Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37213.t1 | XP_013451234.1 | 69.2 | 318 | 5 | 1 | 1 | 225 | 61 | 378 | 3.30E-120 | 441 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37213.t1 | Q9M896 | 37.7 | 310 | 103 | 2 | 4 | 223 | 127 | 436 | 1.2e-62 | 241.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37213.t1 | A0A072U692 | 69.2 | 318 | 5 | 1 | 1 | 225 | 61 | 378 | 2.4e-120 | 441.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049134 | MS.gene37213 | -0.801194 | 1.01E-48 | -1.69E-46 |
| MS.gene049150 | MS.gene37213 | 0.821384 | 4.16E-53 | -1.69E-46 |
| MS.gene049153 | MS.gene37213 | 0.81155 | 6.62E-51 | -1.69E-46 |
| MS.gene049195 | MS.gene37213 | 0.837799 | 4.20E-57 | -1.69E-46 |
| MS.gene049233 | MS.gene37213 | 0.800923 | 1.15E-48 | -1.69E-46 |
| MS.gene049260 | MS.gene37213 | 0.817803 | 2.73E-52 | -1.69E-46 |
| MS.gene049297 | MS.gene37213 | 0.833463 | 5.26E-56 | -1.69E-46 |
| MS.gene049346 | MS.gene37213 | 0.851403 | 9.08E-61 | -1.69E-46 |
| MS.gene049351 | MS.gene37213 | 0.809641 | 1.71E-50 | -1.69E-46 |
| MS.gene049599 | MS.gene37213 | -0.817463 | 3.25E-52 | -1.69E-46 |
| MS.gene049758 | MS.gene37213 | 0.870568 | 1.32E-66 | -1.69E-46 |
| MS.gene049910 | MS.gene37213 | 0.837921 | 3.91E-57 | -1.69E-46 |
| MS.gene050076 | MS.gene37213 | 0.816478 | 5.42E-52 | -1.69E-46 |
| MS.gene050226 | MS.gene37213 | 0.81153 | 6.68E-51 | -1.69E-46 |
| MS.gene050227 | MS.gene37213 | 0.820599 | 6.30E-53 | -1.69E-46 |
| MS.gene050228 | MS.gene37213 | 0.811922 | 5.49E-51 | -1.69E-46 |
| MS.gene050301 | MS.gene37213 | 0.870007 | 2.02E-66 | -1.69E-46 |
| MS.gene050319 | MS.gene37213 | -0.814646 | 1.39E-51 | -1.69E-46 |
| MS.gene050330 | MS.gene37213 | -0.820722 | 5.90E-53 | -1.69E-46 |
| MS.gene050397 | MS.gene37213 | 0.803959 | 2.72E-49 | -1.69E-46 |
| MS.gene050432 | MS.gene37213 | 0.80541 | 1.35E-49 | -1.69E-46 |
| MS.gene050516 | MS.gene37213 | 0.811343 | 7.34E-51 | -1.69E-46 |
| MS.gene050558 | MS.gene37213 | 0.859467 | 4.05E-63 | -1.69E-46 |
| MS.gene050560 | MS.gene37213 | 0.823387 | 1.42E-53 | -1.69E-46 |
| MS.gene050642 | MS.gene37213 | 0.804592 | 2.01E-49 | -1.69E-46 |
| MS.gene050787 | MS.gene37213 | 0.881275 | 2.75E-70 | -1.69E-46 |
| MS.gene050820 | MS.gene37213 | 0.832876 | 7.36E-56 | -1.69E-46 |
| MS.gene05101 | MS.gene37213 | 0.820876 | 5.44E-53 | -1.69E-46 |
| MS.gene05119 | MS.gene37213 | -0.849207 | 3.75E-60 | -1.69E-46 |
| MS.gene051582 | MS.gene37213 | 0.826505 | 2.62E-54 | -1.69E-46 |
| MS.gene051663 | MS.gene37213 | 0.819607 | 1.06E-52 | -1.69E-46 |
