-50 | -1.69E-46 |
| MS.gene049491 | MS.gene96864 | 0.850026 | 2.21E-60 | -1.69E-46 |
| MS.gene049599 | MS.gene96864 | -0.822553 | 2.23E-53 | -1.69E-46 |
| MS.gene049614 | MS.gene96864 | 0.804784 | 1.83E-49 | -1.69E-46 |
| MS.gene049661 | MS.gene96864 | 0.90021 | 9.20E-78 | -1.69E-46 |
| MS.gene049662 | MS.gene96864 | 0.898248 | 6.39E-77 | -1.69E-46 |
| MS.gene049681 | MS.gene96864 | 0.809407 | 1.92E-50 | -1.69E-46 |
| MS.gene049758 | MS.gene96864 | 0.897231 | 1.72E-76 | -1.69E-46 |
| MS.gene049910 | MS.gene96864 | 0.807025 | 6.18E-50 | -1.69E-46 |
| MS.gene050076 | MS.gene96864 | 0.879922 | 8.39E-70 | -1.69E-46 |
| MS.gene050099 | MS.gene96864 | 0.829972 | 3.82E-55 | -1.69E-46 |
| MS.gene050128 | MS.gene96864 | 0.851604 | 7.96E-61 | -1.69E-46 |
| MS.gene050215 | MS.gene96864 | 0.805613 | 1.23E-49 | -1.69E-46 |
| MS.gene050301 | MS.gene96864 | 0.89605 | 5.35E-76 | -1.69E-46 |
| MS.gene050397 | MS.gene96864 | 0.900664 | 5.84E-78 | -1.69E-46 |
| MS.gene050404 | MS.gene96864 | 0.812007 | 5.26E-51 | -1.69E-46 |
| MS.gene050406 | MS.gene96864 | 0.825146 | 5.50E-54 | -1.69E-46 |
| MS.gene050432 | MS.gene96864 | 0.874148 | 8.47E-68 | -1.69E-46 |
| MS.gene050464 | MS.gene96864 | 0.855353 | 6.68E-62 | -1.69E-46 |
| MS.gene050529 | MS.gene96864 | 0.872094 | 4.14E-67 | -1.69E-46 |
| MS.gene05053 | MS.gene96864 | 0.800625 | 1.32E-48 | -1.69E-46 |
| MS.gene050558 | MS.gene96864 | 0.80742 | 5.10E-50 | -1.69E-46 |
| MS.gene050670 | MS.gene96864 | 0.828387 | 9.25E-55 | -1.69E-46 |
| MS.gene050767 | MS.gene96864 | 0.840648 | 7.66E-58 | -1.69E-46 |
| MS.gene050770 | MS.gene96864 | 0.842513 | 2.47E-58 | -1.69E-46 |
| MS.gene050971 | MS.gene96864 | 0.802863 | 4.58E-49 | -1.69E-46 |
| MS.gene05101 | MS.gene96864 | 0.896739 | 2.76E-76 | -1.69E-46 |
| MS.gene05105 | MS.gene96864 | 0.840395 | 8.92E-58 | -1.69E-46 |
| MS.gene051255 | MS.gene96864 | 0.826654 | 2.41E-54 | -1.69E-46 |
| MS.gene051471 | MS.gene96864 | 0.862082 | 6.52E-64 | -1.69E-46 |
| MS.gene051582 | MS.gene96864 | 0.817134 | 3.86E-52 | -1.69E-46 |
| MS.gene051662 | MS.gene96864 | 0.809812 | 1.57E-50 | -1.69E-46 |
| MS.gene051663 | MS.gene96864 | 0.835402 | 1.71E-56 | -1.69E-46 |
| MS.gene051666 | MS.gene96864 | 0.807915 | 4.00E-50 | -1.69E-46 |
| MS.gene051692 | MS.gene96864 | 0.84205 | 3.28E-58 | -1.69E-46 |
| MS.gene051860 | MS.gene96864 | 0.871007 | 9.49E-67 | -1.69E-46 |
| MS.gene051877 | MS.gene96864 | 0.881069 | 3.26E-70 | -1.69E-46 |
| MS.gene052011 | MS.gene96864 | -0.810433 | 1.16E-50 | -1.69E-46 |
| MS.gene052077 | MS.gene96864 | 0.822353 | 2.48E-53 | -1.69E-46 |
| MS.gene052078 | MS.gene96864 | 0.893865 | 4.22E-75 | -1.69E-46 |
| MS.gene052178 | MS.gene96864 | 0.872499 | 3.03E-67 | -1.69E-46 |
| MS.gene052188 | MS.gene96864 | 0.849081 | 4.06E-60 | -1.69E-46 |
| MS.gene052207 | MS.gene96864 | 0.826739 | 2.30E-54 | -1.69E-46 |
| MS.gene052253 | MS.gene96864 | 0.86803 | 8.83E-66 | -1.69E-46 |
| MS.gene052287 | MS.gene96864 | 0.847138 | 1.40E-59 | -1.69E-46 |
| MS.gene052290 | MS.gene96864 | 0.826203 | 3.09E-54 | -1.69E-46 |
| MS.gene052310 | MS.gene96864 | 0.87841 | 2.87E-69 | -1.69E-46 |
| MS.gene052322 | MS.gene96864 | 0.856626 | 2.83E-62 | -1.69E-46 |
| MS.gene052326 | MS.gene96864 | 0.873366 | 1.55E-67 | -1.69E-46 |
| MS.gene052340 | MS.gene96864 | 0.865111 | 7.48E-65 | -1.69E-46 |
| MS.gene052421 | MS.gene96864 | 0.81549 | 9.00E-52 | -1.69E-46 |
| MS.gene052481 | MS.gene96864 | 0.829744 | 4.34E-55 | -1.69E-46 |
| MS.gene052484 | MS.gene96864 | 0.801585 | 8.40E-49 | -1.69E-46 |
| MS.gene052485 | MS.gene96864 | 0.847258 | 1.30E-59 | -1.69E-46 |
| MS.gene052917 | MS.gene96864 | -0.837944 | 3.85E-57 | -1.69E-46 |
| MS.gene053103 | MS.gene96864 | 0.852298 | 5.06E-61 | -1.69E-46 |
| MS.gene053104 | MS.gene96864 | 0.818023 | 2.43E-52 | -1.69E-46 |
| MS.gene053209 | MS.gene96864 | 0.878873 | 1.97E-69 | -1.69E-46 |
| MS.gene053322 | MS.gene96864 | 0.83003 | 3.69E-55 | -1.69E-46 |
| MS.gene053557 | MS.gene96864 | 0.857291 | 1.80E-62 | -1.69E-46 |
| MS.gene053813 | MS.gene96864 | 0.816185 | 6.30E-52 | -1.69E-46 |
| MS.gene053836 | MS.gene96864 | 0.890899 | 6.49E-74 | -1.69E-46 |
| MS.gene053928 | MS.gene96864 | 0.801603 | 8.33E-49 | -1.69E-46 |
| MS.gene053971 | MS.gene96864 | 0.806201 | 9.23E-50 | -1.69E-46 |
| MS.gene054010 | MS.gene96864 | 0.844525 | 7.16E-59 | -1.69E-46 |
| MS.gene054011 | MS.gene96864 | 0.865644 | 5.09E-65 | -1.69E-46 |
| MS.gene054012 | MS.gene96864 | 0.85983 | 3.15E-63 | -1.69E-46 |
| MS.gene054013 | MS.gene96864 | 0.856095 | 4.05E-62 | -1.69E-46 |
| MS.gene054123 | MS.gene96864 | 0.83599 | 1.22E-56 | -1.69E-46 |
| MS.gene054214 | MS.gene96864 | 0.822847 | 1.90E-53 | -1.69E-46 |
| MS.gene054349 | MS.gene96864 | 0.80615 | 9.46E-50 | -1.69E-46 |
| MS.gene054376 | MS.gene96864 | 0.845223 | 4.64E-59 | -1.69E-46 |
| MS.gene054473 | MS.gene96864 | 0.849342 | 3.44E-60 | -1.69E-46 |
| MS.gene05455 | MS.gene96864 | 0.841064 | 5.96E-58 | -1.69E-46 |
