Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene62645.t1 | XP_003631021.1 | 96.8 | 402 | 5 | 1 | 67 | 468 | 80 | 473 | 1.70E-219 | 771.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene62645.t1 | Q9LXU9 | 39.4 | 350 | 199 | 6 | 104 | 450 | 219 | 558 | 9.0e-65 | 249.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene62645.t1 | G7LCD0 | 96.8 | 402 | 5 | 1 | 67 | 468 | 80 | 473 | 1.2e-219 | 771.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049150 | MS.gene62645 | 0.836817 | 7.49E-57 | -1.69E-46 |
| MS.gene049151 | MS.gene62645 | 0.821453 | 4.01E-53 | -1.69E-46 |
| MS.gene049153 | MS.gene62645 | 0.837252 | 5.80E-57 | -1.69E-46 |
| MS.gene049260 | MS.gene62645 | 0.866654 | 2.43E-65 | -1.69E-46 |
| MS.gene049284 | MS.gene62645 | 0.812072 | 5.10E-51 | -1.69E-46 |
| MS.gene049297 | MS.gene62645 | 0.81445 | 1.53E-51 | -1.69E-46 |
| MS.gene049346 | MS.gene62645 | 0.838558 | 2.68E-57 | -1.69E-46 |
| MS.gene049351 | MS.gene62645 | 0.868328 | 7.09E-66 | -1.69E-46 |
| MS.gene049389 | MS.gene62645 | 0.816237 | 6.13E-52 | -1.69E-46 |
| MS.gene049491 | MS.gene62645 | 0.852319 | 4.99E-61 | -1.69E-46 |
| MS.gene049599 | MS.gene62645 | -0.83189 | 1.29E-55 | -1.69E-46 |
| MS.gene049614 | MS.gene62645 | 0.807984 | 3.87E-50 | -1.69E-46 |
| MS.gene049661 | MS.gene62645 | 0.849044 | 4.16E-60 | -1.69E-46 |
| MS.gene049662 | MS.gene62645 | 0.85623 | 3.70E-62 | -1.69E-46 |
| MS.gene049681 | MS.gene62645 | 0.826576 | 2.51E-54 | -1.69E-46 |
| MS.gene049758 | MS.gene62645 | 0.910772 | 1.29E-82 | -1.69E-46 |
| MS.gene049910 | MS.gene62645 | 0.823686 | 1.21E-53 | -1.69E-46 |
| MS.gene049915 | MS.gene62645 | 0.810818 | 9.54E-51 | -1.69E-46 |
| MS.gene050076 | MS.gene62645 | 0.832094 | 1.15E-55 | -1.69E-46 |
| MS.gene050099 | MS.gene62645 | 0.866714 | 2.33E-65 | -1.69E-46 |
| MS.gene050128 | MS.gene62645 | 0.887615 | 1.22E-72 | -1.69E-46 |
| MS.gene050226 | MS.gene62645 | 0.800131 | 1.66E-48 | -1.69E-46 |
| MS.gene050301 | MS.gene62645 | 0.917556 | 4.60E-86 | -1.69E-46 |
| MS.gene050319 | MS.gene62645 | -0.804198 | 2.42E-49 | -1.69E-46 |
| MS.gene050330 | MS.gene62645 | -0.811218 | 7.81E-51 | -1.69E-46 |
| MS.gene050397 | MS.gene62645 | 0.881655 | 2.00E-70 | -1.69E-46 |
| MS.gene050404 | MS.gene62645 | 0.825249 | 5.20E-54 | -1.69E-46 |
| MS.gene050406 | MS.gene62645 | 0.818694 | 1.71E-52 | -1.69E-46 |
| MS.gene050432 | MS.gene62645 | 0.827397 | 1.60E-54 | -1.69E-46 |
| MS.gene050464 | MS.gene62645 | 0.838327 | 3.07E-57 | -1.69E-46 |
| MS.gene050516 | MS.gene62645 | 0.825118 | 5.58E-54 | -1.69E-46 |
| MS.gene050529 | MS.gene62645 | 0.850695 | 1.44E-60 | -1.69E-46 |
| MS.gene05053 | MS.gene62645 | 0.817014 | 4.11E-52 | -1.69E-46 |
| MS.gene050558 | MS.gene62645 | 0.838572 | 2.66E-57 | -1.69E-46 |
| MS.gene050623 | MS.gene62645 | -0.8001 | 1.69E-48 | -1.69E-46 |
| MS.gene050642 | MS.gene62645 | 0.825381 | 4.84E-54 | -1.69E-46 |
| MS.gene050650 | MS.gene62645 | 0.800407 | 1.46E-48 | -1.69E-46 |
| MS.gene050670 | MS.gene62645 | 0.804204 | 2.42E-49 | -1.69E-46 |
| MS.gene050762 | MS.gene62645 | 0.808331 | 3.26E-50 | -1.69E-46 |
| MS.gene050763 | MS.gene62645 | 0.81106 | 8.46E-51 | -1.69E-46 |
| MS.gene050770 | MS.gene62645 | 0.80153 | 8.62E-49 | -1.69E-46 |
| MS.gene050971 | MS.gene62645 | 0.819291 | 1.25E-52 | -1.69E-46 |