| MS.gene051860 | MS.gene37213 | 0.870641 | 1.25E-66 | -1.69E-46 |
| MS.gene051877 | MS.gene37213 | 0.814187 | 1.75E-51 | -1.69E-46 |
| MS.gene051983 | MS.gene37213 | 0.810278 | 1.25E-50 | -1.69E-46 |
| MS.gene052011 | MS.gene37213 | -0.824179 | 9.28E-54 | -1.69E-46 |
| MS.gene052025 | MS.gene37213 | 0.817605 | 3.02E-52 | -1.69E-46 |
| MS.gene052078 | MS.gene37213 | 0.815707 | 8.05E-52 | -1.69E-46 |
| MS.gene052207 | MS.gene37213 | 0.863791 | 1.93E-64 | -1.69E-46 |
| MS.gene052253 | MS.gene37213 | 0.837169 | 6.09E-57 | -1.69E-46 |
| MS.gene052287 | MS.gene37213 | 0.815668 | 8.22E-52 | -1.69E-46 |
| MS.gene052326 | MS.gene37213 | 0.808704 | 2.72E-50 | -1.69E-46 |
| MS.gene052340 | MS.gene37213 | 0.802764 | 4.80E-49 | -1.69E-46 |
| MS.gene052917 | MS.gene37213 | -0.803719 | 3.05E-49 | -1.69E-46 |
| MS.gene053184 | MS.gene37213 | 0.803947 | 2.73E-49 | -1.69E-46 |
| MS.gene053209 | MS.gene37213 | 0.801609 | 8.31E-49 | -1.69E-46 |
| MS.gene053332 | MS.gene37213 | 0.808975 | 2.38E-50 | -1.69E-46 |
| MS.gene053836 | MS.gene37213 | 0.910554 | 1.65E-82 | -1.69E-46 |
| MS.gene054011 | MS.gene37213 | 0.821789 | 3.35E-53 | -1.69E-46 |
| MS.gene054012 | MS.gene37213 | 0.807986 | 3.87E-50 | -1.69E-46 |
| MS.gene054183 | MS.gene37213 | 0.826285 | 2.95E-54 | -1.69E-46 |
| MS.gene054468 | MS.gene37213 | 0.803569 | 3.27E-49 | -1.69E-46 |
| MS.gene054473 | MS.gene37213 | 0.99731 | 2.62E-240 | -1.69E-46 |
| MS.gene054542 | MS.gene37213 | 0.828483 | 8.77E-55 | -1.69E-46 |
| MS.gene05455 | MS.gene37213 | 0.802262 | 6.10E-49 | -1.69E-46 |
| MS.gene054618 | MS.gene37213 | 0.804184 | 2.44E-49 | -1.69E-46 |
| MS.gene054667 | MS.gene37213 | 0.817223 | 3.69E-52 | -1.69E-46 |
| MS.gene054930 | MS.gene37213 | 0.830204 | 3.35E-55 | -1.69E-46 |
| MS.gene054942 | MS.gene37213 | 0.839482 | 1.54E-57 | -1.69E-46 |
| MS.gene054983 | MS.gene37213 | 0.877258 | 7.26E-69 | -1.69E-46 |
| MS.gene055116 | MS.gene37213 | 0.811964 | 5.38E-51 | -1.69E-46 |
| MS.gene055277 | MS.gene37213 | 0.844438 | 7.56E-59 | -1.69E-46 |
| MS.gene055303 | MS.gene37213 | 0.83459 | 2.74E-56 | -1.69E-46 |
| MS.gene055356 | MS.gene37213 | 0.838768 | 2.36E-57 | -1.69E-46 |
| MS.gene055358 | MS.gene37213 | 0.853826 | 1.85E-61 | -1.69E-46 |
| MS.gene055390 | MS.gene37213 | 0.837233 | 5.86E-57 | -1.69E-46 |
| MS.gene055422 | MS.gene37213 | 0.85409 | 1.55E-61 | -1.69E-46 |
| MS.gene055428 | MS.gene37213 | 0.890204 | 1.22E-73 | -1.69E-46 |
| MS.gene055604 | MS.gene37213 | 0.839077 | 1.97E-57 | -1.69E-46 |
