AlfalfaGEDB | MS.gene26990

M. sativa cultivar XinJiangDaYe / MS.gene26990

KEGG: K02909
GO: GO:0003674 GO:0003735 GO:0005198 GO:0005575 GO:0005840 GO:0006412 GO:0006518 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009987 GO:0019538 GO:0034641 GO:0034645 GO:0043043 GO:0043170 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0043603 GO:0043604 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0071704 GO:0110165 GO:1901564 GO:1901566 GO:1901576
PFAM: PF01197.21

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene26990.t1	XP_013466135.1	98.5	134	2	0	1	134	1	134	1.60E-71	278.5

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene26990.t1	Q9FWS4	57.5	146	48	3	1	134	1	144	8.4e-40	164.5

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene26990.t1	G8A1R6	98.5	134	2	0	1	134	1	134	1.2e-71	278.5

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene049150	MS.gene26990	0.810561	1.08E-50	-1.69E-46
MS.gene049151	MS.gene26990	0.814418	1.56E-51	-1.69E-46
MS.gene049153	MS.gene26990	0.803035	4.22E-49	-1.69E-46
MS.gene049260	MS.gene26990	0.838515	2.75E-57	-1.69E-46
MS.gene049284	MS.gene26990	0.818933	1.51E-52	-1.69E-46
MS.gene049297	MS.gene26990	0.826918	2.08E-54	-1.69E-46
MS.gene049346	MS.gene26990	0.836105	1.14E-56	-1.69E-46
MS.gene049351	MS.gene26990	0.818513	1.88E-52	-1.69E-46
MS.gene049378	MS.gene26990	0.815044	1.13E-51	-1.69E-46
MS.gene049389	MS.gene26990	0.830258	3.25E-55	-1.69E-46
MS.gene049491	MS.gene26990	0.840662	7.60E-58	-1.69E-46
MS.gene049599	MS.gene26990	-0.863479	2.42E-64	-1.69E-46
MS.gene049661	MS.gene26990	0.827267	1.72E-54	-1.69E-46
MS.gene049662	MS.gene26990	0.835753	1.40E-56	-1.69E-46
MS.gene049758	MS.gene26990	0.936813	9.51E-98	-1.69E-46
MS.gene049910	MS.gene26990	0.841005	6.18E-58	-1.69E-46
MS.gene049915	MS.gene26990	0.857452	1.62E-62	-1.69E-46
MS.gene050076	MS.gene26990	0.841641	4.20E-58	-1.69E-46
MS.gene050099	MS.gene26990	0.838408	2.93E-57	-1.69E-46
MS.gene050128	MS.gene26990	0.890911	6.42E-74	-1.69E-46
MS.gene050226	MS.gene26990	0.811797	5.85E-51	-1.69E-46
MS.gene050227	MS.gene26990	0.813494	2.49E-51	-1.69E-46
MS.gene050301	MS.gene26990	0.912822	1.25E-83	-1.69E-46
MS.gene050330	MS.gene26990	-0.828159	1.05E-54	-1.69E-46
MS.gene050397	MS.gene26990	0.86653	2.67E-65	-1.69E-46
MS.gene050404	MS.gene26990	0.866679	2.39E-65	-1.69E-46
MS.gene050406	MS.gene26990	0.85133	9.52E-61	-1.69E-46
MS.gene050432	MS.gene26990	0.819774	9.73E-53	-1.69E-46
MS.gene050464	MS.gene26990	0.848036	7.91E-60	-1.69E-46
MS.gene050529	MS.gene26990	0.870868	1.05E-66	-1.69E-46
MS.gene050558	MS.gene26990	0.842836	2.03E-58	-1.69E-46
MS.gene050623	MS.gene26990	-0.84656	2.01E-59	-1.69E-46
MS.gene050642	MS.gene26990	0.858971	5.71E-63	-1.69E-46