| MS.gene05101 | MS.gene62645 | 0.881614 | 2.07E-70 | -1.69E-46 |
| MS.gene05105 | MS.gene62645 | 0.812026 | 5.22E-51 | -1.69E-46 |
| MS.gene05119 | MS.gene62645 | -0.812953 | 3.27E-51 | -1.69E-46 |
| MS.gene051240 | MS.gene62645 | 0.804556 | 2.04E-49 | -1.69E-46 |
| MS.gene051255 | MS.gene62645 | 0.82938 | 5.32E-55 | -1.69E-46 |
| MS.gene051360 | MS.gene62645 | 0.807125 | 5.89E-50 | -1.69E-46 |
| MS.gene051471 | MS.gene62645 | 0.862899 | 3.65E-64 | -1.69E-46 |
| MS.gene051487 | MS.gene62645 | 0.806246 | 9.03E-50 | -1.69E-46 |
| MS.gene051662 | MS.gene62645 | 0.820505 | 6.62E-53 | -1.69E-46 |
| MS.gene051663 | MS.gene62645 | 0.852222 | 5.32E-61 | -1.69E-46 |
| MS.gene051860 | MS.gene62645 | 0.889906 | 1.59E-73 | -1.69E-46 |
| MS.gene051877 | MS.gene62645 | 0.822656 | 2.11E-53 | -1.69E-46 |
| MS.gene051983 | MS.gene62645 | 0.822536 | 2.25E-53 | -1.69E-46 |
| MS.gene052011 | MS.gene62645 | -0.823309 | 1.48E-53 | -1.69E-46 |
| MS.gene052025 | MS.gene62645 | 0.809328 | 2.00E-50 | -1.69E-46 |
| MS.gene052077 | MS.gene62645 | 0.824278 | 8.80E-54 | -1.69E-46 |
| MS.gene052078 | MS.gene62645 | 0.88203 | 1.47E-70 | -1.69E-46 |
| MS.gene052178 | MS.gene62645 | 0.908341 | 1.90E-81 | -1.69E-46 |
| MS.gene052188 | MS.gene62645 | 0.871429 | 6.88E-67 | -1.69E-46 |
| MS.gene052207 | MS.gene62645 | 0.866511 | 2.70E-65 | -1.69E-46 |
| MS.gene052253 | MS.gene62645 | 0.87113 | 8.64E-67 | -1.69E-46 |
| MS.gene052287 | MS.gene62645 | 0.861296 | 1.13E-63 | -1.69E-46 |
| MS.gene052310 | MS.gene62645 | 0.856176 | 3.84E-62 | -1.69E-46 |
| MS.gene052322 | MS.gene62645 | 0.800923 | 1.15E-48 | -1.69E-46 |
| MS.gene052326 | MS.gene62645 | 0.855275 | 7.03E-62 | -1.69E-46 |
| MS.gene052340 | MS.gene62645 | 0.8805 | 5.22E-70 | -1.69E-46 |
| MS.gene052485 | MS.gene62645 | 0.835392 | 1.72E-56 | -1.69E-46 |
| MS.gene052600 | MS.gene62645 | 0.804103 | 2.54E-49 | -1.69E-46 |
| MS.gene052917 | MS.gene62645 | -0.835222 | 1.90E-56 | -1.69E-46 |
| MS.gene053073 | MS.gene62645 | 0.81448 | 1.51E-51 | -1.69E-46 |
| MS.gene053074 | MS.gene62645 | 0.812005 | 5.27E-51 | -1.69E-46 |
| MS.gene05316 | MS.gene62645 | 0.829651 | 4.57E-55 | -1.69E-46 |
| MS.gene053209 | MS.gene62645 | 0.869993 | 2.04E-66 | -1.69E-46 |
| MS.gene053557 | MS.gene62645 | 0.878248 | 3.27E-69 | -1.69E-46 |
| MS.gene053836 | MS.gene62645 | 0.908377 | 1.83E-81 | -1.69E-46 |
| MS.gene053907 | MS.gene62645 | 0.816895 | 4.37E-52 | -1.69E-46 |
| MS.gene053928 | MS.gene62645 | 0.824826 | 6.54E-54 | -1.69E-46 |
| MS.gene054010 | MS.gene62645 | 0.86693 | 1.99E-65 | -1.69E-46 |
| MS.gene054011 | MS.gene62645 | 0.895725 | 7.29E-76 | -1.69E-46 |
| MS.gene054012 | MS.gene62645 | 0.885506 | 7.67E-72 | -1.69E-46 |
| MS.gene054013 | MS.gene62645 | 0.882572 | 9.31E-71 | -1.69E-46 |
| MS.gene054123 | MS.gene62645 | 0.84034 | 9.22E-58 | -1.69E-46 |
| MS.gene054183 | MS.gene62645 | 0.814352 | 1.61E-51 | -1.69E-46 |
| MS.gene054184 | MS.gene62645 | 0.841894 | 3.60E-58 | -1.69E-46 |
| MS.gene054185 | MS.gene62645 | 0.844536 | 7.11E-59 | -1.69E-46 |
| MS.gene054214 | MS.gene62645 | 0.847706 | 9.76E-60 | -1.69E-46 |
| MS.gene054349 | MS.gene62645 | 0.81742 | 3.33E-52 | -1.69E-46 |
| MS.gene054376 | MS.gene62645 | 0.817595 | 3.04E-52 | -1.69E-46 |
| MS.gene054379 | MS.gene62645 | 0.806694 | 7.26E-50 | -1.69E-46 |