| MS.gene055712 | MS.gene37213 | 0.815941 | 7.14E-52 | -1.69E-46 |
| MS.gene055859 | MS.gene37213 | 0.807479 | 4.95E-50 | -1.69E-46 |
| MS.gene056069 | MS.gene37213 | -0.824012 | 1.02E-53 | -1.69E-46 |
| MS.gene056191 | MS.gene37213 | 0.814842 | 1.25E-51 | -1.69E-46 |
| MS.gene056407 | MS.gene37213 | 0.812091 | 5.05E-51 | -1.69E-46 |
| MS.gene056612 | MS.gene37213 | 0.836567 | 8.68E-57 | -1.69E-46 |
| MS.gene056723 | MS.gene37213 | 0.802915 | 4.47E-49 | -1.69E-46 |
| MS.gene056772 | MS.gene37213 | 0.809947 | 1.47E-50 | -1.69E-46 |
| MS.gene056875 | MS.gene37213 | 0.823151 | 1.62E-53 | -1.69E-46 |
| MS.gene056931 | MS.gene37213 | 0.801819 | 7.52E-49 | -1.69E-46 |
| MS.gene056933 | MS.gene37213 | 0.808295 | 3.32E-50 | -1.69E-46 |
| MS.gene056979 | MS.gene37213 | 0.800583 | 1.35E-48 | -1.69E-46 |
| MS.gene05702 | MS.gene37213 | 0.834542 | 2.82E-56 | -1.69E-46 |
| MS.gene057121 | MS.gene37213 | 0.866681 | 2.39E-65 | -1.69E-46 |
| MS.gene057245 | MS.gene37213 | 0.857087 | 2.07E-62 | -1.69E-46 |
| MS.gene05733 | MS.gene37213 | 0.807997 | 3.84E-50 | -1.69E-46 |
| MS.gene057439 | MS.gene37213 | 0.81617 | 6.35E-52 | -1.69E-46 |
| MS.gene057450 | MS.gene37213 | 0.804064 | 2.58E-49 | -1.69E-46 |
| MS.gene057469 | MS.gene37213 | 0.868714 | 5.32E-66 | -1.69E-46 |
| MS.gene057639 | MS.gene37213 | 0.809376 | 1.95E-50 | -1.69E-46 |
| MS.gene058002 | MS.gene37213 | 0.871386 | 7.11E-67 | -1.69E-46 |
| MS.gene05811 | MS.gene37213 | 0.866602 | 2.53E-65 | -1.69E-46 |
| MS.gene058142 | MS.gene37213 | 0.821563 | 3.78E-53 | -1.69E-46 |
| MS.gene05842 | MS.gene37213 | 0.809991 | 1.44E-50 | -1.69E-46 |
| MS.gene058660 | MS.gene37213 | 0.82261 | 2.16E-53 | -1.69E-46 |
| MS.gene058710 | MS.gene37213 | 0.834855 | 2.35E-56 | -1.69E-46 |
| MS.gene058739 | MS.gene37213 | 0.809069 | 2.27E-50 | -1.69E-46 |
| MS.gene058749 | MS.gene37213 | 0.83118 | 1.93E-55 | -1.69E-46 |
| MS.gene058845 | MS.gene37213 | 0.80012 | 1.67E-48 | -1.69E-46 |
| MS.gene05886 | MS.gene37213 | 0.826967 | 2.03E-54 | -1.69E-46 |
| MS.gene059033 | MS.gene37213 | -0.804423 | 2.18E-49 | -1.69E-46 |
| MS.gene05907 | MS.gene37213 | 0.857636 | 1.43E-62 | -1.69E-46 |
| MS.gene059285 | MS.gene37213 | 0.814151 | 1.78E-51 | -1.69E-46 |
| MS.gene059420 | MS.gene37213 | 0.825673 | 4.12E-54 | -1.69E-46 |
| MS.gene059518 | MS.gene37213 | 0.836842 | 7.38E-57 | -1.69E-46 |
| MS.gene059597 | MS.gene37213 | 0.823436 | 1.39E-53 | -1.69E-46 |
| MS.gene059688 | MS.gene37213 | 0.800135 | 1.66E-48 | -1.69E-46 |