MS.gene050670	MS.gene26990	0.81143	7.03E-51	-1.69E-46
MS.gene050762	MS.gene26990	0.825196	5.35E-54	-1.69E-46
MS.gene050763	MS.gene26990	0.827079	1.91E-54	-1.69E-46
MS.gene050971	MS.gene26990	0.801814	7.54E-49	-1.69E-46
MS.gene05101	MS.gene26990	0.875239	3.60E-68	-1.69E-46
MS.gene05119	MS.gene26990	-0.850078	2.14E-60	-1.69E-46
MS.gene051471	MS.gene26990	0.879662	1.04E-69	-1.69E-46
MS.gene051535	MS.gene26990	0.817949	2.53E-52	-1.69E-46
MS.gene051582	MS.gene26990	0.811683	6.19E-51	-1.69E-46
MS.gene051662	MS.gene26990	0.858645	7.15E-63	-1.69E-46
MS.gene051663	MS.gene26990	0.866784	2.21E-65	-1.69E-46
MS.gene051860	MS.gene26990	0.863888	1.80E-64	-1.69E-46
MS.gene051983	MS.gene26990	0.854358	1.30E-61	-1.69E-46
MS.gene052025	MS.gene26990	0.811831	5.75E-51	-1.69E-46
MS.gene052077	MS.gene26990	0.869241	3.59E-66	-1.69E-46
MS.gene052078	MS.gene26990	0.885429	8.19E-72	-1.69E-46
MS.gene052176	MS.gene26990	0.804056	2.59E-49	-1.69E-46
MS.gene052178	MS.gene26990	0.904641	9.92E-80	-1.69E-46
MS.gene052188	MS.gene26990	0.88181	1.76E-70	-1.69E-46
MS.gene052207	MS.gene26990	0.825802	3.84E-54	-1.69E-46
MS.gene052253	MS.gene26990	0.838217	3.28E-57	-1.69E-46
MS.gene052290	MS.gene26990	0.831143	1.97E-55	-1.69E-46
MS.gene052302	MS.gene26990	0.803072	4.15E-49	-1.69E-46
MS.gene052309	MS.gene26990	-0.832307	1.02E-55	-1.69E-46
MS.gene052310	MS.gene26990	0.870336	1.58E-66	-1.69E-46
MS.gene052326	MS.gene26990	0.850141	2.06E-60	-1.69E-46
MS.gene052340	MS.gene26990	0.893657	5.13E-75	-1.69E-46
MS.gene052600	MS.gene26990	0.81101	8.67E-51	-1.69E-46
MS.gene052917	MS.gene26990	-0.811458	6.93E-51	-1.69E-46
MS.gene053073	MS.gene26990	0.859464	4.06E-63	-1.69E-46
MS.gene05316	MS.gene26990	0.827665	1.38E-54	-1.69E-46
MS.gene053181	MS.gene26990	0.804248	2.37E-49	-1.69E-46
MS.gene053209	MS.gene26990	0.873217	1.75E-67	-1.69E-46
MS.gene053557	MS.gene26990	0.894319	2.76E-75	-1.69E-46
MS.gene053559	MS.gene26990	0.835955	1.24E-56	-1.69E-46
MS.gene053577	MS.gene26990	0.831502	1.61E-55	-1.69E-46
MS.gene053836	MS.gene26990	0.919749	3.05E-87	-1.69E-46
MS.gene053907	MS.gene26990	0.856439	3.21E-62	-1.69E-46
MS.gene053928	MS.gene26990	0.821604	3.70E-53	-1.69E-46
MS.gene053971	MS.gene26990	0.806899	6.57E-50	-1.69E-46
MS.gene054011	MS.gene26990	0.829783	4.24E-55	-1.69E-46
MS.gene054012	MS.gene26990	0.809536	1.80E-50	-1.69E-46
MS.gene054013	MS.gene26990	0.803308	3.71E-49	-1.69E-46
MS.gene054123	MS.gene26990	0.856443	3.21E-62	-1.69E-46
MS.gene054184	MS.gene26990	0.80699	6.29E-50	-1.69E-46
MS.gene054185	MS.gene26990	0.813978	1.95E-51	-1.69E-46
MS.gene054214	MS.gene26990	0.806201	9.23E-50	-1.69E-46
MS.gene054349	MS.gene26990	0.817776	2.77E-52	-1.69E-46
MS.gene054379	MS.gene26990	0.824453	8.01E-54	-1.69E-46