| MS.gene054473 | MS.gene62645 | 0.872045 | 4.30E-67 | -1.69E-46 |
| MS.gene054542 | MS.gene62645 | 0.842024 | 3.33E-58 | -1.69E-46 |
| MS.gene05455 | MS.gene62645 | 0.84808 | 7.70E-60 | -1.69E-46 |
| MS.gene054618 | MS.gene62645 | 0.834958 | 2.22E-56 | -1.69E-46 |
| MS.gene054803 | MS.gene62645 | 0.801847 | 7.42E-49 | -1.69E-46 |
| MS.gene054804 | MS.gene62645 | 0.802322 | 5.93E-49 | -1.69E-46 |
| MS.gene054930 | MS.gene62645 | 0.811305 | 7.48E-51 | -1.69E-46 |
| MS.gene054942 | MS.gene62645 | 0.810099 | 1.36E-50 | -1.69E-46 |
| MS.gene054983 | MS.gene62645 | 0.842546 | 2.42E-58 | -1.69E-46 |
| MS.gene055116 | MS.gene62645 | 0.856906 | 2.34E-62 | -1.69E-46 |
| MS.gene055133 | MS.gene62645 | 0.823777 | 1.15E-53 | -1.69E-46 |
| MS.gene055254 | MS.gene62645 | 0.807703 | 4.44E-50 | -1.69E-46 |
| MS.gene055277 | MS.gene62645 | 0.91292 | 1.12E-83 | -1.69E-46 |
| MS.gene055303 | MS.gene62645 | 0.824959 | 6.08E-54 | -1.69E-46 |
| MS.gene055390 | MS.gene62645 | 0.877144 | 7.95E-69 | -1.69E-46 |
| MS.gene055422 | MS.gene62645 | 0.908244 | 2.11E-81 | -1.69E-46 |
| MS.gene055428 | MS.gene62645 | 0.894314 | 2.77E-75 | -1.69E-46 |
| MS.gene05553 | MS.gene62645 | 0.807135 | 5.86E-50 | -1.69E-46 |
| MS.gene055604 | MS.gene62645 | 0.902947 | 5.76E-79 | -1.69E-46 |
| MS.gene055666 | MS.gene62645 | 0.809456 | 1.88E-50 | -1.69E-46 |
| MS.gene055712 | MS.gene62645 | 0.824626 | 7.29E-54 | -1.69E-46 |
| MS.gene055859 | MS.gene62645 | 0.803052 | 4.19E-49 | -1.69E-46 |
| MS.gene056069 | MS.gene62645 | -0.823226 | 1.55E-53 | -1.69E-46 |
| MS.gene056191 | MS.gene62645 | 0.880232 | 6.51E-70 | -1.69E-46 |
| MS.gene056314 | MS.gene62645 | 0.865499 | 5.65E-65 | -1.69E-46 |
| MS.gene056407 | MS.gene62645 | 0.833402 | 5.45E-56 | -1.69E-46 |
| MS.gene056410 | MS.gene62645 | 0.869279 | 3.49E-66 | -1.69E-46 |
| MS.gene056609 | MS.gene62645 | 0.828529 | 8.55E-55 | -1.69E-46 |
| MS.gene056612 | MS.gene62645 | 0.886014 | 4.94E-72 | -1.69E-46 |
| MS.gene056659 | MS.gene62645 | 0.833855 | 4.20E-56 | -1.69E-46 |
| MS.gene056772 | MS.gene62645 | 0.830627 | 2.64E-55 | -1.69E-46 |
| MS.gene056796 | MS.gene62645 | 0.823812 | 1.13E-53 | -1.69E-46 |
| MS.gene056875 | MS.gene62645 | 0.800355 | 1.50E-48 | -1.69E-46 |
| MS.gene056899 | MS.gene62645 | -0.814876 | 1.23E-51 | -1.69E-46 |
| MS.gene056902 | MS.gene62645 | 0.857928 | 1.17E-62 | -1.69E-46 |
| MS.gene056931 | MS.gene62645 | 0.848051 | 7.84E-60 | -1.69E-46 |
| MS.gene056933 | MS.gene62645 | 0.852426 | 4.65E-61 | -1.69E-46 |
| MS.gene056935 | MS.gene62645 | 0.831487 | 1.62E-55 | -1.69E-46 |
| MS.gene056979 | MS.gene62645 | 0.823288 | 1.50E-53 | -1.69E-46 |
| MS.gene05702 | MS.gene62645 | 0.884919 | 1.27E-71 | -1.69E-46 |
| MS.gene057121 | MS.gene62645 | 0.867457 | 1.35E-65 | -1.69E-46 |
| MS.gene057245 | MS.gene62645 | 0.854011 | 1.63E-61 | -1.69E-46 |
| MS.gene057295 | MS.gene62645 | 0.800965 | 1.13E-48 | -1.69E-46 |
| MS.gene05733 | MS.gene62645 | 0.870769 | 1.14E-66 | -1.69E-46 |
| MS.gene057439 | MS.gene62645 | 0.849393 | 3.33E-60 | -1.69E-46 |
| MS.gene057448 | MS.gene62645 | 0.843043 | 1.79E-58 | -1.69E-46 |
| MS.gene057449 | MS.gene62645 | 0.83638 | 9.68E-57 | -1.69E-46 |
| MS.gene057450 | MS.gene62645 | 0.853257 | 2.69E-61 | -1.69E-46 |
| MS.gene057469 | MS.gene62645 | 0.846277 | 2.40E-59 | -1.69E-46 |