| MS.gene059692 | MS.gene37213 | 0.805855 | 1.09E-49 | -1.69E-46 |
| MS.gene059695 | MS.gene37213 | 0.801938 | 7.11E-49 | -1.69E-46 |
| MS.gene05984 | MS.gene37213 | 0.864789 | 9.44E-65 | -1.69E-46 |
| MS.gene059894 | MS.gene37213 | 0.828138 | 1.06E-54 | -1.69E-46 |
| MS.gene06037 | MS.gene37213 | 0.853637 | 2.10E-61 | -1.69E-46 |
| MS.gene060476 | MS.gene37213 | 0.808028 | 3.79E-50 | -1.69E-46 |
| MS.gene060559 | MS.gene37213 | 0.823577 | 1.29E-53 | -1.69E-46 |
| MS.gene061049 | MS.gene37213 | 0.868082 | 8.50E-66 | -1.69E-46 |
| MS.gene061114 | MS.gene37213 | -0.828056 | 1.11E-54 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 0 sgRNAs with CRISPR-Local
Find 131 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAATTTTCAAGATTTGTTA+AGG | + | 42363:33177-33196 | None:intergenic | 15.0% |
| !!! | AAACAGTTTTCATAAATTTT+TGG | - | 42363:32026-32045 | MS.gene37213:CDS | 15.0% |
| !!! | AACAGTTTTCATAAATTTTT+GGG | - | 42363:32027-32046 | MS.gene37213:CDS | 15.0% |
| !!! | ACAAATCTTGAAAATTTTAA+AGG | - | 42363:33179-33198 | MS.gene37213:intron | 15.0% |
| !!! | ATTTTTTTGTATTTACACAA+AGG | - | 42363:33690-33709 | MS.gene37213:CDS | 15.0% |
| !!! | GTATTTTTTTTTCTTTTTTC+AGG | - | 42363:32776-32795 | MS.gene37213:intron | 15.0% |
| !!! | GTTTATTATTTACTTTTTGA+GGG | - | 42363:33649-33668 | MS.gene37213:CDS | 15.0% |
| !!! | TGTTTATTATTTACTTTTTG+AGG | - | 42363:33648-33667 | MS.gene37213:CDS | 15.0% |
| !!! | TTTTTTTGTATTTACACAAA+GGG | - | 42363:33691-33710 | MS.gene37213:CDS | 15.0% |
| !! | AAAAAATACATAAGCATGTT+TGG | + | 42363:32765-32784 | None:intergenic | 20.0% |
| ! | AAATGATTAACTAAGAAGGA+TGG | + | 42363:32386-32405 | None:intergenic | 25.0% |
| ! | AAGGAAGAAATGAACTTAAA+TGG | - | 42363:33293-33312 | MS.gene37213:intron | 25.0% |
| ! | ACCATTATTGTTCTATGAAA+AGG | - | 42363:33055-33074 | MS.gene37213:intron | 25.0% |
| ! | ATAACAATGTAACATGCAAA+TGG | - | 42363:31725-31744 | MS.gene37213:intron | 25.0% |
| ! | ATTTAGTCTCAAATTTACTG+TGG | - | 42363:32627-32646 | MS.gene37213:intron | 25.0% |
| ! | CAAATGTCATATATTTCAGA+CGG | - | 42363:32835-32854 | MS.gene37213:intron | 25.0% |
| ! | CATGAAATTATATGTAGATG+AGG | - | 42363:32959-32978 | MS.gene37213:intron | 25.0% |
| ! | CATGTTACATTGTTATAGTA+AGG | + | 42363:31721-31740 | None:intergenic | 25.0% |
| ! | CCATTATTGTTCTATGAAAA+GGG | - | 42363:33056-33075 | MS.gene37213:intron | 25.0% |
| ! | CTAAATTAACCCATCTAAAT+TGG | + | 42363:32153-32172 | None:intergenic | 25.0% |
| ! | TCACTATTATGGTTACAAAA+TGG | - | 42363:33130-33149 | MS.gene37213:intron | 25.0% |