| MS.gene054618 | MS.gene96864 | 0.812075 | 5.09E-51 | -1.69E-46 |
| MS.gene054802 | MS.gene96864 | 0.846261 | 2.43E-59 | -1.69E-46 |
| MS.gene054803 | MS.gene96864 | 0.843886 | 1.06E-58 | -1.69E-46 |
| MS.gene054804 | MS.gene96864 | 0.846686 | 1.86E-59 | -1.69E-46 |
| MS.gene054955 | MS.gene96864 | 0.825687 | 4.09E-54 | -1.69E-46 |
| MS.gene054983 | MS.gene96864 | 0.817285 | 3.57E-52 | -1.69E-46 |
| MS.gene05505 | MS.gene96864 | 0.811788 | 5.87E-51 | -1.69E-46 |
| MS.gene055116 | MS.gene96864 | 0.883906 | 3.02E-71 | -1.69E-46 |
| MS.gene055254 | MS.gene96864 | 0.836464 | 9.22E-57 | -1.69E-46 |
| MS.gene055277 | MS.gene96864 | 0.940488 | 2.14E-100 | -1.69E-46 |
| MS.gene055390 | MS.gene96864 | 0.867681 | 1.14E-65 | -1.69E-46 |
| MS.gene055422 | MS.gene96864 | 0.897726 | 1.06E-76 | -1.69E-46 |
| MS.gene055428 | MS.gene96864 | 0.914357 | 2.11E-84 | -1.69E-46 |
| MS.gene055604 | MS.gene96864 | 0.846305 | 2.36E-59 | -1.69E-46 |
| MS.gene055712 | MS.gene96864 | 0.815071 | 1.12E-51 | -1.69E-46 |
| MS.gene055896 | MS.gene96864 | 0.809623 | 1.73E-50 | -1.69E-46 |
| MS.gene05592 | MS.gene96864 | 0.80695 | 6.41E-50 | -1.69E-46 |
| MS.gene056191 | MS.gene96864 | 0.891763 | 2.95E-74 | -1.69E-46 |
| MS.gene056314 | MS.gene96864 | 0.810106 | 1.36E-50 | -1.69E-46 |
| MS.gene056407 | MS.gene96864 | 0.857123 | 2.02E-62 | -1.69E-46 |
| MS.gene056410 | MS.gene96864 | 0.864078 | 1.58E-64 | -1.69E-46 |
| MS.gene056452 | MS.gene96864 | 0.813947 | 1.98E-51 | -1.69E-46 |
| MS.gene056511 | MS.gene96864 | 0.80789 | 4.05E-50 | -1.69E-46 |
| MS.gene056609 | MS.gene96864 | 0.828709 | 7.73E-55 | -1.69E-46 |
| MS.gene056612 | MS.gene96864 | 0.861335 | 1.10E-63 | -1.69E-46 |
| MS.gene056796 | MS.gene96864 | 0.833545 | 5.01E-56 | -1.69E-46 |
| MS.gene056899 | MS.gene96864 | -0.811939 | 5.45E-51 | -1.69E-46 |
| MS.gene056902 | MS.gene96864 | 0.832585 | 8.69E-56 | -1.69E-46 |
| MS.gene056931 | MS.gene96864 | 0.821287 | 4.38E-53 | -1.69E-46 |
| MS.gene056933 | MS.gene96864 | 0.820468 | 6.75E-53 | -1.69E-46 |
| MS.gene056935 | MS.gene96864 | 0.813399 | 2.61E-51 | -1.69E-46 |
| MS.gene05702 | MS.gene96864 | 0.883397 | 4.64E-71 | -1.69E-46 |
| MS.gene057121 | MS.gene96864 | 0.825442 | 4.68E-54 | -1.69E-46 |
| MS.gene057123 | MS.gene96864 | 0.855105 | 7.89E-62 | -1.69E-46 |
| MS.gene057129 | MS.gene96864 | 0.816985 | 4.17E-52 | -1.69E-46 |
| MS.gene057146 | MS.gene96864 | 0.81833 | 2.07E-52 | -1.69E-46 |
| MS.gene057245 | MS.gene96864 | 0.842541 | 2.43E-58 | -1.69E-46 |
| MS.gene057295 | MS.gene96864 | 0.859994 | 2.81E-63 | -1.69E-46 |
| MS.gene057330 | MS.gene96864 | 0.819044 | 1.43E-52 | -1.69E-46 |
| MS.gene05733 | MS.gene96864 | 0.880511 | 5.17E-70 | -1.69E-46 |
| MS.gene057439 | MS.gene96864 | 0.82541 | 4.76E-54 | -1.69E-46 |
| MS.gene057448 | MS.gene96864 | 0.825642 | 4.19E-54 | -1.69E-46 |
| MS.gene057449 | MS.gene96864 | 0.817925 | 2.56E-52 | -1.69E-46 |
| MS.gene057450 | MS.gene96864 | 0.830117 | 3.52E-55 | -1.69E-46 |
| MS.gene057749 | MS.gene96864 | 0.842873 | 1.98E-58 | -1.69E-46 |
| MS.gene057779 | MS.gene96864 | 0.85946 | 4.07E-63 | -1.69E-46 |
| MS.gene057796 | MS.gene96864 | 0.819838 | 9.41E-53 | -1.69E-46 |
| MS.gene057823 | MS.gene96864 | 0.843918 | 1.04E-58 | -1.69E-46 |
| MS.gene058002 | MS.gene96864 | 0.886612 | 2.94E-72 | -1.69E-46 |
| MS.gene058006 | MS.gene96864 | 0.806719 | 7.18E-50 | -1.69E-46 |
| MS.gene058082 | MS.gene96864 | 0.825518 | 4.49E-54 | -1.69E-46 |
| MS.gene05811 | MS.gene96864 | 0.901483 | 2.56E-78 | -1.69E-46 |
| MS.gene058233 | MS.gene96864 | 0.841623 | 4.25E-58 | -1.69E-46 |
| MS.gene058293 | MS.gene96864 | 0.865225 | 6.89E-65 | -1.69E-46 |
| MS.gene058365 | MS.gene96864 | 0.817104 | 3.92E-52 | -1.69E-46 |
| MS.gene058660 | MS.gene96864 | 0.902279 | 1.14E-78 | -1.69E-46 |
| MS.gene058787 | MS.gene96864 | 0.844853 | 5.84E-59 | -1.69E-46 |
| MS.gene058845 | MS.gene96864 | 0.829981 | 3.80E-55 | -1.69E-46 |
| MS.gene058928 | MS.gene96864 | 0.85842 | 8.34E-63 | -1.69E-46 |
| MS.gene058993 | MS.gene96864 | 0.801568 | 8.47E-49 | -1.69E-46 |
| MS.gene058995 | MS.gene96864 | 0.828752 | 7.55E-55 | -1.69E-46 |
| MS.gene05907 | MS.gene96864 | 0.892242 | 1.90E-74 | -1.69E-46 |
| MS.gene059141 | MS.gene96864 | 0.804157 | 2.47E-49 | -1.69E-46 |
| MS.gene059285 | MS.gene96864 | 0.821805 | 3.32E-53 | -1.69E-46 |
| MS.gene059294 | MS.gene96864 | 0.874112 | 8.71E-68 | -1.69E-46 |
| MS.gene059326 | MS.gene96864 | 0.842672 | 2.24E-58 | -1.69E-46 |
| MS.gene059342 | MS.gene96864 | 0.8094 | 1.93E-50 | -1.69E-46 |
| MS.gene059366 | MS.gene96864 | 0.802721 | 4.90E-49 | -1.69E-46 |
| MS.gene059420 | MS.gene96864 | 0.826411 | 2.75E-54 | -1.69E-46 |
| MS.gene059518 | MS.gene96864 | 0.881133 | 3.09E-70 | -1.69E-46 |
| MS.gene059536 | MS.gene96864 | 0.840435 | 8.71E-58 | -1.69E-46 |
| MS.gene059597 | MS.gene96864 | 0.890339 | 1.08E-73 | -1.69E-46 |
| MS.gene05959 | MS.gene96864 | 0.810255 | 1.26E-50 | -1.69E-46 |