| MS.gene057749 | MS.gene62645 | 0.824337 | 8.52E-54 | -1.69E-46 |
| MS.gene057754 | MS.gene62645 | 0.816237 | 6.13E-52 | -1.69E-46 |
| MS.gene057779 | MS.gene62645 | 0.837905 | 3.95E-57 | -1.69E-46 |
| MS.gene057782 | MS.gene62645 | 0.82539 | 4.81E-54 | -1.69E-46 |
| MS.gene057794 | MS.gene62645 | 0.817183 | 3.76E-52 | -1.69E-46 |
| MS.gene057796 | MS.gene62645 | 0.867867 | 9.97E-66 | -1.69E-46 |
| MS.gene057823 | MS.gene62645 | 0.810818 | 9.54E-51 | -1.69E-46 |
| MS.gene058002 | MS.gene62645 | 0.889058 | 3.40E-73 | -1.69E-46 |
| MS.gene058082 | MS.gene62645 | 0.845417 | 4.12E-59 | -1.69E-46 |
| MS.gene05811 | MS.gene62645 | 0.92318 | 3.73E-89 | -1.69E-46 |
| MS.gene058142 | MS.gene62645 | 0.853946 | 1.71E-61 | -1.69E-46 |
| MS.gene058233 | MS.gene62645 | 0.839556 | 1.48E-57 | -1.69E-46 |
| MS.gene058236 | MS.gene62645 | 0.813057 | 3.10E-51 | -1.69E-46 |
| MS.gene058276 | MS.gene62645 | 0.826221 | 3.06E-54 | -1.69E-46 |
| MS.gene058293 | MS.gene62645 | 0.824756 | 6.79E-54 | -1.69E-46 |
| MS.gene058365 | MS.gene62645 | 0.826473 | 2.66E-54 | -1.69E-46 |
| MS.gene05842 | MS.gene62645 | 0.832982 | 6.93E-56 | -1.69E-46 |
| MS.gene058484 | MS.gene62645 | 0.806809 | 6.87E-50 | -1.69E-46 |
| MS.gene058660 | MS.gene62645 | 0.875742 | 2.42E-68 | -1.69E-46 |
| MS.gene058710 | MS.gene62645 | 0.82474 | 6.85E-54 | -1.69E-46 |
| MS.gene058749 | MS.gene62645 | 0.833108 | 6.44E-56 | -1.69E-46 |
| MS.gene058787 | MS.gene62645 | 0.826293 | 2.94E-54 | -1.69E-46 |
| MS.gene058833 | MS.gene62645 | 0.809453 | 1.88E-50 | -1.69E-46 |
| MS.gene058845 | MS.gene62645 | 0.870245 | 1.69E-66 | -1.69E-46 |
| MS.gene05886 | MS.gene62645 | 0.822237 | 2.64E-53 | -1.69E-46 |
| MS.gene058928 | MS.gene62645 | 0.841392 | 4.89E-58 | -1.69E-46 |
| MS.gene05907 | MS.gene62645 | 0.901633 | 2.20E-78 | -1.69E-46 |
| MS.gene059228 | MS.gene62645 | 0.841517 | 4.53E-58 | -1.69E-46 |
| MS.gene059285 | MS.gene62645 | 0.824602 | 7.38E-54 | -1.69E-46 |
| MS.gene059294 | MS.gene62645 | 0.893594 | 5.44E-75 | -1.69E-46 |
| MS.gene059326 | MS.gene62645 | 0.812225 | 4.72E-51 | -1.69E-46 |
| MS.gene059342 | MS.gene62645 | 0.824508 | 7.77E-54 | -1.69E-46 |
| MS.gene059420 | MS.gene62645 | 0.820917 | 5.32E-53 | -1.69E-46 |
| MS.gene059421 | MS.gene62645 | 0.804394 | 2.21E-49 | -1.69E-46 |
| MS.gene059518 | MS.gene62645 | 0.90084 | 4.89E-78 | -1.69E-46 |
| MS.gene059597 | MS.gene62645 | 0.875389 | 3.20E-68 | -1.69E-46 |
| MS.gene05959 | MS.gene62645 | 0.815287 | 9.99E-52 | -1.69E-46 |
| MS.gene059676 | MS.gene62645 | 0.839075 | 1.97E-57 | -1.69E-46 |
| MS.gene059688 | MS.gene62645 | 0.856351 | 3.41E-62 | -1.69E-46 |
| MS.gene059692 | MS.gene62645 | 0.873832 | 1.08E-67 | -1.69E-46 |
| MS.gene059695 | MS.gene62645 | 0.869453 | 3.06E-66 | -1.69E-46 |
| MS.gene059708 | MS.gene62645 | 0.831979 | 1.23E-55 | -1.69E-46 |
| MS.gene05984 | MS.gene62645 | 0.911345 | 6.76E-83 | -1.69E-46 |
| MS.gene059894 | MS.gene62645 | 0.903624 | 2.86E-79 | -1.69E-46 |
| MS.gene059899 | MS.gene62645 | 0.804757 | 1.85E-49 | -1.69E-46 |
| MS.gene059974 | MS.gene62645 | 0.88284 | 7.43E-71 | -1.69E-46 |
| MS.gene060005 | MS.gene62645 | 0.85418 | 1.46E-61 | -1.69E-46 |
| MS.gene06037 | MS.gene62645 | 0.906812 | 9.95E-81 | -1.69E-46 |
| MS.gene060407 | MS.gene62645 | 0.820397 | 7.01E-53 | -1.69E-46 |