| ! | TGTGAAATGATTAACTAAGA+AGG | + | 42363:32390-32409 | None:intergenic | 25.0% |
| ! | TTTACAATGATTGTGTTCAT+TGG | - | 42363:33486-33505 | MS.gene37213:CDS | 25.0% |
| !! | AATTGAGTTGCATTAAACAA+CGG | + | 42363:31838-31857 | None:intergenic | 25.0% |
| !!! | GTTTTCATAAATTTTTGGGT+TGG | - | 42363:32031-32050 | MS.gene37213:CDS | 25.0% |
| !!! | GTTTTTTTTTTCAAAAGAGC+AGG | - | 42363:31981-32000 | MS.gene37213:CDS | 25.0% |
| !!! | TTAAAGGTGTGACATTTTTT+AGG | - | 42363:33195-33214 | MS.gene37213:intron | 25.0% |
| AAACCAAACATTCACTAAGA+TGG | + | 42363:32467-32486 | None:intergenic | 30.0% | |
| AATCCATCTTAGTGAATGTT+TGG | - | 42363:32461-32480 | MS.gene37213:intron | 30.0% | |
| ATAGCATGTCCATAGTTATT+AGG | + | 42363:33449-33468 | None:intergenic | 30.0% | |
| ATGAAAAAACCTTGATGTCA+CGG | + | 42363:32233-32252 | None:intergenic | 30.0% | |
| ATGGTTACAAAATGGCATTT+AGG | - | 42363:33138-33157 | MS.gene37213:intron | 30.0% | |
| CAAGTTAGAATCAATTCTAG+AGG | + | 42363:32573-32592 | None:intergenic | 30.0% | |
| GATCATTACTTACTTGACTT+AGG | + | 42363:31942-31961 | None:intergenic | 30.0% | |
| GTATTTATGAGAAACATCCT+CGG | + | 42363:32811-32830 | None:intergenic | 30.0% | |
| TAATAACTATGGACATGCTA+TGG | - | 42363:33448-33467 | MS.gene37213:intron | 30.0% | |
| TAGCATGTCCATAGTTATTA+GGG | + | 42363:33448-33467 | None:intergenic | 30.0% | |
| TATGAAAAGGGTAAACTTGT+TGG | - | 42363:33068-33087 | MS.gene37213:intron | 30.0% | |
| TATTTATGAGAAACATCCTC+GGG | + | 42363:32810-32829 | None:intergenic | 30.0% | |
| TCTAACTTGAAGCTAGAATT+CGG | - | 42363:32584-32603 | MS.gene37213:intron | 30.0% | |
| TTCATTTCTTCCTTGCTAAA+TGG | + | 42363:33287-33306 | None:intergenic | 30.0% | |
| TTGTATTTACACAAAGGGTA+GGG | - | 42363:33696-33715 | MS.gene37213:CDS | 30.0% | |
| TTTGTATTTACACAAAGGGT+AGG | - | 42363:33695-33714 | MS.gene37213:CDS | 30.0% | |
| ! | CCCTTTTCATAGAACAATAA+TGG | + | 42363:33059-33078 | None:intergenic | 30.0% |
| ! | GGAAAGAAAATGGTTTTTGT+TGG | - | 42363:31874-31893 | MS.gene37213:intron | 30.0% |
| ! | TGAATGTTTGGTTTCACATT+TGG | - | 42363:32473-32492 | MS.gene37213:intron | 30.0% |
| ! | TGAATTTAAAGTAGCACAAG+AGG | - | 42363:33349-33368 | MS.gene37213:intron | 30.0% |
| ! | TTTTTGTTGGAGATTCTGTT+GGG | - | 42363:31887-31906 | MS.gene37213:intron | 30.0% |
| AAAACTGCATGAAGTTTGGT+AGG | - | 42363:31761-31780 | MS.gene37213:intron | 35.0% | |
| AACTCATTCCATGTATCAAC+TGG | + | 42363:33524-33543 | None:intergenic | 35.0% | |
| AAGAAGGATGGATACAATCA+AGG | + | 42363:32374-32393 | None:intergenic | 35.0% | |