MS.gene054473	MS.gene26990	0.84984	2.50E-60	-1.69E-46
MS.gene054542	MS.gene26990	0.861833	7.77E-64	-1.69E-46
MS.gene05455	MS.gene26990	0.817956	2.52E-52	-1.69E-46
MS.gene054667	MS.gene26990	0.818168	2.26E-52	-1.69E-46
MS.gene054930	MS.gene26990	0.87375	1.15E-67	-1.69E-46
MS.gene054942	MS.gene26990	0.823304	1.49E-53	-1.69E-46
MS.gene054983	MS.gene26990	0.855481	6.13E-62	-1.69E-46
MS.gene055116	MS.gene26990	0.858907	5.97E-63	-1.69E-46
MS.gene055133	MS.gene26990	0.835522	1.60E-56	-1.69E-46
MS.gene055254	MS.gene26990	0.825062	5.75E-54	-1.69E-46
MS.gene055277	MS.gene26990	0.89118	5.03E-74	-1.69E-46
MS.gene055390	MS.gene26990	0.845071	5.10E-59	-1.69E-46
MS.gene055422	MS.gene26990	0.916818	1.13E-85	-1.69E-46
MS.gene055428	MS.gene26990	0.896464	3.60E-76	-1.69E-46
MS.gene055509	MS.gene26990	0.804036	2.62E-49	-1.69E-46
MS.gene05553	MS.gene26990	0.81893	1.52E-52	-1.69E-46
MS.gene055604	MS.gene26990	0.846931	1.59E-59	-1.69E-46
MS.gene055712	MS.gene26990	0.846168	2.57E-59	-1.69E-46
MS.gene055859	MS.gene26990	0.836488	9.09E-57	-1.69E-46
MS.gene056069	MS.gene26990	-0.841182	5.55E-58	-1.69E-46
MS.gene056191	MS.gene26990	0.817871	2.63E-52	-1.69E-46
MS.gene056314	MS.gene26990	0.869776	2.40E-66	-1.69E-46
MS.gene056407	MS.gene26990	0.841922	3.54E-58	-1.69E-46
MS.gene056410	MS.gene26990	0.831819	1.34E-55	-1.69E-46
MS.gene056609	MS.gene26990	0.846919	1.61E-59	-1.69E-46
MS.gene056612	MS.gene26990	0.907739	3.66E-81	-1.69E-46
MS.gene056659	MS.gene26990	0.840899	6.59E-58	-1.69E-46
MS.gene056719	MS.gene26990	0.833701	4.59E-56	-1.69E-46
MS.gene056772	MS.gene26990	0.816158	6.39E-52	-1.69E-46
MS.gene056796	MS.gene26990	0.800657	1.30E-48	-1.69E-46
MS.gene056875	MS.gene26990	0.802158	6.41E-49	-1.69E-46
MS.gene056979	MS.gene26990	0.850547	1.58E-60	-1.69E-46
MS.gene05702	MS.gene26990	0.879345	1.34E-69	-1.69E-46
MS.gene057121	MS.gene26990	0.85136	9.34E-61	-1.69E-46
MS.gene057245	MS.gene26990	0.839182	1.85E-57	-1.69E-46
MS.gene057260	MS.gene26990	0.805165	1.52E-49	-1.69E-46
MS.gene057295	MS.gene26990	0.806065	9.86E-50	-1.69E-46
MS.gene05733	MS.gene26990	0.821642	3.62E-53	-1.69E-46
MS.gene057396	MS.gene26990	0.800489	1.41E-48	-1.69E-46
MS.gene057439	MS.gene26990	0.870556	1.34E-66	-1.69E-46
MS.gene057448	MS.gene26990	0.848687	5.23E-60	-1.69E-46
MS.gene057449	MS.gene26990	0.833077	6.56E-56	-1.69E-46
MS.gene057450	MS.gene26990	0.859789	3.24E-63	-1.69E-46
MS.gene057469	MS.gene26990	0.803139	4.02E-49	-1.69E-46
MS.gene057754	MS.gene26990	0.839921	1.19E-57	-1.69E-46
MS.gene057794	MS.gene26990	0.817876	2.63E-52	-1.69E-46
MS.gene057796	MS.gene26990	0.839864	1.23E-57	-1.69E-46
MS.gene058002	MS.gene26990	0.890604	8.48E-74	-1.69E-46
MS.gene058082	MS.gene26990	0.894447	2.44E-75	-1.69E-46
MS.gene05811	MS.gene26990	0.897701	1.09E-76	-1.69E-46