| MS.gene059676 | MS.gene96864 | 0.851272 | 9.89E-61 | -1.69E-46 |
| MS.gene059688 | MS.gene96864 | 0.886203 | 4.20E-72 | -1.69E-46 |
| MS.gene059692 | MS.gene96864 | 0.890719 | 7.64E-74 | -1.69E-46 |
| MS.gene059695 | MS.gene96864 | 0.887293 | 1.62E-72 | -1.69E-46 |
| MS.gene059708 | MS.gene96864 | 0.818065 | 2.38E-52 | -1.69E-46 |
| MS.gene059711 | MS.gene96864 | 0.812726 | 3.67E-51 | -1.69E-46 |
| MS.gene059807 | MS.gene96864 | 0.818937 | 1.51E-52 | -1.69E-46 |
| MS.gene05984 | MS.gene96864 | 0.883598 | 3.92E-71 | -1.69E-46 |
| MS.gene059894 | MS.gene96864 | 0.878568 | 2.53E-69 | -1.69E-46 |
| MS.gene059960 | MS.gene96864 | 0.821893 | 3.17E-53 | -1.69E-46 |
| MS.gene059974 | MS.gene96864 | 0.847157 | 1.38E-59 | -1.69E-46 |
| MS.gene060005 | MS.gene96864 | 0.846494 | 2.10E-59 | -1.69E-46 |
| MS.gene06037 | MS.gene96864 | 0.914747 | 1.33E-84 | -1.69E-46 |
| MS.gene060403 | MS.gene96864 | 0.859362 | 4.36E-63 | -1.69E-46 |
| MS.gene060476 | MS.gene96864 | 0.831928 | 1.26E-55 | -1.69E-46 |
| MS.gene060495 | MS.gene96864 | 0.808299 | 3.32E-50 | -1.69E-46 |
| MS.gene060559 | MS.gene96864 | 0.820781 | 5.72E-53 | -1.69E-46 |
| MS.gene060804 | MS.gene96864 | 0.856642 | 2.80E-62 | -1.69E-46 |
| MS.gene060818 | MS.gene96864 | 0.816044 | 6.77E-52 | -1.69E-46 |
| MS.gene060837 | MS.gene96864 | 0.826507 | 2.61E-54 | -1.69E-46 |
| MS.gene06090 | MS.gene96864 | 0.81157 | 6.55E-51 | -1.69E-46 |
| MS.gene060986 | MS.gene96864 | 0.813709 | 2.23E-51 | -1.69E-46 |
| MS.gene061041 | MS.gene96864 | 0.819599 | 1.07E-52 | -1.69E-46 |
| MS.gene061049 | MS.gene96864 | 0.90174 | 1.97E-78 | -1.69E-46 |
| MS.gene061051 | MS.gene96864 | -0.843857 | 1.08E-58 | -1.69E-46 |
| MS.gene061154 | MS.gene96864 | 0.817877 | 2.63E-52 | -1.69E-46 |
| MS.gene061200 | MS.gene96864 | 0.82773 | 1.33E-54 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene96864.t1 | MTR_7g062140 | 97.647 | 255 | 6 | 0 | 1 | 255 | 75 | 329 | 0.0 | 513 |
| MS.gene96864.t1 | MTR_4g021815 | 79.608 | 255 | 52 | 0 | 1 | 255 | 1 | 255 | 8.95e-156 | 433 |
| MS.gene96864.t1 | MTR_8g010700 | 30.263 | 228 | 121 | 8 | 42 | 248 | 108 | 318 | 4.03e-22 | 93.6 |
| MS.gene96864.t1 | MTR_4g068970 | 36.458 | 96 | 57 | 2 | 107 | 198 | 183 | 278 | 4.40e-13 | 68.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene96864.t1 | AT2G37660 | 81.452 | 248 | 46 | 0 | 8 | 255 | 78 | 325 | 6.99e-155 | 434 |
| MS.gene96864.t1 | AT5G02240 | 77.419 | 248 | 56 | 0 | 8 | 255 | 6 | 253 | 1.27e-142 | 400 |
| MS.gene96864.t1 | AT4G31530 | 33.051 | 236 | 119 | 8 | 35 | 248 | 100 | 318 | 8.75e-23 | 95.5 |
| MS.gene96864.t1 | AT4G31530 | 32.877 | 219 | 109 | 7 | 35 | 232 | 100 | 301 | 9.03e-21 | 90.1 |
| MS.gene96864.t1 | AT2G34460 | 30.588 | 255 | 139 | 11 | 9 | 251 | 49 | 277 | 3.49e-18 | 82.0 |
| MS.gene96864.t1 | AT3G18890 | 36.458 | 96 | 57 | 2 | 107 | 198 | 183 | 278 | 1.70e-12 | 67.4 |
Find 62 sgRNAs with CRISPR-Local
Find 220 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCACCAACAAAGGACTTTA+AGG | 0.161530 | 7.3:+43160209 | MS.gene96864:CDS |
| GAGCCTAATGGTACCTGTTC+AGG | 0.280550 | 7.3:-43158940 | None:intergenic |
| AAGAGTACTGTGCTTGTTAC+TGG | 0.291951 | 7.3:+43157052 | MS.gene96864:CDS |
| TAACCATCCTTTGAACAGTT+TGG | 0.300060 | 7.3:+43159381 | MS.gene96864:CDS |
| TCAATTCAAGGCATTTGATT+TGG | 0.316577 | 7.3:+43160164 | MS.gene96864:CDS |
| GATTGTGTTAGTAGGGTCTA+TGG | 0.317597 | 7.3:+43159345 | MS.gene96864:CDS |
| AACCATCCTTTGAACAGTTT+GGG | 0.329707 | 7.3:+43159382 | MS.gene96864:CDS |
| GAAGAAAGCAAGCAGAAAAT+TGG | 0.340025 | 7.3:+43158745 | MS.gene96864:CDS |
| GCATCTATACCTTGAATTGC+AGG | 0.353717 | 7.3:-43158820 | None:intergenic |
| AAGAAAGGCTGAACAATATC+TGG | 0.358271 | 7.3:+43159527 | MS.gene96864:CDS |
| TTTGGGTGATGGGAATATAT+TGG | 0.358986 | 7.3:+43159399 | MS.gene96864:CDS |
| GTATTCCGTATACAATTATA+AGG | 0.373066 | 7.3:+43159559 | MS.gene96864:CDS |
| GTGTACCTTATAATTGTATA+CGG | 0.387173 | 7.3:-43159564 | None:intergenic |
| GTAAAGCAGATTGTGTTAGT+AGG | 0.387562 | 7.3:+43159337 | MS.gene96864:CDS |
| CTTTGAACAGTTTGGGTGAT+GGG | 0.397272 | 7.3:+43159389 | MS.gene96864:CDS |
| GGTATCCGAGAACTCGTCAT+AGG | 0.398344 | 7.3:+43159733 | MS.gene96864:CDS |
| CCTTCCCTATGACGAGTTCT+CGG | 0.402259 | 7.3:-43159738 | None:intergenic |
| AAAGCCTTAAAGTCCTTTGT+TGG | 0.407444 | 7.3:-43160213 | None:intergenic |
| AGTCTTGTTCCTGCAATTCA+AGG | 0.415414 | 7.3:+43158811 | MS.gene96864:CDS |
| GTTGGTGAACCTGTTCCCTC+AGG | 0.424555 | 7.3:-43160195 | None:intergenic |
| ATTGTAGGTTTGGAAAAGAA+AGG | 0.432611 | 7.3:+43159512 | MS.gene96864:intron |
| TGTTGCAGAAGTCTGTATTC+AGG | 0.433542 | 7.3:+43159807 | MS.gene96864:CDS |
| CCTCTTGCGACGTATTCGTT+TGG | 0.435742 | 7.3:-43158709 | None:intergenic |
| AATTGCAGGAACAAGACTTT+CGG | 0.441069 | 7.3:-43158806 | None:intergenic |
| GCATCAAAACCTGAGGGAAC+AGG | 0.441936 | 7.3:+43160186 | MS.gene96864:CDS |
| ACTGGTGCTGCTGGTCGTAC+AGG | 0.446496 | 7.3:+43157070 | MS.gene96864:CDS |