| AATTGGATTCCTCATTCTGA+AGG | - | 42363:31694-31713 | MS.gene37213:intron | 35.0% | |
| ACAGATCTTGCTCACTATTA+TGG | - | 42363:33119-33138 | MS.gene37213:intron | 35.0% | |
| ACCAAGGGTGAAATTGTAAT+CGG | + | 42363:32871-32890 | None:intergenic | 35.0% | |
| ACCATACTTTGTGAGATCAA+AGG | - | 42363:32902-32921 | MS.gene37213:intron | 35.0% | |
| AGAAGGATGGATACAATCAA+GGG | + | 42363:32373-32392 | None:intergenic | 35.0% | |
| AGGGAACAAGGATAAAAACA+AGG | + | 42363:32349-32368 | None:intergenic | 35.0% | |
| ATTATCTAAGAATGCAACCG+TGG | - | 42363:32310-32329 | MS.gene37213:intron | 35.0% | |
| ATTATGTTGTTGAGACCTGA+TGG | - | 42363:33419-33438 | MS.gene37213:intron | 35.0% | |
| CATAAGCATGTTTGGTTATC+TGG | + | 42363:32757-32776 | None:intergenic | 35.0% | |
| CATTACTTACTTGACTTAGG+AGG | + | 42363:31939-31958 | None:intergenic | 35.0% | |
| GAACAAAACTGCATGAAGTT+TGG | - | 42363:31757-31776 | MS.gene37213:intron | 35.0% | |
| GGTTGCATTCTTAGATAATG+CGG | + | 42363:32309-32328 | None:intergenic | 35.0% | |
| GTACAAAGTCACACATCTTA+TGG | - | 42363:33563-33582 | MS.gene37213:CDS | 35.0% | |
| TCAAAGGATGCTGACAAAAA+TGG | - | 42363:32918-32937 | MS.gene37213:intron | 35.0% | |
| TCCTTTGATCTCACAAAGTA+TGG | + | 42363:32906-32925 | None:intergenic | 35.0% | |
| TCTCCATTCTCAAAATGTGA+TGG | + | 42363:33230-33249 | None:intergenic | 35.0% | |
| TGTATTTACACAAAGGGTAG+GGG | - | 42363:33697-33716 | MS.gene37213:CDS | 35.0% | |
| ! | AAAGGATGTGACATCTTTTC+TGG | - | 42363:31670-31689 | MS.gene37213:CDS | 35.0% |
| ! | ATGTTTGGTTTCACATTTGG+AGG | - | 42363:32476-32495 | MS.gene37213:intron | 35.0% |
| ! | GCTTGTTAGAGGAAAGAAAA+TGG | - | 42363:31864-31883 | MS.gene37213:intron | 35.0% |
| ! | GGAGGAAAAATTGATTCTAG+AGG | - | 42363:32497-32516 | MS.gene37213:intron | 35.0% |
| ! | GGTTATCTGGTGTCAAAAAT+TGG | + | 42363:32744-32763 | None:intergenic | 35.0% |
| ! | GTTTTTGTTGGAGATTCTGT+TGG | - | 42363:31886-31905 | MS.gene37213:intron | 35.0% |
| !! | CAATTCTTAGAGCTTGTTAG+AGG | - | 42363:31853-31872 | MS.gene37213:intron | 35.0% |
| !! | CACATTTTGAGAATGGAGAT+TGG | - | 42363:33231-33250 | MS.gene37213:intron | 35.0% |
| !! | GTGACATCTTTTCTGGTAAT+TGG | - | 42363:31677-31696 | MS.gene37213:intron | 35.0% |
| !! | TCTCCATCACATTTTGAGAA+TGG | - | 42363:33224-33243 | MS.gene37213:intron | 35.0% |
| !!! | TTTTCCTCACTGATTTGTGT+TGG | - | 42363:32254-32273 | MS.gene37213:CDS | 35.0% |
| AATGGAGATTGGAACAAAGG+AGG | - | 42363:33242-33261 | MS.gene37213:intron | 40.0% | |
