AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene99375


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene99375.t1 MTR_4g024660 62.234 376 106 3 1 343 1 373 2.74e-166 468
MS.gene99375.t1 MTR_8g063070 60.372 376 113 3 1 343 1 373 1.33e-162 459
MS.gene99375.t1 MTR_4g119410 63.130 377 101 4 1 343 1 373 1.06e-160 454
MS.gene99375.t1 MTR_8g062600 60.372 376 113 3 1 343 1 373 1.27e-160 454
MS.gene99375.t1 MTR_7g056347 58.511 376 120 3 1 343 1 373 1.28e-157 446
MS.gene99375.t1 MTR_8g006930 60.372 376 113 3 1 343 1 373 1.22e-155 441
MS.gene99375.t1 MTR_8g469400 61.170 376 97 5 1 343 1 360 3.00e-155 440
MS.gene99375.t1 MTR_7g056393 59.574 376 116 3 1 343 1 373 3.73e-151 430
MS.gene99375.t1 MTR_7g078010 59.043 376 118 3 1 343 1 373 5.50e-149 424
MS.gene99375.t1 MTR_1g093120 58.667 375 110 8 8 343 2 370 3.29e-147 420
MS.gene99375.t1 MTR_1g093140 54.068 381 126 8 8 343 2 378 8.93e-140 401
MS.gene99375.t1 MTR_2g069010 53.562 379 136 6 1 343 1 375 9.70e-137 394
MS.gene99375.t1 MTR_1g093110 52.957 372 131 7 11 343 8 374 3.20e-135 389
MS.gene99375.t1 MTR_2g068950 53.994 363 127 6 17 343 11 369 4.61e-131 379
MS.gene99375.t1 MTR_2g069060 52.394 376 119 7 1 343 1 349 1.69e-129 374
MS.gene99375.t1 MTR_2g068960 53.168 363 130 6 17 343 11 369 4.04e-128 371
MS.gene99375.t1 MTR_2g069020 52.958 355 127 6 12 331 10 359 1.09e-125 365
MS.gene99375.t1 MTR_8g041600 48.656 372 150 6 8 343 8 374 4.71e-125 364
MS.gene99375.t1 MTR_2g069020 52.958 355 127 6 12 331 10 359 5.11e-125 364
MS.gene99375.t1 MTR_8g041620 48.387 372 151 6 8 343 8 374 2.73e-124 362
MS.gene99375.t1 MTR_8g009160 49.444 360 132 6 22 343 17 364 1.92e-123 359
MS.gene99375.t1 MTR_8g009080 49.337 377 151 5 1 343 27 397 7.13e-123 359
MS.gene99375.t1 MTR_8g028435 49.859 355 138 7 22 343 17 364 3.43e-120 351
MS.gene99375.t1 MTR_7g056353 50.975 359 114 4 16 342 18 346 1.28e-119 354
MS.gene99375.t1 MTR_8g009090 48.518 371 148 7 6 343 4 364 3.04e-119 348
MS.gene99375.t1 MTR_8g008930 48.925 372 146 8 6 343 4 365 1.60e-117 344
MS.gene99375.t1 MTR_8g009170 48.493 365 143 9 14 343 12 366 2.97e-116 341
MS.gene99375.t1 MTR_1g043760 47.075 359 148 6 18 342 5 355 1.01e-114 337
MS.gene99375.t1 MTR_2g069190 49.030 361 142 6 18 343 18 371 2.42e-114 336
MS.gene99375.t1 MTR_2g069210 49.198 374 136 8 11 343 7 367 3.66e-114 336
MS.gene99375.t1 MTR_8g009110 47.645 361 138 7 22 343 17 365 3.91e-114 335
MS.gene99375.t1 MTR_2g069090 47.757 379 155 7 1 343 1 372 1.40e-113 334
MS.gene99375.t1 MTR_1g043770 48.324 358 146 6 18 343 5 355 2.58e-112 330
MS.gene99375.t1 MTR_4g117880 48.810 336 131 6 22 323 17 345 4.81e-112 330
MS.gene99375.t1 MTR_7g078010 58.966 290 84 2 1 257 1 288 6.80e-112 328
MS.gene99375.t1 MTR_2g069300 46.739 368 141 9 18 343 4 358 4.31e-110 325