MS.gene058142	MS.gene26990	0.865076	7.67E-65	-1.69E-46
MS.gene058182	MS.gene26990	0.823676	1.22E-53	-1.69E-46
MS.gene058201	MS.gene26990	0.825758	3.94E-54	-1.69E-46
MS.gene058233	MS.gene26990	0.838707	2.45E-57	-1.69E-46
MS.gene058276	MS.gene26990	0.85049	1.64E-60	-1.69E-46
MS.gene058293	MS.gene26990	0.824924	6.20E-54	-1.69E-46
MS.gene058365	MS.gene26990	0.834141	3.56E-56	-1.69E-46
MS.gene058433	MS.gene26990	0.824921	6.21E-54	-1.69E-46
MS.gene058660	MS.gene26990	0.865767	4.65E-65	-1.69E-46
MS.gene058661	MS.gene26990	-0.842726	2.17E-58	-1.69E-46
MS.gene058710	MS.gene26990	0.851032	1.16E-60	-1.69E-46
MS.gene058749	MS.gene26990	0.854231	1.41E-61	-1.69E-46
MS.gene058787	MS.gene26990	0.821954	3.07E-53	-1.69E-46
MS.gene058833	MS.gene26990	0.813954	1.97E-51	-1.69E-46
MS.gene058845	MS.gene26990	0.888878	4.00E-73	-1.69E-46
MS.gene05886	MS.gene26990	0.803546	3.31E-49	-1.69E-46
MS.gene058928	MS.gene26990	0.809136	2.20E-50	-1.69E-46
MS.gene059033	MS.gene26990	-0.820255	7.55E-53	-1.69E-46
MS.gene05907	MS.gene26990	0.887557	1.29E-72	-1.69E-46
MS.gene059228	MS.gene26990	0.849061	4.12E-60	-1.69E-46
MS.gene059285	MS.gene26990	0.868696	5.39E-66	-1.69E-46
MS.gene059294	MS.gene26990	0.83586	1.31E-56	-1.69E-46
MS.gene059326	MS.gene26990	0.821747	3.43E-53	-1.69E-46
MS.gene059342	MS.gene26990	0.834263	3.32E-56	-1.69E-46
MS.gene059518	MS.gene26990	0.891515	3.70E-74	-1.69E-46
MS.gene059597	MS.gene26990	0.889667	1.97E-73	-1.69E-46
MS.gene05959	MS.gene26990	0.848918	4.51E-60	-1.69E-46
MS.gene059676	MS.gene26990	0.854392	1.27E-61	-1.69E-46
MS.gene059688	MS.gene26990	0.85696	2.26E-62	-1.69E-46
MS.gene059692	MS.gene26990	0.877198	7.61E-69	-1.69E-46
MS.gene059695	MS.gene26990	0.871364	7.23E-67	-1.69E-46
MS.gene059708	MS.gene26990	0.847161	1.38E-59	-1.69E-46
MS.gene05984	MS.gene26990	0.912895	1.15E-83	-1.69E-46
MS.gene059894	MS.gene26990	0.926235	6.19E-91	-1.69E-46
MS.gene059899	MS.gene26990	0.887189	1.78E-72	-1.69E-46
MS.gene059974	MS.gene26990	0.816351	5.78E-52	-1.69E-46
MS.gene060005	MS.gene26990	0.81392	2.00E-51	-1.69E-46
MS.gene060084	MS.gene26990	0.822667	2.10E-53	-1.69E-46
MS.gene06037	MS.gene26990	0.872898	2.23E-67	-1.69E-46
MS.gene060407	MS.gene26990	0.834806	2.42E-56	-1.69E-46
MS.gene060476	MS.gene26990	0.864118	1.53E-64	-1.69E-46
MS.gene060495	MS.gene26990	0.862645	4.38E-64	-1.69E-46
MS.gene06090	MS.gene26990	0.817584	3.06E-52	-1.69E-46
MS.gene061049	MS.gene26990	0.92259	8.07E-89	-1.69E-46
MS.gene061051	MS.gene26990	-0.860926	1.47E-63	-1.69E-46
MS.gene061112	MS.gene26990	0.847643	1.02E-59	-1.69E-46
MS.gene061113	MS.gene26990	0.813654	2.29E-51	-1.69E-46
MS.gene061159	MS.gene26990	0.807432	5.07E-50	-1.69E-46
MS.gene061265	MS.gene26990	0.848155	7.34E-60	-1.69E-46