| ATGAGTATCTTCGTTGGAGA+TGG | - | 42363:31791-31810 | MS.gene37213:intron | 40.0% | |
| ATGGAGATTGGAACAAAGGA+GGG | - | 42363:33243-33262 | MS.gene37213:intron | 40.0% | |
| CTTGTTGGATGCAACAAATG+TGG | - | 42363:33083-33102 | MS.gene37213:intron | 40.0% | |
| GACATAGTGATCATTTCAGC+AGG | - | 42363:33017-33036 | MS.gene37213:intron | 40.0% | |
| GAGAATGGAGATTGGAACAA+AGG | - | 42363:33239-33258 | MS.gene37213:intron | 40.0% | |
| GAGGACAAAACCATTTAGCA+AGG | - | 42363:33274-33293 | MS.gene37213:intron | 40.0% | |
| GATGGACACCCTAATAACTA+TGG | - | 42363:33437-33456 | MS.gene37213:intron | 40.0% | |
| GATGGATACAATCAAGGGAA+GGG | + | 42363:32368-32387 | None:intergenic | 40.0% | |
| TAACCCATCTAAATTGGCAC+CGG | + | 42363:32147-32166 | None:intergenic | 40.0% | |
| TAGATGAGGTAGATGAAGCA+TGG | - | 42363:32973-32992 | MS.gene37213:intron | 40.0% | |
| TAGTAAGGTCCTTCAGAATG+AGG | + | 42363:31706-31725 | None:intergenic | 40.0% | |
| TGATCATTTCAGCAGGACAT+TGG | - | 42363:33024-33043 | MS.gene37213:intron | 40.0% | |
| TGGATGCAACAAATGTGGAA+TGG | - | 42363:33088-33107 | MS.gene37213:intron | 40.0% | |
| ! | ATTTCACCCTTGGTAATCTG+TGG | - | 42363:32877-32896 | MS.gene37213:intron | 40.0% |
| ! | TAGTTATTAGGGTGTCCATC+AGG | + | 42363:33437-33456 | None:intergenic | 40.0% |
| ! | TGTGTTCATTGGTGTTTACC+TGG | - | 42363:33497-33516 | MS.gene37213:CDS | 40.0% |
| ! | TTTGGTTTCACATTTGGAGG+AGG | - | 42363:32479-32498 | MS.gene37213:intron | 40.0% |
| !! | CAAGAGGAAGCATCAAAGAA+AGG | - | 42363:33365-33384 | MS.gene37213:intron | 40.0% |
| !!! | AAGGTTTTAAATCGCAGCCA+CGG | + | 42363:32330-32349 | None:intergenic | 40.0% |
| !!! | CATAAATTTTTGGGTTGGCC+TGG | - | 42363:32036-32055 | MS.gene37213:CDS | 40.0% |
| AACCCATCTAAATTGGCACC+GGG | + | 42363:32146-32165 | None:intergenic | 45.0% | |
| AACGGAAGCTCGCATTCATT+TGG | + | 42363:31820-31839 | None:intergenic | 45.0% | |
| ACAAAGGAGGGAATTGTGTG+AGG | - | 42363:33255-33274 | MS.gene37213:intron | 45.0% | |
| ACAATCAAGGGAAGGGAACA+AGG | + | 42363:32361-32380 | None:intergenic | 45.0% | |
| AGATCGAACCTGATAACTCG+AGG | + | 42363:32095-32114 | None:intergenic | 45.0% | |
| AGTCTCAAACCAATACCACC+AGG | + | 42363:32057-32076 | None:intergenic | 45.0% | |
| ATGGTGACCACAGATTACCA+AGG | + | 42363:32887-32906 | None:intergenic | 45.0% | |
| CAACGAAGATACTCATCGTC+CGG | + | 42363:31787-31806 | None:intergenic | 45.0% | |
| GCCGATTACAATTTCACCCT+TGG | - | 42363:32867-32886 | MS.gene37213:intron | 45.0% | |
| GGATGGATACAATCAAGGGA+AGG | + | 42363:32369-32388 | None:intergenic | 45.0% | |