| CCTTTGAACAGTTTGGGTGA+TGG | 0.492670 | 7.3:+43159388 | MS.gene96864:CDS |
| GTGCTTGTTACTGGTGCTGC+TGG | 0.493811 | 7.3:+43157061 | MS.gene96864:CDS |
| AGCCTAATGGTACCTGTTCA+GGG | 0.501280 | 7.3:-43158939 | None:intergenic |
| AGACGGTGCATACCCTGAAC+AGG | 0.502612 | 7.3:+43158927 | MS.gene96864:CDS |
| CTAAATTGAGTCAGGGCTGG+TGG | 0.503589 | 7.3:+43159691 | MS.gene96864:intron |
| AACTGTTCAAAGGATGGTTA+AGG | 0.503693 | 7.3:-43159378 | None:intergenic |
| TCTAGCTATGGTTCTGATGT+CGG | 0.517693 | 7.3:-43159779 | None:intergenic |
| ACATGAACAGCTAAGGCTGC+TGG | 0.517860 | 7.3:+43159313 | MS.gene96864:intron |
| TCAGTGGTACTCCACTAGTA+AGG | 0.519176 | 7.3:-43158852 | None:intergenic |
| ATTGTGTTAGTAGGGTCTAT+GGG | 0.532454 | 7.3:+43159346 | MS.gene96864:CDS |
| ATACAGACTTCTGCAACATC+AGG | 0.535402 | 7.3:-43159802 | None:intergenic |
| GTTTACTAGGTTGACTGGAT+CGG | 0.535946 | 7.3:+43159183 | MS.gene96864:intron |
| GAACAATATCTGGCTGACTC+TGG | 0.541428 | 7.3:+43159537 | MS.gene96864:CDS |
| TAAAGCAGATTGTGTTAGTA+GGG | 0.541706 | 7.3:+43159338 | MS.gene96864:CDS |
| CCTTGAGTTGGATCGAACCC+AGG | 0.550851 | 7.3:-43158880 | None:intergenic |
| GGAGTACCACTGATGAAACC+TGG | 0.555099 | 7.3:+43158862 | MS.gene96864:CDS |
| CCAAACGAATACGTCGCAAG+AGG | 0.560213 | 7.3:+43158709 | MS.gene96864:CDS |
| ACCGTCTTCAAAATAGAACT+CGG | 0.571351 | 7.3:-43158911 | None:intergenic |
| CACCCAAACTGTTCAAAGGA+TGG | 0.577560 | 7.3:-43159384 | None:intergenic |
| TGCAACATCAGGTCTAGCTA+TGG | 0.582809 | 7.3:-43159791 | None:intergenic |
| CCTGGGTTCGATCCAACTCA+AGG | 0.593549 | 7.3:+43158880 | MS.gene96864:CDS |
| GTATCCGAGAACTCGTCATA+GGG | 0.593785 | 7.3:+43159734 | MS.gene96864:CDS |
| CCATCACCCAAACTGTTCAA+AGG | 0.597247 | 7.3:-43159388 | None:intergenic |
| GCTCTCATAATCCTTACTAG+TGG | 0.601737 | 7.3:+43158841 | MS.gene96864:CDS |
| TGATTTGGCATCAAAACCTG+AGG | 0.602928 | 7.3:+43160179 | MS.gene96864:CDS |
| GGGAACAGGTTCACCAACAA+AGG | 0.603238 | 7.3:+43160200 | MS.gene96864:CDS |
| CCGTCTTCAAAATAGAACTC+GGG | 0.615847 | 7.3:-43158910 | None:intergenic |
| TGGTGGTTTGCAAGACAAAG+AGG | 0.615970 | 7.3:+43159708 | MS.gene96864:CDS |
| CCGAGAACTCGTCATAGGGA+AGG | 0.618903 | 7.3:+43159738 | MS.gene96864:CDS |
| CAAACGAATACGTCGCAAGA+GGG | 0.623491 | 7.3:+43158710 | MS.gene96864:CDS |
| GATTTGGCATCAAAACCTGA+GGG | 0.627143 | 7.3:+43160180 | MS.gene96864:CDS |
| GGTGGTTTGCAAGACAAAGA+GGG | 0.640822 | 7.3:+43159709 | MS.gene96864:CDS |
| GTGTTAGTAGGGTCTATGGG+TGG | 0.647322 | 7.3:+43159349 | MS.gene96864:CDS |
| GAGTACCACTGATGAAACCT+GGG | 0.654450 | 7.3:+43158863 | MS.gene96864:CDS |
| TCGAACCCAGGTTTCATCAG+TGG | 0.657522 | 7.3:-43158868 | None:intergenic |
| GGTTTGCAAGACAAAGAGGG+AGG | 0.721811 | 7.3:+43159712 | MS.gene96864:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TACTAAAATATGAATAAAAA+AGG | - | chr7.3:43159157-43159176 | None:intergenic | 10.0% |
| !! | TATATTACATCTTAAAATTT+GGG | - | chr7.3:43157918-43157937 | None:intergenic | 10.0% |
| !! | TTTATAAAAAATTAAAAGAG+AGG | + | chr7.3:43158686-43158705 | MS.gene96864:CDS | 10.0% |
| !! | AATTAAGATTGTTAAAATTG+AGG | + | chr7.3:43157492-43157511 | MS.gene96864:intron | 15.0% |
| !! | ATGATACTATCTTAAAATTT+AGG | - | chr7.3:43157756-43157775 | None:intergenic | 15.0% |
| !! | CTATATTACATCTTAAAATT+TGG | - | chr7.3:43157919-43157938 | None:intergenic | 15.0% |
| !! | TACATATTCAATATAATGTT+GGG | - | chr7.3:43157470-43157489 | None:intergenic | 15.0% |
| !! | TCATTTGTTCAAATTATTAT+CGG | - | chr7.3:43157361-43157380 | None:intergenic | 15.0% |
| !! | TTACATATTCAATATAATGT+TGG | - | chr7.3:43157471-43157490 | None:intergenic | 15.0% |
| !!! | AAAATTTCTGATTTTTTGTA+TGG | + | chr7.3:43157600-43157619 | MS.gene96864:intron | 15.0% |
| !!! | AAATTTCTGATTTTTTGTAT+GGG | + | chr7.3:43157601-43157620 | MS.gene96864:intron | 15.0% |
| !!! | AGTAATATGAGTTTTAATTA+AGG | + | chr7.3:43157246-43157265 | MS.gene96864:intron | 15.0% |
| !!! | TTAAAATTGAGGTTTAATTT+AGG | + | chr7.3:43157503-43157522 | MS.gene96864:intron | 15.0% |
| !!! | TTTAGTAATTTTTGTTTACT+AGG | + | chr7.3:43159170-43159189 | MS.gene96864:intron | 15.0% |
| !! | AAAATTAAGATTTCTGACTT+AGG | + | chr7.3:43157547-43157566 | MS.gene96864:intron | 20.0% |
| !! | AAATATAGGAATATAAATGC+AGG | + | chr7.3:43157205-43157224 | MS.gene96864:intron | 20.0% |
| !! | AAATTAAGATTTCTGACTTA+GGG | + | chr7.3:43157548-43157567 | MS.gene96864:intron | 20.0% |
| !! | AATATAGGAATATAAATGCA+GGG | + | chr7.3:43157206-43157225 | MS.gene96864:intron | 20.0% |
| !! | GAAAACTTGTAAAAACAATT+GGG | - | chr7.3:43158979-43158998 | None:intergenic | 20.0% |
| !! | TAAGCAACAATATAAGAAAA+TGG | - | chr7.3:43160082-43160101 | None:intergenic | 20.0% |
| !! | TACTATCTTAAAATTTAGGT+TGG | - | chr7.3:43157752-43157771 | None:intergenic | 20.0% |
| !! | TGTTAAACAAATTCAATCAA+GGG | - | chr7.3:43160123-43160142 | None:intergenic | 20.0% |
| !! | TTAGAATTATTTATGAAGCA+CGG | + | chr7.3:43157288-43157307 | MS.gene96864:intron | 20.0% |