PPI:

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene26990.t1	MTR_1g022450	98.507	134	2	0	1	134	1	134	1.81e-96	273
MS.gene26990.t1	MTR_1g022450	97.059	136	2	1	1	134	1	136	1.30e-94	269

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene26990.t1	AT1G75350	59.398	133	42	2	1	121	1	133	1.76e-52	162

Find 31 sgRNAs with CRISPR-Local

Find 49 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CATCAACCACATACTCTTTC+TGG	0.120517	1.3:+2489670	None:intergenic
TTAGCATCTTCGTAGAATTT+TGG	0.129378	1.3:+2489735	None:intergenic
CGGTGAATTGTCGCAGATTA+TGG	0.250630	1.3:-2489559	MS.gene26990:CDS
ATGGAGATTCCCGTGCTTAA+AGG	0.284752	1.3:-2489540	MS.gene26990:CDS
AGGTAACAGGTCTGCTCTTA+TGG	0.321423	1.3:-2489619	MS.gene26990:CDS
GACCTGTTACCTAGGTAAAA+TGG	0.333258	1.3:+2489630	None:intergenic
TTAATCCCTTTACGTCTAGA+AGG	0.369196	1.3:+2489504	None:intergenic
TTATTCCTTCTAGACGTAAA+GGG	0.415844	1.3:-2489509	MS.gene26990:CDS
ATCAACCACATACTCTTTCT+GGG	0.433365	1.3:+2489671	None:intergenic
ATAACCAATACCTTTGTTCA+AGG	0.436471	1.3:-2489972	MS.gene26990:CDS
GTTATTCCTTCTAGACGTAA+AGG	0.445368	1.3:-2489510	MS.gene26990:CDS
TATGTGGTTGATGTTTGGTC+TGG	0.461863	1.3:-2489660	MS.gene26990:CDS
TCTTATGGTGAGTGATGATC+AGG	0.479241	1.3:-2489604	MS.gene26990:CDS
AAGAGTATGTGGTTGATGTT+TGG	0.479372	1.3:-2489665	MS.gene26990:CDS
GAGAAGTTTCGTAAGAAGTT+CGG	0.493517	1.3:-2489579	MS.gene26990:CDS
AACGAGCTTGTGATGACAAC+TGG	0.499125	1.3:-2489699	MS.gene26990:CDS
ATGTGGTTGATGTTTGGTCT+GGG	0.499973	1.3:-2489659	MS.gene26990:CDS
TTTGTGGGAAGTGGAAGGAA+TGG	0.505762	1.3:+2489945	None:intergenic
AAAGGGATTAAAAGTGGTGG+TGG	0.510648	1.3:-2489492	MS.gene26990:CDS
AACAATCTCACCTTTAAGCA+CGG	0.530428	1.3:+2489530	None:intergenic
TAAGAGCAGACCTGTTACCT+AGG	0.535799	1.3:+2489622	None:intergenic
AAAATTCTACGAAGATGCTA+AGG	0.547901	1.3:-2489733	MS.gene26990:CDS
ACAATCTCACCTTTAAGCAC+GGG	0.566321	1.3:+2489531	None:intergenic
AGACGTAAAGGGATTAAAAG+TGG	0.579688	1.3:-2489498	MS.gene26990:CDS
GTTTGGTTGCAGAATCAACA+AGG	0.616245	1.3:-2489807	MS.gene26990:intron
AAGGGATTAAAAGTGGTGGT+GGG	0.621652	1.3:-2489491	MS.gene26990:CDS
CGTAAAGGGATTAAAAGTGG+TGG	0.637642	1.3:-2489495	MS.gene26990:CDS
TGTTACCTAGGTAAAATGGA+TGG	0.664203	1.3:+2489634	None:intergenic
TGGAACCCAGAAAGAGTATG+TGG	0.674951	1.3:-2489676	MS.gene26990:CDS
GAGCTTGTGATGACAACTGG+TGG	0.675964	1.3:-2489696	MS.gene26990:CDS
TATGGTGAGTGATGATCAGG+TGG	0.684535	1.3:-2489601	MS.gene26990:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	AAAAAAAACAAAAAACATGT+TGG	+	chr1.3:2489617-2489636	None:intergenic	15.0%
!!	GAAACAATAATATGAATAAT+TGG	+	chr1.3:2489581-2489600	None:intergenic	15.0%
!!	ATGAATAATTGGAAATGATA+AGG	+	chr1.3:2489570-2489589	None:intergenic	20.0%
!	AATCAACAAGGAAAAAAAGT+GGG	-	chr1.3:2489668-2489687	MS.gene26990:CDS	25.0%
	AAAATTCTACGAAGATGCTA+AGG	-	chr1.3:2489730-2489749	MS.gene26990:CDS	30.0%
	AATTGGAAATGATAAGGAAG+TGG	+	chr1.3:2489564-2489583	None:intergenic	30.0%
	ATAACCAATACCTTTGTTCA+AGG	-	chr1.3:2489491-2489510	MS.gene26990:CDS	30.0%
	GAATCAACAAGGAAAAAAAG+TGG	-	chr1.3:2489667-2489686	MS.gene26990:CDS	30.0%