| TGGTGACCACAGATTACCAA+GGG | + | 42363:32886-32905 | None:intergenic | 45.0% | |
| TTCCATGTATCAACTGGTCC+AGG | + | 42363:33518-33537 | None:intergenic | 45.0% | |
| ! | TACCTGGACCAGTTGATACA+TGG | - | 42363:33513-33532 | MS.gene37213:CDS | 45.0% |
| !!! | AAATTTTTGGGTTGGCCTGG+TGG | - | 42363:32039-32058 | MS.gene37213:CDS | 45.0% |
| ACCCATCTAAATTGGCACCG+GGG | + | 42363:32145-32164 | None:intergenic | 50.0% | |
| CGGACGATGAGTATCTTCGT+TGG | - | 42363:31785-31804 | MS.gene37213:intron | 50.0% | |
| CTGCATGAAGTTTGGTAGGC+CGG | - | 42363:31765-31784 | MS.gene37213:intron | 50.0% | |
| GAATCGAACCTGATACCTCG+AGG | + | 42363:32121-32140 | None:intergenic | 50.0% | |
| GCGACCAACACAAATCAGTG+AGG | + | 42363:32261-32280 | None:intergenic | 50.0% | |
| GTATCAGGTTCGATTCTCCC+CGG | - | 42363:32125-32144 | MS.gene37213:CDS | 50.0% | |
| TCGAACCTGATAACTCGAGG+AGG | + | 42363:32092-32111 | None:intergenic | 50.0% | |
| ! | TCCCCGGTGCCAATTTAGAT+GGG | - | 42363:32141-32160 | MS.gene37213:CDS | 50.0% |
| CGACTTGAGCCGTGACATCA+AGG | - | 42363:32221-32240 | MS.gene37213:CDS | 55.0% | |
| GTGCTCCTCCTCGAGTTATC+AGG | - | 42363:32084-32103 | MS.gene37213:CDS | 55.0% | |
| TCGAACCTGATACCTCGAGG+AGG | + | 42363:32118-32137 | None:intergenic | 55.0% | |
| ! | CTCCCCGGTGCCAATTTAGA+TGG | - | 42363:32140-32159 | MS.gene37213:CDS | 55.0% |
| ! | GATCTCCTCCTCGAGGTATC+AGG | - | 42363:32110-32129 | MS.gene37213:CDS | 55.0% |
| !! | TTGGGTTGGCCTGGTGGTAT+TGG | - | 42363:32045-32064 | MS.gene37213:CDS | 55.0% |
| !! | TTTTCAGGCGTCTCAACCCG+AGG | - | 42363:32791-32810 | MS.gene37213:intron | 55.0% |
| CACGGCTCAAGTCGCAGTCA+CGG | + | 42363:32215-32234 | None:intergenic | 60.0% | |
| CAGGTTCGATCTCCTCCTCG+AGG | - | 42363:32103-32122 | MS.gene37213:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| 42363 | gene | 31665 | 33738 | 31665 | ID=MS.gene37213 |
| 42363 | mRNA | 31665 | 33738 | 31665 | ID=MS.gene37213.t1;Parent=MS.gene37213 |
| 42363 | exon | 33455 | 33738 | 33455 | ID=MS.gene37213.t1.exon1;Parent=MS.gene37213.t1 |
| 42363 | CDS | 33455 | 33738 | 33455 | ID=cds.MS.gene37213.t1;Parent=MS.gene37213.t1 |
| 42363 | exon | 31934 | 32326 | 31934 | ID=MS.gene37213.t1.exon2;Parent=MS.gene37213.t1 |
| 42363 | CDS | 31934 | 32326 | 31934 | ID=cds.MS.gene37213.t1;Parent=MS.gene37213.t1 |
| 42363 | exon | 31665 | 31691 | 31665 | ID=MS.gene37213.t1.exon3;Parent=MS.gene37213.t1 |
| 42363 | CDS | 31665 | 31691 | 31665 | ID=cds.MS.gene37213.t1;Parent=MS.gene37213.t1 |
| Gene Sequence |
| Protein sequence |