| !!! | AATTGTTTTTACAAGTTTTC+CGG | + | chr7.3:43158979-43158998 | MS.gene96864:intron | 20.0% |
| !!! | TACGAAATTTTGTCAAATAA+TGG | - | chr7.3:43159934-43159953 | None:intergenic | 20.0% |
| ! | AATTAAGATTTCTGACTTAG+GGG | + | chr7.3:43157549-43157568 | MS.gene96864:intron | 25.0% |
| ! | ACTGAAATGTGTGAAAATAT+AGG | + | chr7.3:43157191-43157210 | MS.gene96864:intron | 25.0% |
| ! | ATGAATCATAATCTACCTTT+CGG | - | chr7.3:43158467-43158486 | None:intergenic | 25.0% |
| ! | CTATAACAATGTTATATTGC+TGG | - | chr7.3:43160010-43160029 | None:intergenic | 25.0% |
| ! | CTGACTCAATTTAGAAAAAT+GGG | - | chr7.3:43159685-43159704 | None:intergenic | 25.0% |
| ! | CTGTTAAACAAATTCAATCA+AGG | - | chr7.3:43160124-43160143 | None:intergenic | 25.0% |
| ! | GAAATCAGAAAGTGATAAAA+AGG | - | chr7.3:43158626-43158645 | None:intergenic | 25.0% |
| ! | GATCTATGATTATGTAGAAA+AGG | - | chr7.3:43159245-43159264 | None:intergenic | 25.0% |
| ! | GGAAAACTTGTAAAAACAAT+TGG | - | chr7.3:43158980-43158999 | None:intergenic | 25.0% |
| ! | GTATTCCGTATACAATTATA+AGG | + | chr7.3:43159559-43159578 | MS.gene96864:CDS | 25.0% |
| ! | GTGTACCTTATAATTGTATA+CGG | - | chr7.3:43159567-43159586 | None:intergenic | 25.0% |
| ! | TAGTATACATTTCCAATTAG+AGG | - | chr7.3:43158258-43158277 | None:intergenic | 25.0% |
| ! | TATACAATTATAAGGTACAC+CGG | + | chr7.3:43159567-43159586 | MS.gene96864:intron | 25.0% |
| !! | CATTTTTCTAAATTGAGTCA+GGG | + | chr7.3:43159684-43159703 | MS.gene96864:intron | 25.0% |
| !! | CTTGATTGAATTTGTTTAAC+AGG | + | chr7.3:43160122-43160141 | MS.gene96864:intron | 25.0% |
| !! | TGATGAAAATTTGTTCAAAC+CGG | - | chr7.3:43158373-43158392 | None:intergenic | 25.0% |
| !!! | ATTGTTTTTACAAGTTTTCC+GGG | + | chr7.3:43158980-43158999 | MS.gene96864:intron | 25.0% |
| !!! | ATTTGTTGTTAATGACACAA+TGG | + | chr7.3:43158148-43158167 | MS.gene96864:intron | 25.0% |
| !!! | GTATGATTCCTACTTTTATT+TGG | + | chr7.3:43159614-43159633 | MS.gene96864:intron | 25.0% |
| !!! | GTTTTTGTTTGCAATATAGA+AGG | + | chr7.3:43158305-43158324 | MS.gene96864:intron | 25.0% |
| !!! | TATCTTAAAATTTAGGTTGG+AGG | - | chr7.3:43157749-43157768 | None:intergenic | 25.0% |
| AAAGGTTGGATCATATAATC+GGG | + | chr7.3:43158417-43158436 | MS.gene96864:intron | 30.0% | |
| ACATAAAAAAACTGTCGTTG+TGG | - | chr7.3:43158033-43158052 | None:intergenic | 30.0% | |
| AGAAAAACATAGTATATGCC+GGG | + | chr7.3:43157975-43157994 | MS.gene96864:intron | 30.0% | |
| ATTGTAGGTTTGGAAAAGAA+AGG | + | chr7.3:43159512-43159531 | MS.gene96864:intron | 30.0% | |
| CAAAGGTTGGATCATATAAT+CGG | + | chr7.3:43158416-43158435 | MS.gene96864:intron | 30.0% | |
| CACTTTCTGATTTCTTAATC+TGG | + | chr7.3:43158632-43158651 | MS.gene96864:intron | 30.0% | |
| CAGAAAAACATAGTATATGC+CGG | + | chr7.3:43157974-43157993 | MS.gene96864:intron | 30.0% | |
| CAGAAAAATCAAATAGATGC+TGG | + | chr7.3:43159207-43159226 | MS.gene96864:CDS | 30.0% | |
| CAGTAAATTTACAGTTACAG+AGG | + | chr7.3:43158204-43158223 | MS.gene96864:intron | 30.0% | |
| CATACTGCTATACATATCTT+TGG | - | chr7.3:43158533-43158552 | None:intergenic | 30.0% | |
| CATATGGGAAATGTATTATG+CGG | - | chr7.3:43159110-43159129 | None:intergenic | 30.0% | |
| CCTGACTCAATTTAGAAAAA+TGG | - | chr7.3:43159686-43159705 | None:intergenic | 30.0% | |
| CGTCAAAATGAGTTTATAGT+GGG | + | chr7.3:43157680-43157699 | MS.gene96864:intron | 30.0% | |
| GAAGAAAGATTCATAGATTG+TGG | - | chr7.3:43158497-43158516 | None:intergenic | 30.0% | |
| GCAACAATATAAGAAAATGG+TGG | - | chr7.3:43160079-43160098 | None:intergenic | 30.0% | |
| GTAATTGAATCCTACAAAAC+CGG | - | chr7.3:43157727-43157746 | None:intergenic | 30.0% | |
| GTTAGATGCCAAATAAAAGT+AGG | - | chr7.3:43159625-43159644 | None:intergenic | 30.0% | |
| TAAAGCAGATTGTGTTAGTA+GGG | + | chr7.3:43159338-43159357 | MS.gene96864:CDS | 30.0% | |
| TAAGATTCTCACATGAGATT+AGG | + | chr7.3:43157657-43157676 | MS.gene96864:intron | 30.0% | |
| TAGTTGACAGTAGTCAAAAT+AGG | + | chr7.3:43158588-43158607 | MS.gene96864:intron | 30.0% | |
| TCAACTTAAGCATGACATAT+GGG | - | chr7.3:43159125-43159144 | None:intergenic | 30.0% | |
| TGAATCATAATCTACCTTTC+GGG | - | chr7.3:43158466-43158485 | None:intergenic | 30.0% | |
| TGATGAGAAAAATGCAAGTT+CGG | + | chr7.3:43159466-43159485 | MS.gene96864:intron | 30.0% | |
| TTGTTCAGTGTAATAGAAAC+CGG | - | chr7.3:43159589-43159608 | None:intergenic | 30.0% | |
| TTTATGTACATGAACAGCTA+AGG | + | chr7.3:43159306-43159325 | MS.gene96864:intron | 30.0% | |
| ! | AGAGAGAGAGAAAGAATTTT+TGG | + | chr7.3:43157121-43157140 | MS.gene96864:intron | 30.0% |
| ! | TCAATTCAAGGCATTTGATT+TGG | + | chr7.3:43160164-43160183 | MS.gene96864:CDS | 30.0% |
| ! | TGTTGCTTAACTATGTGATT+TGG | + | chr7.3:43160093-43160112 | MS.gene96864:intron | 30.0% |
| ! | TTAACAGGCACTAAATTTTG+AGG | + | chr7.3:43160137-43160156 | MS.gene96864:intron | 30.0% |
| ! | TTTAATTGCTGTTACTTCTC+AGG | + | chr7.3:43158655-43158674 | MS.gene96864:intron | 30.0% |