| MS.gene060476 | MS.gene62645 | 0.866932 | 1.99E-65 | -1.69E-46 |
| MS.gene060495 | MS.gene62645 | 0.813886 | 2.04E-51 | -1.69E-46 |
| MS.gene060559 | MS.gene62645 | 0.859545 | 3.84E-63 | -1.69E-46 |
| MS.gene060800 | MS.gene62645 | 0.806207 | 9.20E-50 | -1.69E-46 |
| MS.gene06090 | MS.gene62645 | 0.806918 | 6.51E-50 | -1.69E-46 |
| MS.gene060986 | MS.gene62645 | 0.816684 | 4.87E-52 | -1.69E-46 |
| MS.gene061049 | MS.gene62645 | 0.919203 | 6.03E-87 | -1.69E-46 |
| MS.gene061051 | MS.gene62645 | -0.824469 | 7.94E-54 | -1.69E-46 |
| MS.gene061112 | MS.gene62645 | 0.82009 | 8.24E-53 | -1.69E-46 |
| MS.gene061159 | MS.gene62645 | 0.815102 | 1.10E-51 | -1.69E-46 |
| MS.gene061265 | MS.gene62645 | 0.827507 | 1.51E-54 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene62645.t1 | MTR_8g106210 | 95.494 | 466 | 5 | 3 | 3 | 468 | 24 | 473 | 0.0 | 911 |
| MS.gene62645.t1 | MTR_4g066010 | 34.198 | 424 | 238 | 9 | 57 | 450 | 172 | 584 | 8.74e-74 | 243 |
| MS.gene62645.t1 | MTR_2g098420 | 34.925 | 398 | 230 | 6 | 70 | 443 | 188 | 580 | 5.23e-73 | 242 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene62645.t1 | AT1G12330 | 55.580 | 457 | 147 | 11 | 23 | 449 | 42 | 472 | 6.15e-172 | 493 |
| MS.gene62645.t1 | AT5G12900 | 41.139 | 316 | 179 | 4 | 138 | 450 | 247 | 558 | 1.32e-80 | 260 |
Find 63 sgRNAs with CRISPR-Local
Find 78 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACCAAACATGGTTAGGATTA+TGG | 0.210083 | 4.2:+901113 | MS.gene62645:CDS |
| TTCAGTTTACATGGAAGATA+TGG | 0.260469 | 4.2:+901065 | MS.gene62645:CDS |
| CAACGTTGTACAACATTTCT+TGG | 0.272548 | 4.2:+900504 | MS.gene62645:CDS |
| TTTGTTGTTGCTGAGGTTAT+TGG | 0.282756 | 4.2:-901199 | None:intergenic |
| TATTGTCACACTTTGAAATC+TGG | 0.312009 | 4.2:+900382 | MS.gene62645:CDS |
| TTCAAAAGAATGCTTGTAAT+AGG | 0.330527 | 4.2:+900743 | MS.gene62645:CDS |
| TGCTATGTTGGGTTGGAATA+GGG | 0.335899 | 4.2:+900915 | MS.gene62645:CDS |
| TTGCTATGTTGGGTTGGAAT+AGG | 0.340560 | 4.2:+900914 | MS.gene62645:CDS |
| GCTTCATTCAACATGATTCA+TGG | 0.354899 | 4.2:+900802 | MS.gene62645:CDS |
| TTAAATGTAAGGTTCTTTGC+AGG | 0.355993 | 4.2:+901169 | MS.gene62645:CDS |
| GCTGTTACTGCTGTTGTTGT+TGG | 0.357262 | 4.2:-900113 | None:intergenic |
| CAATGAAGAACAATGGAAAA+TGG | 0.357639 | 4.2:+900234 | MS.gene62645:CDS |
| AATACTGCTACTAATGTTGT+TGG | 0.374603 | 4.2:+900427 | MS.gene62645:CDS |
| ATGGATTTGAAAATCCCATT+TGG | 0.381416 | 4.2:-900160 | None:intergenic |
| TTGTTGCTTCAAAGAGTGTT+TGG | 0.389896 | 4.2:+900968 | MS.gene62645:CDS |
| TTGGTGTTGTTCTTCTACTT+TGG | 0.395204 | 4.2:-899901 | None:intergenic |
| TGTTGGGTTGGAATAGGGCT+TGG | 0.406333 | 4.2:+900920 | MS.gene62645:CDS |
| AAGCTCTTCAAGAAGCTTCA+AGG | 0.420955 | 4.2:+900308 | MS.gene62645:CDS |
| CAACTTTGATTCAGTTTACA+TGG | 0.421670 | 4.2:+901056 | MS.gene62645:CDS |
| GGTTGGTACCAAACATGGTT+AGG | 0.425331 | 4.2:+901106 | MS.gene62645:CDS |
| ACCATAATCCTAACCATGTT+TGG | 0.426702 | 4.2:-901114 | None:intergenic |
| ACTTGATGGGTTTAAGGTGA+TGG | 0.428119 | 4.2:-901240 | None:intergenic |
| ACATGATTCATGGGTTGACT+TGG | 0.437332 | 4.2:+900812 | MS.gene62645:CDS |
| TTTGGAGTTGAAGCACTTGT+TGG | 0.439726 | 4.2:-899920 | None:intergenic |
| CTTTGTTGCAAAGTCCAAAT+GGG | 0.440057 | 4.2:+900146 | MS.gene62645:CDS |
| TGTTTGGATGGTTCATTTGT+TGG | 0.441093 | 4.2:+900984 | MS.gene62645:CDS |