MS.gene99375.t1 MTR_1g043810 47.175 354 148 5 18 338 5 352 4.60e-110 325
MS.gene99375.t1 MTR_0032s0040 45.333 375 154 5 12 343 7 373 1.10e-108 322
MS.gene99375.t1 MTR_1g043775 46.610 354 150 5 18 338 5 352 5.50e-107 317
MS.gene99375.t1 MTR_7g029655 44.595 370 161 5 12 343 7 370 3.17e-103 308
MS.gene99375.t1 MTR_8g009150 43.213 361 134 8 22 343 17 345 5.25e-96 289
MS.gene99375.t1 MTR_1g070185 42.896 366 164 5 12 343 13 367 1.29e-95 288
MS.gene99375.t1 MTR_8g041600 47.203 286 113 3 8 257 8 291 4.64e-95 285
MS.gene99375.t1 MTR_8g009120 42.936 361 143 8 22 343 17 353 7.43e-93 281
MS.gene99375.t1 MTR_8g009080 47.931 290 115 3 1 256 27 314 3.78e-90 273
MS.gene99375.t1 MTR_8g009080 47.038 287 116 3 1 253 27 311 8.12e-88 268
MS.gene99375.t1 MTR_2g069060 53.012 249 80 3 44 257 2 248 4.23e-87 263
MS.gene99375.t1 MTR_1g043770 48.708 271 104 4 18 256 5 272 6.93e-87 264
MS.gene99375.t1 MTR_7g105070 40.659 364 174 6 15 343 6 362 1.37e-85 263
MS.gene99375.t1 MTR_8g009170 46.931 277 107 6 14 256 12 282 1.00e-84 258
MS.gene99375.t1 MTR_1g043810 47.059 272 109 3 18 256 5 274 2.01e-83 256
MS.gene99375.t1 MTR_1g043775 46.324 272 111 3 18 256 5 274 8.38e-81 248
MS.gene99375.t1 MTR_8g009180 52.564 234 81 4 126 338 65 289 8.90e-77 238
MS.gene99375.t1 MTR_1g032220 39.286 364 170 6 17 342 21 371 6.22e-75 236
MS.gene99375.t1 MTR_1g032250 38.527 353 172 4 17 334 21 363 1.56e-73 232
MS.gene99375.t1 MTR_1g032140 38.504 361 177 4 17 342 14 364 3.02e-73 231
MS.gene99375.t1 MTR_1g043840 52.273 176 82 2 150 324 50 224 1.61e-58 192
MS.gene99375.t1 MTR_7g068650 33.807 352 180 10 33 339 15 358 1.55e-50 172
MS.gene99375.t1 MTR_4g015790 32.410 361 182 11 33 339 14 366 4.87e-50 171
MS.gene99375.t1 MTR_6g015950 35.455 330 157 11 42 331 14 327 3.06e-49 168
MS.gene99375.t1 MTR_1g070085 32.602 319 161 6 64 342 34 338 3.17e-48 166
MS.gene99375.t1 MTR_1g070085 32.602 319 161 6 64 342 34 338 3.17e-48 166
MS.gene99375.t1 MTR_3g063180 31.476 359 182 12 33 343 10 352 7.31e-48 165
MS.gene99375.t1 MTR_5g032870 30.671 313 166 7 66 338 37 338 3.12e-47 163
MS.gene99375.t1 MTR_8g024120 31.529 314 168 5 66 343 41 343 8.43e-46 159
MS.gene99375.t1 MTR_2g072910 29.060 351 198 9 32 343 16 354 1.40e-45 159
MS.gene99375.t1 MTR_3g092890 32.166 314 162 8 66 342 37 336 3.08e-45 157
MS.gene99375.t1 MTR_4g087110 32.588 313 151 10 67 327 26 330 9.12e-45 157
MS.gene99375.t1 MTR_5g082750 32.676 355 181 12 33 342 14 355 1.25e-44 157
MS.gene99375.t1 MTR_7g056370 44.565 184 67 2 27 177 6 187 3.38e-44 151
MS.gene99375.t1 MTR_4g087120 32.132 333 162 12 67 343 26 350 3.51e-44 155
MS.gene99375.t1 MTR_1g070080 32.188 320 162 7 64 343 35 339 4.00e-44 155
MS.gene99375.t1 MTR_5g032880 30.938 320 168 8 66 343 375 683 8.17e-44 160
MS.gene99375.t1 MTR_5g032880 29.412 306 159 6 66 331 37 325 4.26e-40 150