| !! | AAAATGGTGGAATTGTGTTT+TGG | - | chr7.3:43160066-43160085 | None:intergenic | 30.0% |
| !! | ACATCTTAAAATTTGGGTTG+AGG | - | chr7.3:43157912-43157931 | None:intergenic | 30.0% |
| !! | ACTTTTATTTGGCATCTAAC+TGG | + | chr7.3:43159625-43159644 | MS.gene96864:intron | 30.0% |
| !! | CCATTTTTCTAAATTGAGTC+AGG | + | chr7.3:43159683-43159702 | MS.gene96864:intron | 30.0% |
| !! | TTTCGTATTGATTGTAGGTT+TGG | + | chr7.3:43159502-43159521 | MS.gene96864:intron | 30.0% |
| !! | TTTTTGTTTACTAGGTTGAC+TGG | + | chr7.3:43159178-43159197 | MS.gene96864:intron | 30.0% |
| !!! | GTTGTTTTCGTATTGATTGT+AGG | + | chr7.3:43159497-43159516 | MS.gene96864:intron | 30.0% |
| !!! | TTTTTAAGTAGCATTCAGAC+CGG | + | chr7.3:43158351-43158370 | MS.gene96864:intron | 30.0% |
| AAAGCCTTAAAGTCCTTTGT+TGG | - | chr7.3:43160216-43160235 | None:intergenic | 35.0% | |
| AAATGTATTATGCGGCTGTT+TGG | - | chr7.3:43159102-43159121 | None:intergenic | 35.0% | |
| AACCATCCTTTGAACAGTTT+GGG | + | chr7.3:43159382-43159401 | MS.gene96864:CDS | 35.0% | |
| AACTGTTCAAAGGATGGTTA+AGG | - | chr7.3:43159381-43159400 | None:intergenic | 35.0% | |
| AAGAAAGGCTGAACAATATC+TGG | + | chr7.3:43159527-43159546 | MS.gene96864:CDS | 35.0% | |
| AATTGCAGGAACAAGACTTT+CGG | - | chr7.3:43158809-43158828 | None:intergenic | 35.0% | |
| ACAAAAACCTCTGTATGTGT+AGG | - | chr7.3:43158293-43158312 | None:intergenic | 35.0% | |
| ACCGTCTTCAAAATAGAACT+CGG | - | chr7.3:43158914-43158933 | None:intergenic | 35.0% | |
| ATCTGTGTAGTTTCAAAGGT+TGG | + | chr7.3:43158403-43158422 | MS.gene96864:intron | 35.0% | |
| ATTGTGTTAGTAGGGTCTAT+GGG | + | chr7.3:43159346-43159365 | MS.gene96864:CDS | 35.0% | |
| CCTTCCTAAACCAAAAACTT+AGG | + | chr7.3:43157943-43157962 | MS.gene96864:intron | 35.0% | |
| GAAGAAAGCAAGCAGAAAAT+TGG | + | chr7.3:43158745-43158764 | MS.gene96864:CDS | 35.0% | |
| GAGTCACATATTACTATGCA+AGG | + | chr7.3:43157864-43157883 | MS.gene96864:intron | 35.0% | |
| GCGTCAAAATGAGTTTATAG+TGG | + | chr7.3:43157679-43157698 | MS.gene96864:intron | 35.0% | |
| GTAAAGCAGATTGTGTTAGT+AGG | + | chr7.3:43159337-43159356 | MS.gene96864:CDS | 35.0% | |
| GTCAACTTAAGCATGACATA+TGG | - | chr7.3:43159126-43159145 | None:intergenic | 35.0% | |
| TAACCATCCTTTGAACAGTT+TGG | + | chr7.3:43159381-43159400 | MS.gene96864:CDS | 35.0% | |
| TATGGGTTCTATTAGTGACT+TGG | + | chr7.3:43157618-43157637 | MS.gene96864:intron | 35.0% | |
| TCAAAAACGAGTAGTGATCT+GGG | - | chr7.3:43160244-43160263 | None:intergenic | 35.0% | |
| TGTTTCCTTCAACAAAAGTC+TGG | + | chr7.3:43159436-43159455 | MS.gene96864:intron | 35.0% | |
| TTCACCAACAAAGGACTTTA+AGG | + | chr7.3:43160209-43160228 | MS.gene96864:CDS | 35.0% | |
| TTGTGGTTTAAATTGCATCC+CGG | - | chr7.3:43158016-43158035 | None:intergenic | 35.0% | |
| ! | CAAAATGAGTTTATAGTGGG+AGG | + | chr7.3:43157683-43157702 | MS.gene96864:intron | 35.0% |
| ! | CAAATTTTCATCACATTGCG+AGG | + | chr7.3:43158380-43158399 | MS.gene96864:intron | 35.0% |
| ! | TAGATGCTATTTGACAAACC+TGG | + | chr7.3:43160027-43160046 | MS.gene96864:intron | 35.0% |
| ! | TGTTTGCAGACCTAAGTTTT+TGG | - | chr7.3:43157956-43157975 | None:intergenic | 35.0% |
| ! | TTGTACCAGACTTTTGTTGA+AGG | - | chr7.3:43159444-43159463 | None:intergenic | 35.0% |
| !! | GCTGCAGATGATGTTTTTAT+TGG | + | chr7.3:43158769-43158788 | MS.gene96864:CDS | 35.0% |
| !! | TTTGGGTGATGGGAATATAT+TGG | + | chr7.3:43159399-43159418 | MS.gene96864:CDS | 35.0% |
| !!! | CAGACCTAAGTTTTTGGTTT+AGG | - | chr7.3:43157950-43157969 | None:intergenic | 35.0% |
| !!! | CCTAAGTTTTTGGTTTAGGA+AGG | - | chr7.3:43157946-43157965 | None:intergenic | 35.0% |
| !!! | CGACAGTTTTTTTATGTCTG+TGG | + | chr7.3:43158036-43158055 | MS.gene96864:intron | 35.0% |
| ATACAGACTTCTGCAACATC+AGG | - | chr7.3:43159805-43159824 | None:intergenic | 40.0% | |
| CAAAACCTCTCTCAAACATG+TGG | + | chr7.3:43159057-43159076 | MS.gene96864:intron | 40.0% | |
| CCGTCTTCAAAATAGAACTC+GGG | - | chr7.3:43158913-43158932 | None:intergenic | 40.0% | |
| CTAAGAACCTACACATACAG+AGG | + | chr7.3:43158283-43158302 | MS.gene96864:intron | 40.0% | |
| CTAATTTCGATAAGCTCTCC+CGG | - | chr7.3:43159001-43159020 | None:intergenic | 40.0% | |
| CTCTGTATGTGTAGGTTCTT+AGG | - | chr7.3:43158285-43158304 | None:intergenic | 40.0% | |
| CTTTGAACAGTTTGGGTGAT+GGG | + | chr7.3:43159389-43159408 | MS.gene96864:CDS | 40.0% | |
| GAGGATCTGTGTAGTTTCAA+AGG | + | chr7.3:43158399-43158418 | MS.gene96864:intron | 40.0% | |
| GATTGTGTTAGTAGGGTCTA+TGG | + | chr7.3:43159345-43159364 | MS.gene96864:CDS | 40.0% | |
| GATTTGGCATCAAAACCTGA+GGG | + | chr7.3:43160180-43160199 | MS.gene96864:CDS | 40.0% | |
| GCAGGGTTTGTAGACTTTAT+TGG | + | chr7.3:43157223-43157242 | MS.gene96864:intron | 40.0% | |
| GCATCTATACCTTGAATTGC+AGG | - | chr7.3:43158823-43158842 | None:intergenic | 40.0% | |
| GCTCTCATAATCCTTACTAG+TGG | + | chr7.3:43158841-43158860 | MS.gene96864:CDS | 40.0% | |
| TATAATGTTGGGACACTCCT+CGG | - | chr7.3:43157459-43157478 | None:intergenic | 40.0% | |