| TAATAGGATATTGAACCCTA+TGG | 0.449841 | 4.2:+900759 | MS.gene62645:CDS |
| GTTAGGATTATGGTTGCTCC+TGG | 0.452810 | 4.2:+901123 | MS.gene62645:CDS |
| TCAGTTTACATGGAAGATAT+GGG | 0.453427 | 4.2:+901066 | MS.gene62645:CDS |
| CTTCATTCAACATGATTCAT+GGG | 0.453738 | 4.2:+900803 | MS.gene62645:CDS |
| CTTGATGGGTTTAAGGTGAT+GGG | 0.456935 | 4.2:-901239 | None:intergenic |
| TTGATATTGATTGGTGTTGG+TGG | 0.458109 | 4.2:-899965 | None:intergenic |
| TCTTTGTTGCAAAGTCCAAA+TGG | 0.458726 | 4.2:+900145 | MS.gene62645:CDS |
| TGATGATTGATATTGTGCTT+TGG | 0.465945 | 4.2:-899938 | None:intergenic |
| AGTGAAATTGTTGCTATGTT+GGG | 0.472103 | 4.2:+900904 | MS.gene62645:CDS |
| TTGTTGATATTGATTGGTGT+TGG | 0.475429 | 4.2:-899968 | None:intergenic |
| GAGTGAAATTGTTGCTATGT+TGG | 0.475944 | 4.2:+900903 | MS.gene62645:CDS |
| CTTGATTCACACCTTTCCAT+AGG | 0.488970 | 4.2:-900775 | None:intergenic |
| TGGTAGTGCTGTTAAATGTA+AGG | 0.493435 | 4.2:+901158 | MS.gene62645:CDS |
| TTTGTTGTTGATGCTGACAT+TGG | 0.496621 | 4.2:-900208 | None:intergenic |
| ACAAAGAAAGCTTGCAGAAG+TGG | 0.497139 | 4.2:-900949 | None:intergenic |
| TCTTGTTAGCTTTGAAACAA+TGG | 0.500929 | 4.2:-900179 | None:intergenic |
| CGTTGTACAACATTTCTTGG+TGG | 0.514695 | 4.2:+900507 | MS.gene62645:CDS |
| TTGATTCACACCTTTCCATA+GGG | 0.520693 | 4.2:-900774 | None:intergenic |
| TTCAAGGTTGGTACCAAACA+TGG | 0.524833 | 4.2:+901101 | MS.gene62645:CDS |
| TGTCTTGTTTGTTGTTGCTG+AGG | 0.529272 | 4.2:-901206 | None:intergenic |
| TGGGTGGGGACAAGTCTTCA+AGG | 0.532792 | 4.2:+901085 | MS.gene62645:CDS |
| AAATTGTTGCTATGTTGGGT+TGG | 0.545805 | 4.2:+900908 | MS.gene62645:CDS |
| TGCTTCAAAGAGTGTTTGGA+TGG | 0.549445 | 4.2:+900972 | MS.gene62645:CDS |
| ATTAAATATGCAGATTCAAG+AGG | 0.551509 | 4.2:+899838 | None:intergenic |
| TCTGAAACTGAACTAGAAGA+TGG | 0.555922 | 4.2:+900022 | MS.gene62645:CDS |
| GTTGTTGTTGGAATGATCAA+AGG | 0.567800 | 4.2:-900101 | None:intergenic |
| CATGATTCATGGGTTGACTT+GGG | 0.593679 | 4.2:+900813 | MS.gene62645:CDS |
| GGATATTGAACCCTATGGAA+AGG | 0.598272 | 4.2:+900764 | MS.gene62645:CDS |
| TTTACATGGAAGATATGGGT+GGG | 0.604216 | 4.2:+901070 | MS.gene62645:CDS |
| TTGTTGTTGGAATGATCAAA+GGG | 0.606933 | 4.2:-900100 | None:intergenic |
| CAAACAACAATGAAGAACAA+TGG | 0.609170 | 4.2:+900227 | MS.gene62645:CDS |
| TTACATGGAAGATATGGGTG+GGG | 0.625227 | 4.2:+901071 | MS.gene62645:CDS |
| TGGGGACAAGTCTTCAAGGT+TGG | 0.629308 | 4.2:+901089 | MS.gene62645:CDS |
| GTTTACATGGAAGATATGGG+TGG | 0.633305 | 4.2:+901069 | MS.gene62645:CDS |
| ACAATGCAACTTAGACACAC+AGG | 0.633999 | 4.2:+900577 | MS.gene62645:CDS |
| TGTTGGAATGATCAAAGGGA+AGG | 0.654140 | 4.2:-900096 | None:intergenic |
| AGCAACAACAAACAAGACAA+AGG | 0.670945 | 4.2:+901210 | MS.gene62645:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAGAGATTTTTATATCATA+AGG | - | chr4.2:900640-900659 | None:intergenic | 15.0% |
| ! | AAGTAAAAAAGCAAACTTCT+TGG | - | chr4.2:900673-900692 | None:intergenic | 25.0% |
| ! | TTCAAAAGAATGCTTGTAAT+AGG | + | chr4.2:900743-900762 | MS.gene62645:CDS | 25.0% |
| !! | CCTTTATCAACTCTAAAAAT+TGG | - | chr4.2:901033-901052 | None:intergenic | 25.0% |
| !!! | AAGAAGTTTGCTTTTTTACT+TGG | + | chr4.2:900672-900691 | MS.gene62645:CDS | 25.0% |
| !!! | CCAATTTTTAGAGTTGATAA+AGG | + | chr4.2:901030-901049 | MS.gene62645:CDS | 25.0% |