MS.gene99375.t1 MTR_0009s0050 31.579 323 171 9 59 343 38 348 9.00e-44 154
MS.gene99375.t1 MTR_1g070135 30.341 323 162 7 64 342 35 338 1.05e-43 154
MS.gene99375.t1 MTR_2g072890 29.874 318 176 6 63 343 48 355 1.07e-43 154
MS.gene99375.t1 MTR_0009s0050 31.579 323 171 9 59 343 38 348 1.12e-43 154
MS.gene99375.t1 MTR_5g065010 30.816 331 181 8 32 324 3 323 1.27e-43 154
MS.gene99375.t1 MTR_5g048550 30.857 350 191 10 32 343 12 348 2.08e-43 153
MS.gene99375.t1 MTR_5g048570 29.855 345 191 9 32 339 12 342 3.67e-43 152
MS.gene99375.t1 MTR_2g083000 31.307 329 168 9 49 338 11 320 3.80e-43 152
MS.gene99375.t1 MTR_5g055680 31.692 325 169 9 60 343 36 348 1.11e-42 151
MS.gene99375.t1 MTR_3g091360 32.903 310 158 10 51 324 40 335 1.77e-42 151
MS.gene99375.t1 MTR_7g102820 30.595 353 177 11 28 324 21 361 2.13e-42 151
MS.gene99375.t1 MTR_1g034120 30.476 315 159 9 66 327 25 332 3.00e-42 150
MS.gene99375.t1 MTR_0328s0030 29.429 350 196 9 32 343 10 346 3.51e-42 150
MS.gene99375.t1 MTR_1g062110 30.205 341 178 8 32 324 26 354 4.12e-42 150
MS.gene99375.t1 MTR_8g064200 29.118 340 193 10 32 334 17 345 4.78e-42 150
MS.gene99375.t1 MTR_8g064200 29.118 340 193 10 32 334 22 350 6.37e-42 149
MS.gene99375.t1 MTR_5g048470 28.653 349 202 10 32 343 17 355 9.46e-42 149
MS.gene99375.t1 MTR_2g068840 28.161 348 197 7 32 338 21 356 1.34e-41 149
MS.gene99375.t1 MTR_5g055820 28.045 353 198 10 32 343 12 349 1.40e-41 148
MS.gene99375.t1 MTR_1g034060 30.476 315 159 9 66 327 25 332 1.52e-41 148
MS.gene99375.t1 MTR_3g091350 30.357 336 178 11 31 324 21 342 1.78e-41 148
MS.gene99375.t1 MTR_1g033810 29.940 334 186 10 41 336 20 343 2.81e-41 148
MS.gene99375.t1 MTR_3g070860 31.348 319 170 9 64 342 47 356 3.81e-41 147
MS.gene99375.t1 MTR_3g083370 32.423 293 153 10 66 325 3 283 4.02e-41 146
MS.gene99375.t1 MTR_5g055690 28.490 351 199 8 32 343 12 349 4.94e-41 147
MS.gene99375.t1 MTR_5g085330 32.432 296 153 10 65 324 3 287 7.49e-41 145
MS.gene99375.t1 MTR_7g016090 31.596 307 151 10 66 331 38 326 9.85e-41 145
MS.gene99375.t1 MTR_7g016090 31.596 307 151 10 66 331 40 328 1.09e-40 145
MS.gene99375.t1 MTR_1g070085 36.564 227 128 4 122 342 44 260 1.16e-40 144
MS.gene99375.t1 MTR_4g093840 30.255 314 173 8 67 343 62 366 1.61e-40 146
MS.gene99375.t1 MTR_4g087090 31.003 329 168 13 66 343 29 349 2.44e-40 145
MS.gene99375.t1 MTR_1g070120 30.351 313 169 6 66 341 37 337 3.21e-40 144
MS.gene99375.t1 MTR_2g102570 32.468 308 143 10 67 329 52 339 4.67e-40 145
MS.gene99375.t1 MTR_4g087140 31.595 326 156 13 61 327 14 331 7.96e-40 144
MS.gene99375.t1 MTR_2g025120 32.215 298 161 11 66 329 3 293 1.34e-39 142
MS.gene99375.t1 MTR_0009s0480 30.000 350 192 11 33 343 12 347 3.16e-39 142
MS.gene99375.t1 MTR_1g070100 36.564 227 128 4 122 342 40 256 4.87e-39 139