| TCTATCCAAACAGAGCCTAA+TGG | - | chr7.3:43158955-43158974 | None:intergenic | 40.0% | |
| TGCTACACACCACACAAAAT+CGG | - | chr7.3:43157421-43157440 | None:intergenic | 40.0% | |
| TGTGGTTTAAATTGCATCCC+GGG | - | chr7.3:43158015-43158034 | None:intergenic | 40.0% | |
| TGTTGCAGAAGTCTGTATTC+AGG | + | chr7.3:43159807-43159826 | MS.gene96864:CDS | 40.0% | |
| TTCTTACCAACTTACCCGAA+AGG | + | chr7.3:43158449-43158468 | MS.gene96864:intron | 40.0% | |
| TTTCTAAATTGAGTCAGGGC+TGG | + | chr7.3:43159688-43159707 | MS.gene96864:intron | 40.0% | |
| TTTGGTAGAGATAAAGAGCC+AGG | - | chr7.3:43160048-43160067 | None:intergenic | 40.0% | |
| ! | AATCTACCTTTCGGGTAAGT+TGG | - | chr7.3:43158458-43158477 | None:intergenic | 40.0% |
| ! | GGTAATTAGCGGTTTGTTCA+AGG | + | chr7.3:43159898-43159917 | MS.gene96864:intron | 40.0% |
| ! | GTCCACATTAGTCTCTCTTT+CGG | + | chr7.3:43158232-43158251 | MS.gene96864:intron | 40.0% |
| ! | GTTTACTAGGTTGACTGGAT+CGG | + | chr7.3:43159183-43159202 | MS.gene96864:intron | 40.0% |
| ! | TGATTTGGCATCAAAACCTG+AGG | + | chr7.3:43160179-43160198 | MS.gene96864:CDS | 40.0% |
| !! | AAGAGTACTGTGCTTGTTAC+TGG | + | chr7.3:43157052-43157071 | MS.gene96864:CDS | 40.0% |
| !! | ACAGGCACTAAATTTTGAGG+AGG | + | chr7.3:43160140-43160159 | MS.gene96864:intron | 40.0% |
| !! | AGTCTTGTTCCTGCAATTCA+AGG | + | chr7.3:43158811-43158830 | MS.gene96864:CDS | 40.0% |
| !! | CAAGCTCTAGATGTTGTCTT+GGG | + | chr7.3:43157823-43157842 | MS.gene96864:intron | 40.0% |
| !! | CCCGAGTTCTATTTTGAAGA+CGG | + | chr7.3:43158910-43158929 | MS.gene96864:CDS | 40.0% |
| !! | TCAAGCTCTAGATGTTGTCT+TGG | + | chr7.3:43157822-43157841 | MS.gene96864:intron | 40.0% |
| !! | TCTAGCTATGGTTCTGATGT+CGG | - | chr7.3:43159782-43159801 | None:intergenic | 40.0% |
| !! | TTTTGAGGAGGCTCAATTCA+AGG | + | chr7.3:43160152-43160171 | MS.gene96864:CDS | 40.0% |
| ACATGCCACATGTTTGAGAG+AGG | - | chr7.3:43159065-43159084 | None:intergenic | 45.0% | |
| AGATGTTGTCTTGGGCATGA+GGG | + | chr7.3:43157831-43157850 | MS.gene96864:intron | 45.0% | |
| AGCCTAATGGTACCTGTTCA+GGG | - | chr7.3:43158942-43158961 | None:intergenic | 45.0% | |
| AGGTACCATTAGGCTCTGTT+TGG | + | chr7.3:43158947-43158966 | MS.gene96864:intron | 45.0% | |
| AGTAAGCTCTCTCCAGTCAA+TGG | + | chr7.3:43159867-43159886 | MS.gene96864:intron | 45.0% | |
| CAAACGAATACGTCGCAAGA+GGG | + | chr7.3:43158710-43158729 | MS.gene96864:CDS | 45.0% | |
| CACCCAAACTGTTCAAAGGA+TGG | - | chr7.3:43159387-43159406 | None:intergenic | 45.0% | |
| CATGAATACCAGACACGACA+CGG | + | chr7.3:43157318-43157337 | MS.gene96864:intron | 45.0% | |
| CCATCACCCAAACTGTTCAA+AGG | - | chr7.3:43159391-43159410 | None:intergenic | 45.0% | |
| CCTTTGAACAGTTTGGGTGA+TGG | + | chr7.3:43159388-43159407 | MS.gene96864:CDS | 45.0% | |
| CGGGTTTGAAAAAACAGTCC+CGG | + | chr7.3:43157994-43158013 | MS.gene96864:intron | 45.0% | |
| GACTAATGCGACCTCAATCA+CGG | - | chr7.3:43158080-43158099 | None:intergenic | 45.0% | |
| GAGTACCACTGATGAAACCT+GGG | + | chr7.3:43158863-43158882 | MS.gene96864:CDS | 45.0% | |
| GGGTTTGAAAAAACAGTCCC+GGG | + | chr7.3:43157995-43158014 | MS.gene96864:intron | 45.0% | |
| GTATCCGAGAACTCGTCATA+GGG | + | chr7.3:43159734-43159753 | MS.gene96864:CDS | 45.0% | |
| TACCCTGAACAGGTACCATT+AGG | + | chr7.3:43158937-43158956 | MS.gene96864:intron | 45.0% | |
| TAGATGTTGTCTTGGGCATG+AGG | + | chr7.3:43157830-43157849 | MS.gene96864:intron | 45.0% | |
| TCAGTGGTACTCCACTAGTA+AGG | - | chr7.3:43158855-43158874 | None:intergenic | 45.0% | |
| TCTCTCTTTCGGCCTCTAAT+TGG | + | chr7.3:43158243-43158262 | MS.gene96864:intron | 45.0% | |
| TGCAACATCAGGTCTAGCTA+TGG | - | chr7.3:43159794-43159813 | None:intergenic | 45.0% | |
| TGGTAGATCGCGGTAATTAG+CGG | + | chr7.3:43159887-43159906 | MS.gene96864:intron | 45.0% | |
| TTGAATCCTACAAAACCGGC+TGG | - | chr7.3:43157723-43157742 | None:intergenic | 45.0% | |
| ! | GAACAATATCTGGCTGACTC+TGG | + | chr7.3:43159537-43159556 | MS.gene96864:CDS | 45.0% |
| ! | GGTGGTTTGCAAGACAAAGA+GGG | + | chr7.3:43159709-43159728 | MS.gene96864:CDS | 45.0% |
| ! | TCGGGTCTTTTTCCTTGAGT+TGG | - | chr7.3:43158895-43158914 | None:intergenic | 45.0% |
| ! | TGGTGGTTTGCAAGACAAAG+AGG | + | chr7.3:43159708-43159727 | MS.gene96864:CDS | 45.0% |
| ! | TTTTGTGTGGTGTGTAGCAC+AGG | + | chr7.3:43157422-43157441 | MS.gene96864:intron | 45.0% |
| !!! | CGGGACTGTTTTTTCAAACC+CGG | - | chr7.3:43157996-43158015 | None:intergenic | 45.0% |
| !!! | TGTCGAACACCGATTTTGTG+TGG | + | chr7.3:43157409-43157428 | MS.gene96864:intron | 45.0% |
| !!! | TTAATTTTTTATAAACTAAT+TGG | - | chr7.3:43158681-43158700 | None:intergenic | 5.0% |
| ACATGAACAGCTAAGGCTGC+TGG | + | chr7.3:43159313-43159332 | MS.gene96864:intron | 50.0% | |
| ACCTCAATCACGGTTTGCAG+TGG | - | chr7.3:43158070-43158089 | None:intergenic | 50.0% | |
| CACCTGCTATCGAGTCATTC+AGG | + | chr7.3:43157799-43157818 | MS.gene96864:intron | 50.0% | |
| CCAAACGAATACGTCGCAAG+AGG | + | chr7.3:43158709-43158728 | MS.gene96864:CDS | 50.0% | |