| !!! | GTGTTTTTGTTGATATTGAT+TGG | - | chr4.2:899977-899996 | None:intergenic | 25.0% |
| !!! | TTTGAACAAGACATTTTTTG+AGG | + | chr4.2:900702-900721 | MS.gene62645:CDS | 25.0% |
| AATACTGCTACTAATGTTGT+TGG | + | chr4.2:900427-900446 | MS.gene62645:CDS | 30.0% | |
| AGTGAAATTGTTGCTATGTT+GGG | + | chr4.2:900904-900923 | MS.gene62645:CDS | 30.0% | |
| ATGGATTTGAAAATCCCATT+TGG | - | chr4.2:900163-900182 | None:intergenic | 30.0% | |
| CAAACAACAATGAAGAACAA+TGG | + | chr4.2:900227-900246 | MS.gene62645:CDS | 30.0% | |
| CAACTTTGATTCAGTTTACA+TGG | + | chr4.2:901056-901075 | MS.gene62645:CDS | 30.0% | |
| CAATGAAGAACAATGGAAAA+TGG | + | chr4.2:900234-900253 | MS.gene62645:CDS | 30.0% | |
| CTTCATTCAACATGATTCAT+GGG | + | chr4.2:900803-900822 | MS.gene62645:CDS | 30.0% | |
| TAATAGGATATTGAACCCTA+TGG | + | chr4.2:900759-900778 | MS.gene62645:CDS | 30.0% | |
| TCAGTTTACATGGAAGATAT+GGG | + | chr4.2:901066-901085 | MS.gene62645:CDS | 30.0% | |
| TGATGATTGATATTGTGCTT+TGG | - | chr4.2:899941-899960 | None:intergenic | 30.0% | |
| TTAAATGTAAGGTTCTTTGC+AGG | + | chr4.2:901169-901188 | MS.gene62645:CDS | 30.0% | |
| TTCAGTTTACATGGAAGATA+TGG | + | chr4.2:901065-901084 | MS.gene62645:CDS | 30.0% | |
| ! | ACTCTAAAAATTGGCAAACT+TGG | - | chr4.2:901024-901043 | None:intergenic | 30.0% |
| ! | TTGTTGATATTGATTGGTGT+TGG | - | chr4.2:899971-899990 | None:intergenic | 30.0% |
| ! | TTGTTGTTGGAATGATCAAA+GGG | - | chr4.2:900103-900122 | None:intergenic | 30.0% |
| !! | TATTGTCACACTTTGAAATC+TGG | + | chr4.2:900382-900401 | MS.gene62645:CDS | 30.0% |
| !! | TCTTGTTAGCTTTGAAACAA+TGG | - | chr4.2:900182-900201 | None:intergenic | 30.0% |
| !! | TTGAGGATTTTGAGTCAATT+GGG | + | chr4.2:900719-900738 | MS.gene62645:CDS | 30.0% |
| !! | TTTGAGGATTTTGAGTCAAT+TGG | + | chr4.2:900718-900737 | MS.gene62645:CDS | 30.0% |
| !!! | GAACGTTTTTTCTTGTGATT+TGG | - | chr4.2:900004-900023 | None:intergenic | 30.0% |
| AAATTGTTGCTATGTTGGGT+TGG | + | chr4.2:900908-900927 | MS.gene62645:CDS | 35.0% | |
| ACCAAACATGGTTAGGATTA+TGG | + | chr4.2:901113-901132 | MS.gene62645:CDS | 35.0% | |
| ACCATAATCCTAACCATGTT+TGG | - | chr4.2:901117-901136 | None:intergenic | 35.0% | |
| AGCAACAACAAACAAGACAA+AGG | + | chr4.2:901210-901229 | MS.gene62645:CDS | 35.0% | |
| CAACGTTGTACAACATTTCT+TGG | + | chr4.2:900504-900523 | MS.gene62645:CDS | 35.0% | |
| CTACCATAGACATAAAAACC+AGG | - | chr4.2:901144-901163 | None:intergenic | 35.0% | |
| CTTTGTTGCAAAGTCCAAAT+GGG | + | chr4.2:900146-900165 | MS.gene62645:CDS | 35.0% | |
| GAGTGAAATTGTTGCTATGT+TGG | + | chr4.2:900903-900922 | MS.gene62645:CDS | 35.0% | |
| GCTTCATTCAACATGATTCA+TGG | + | chr4.2:900802-900821 | MS.gene62645:CDS | 35.0% | |
| TCTTTGTTGCAAAGTCCAAA+TGG | + | chr4.2:900145-900164 | MS.gene62645:CDS | 35.0% | |
| TGTTTGGATGGTTCATTTGT+TGG | + | chr4.2:900984-901003 | MS.gene62645:CDS | 35.0% | |
| TTGATTCACACCTTTCCATA+GGG | - | chr4.2:900777-900796 | None:intergenic | 35.0% | |
| TTTACATGGAAGATATGGGT+GGG | + | chr4.2:901070-901089 | MS.gene62645:CDS | 35.0% | |
| ! | AAGATTTTGTCACGAGAATG+TGG | - | chr4.2:900073-900092 | None:intergenic | 35.0% |
| ! | AGCTTCATCTCTTTTTCTTG+TGG | - | chr4.2:900293-900312 | None:intergenic | 35.0% |
| ! | GTTGTTGTTGGAATGATCAA+AGG | - | chr4.2:900104-900123 | None:intergenic | 35.0% |
| ! | TCTGAAACTGAACTAGAAGA+TGG | + | chr4.2:900022-900041 | MS.gene62645:CDS | 35.0% |