MS.gene99375.t1 MTR_4g087100 31.949 313 153 11 67 327 26 330 5.32e-39 141
MS.gene99375.t1 MTR_5g055900 29.178 353 193 10 32 343 12 348 6.22e-39 141
MS.gene99375.t1 MTR_5g048850 28.977 352 187 11 32 339 12 344 8.08e-39 141
MS.gene99375.t1 MTR_3g088565 33.077 260 128 10 65 286 1 252 1.06e-38 140
MS.gene99375.t1 MTR_7g062570 27.324 355 196 11 33 343 20 356 1.59e-38 140
MS.gene99375.t1 MTR_1g034140 29.268 328 165 8 53 327 9 322 1.61e-38 140
MS.gene99375.t1 MTR_2g083030 29.210 291 155 5 67 323 37 310 2.58e-38 139
MS.gene99375.t1 MTR_5g048740 29.226 349 197 9 33 343 11 347 2.73e-38 140
MS.gene99375.t1 MTR_7g102720 29.664 327 180 7 53 343 23 335 3.12e-38 139
MS.gene99375.t1 MTR_3g058610 30.986 284 155 7 48 293 20 300 7.99e-38 139
MS.gene99375.t1 MTR_7g062580 29.605 304 159 12 67 330 55 343 1.20e-37 138
MS.gene99375.t1 MTR_7g063730 28.931 318 171 11 66 343 63 365 4.99e-37 137
MS.gene99375.t1 MTR_2g437380 28.045 353 199 9 33 343 17 356 5.20e-37 136
MS.gene99375.t1 MTR_8g075830 29.900 301 168 7 48 309 20 316 2.01e-36 135
MS.gene99375.t1 MTR_5g055800 28.286 350 199 11 32 343 12 347 2.44e-36 134
MS.gene99375.t1 MTR_5g022020 30.820 305 160 9 48 309 20 316 3.24e-36 134
MS.gene99375.t1 MTR_0009s0050 34.529 223 134 5 126 343 35 250 4.37e-36 131
MS.gene99375.t1 MTR_0009s0050 34.529 223 134 5 126 343 35 250 5.05e-36 131
MS.gene99375.t1 MTR_8g075890 29.236 301 170 7 48 309 20 316 5.61e-36 134
MS.gene99375.t1 MTR_5g005570 30.000 310 168 7 49 323 14 309 9.20e-36 132
MS.gene99375.t1 MTR_3g043900 29.178 353 193 9 32 343 17 353 9.67e-36 133
MS.gene99375.t1 MTR_3g045230 27.809 356 195 10 32 343 17 354 2.30e-35 132
MS.gene99375.t1 MTR_2g068800 27.863 262 162 6 32 271 21 277 9.39e-35 129
MS.gene99375.t1 MTR_3g117420 29.429 333 180 10 49 343 39 354 1.05e-34 130
MS.gene99375.t1 MTR_1g062110 29.927 274 139 6 32 257 26 294 1.46e-34 129
MS.gene99375.t1 MTR_7g451860 31.338 284 160 4 67 317 41 322 1.66e-34 129
MS.gene99375.t1 MTR_7g047670 31.338 284 160 4 67 317 41 322 1.66e-34 129
MS.gene99375.t1 MTR_7g062600 28.939 311 165 10 67 336 51 346 3.38e-34 129
MS.gene99375.t1 MTR_7g062550 29.467 319 166 11 67 343 60 361 3.77e-34 129
MS.gene99375.t1 MTR_5g011250 27.473 364 195 11 33 342 8 356 5.88e-34 128
MS.gene99375.t1 MTR_3g026150 28.829 333 184 10 43 335 34 353 2.90e-33 126
MS.gene99375.t1 MTR_1g070135 31.092 238 108 5 64 257 35 260 5.93e-33 124
MS.gene99375.t1 MTR_8g074070 28.829 333 182 11 49 343 39 354 7.42e-33 125
MS.gene99375.t1 MTR_4g074130 30.928 291 151 10 67 323 40 314 2.68e-32 124
MS.gene99375.t1 MTR_7g016080 28.834 326 162 13 55 338 30 327 3.21e-32 123
MS.gene99375.t1 MTR_8g074050 28.829 333 182 10 49 343 39 354 3.64e-32 123
MS.gene99375.t1 MTR_0056s0160 31.390 223 141 4 126 343 18 233 4.34e-32 120
MS.gene99375.t1 MTR_4g099380 40.476 168 54 4 19 149 124 282 4.51e-32 121