	TTATTCCTTCTAGACGTAAA+GGG	-	chr1.3:2489954-2489973	MS.gene26990:CDS	30.0%
!	TAGCATCTTCGTAGAATTTT+GGG	+	chr1.3:2489730-2489749	None:intergenic	30.0%
!	TTAGCATCTTCGTAGAATTT+TGG	+	chr1.3:2489731-2489750	None:intergenic	30.0%
!	TTTTTGTGTGTGTTTGTGTT+TGG	-	chr1.3:2489639-2489658	MS.gene26990:CDS	30.0%
!!	TTTTCCTTGAACAAAGGTAT+TGG	+	chr1.3:2489498-2489517	None:intergenic	30.0%
!!!	TACTACAGTACGTTTTTTGT+GGG	+	chr1.3:2489536-2489555	None:intergenic	30.0%
!!!	TTACTACAGTACGTTTTTTG+TGG	+	chr1.3:2489537-2489556	None:intergenic	30.0%
	AACAATCTCACCTTTAAGCA+CGG	+	chr1.3:2489936-2489955	None:intergenic	35.0%
	AGACGTAAAGGGATTAAAAG+TGG	-	chr1.3:2489965-2489984	MS.gene26990:CDS	35.0%
	ATCAACCACATACTCTTTCT+GGG	+	chr1.3:2489795-2489814	None:intergenic	35.0%
	GAGAAGTTTCGTAAGAAGTT+CGG	-	chr1.3:2489884-2489903	MS.gene26990:intron	35.0%
	GGAAAAAAAGTGGGCAATTT+CGG	-	chr1.3:2489677-2489696	MS.gene26990:CDS	35.0%
	GTTATTCCTTCTAGACGTAA+AGG	-	chr1.3:2489953-2489972	MS.gene26990:CDS	35.0%
	TGTTACCTAGGTAAAATGGA+TGG	+	chr1.3:2489832-2489851	None:intergenic	35.0%
	TTAATCCCTTTACGTCTAGA+AGG	+	chr1.3:2489962-2489981	None:intergenic	35.0%
!	AAGAGTATGTGGTTGATGTT+TGG	-	chr1.3:2489798-2489817	MS.gene26990:CDS	35.0%
!	ATCCATTTTACCTAGGTAAC+AGG	-	chr1.3:2489831-2489850	MS.gene26990:intron	35.0%
!	GAATGGTTTTCCTTGAACAA+AGG	+	chr1.3:2489504-2489523	None:intergenic	35.0%
	AAAGGGATTAAAAGTGGTGG+TGG	-	chr1.3:2489971-2489990	MS.gene26990:CDS	40.0%
	AAGGGATTAAAAGTGGTGGT+GGG	-	chr1.3:2489972-2489991	MS.gene26990:CDS	40.0%
	ACAATCTCACCTTTAAGCAC+GGG	+	chr1.3:2489935-2489954	None:intergenic	40.0%
	CATCAACCACATACTCTTTC+TGG	+	chr1.3:2489796-2489815	None:intergenic	40.0%
	CGTAAAGGGATTAAAAGTGG+TGG	-	chr1.3:2489968-2489987	MS.gene26990:CDS	40.0%
	GACCTGTTACCTAGGTAAAA+TGG	+	chr1.3:2489836-2489855	None:intergenic	40.0%
	GGAAATGATAAGGAAGTGGT+TGG	+	chr1.3:2489560-2489579	None:intergenic	40.0%
	GTTTGGTTGCAGAATCAACA+AGG	-	chr1.3:2489656-2489675	MS.gene26990:CDS	40.0%
	TCTTATGGTGAGTGATGATC+AGG	-	chr1.3:2489859-2489878	MS.gene26990:intron	40.0%
!	ATGTGGTTGATGTTTGGTCT+GGG	-	chr1.3:2489804-2489823	MS.gene26990:intron	40.0%
!	TATGTGGTTGATGTTTGGTC+TGG	-	chr1.3:2489803-2489822	MS.gene26990:intron	40.0%
!!!	AGTACGTTTTTTGTGGGAAG+TGG	+	chr1.3:2489530-2489549	None:intergenic	40.0%
	AACGAGCTTGTGATGACAAC+TGG	-	chr1.3:2489764-2489783	MS.gene26990:CDS	45.0%
	AGGTAACAGGTCTGCTCTTA+TGG	-	chr1.3:2489844-2489863	MS.gene26990:intron	45.0%
	ATGGAGATTCCCGTGCTTAA+AGG	-	chr1.3:2489923-2489942	MS.gene26990:intron	45.0%
	CGGTGAATTGTCGCAGATTA+TGG	-	chr1.3:2489904-2489923	MS.gene26990:intron	45.0%
	TAAGAGCAGACCTGTTACCT+AGG	+	chr1.3:2489844-2489863	None:intergenic	45.0%
	TATGGTGAGTGATGATCAGG+TGG	-	chr1.3:2489862-2489881	MS.gene26990:intron	45.0%
	TTTGTGGGAAGTGGAAGGAA+TGG	+	chr1.3:2489521-2489540	None:intergenic	45.0%
!	GGGAACCATCCATTTTACCT+AGG	-	chr1.3:2489824-2489843	MS.gene26990:intron	45.0%
!	TGGAACCCAGAAAGAGTATG+TGG	-	chr1.3:2489787-2489806	MS.gene26990:CDS	45.0%
!!!	CGTTTTTTGTGGGAAGTGGA+AGG	+	chr1.3:2489526-2489545	None:intergenic	45.0%
	GAGCTTGTGATGACAACTGG+TGG	-	chr1.3:2489767-2489786	MS.gene26990:CDS	50.0%