| ! | TGGTAGTGCTGTTAAATGTA+AGG | + | chr4.2:901158-901177 | MS.gene62645:CDS | 35.0% |
| !! | TTGATATTGATTGGTGTTGG+TGG | - | chr4.2:899968-899987 | None:intergenic | 35.0% |
| !! | TTGGTGTTGTTCTTCTACTT+TGG | - | chr4.2:899904-899923 | None:intergenic | 35.0% |
| !! | TTGTTGCTTCAAAGAGTGTT+TGG | + | chr4.2:900968-900987 | MS.gene62645:CDS | 35.0% |
| !! | TTTGTTGTTGATGCTGACAT+TGG | - | chr4.2:900211-900230 | None:intergenic | 35.0% |
| !! | TTTGTTGTTGCTGAGGTTAT+TGG | - | chr4.2:901202-901221 | None:intergenic | 35.0% |
| AAGCTCTTCAAGAAGCTTCA+AGG | + | chr4.2:900308-900327 | MS.gene62645:CDS | 40.0% | |
| ACAAAGAAAGCTTGCAGAAG+TGG | - | chr4.2:900952-900971 | None:intergenic | 40.0% | |
| ACAATGCAACTTAGACACAC+AGG | + | chr4.2:900577-900596 | MS.gene62645:CDS | 40.0% | |
| CGTTGTACAACATTTCTTGG+TGG | + | chr4.2:900507-900526 | MS.gene62645:CDS | 40.0% | |
| CTTGATTCACACCTTTCCAT+AGG | - | chr4.2:900778-900797 | None:intergenic | 40.0% | |
| GGATATTGAACCCTATGGAA+AGG | + | chr4.2:900764-900783 | MS.gene62645:CDS | 40.0% | |
| GTTTACATGGAAGATATGGG+TGG | + | chr4.2:901069-901088 | MS.gene62645:CDS | 40.0% | |
| TGTTGGAATGATCAAAGGGA+AGG | - | chr4.2:900099-900118 | None:intergenic | 40.0% | |
| TTACATGGAAGATATGGGTG+GGG | + | chr4.2:901071-901090 | MS.gene62645:CDS | 40.0% | |
| ! | ACATGATTCATGGGTTGACT+TGG | + | chr4.2:900812-900831 | MS.gene62645:CDS | 40.0% |
| ! | CATGATTCATGGGTTGACTT+GGG | + | chr4.2:900813-900832 | MS.gene62645:CDS | 40.0% |
| ! | TTGGCTTCTGTTTTCACTGT+TGG | - | chr4.2:899885-899904 | None:intergenic | 40.0% |
| ! | TTTGGAGTTGAAGCACTTGT+TGG | - | chr4.2:899923-899942 | None:intergenic | 40.0% |
| !! | GCTCCTGGTTTTTATGTCTA+TGG | + | chr4.2:901138-901157 | MS.gene62645:CDS | 40.0% |
| !! | TGCTATGTTGGGTTGGAATA+GGG | + | chr4.2:900915-900934 | MS.gene62645:CDS | 40.0% |
| !! | TGCTTCAAAGAGTGTTTGGA+TGG | + | chr4.2:900972-900991 | MS.gene62645:CDS | 40.0% |
| !! | TGTCTTGTTTGTTGTTGCTG+AGG | - | chr4.2:901209-901228 | None:intergenic | 40.0% |
| !! | TTCAAGGTTGGTACCAAACA+TGG | + | chr4.2:901101-901120 | MS.gene62645:CDS | 40.0% |
| !! | TTGCTATGTTGGGTTGGAAT+AGG | + | chr4.2:900914-900933 | MS.gene62645:CDS | 40.0% |
| !!! | GGGATGAAGTTTTGAGCAAA+GGG | + | chr4.2:900833-900852 | MS.gene62645:CDS | 40.0% |
| !!! | TGGGATGAAGTTTTGAGCAA+AGG | + | chr4.2:900832-900851 | MS.gene62645:CDS | 40.0% |
| GCTGTTACTGCTGTTGTTGT+TGG | - | chr4.2:900116-900135 | None:intergenic | 45.0% | |
| GTTAGGATTATGGTTGCTCC+TGG | + | chr4.2:901123-901142 | MS.gene62645:CDS | 45.0% | |
| ! | GGTTGGTACCAAACATGGTT+AGG | + | chr4.2:901106-901125 | MS.gene62645:CDS | 45.0% |
| TGGGGACAAGTCTTCAAGGT+TGG | + | chr4.2:901089-901108 | MS.gene62645:CDS | 50.0% | |
| !! | TGTTGGGTTGGAATAGGGCT+TGG | + | chr4.2:900920-900939 | MS.gene62645:CDS | 50.0% |
| TGGGTGGGGACAAGTCTTCA+AGG | + | chr4.2:901085-901104 | MS.gene62645:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.2 | gene | 899845 | 901251 | 899845 | ID=MS.gene62645 |
| chr4.2 | mRNA | 899845 | 901251 | 899845 | ID=MS.gene62645.t1;Parent=MS.gene62645 |
| chr4.2 | exon | 899845 | 901251 | 899845 | ID=MS.gene62645.t1.exon1;Parent=MS.gene62645.t1 |
| chr4.2 | CDS | 899845 | 901251 | 899845 | ID=cds.MS.gene62645.t1;Parent=MS.gene62645.t1 |
| Gene Sequence |
| Protein sequence |