MS.gene99375.t1 MTR_3g072810 28.235 340 185 7 33 330 6 328 6.19e-32 122
MS.gene99375.t1 MTR_0009s0050 40.000 150 82 4 195 343 26 168 8.45e-32 118
MS.gene99375.t1 MTR_2g069070 39.674 184 54 4 1 149 1 162 1.02e-31 118
MS.gene99375.t1 MTR_3g083370 31.111 225 118 6 66 257 3 223 1.09e-31 119
MS.gene99375.t1 MTR_7g045650 33.061 245 118 7 64 269 57 294 1.44e-31 121
MS.gene99375.t1 MTR_7g081710 28.313 332 181 12 36 325 17 333 2.10e-31 121
MS.gene99375.t1 MTR_4g087130 31.153 321 160 12 67 333 26 339 5.70e-31 120
MS.gene99375.t1 MTR_4g116010 29.206 315 169 11 67 343 50 348 9.14e-31 119
MS.gene99375.t1 MTR_1g048940 27.273 330 182 12 38 325 18 331 1.26e-30 119
MS.gene99375.t1 MTR_0009s0480 31.716 268 136 9 32 260 11 270 1.39e-30 117
MS.gene99375.t1 MTR_1g032240 43.791 153 77 1 134 286 1 144 1.76e-30 114
MS.gene99375.t1 MTR_6g464620 27.864 323 173 7 48 318 36 350 1.94e-30 119
MS.gene99375.t1 MTR_7g062560 27.052 329 198 9 44 343 38 353 4.11e-30 118
MS.gene99375.t1 MTR_1g102070 27.744 328 186 6 57 341 49 368 4.65e-30 118
MS.gene99375.t1 MTR_5g055690 28.996 269 146 6 32 261 12 274 6.80e-30 115
MS.gene99375.t1 MTR_2g025120 30.667 225 119 8 66 257 3 223 1.25e-29 113
MS.gene99375.t1 MTR_7g084360 47.273 165 39 2 150 313 10 127 2.07e-29 110
MS.gene99375.t1 MTR_8g074070 29.618 314 185 12 49 343 39 335 3.82e-29 115
MS.gene99375.t1 MTR_5g059130 26.765 340 182 10 38 330 14 333 4.58e-29 114
MS.gene99375.t1 MTR_1g081840 27.469 324 173 9 57 332 42 351 3.46e-28 113
MS.gene99375.t1 MTR_2g072910 28.358 268 148 7 32 260 16 278 5.27e-28 110
MS.gene99375.t1 MTR_5g048850 29.851 268 138 9 32 258 12 270 7.24e-28 110
MS.gene99375.t1 MTR_8g033380 30.034 293 155 7 65 315 52 336 7.46e-28 112
MS.gene99375.t1 MTR_6g092620 29.183 257 142 8 65 286 1 252 1.09e-27 110
MS.gene99375.t1 MTR_3g040410 28.283 297 170 10 67 329 6 293 1.56e-27 110
MS.gene99375.t1 MTR_3g072820 25.714 315 172 8 60 330 35 331 1.73e-27 110
MS.gene99375.t1 MTR_2g437380 31.140 228 136 5 126 343 46 262 3.55e-27 108
MS.gene99375.t1 MTR_3g026150 34.715 193 116 5 145 335 66 250 4.96e-27 107
MS.gene99375.t1 MTR_3g464530 28.620 297 150 10 67 320 34 311 7.99e-27 108
MS.gene99375.t1 MTR_3g117485 27.852 298 168 8 61 319 43 332 9.25e-27 108
MS.gene99375.t1 MTR_3g088745 27.451 306 167 8 65 325 34 329 5.74e-26 107
MS.gene99375.t1 MTR_5g059140 25.697 323 167 10 42 313 16 316 1.75e-25 105
MS.gene99375.t1 MTR_3g096500 26.220 328 189 8 59 341 56 375 3.80e-25 104
MS.gene99375.t1 MTR_4g099390 55.814 86 36 2 258 343 1 84 6.61e-25 96.7
MS.gene99375.t1 MTR_8g093930 25.507 345 198 10 28 325 6 338 9.26e-25 103
MS.gene99375.t1 MTR_3g026150 28.627 255 136 8 43 257 34 282 1.18e-24 101
MS.gene99375.t1 MTR_4g123020 27.759 299 157 11 67 323 20 301 5.25e-24 100