Chromosome	Type	Strat	End	Strand	Name
chr1.3	gene	2489479	2490006	2489479	ID=MS.gene26990
chr1.3	mRNA	2489479	2490006	2489479	ID=MS.gene26990.t1;Parent=MS.gene26990
chr1.3	exon	2489941	2490006	2489941	ID=MS.gene26990.t1.exon1;Parent=MS.gene26990.t1
chr1.3	CDS	2489941	2490006	2489941	ID=cds.MS.gene26990.t1;Parent=MS.gene26990.t1
chr1.3	exon	2489479	2489817	2489479	ID=MS.gene26990.t1.exon2;Parent=MS.gene26990.t1
chr1.3	CDS	2489479	2489817	2489479	ID=cds.MS.gene26990.t1;Parent=MS.gene26990.t1

Gene Sequence

>MS.gene26990

ATGGCGCAGTGCATAACCAATACCTTTGTTCAAGGAAAACCATTCCTTCCACTTCCCACAAAAAACGTACTGTAGTAACCAACCACTTCCTTATCATTTCCAATTATTCATATTATTGTTTCTGTATTAAACTAACCAACATGTTTTTTGTTTTTTTTTTTTTTTGTGTGTGTTTGTGTTTGGTTGCAGAATCAACAAGGAAAAAAAGTGGGCAATTTCGGAGTGTATTGCAAGAAGAAAGACATACACCCAAAATTCTACGAAGATGCTAAGGTTTACTGTAACAACGAGCTTGTGATGACAACTGGTGGAACCCAGAAAGAGTATGTGGTTGATGTTTGGTCTGGGAACCATCCATTTTACCTAGGTAACAGGTCTGCTCTTATGGTGAGTGATGATCAGGTGGAGAAGTTTCGTAAGAAGTTCGGTGAATTGTCGCAGATTATGGAGATTCCCGTGCTTAAAGGTGAGATTGTTATTCCTTCTAGACGTAAAGGGATTAAAAGTGGTGGTGGGAAGAAGAAATGA

Protein sequence

>MS.gene26990.t1

MAQCITNTFVQGKPFLPLPTKNNQQGKKVGNFGVYCKKKDIHPKFYEDAKVYCNNELVMTTGGTQKEYVVDVWSGNHPFYLGNRSALMVSDDQVEKFRKKFGELSQIMEIPVLKGEIVIPSRRKGIKSGGGKKK