| CCTCAATCACGGTTTGCAGT+GGG | - | chr7.3:43158069-43158088 | None:intergenic | 50.0% | |
| CCTCTTGCGACGTATTCGTT+TGG | - | chr7.3:43158712-43158731 | None:intergenic | 50.0% | |
| CCTTCCCTATGACGAGTTCT+CGG | - | chr7.3:43159741-43159760 | None:intergenic | 50.0% | |
| CTAAATTGAGTCAGGGCTGG+TGG | + | chr7.3:43159691-43159710 | MS.gene96864:intron | 50.0% | |
| CTCCAGTCAATGGTAGATCG+CGG | + | chr7.3:43159877-43159896 | MS.gene96864:intron | 50.0% | |
| GACCTGAATGACTCGATAGC+AGG | - | chr7.3:43157804-43157823 | None:intergenic | 50.0% | |
| GAGCCTAATGGTACCTGTTC+AGG | - | chr7.3:43158943-43158962 | None:intergenic | 50.0% | |
| GCATCAAAACCTGAGGGAAC+AGG | + | chr7.3:43160186-43160205 | MS.gene96864:CDS | 50.0% | |
| GGCCGAAAGAGAGACTAATG+TGG | - | chr7.3:43158237-43158256 | None:intergenic | 50.0% | |
| GGGAACAGGTTCACCAACAA+AGG | + | chr7.3:43160200-43160219 | MS.gene96864:CDS | 50.0% | |
| GGTATCCGAGAACTCGTCAT+AGG | + | chr7.3:43159733-43159752 | MS.gene96864:CDS | 50.0% | |
| GGTTTGCAAGACAAAGAGGG+AGG | + | chr7.3:43159712-43159731 | MS.gene96864:CDS | 50.0% | |
| GTGTTAGTAGGGTCTATGGG+TGG | + | chr7.3:43159349-43159368 | MS.gene96864:CDS | 50.0% | |
| TAACCTATCCCAGATCCGTC+AGG | + | chr7.3:43157775-43157794 | MS.gene96864:intron | 50.0% | |
| TACCGCGATCTACCATTGAC+TGG | - | chr7.3:43159882-43159901 | None:intergenic | 50.0% | |
| TCGAACCCAGGTTTCATCAG+TGG | - | chr7.3:43158871-43158890 | None:intergenic | 50.0% | |
| ! | GGAGTACCACTGATGAAACC+TGG | + | chr7.3:43158862-43158881 | MS.gene96864:CDS | 50.0% |
| AGACGGTGCATACCCTGAAC+AGG | + | chr7.3:43158927-43158946 | MS.gene96864:CDS | 55.0% | |
| ATCAGTGTCCGTGTCGTGTC+TGG | - | chr7.3:43157329-43157348 | None:intergenic | 55.0% | |
| CCCACTGCAAACCGTGATTG+AGG | + | chr7.3:43158066-43158085 | MS.gene96864:intron | 55.0% | |
| CCGAGAACTCGTCATAGGGA+AGG | + | chr7.3:43159738-43159757 | MS.gene96864:CDS | 55.0% | |
| CCTGGGTTCGATCCAACTCA+AGG | + | chr7.3:43158880-43158899 | MS.gene96864:CDS | 55.0% | |
| CTCGATAGCAGGTGACCTGA+CGG | - | chr7.3:43157793-43157812 | None:intergenic | 55.0% | |
| GAATCTCTCGCTCTACCAGC+CGG | + | chr7.3:43157705-43157724 | MS.gene96864:intron | 55.0% | |
| GTTGGGACACTCCTCGGATT+AGG | - | chr7.3:43157453-43157472 | None:intergenic | 55.0% | |
| TGCTGCTGGTCGTACAGGTT+TGG | + | chr7.3:43157075-43157094 | MS.gene96864:intron | 55.0% | |
| ! | GTTGGTGAACCTGTTCCCTC+AGG | - | chr7.3:43160198-43160217 | None:intergenic | 55.0% |
| ! | TGACCTGACGGATCTGGGAT+AGG | - | chr7.3:43157781-43157800 | None:intergenic | 55.0% |
| !! | CCTTGAGTTGGATCGAACCC+AGG | - | chr7.3:43158883-43158902 | None:intergenic | 55.0% |
| !! | GCTCTACCAGCCGGTTTTGT+AGG | + | chr7.3:43157714-43157733 | MS.gene96864:intron | 55.0% |
| !! | GTGCTTGTTACTGGTGCTGC+TGG | + | chr7.3:43157061-43157080 | MS.gene96864:CDS | 55.0% |
| CACAGGACACGCCTAATCCG+AGG | + | chr7.3:43157439-43157458 | MS.gene96864:intron | 60.0% | |
| ! | AGCAGGTGACCTGACGGATC+TGG | - | chr7.3:43157787-43157806 | None:intergenic | 60.0% |
| ! | GCAGGTGACCTGACGGATCT+GGG | - | chr7.3:43157786-43157805 | None:intergenic | 60.0% |
| !! | ACTGGTGCTGCTGGTCGTAC+AGG | + | chr7.3:43157070-43157089 | MS.gene96864:CDS | 60.0% |
| ! | CACGGTTTGCAGTGGGCTCG+TGG | - | chr7.3:43158062-43158081 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.3 | gene | 43157037 | 43160263 | 43157037 | ID=MS.gene96864 |
| chr7.3 | mRNA | 43157037 | 43160263 | 43157037 | ID=MS.gene96864.t1;Parent=MS.gene96864 |
| chr7.3 | exon | 43157037 | 43157091 | 43157037 | ID=MS.gene96864.t1.exon1;Parent=MS.gene96864.t1 |
| chr7.3 | CDS | 43157037 | 43157091 | 43157037 | ID=cds.MS.gene96864.t1;Parent=MS.gene96864.t1 |
| chr7.3 | exon | 43158677 | 43158948 | 43158677 | ID=MS.gene96864.t1.exon2;Parent=MS.gene96864.t1 |
| chr7.3 | CDS | 43158677 | 43158948 | 43158677 | ID=cds.MS.gene96864.t1;Parent=MS.gene96864.t1 |
| chr7.3 | exon | 43159192 | 43159228 | 43159192 | ID=MS.gene96864.t1.exon3;Parent=MS.gene96864.t1 |
| chr7.3 | CDS | 43159192 | 43159228 | 43159192 | ID=cds.MS.gene96864.t1;Parent=MS.gene96864.t1 |
| chr7.3 | exon | 43159323 | 43159420 | 43159323 | ID=MS.gene96864.t1.exon4;Parent=MS.gene96864.t1 |
| chr7.3 | CDS | 43159323 | 43159420 | 43159323 | ID=cds.MS.gene96864.t1;Parent=MS.gene96864.t1 |
| chr7.3 | exon | 43159519 | 43159580 | 43159519 | ID=MS.gene96864.t1.exon5;Parent=MS.gene96864.t1 |
| chr7.3 | CDS | 43159519 | 43159580 | 43159519 | ID=cds.MS.gene96864.t1;Parent=MS.gene96864.t1 |
| chr7.3 | exon | 43159705 | 43159828 | 43159705 | ID=MS.gene96864.t1.exon6;Parent=MS.gene96864.t1 |
| chr7.3 | CDS | 43159705 | 43159828 | 43159705 | ID=cds.MS.gene96864.t1;Parent=MS.gene96864.t1 |
| chr7.3 | exon | 43160144 | 43160263 | 43160144 | ID=MS.gene96864.t1.exon7;Parent=MS.gene96864.t1 |
| chr7.3 | CDS | 43160144 | 43160263 | 43160144 | ID=cds.MS.gene96864.t1;Parent=MS.gene96864.t1 |
| Gene Sequence |
| Protein sequence |