MS.gene99375.t1 MTR_4g132770 39.535 129 72 4 197 324 32 155 6.97e-24 96.7
MS.gene99375.t1 MTR_1g044105 32.738 168 73 3 18 147 5 170 9.02e-24 96.7
MS.gene99375.t1 MTR_3g117485 31.609 174 110 3 148 319 94 260 1.02e-23 99.0
MS.gene99375.t1 MTR_1g011580 26.557 305 157 9 67 329 63 342 1.08e-23 100
MS.gene99375.t1 MTR_0009s0400 33.333 150 92 4 195 343 2 144 1.22e-23 95.5
MS.gene99375.t1 MTR_8g093980 28.529 333 178 12 56 341 46 365 1.48e-23 100
MS.gene99375.t1 MTR_2g019370 27.010 311 148 11 67 323 28 313 5.91e-23 98.2
MS.gene99375.t1 MTR_5g025050 27.331 311 164 11 67 338 5 292 8.03e-23 97.1
MS.gene99375.t1 MTR_1g070110 31.579 228 110 6 121 342 46 233 9.28e-23 95.5
MS.gene99375.t1 MTR_5g027230 27.778 306 167 12 66 335 5 292 1.13e-22 96.7
MS.gene99375.t1 MTR_5g025090 26.875 320 166 11 66 343 4 297 1.17e-22 96.7
MS.gene99375.t1 MTR_1g027290 26.687 326 182 10 63 343 25 338 6.35e-22 95.1
MS.gene99375.t1 MTR_3g464530 28.205 234 110 7 67 257 34 252 6.82e-22 93.6
MS.gene99375.t1 MTR_1g086550 26.727 333 172 11 65 343 18 332 7.71e-22 95.1
MS.gene99375.t1 MTR_5g024940 27.740 292 172 11 66 339 5 275 1.15e-21 93.6
MS.gene99375.t1 MTR_8g102600 27.844 334 161 15 56 332 8 318 1.17e-21 94.4
MS.gene99375.t1 MTR_5g025060 26.740 273 161 9 66 323 5 253 1.94e-21 92.8
MS.gene99375.t1 MTR_2g033270 27.445 317 174 13 65 342 17 316 4.82e-21 92.4
MS.gene99375.t1 MTR_6g088665 26.235 324 165 12 69 332 20 329 6.00e-21 92.4
MS.gene99375.t1 MTR_6g088665 26.154 325 165 12 69 332 20 330 7.91e-21 92.0
MS.gene99375.t1 MTR_8g030880 28.618 304 164 13 66 327 4 296 2.56e-20 90.5
MS.gene99375.t1 MTR_4g115990 32.642 193 117 7 145 334 136 318 4.21e-20 89.7
MS.gene99375.t1 MTR_8g102600 29.557 203 125 7 139 332 75 268 4.09e-19 86.3
MS.gene99375.t1 MTR_4g100600 31.100 209 127 7 139 339 116 315 6.79e-19 86.3
MS.gene99375.t1 MTR_4g100590 23.824 319 176 11 59 329 1 300 1.22e-18 85.5
MS.gene99375.t1 MTR_2g070870 26.059 307 160 12 66 328 27 310 4.81e-18 84.0
MS.gene99375.t1 MTR_8g008960 52.632 76 32 2 268 343 31 102 1.56e-17 77.4
MS.gene99375.t1 MTR_7g077670 27.362 307 168 11 61 327 5 296 2.51e-17 82.0
MS.gene99375.t1 MTR_4g100590 31.667 180 103 7 158 329 86 253 5.57e-17 80.1
MS.gene99375.t1 MTR_8g461330 25.263 285 153 10 94 328 44 318 7.24e-17 80.9
MS.gene99375.t1 MTR_3g040440 45.312 64 35 0 207 270 15 78 1.81e-13 69.7
MS.gene99375.t1 MTR_4g096840 21.884 329 189 10 47 329 13 319 3.37e-13 70.1
MS.gene99375.t1 MTR_4g011720 26.404 178 122 4 148 324 124 293 3.43e-13 69.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene99375.t1 AT5G59530 49.051 369 142 6 13 343 4 364 5.86e-124 360
MS.gene99375.t1 AT5G59540 48.098 368 148 5 13 343 5 366 1.11e-123 360
MS.gene99375.t1 AT1G04350 47.934 363 145 5 17 343 6 360 6.39e-120 350
MS.gene99375.t1 AT1G06620 47.934 363 149 5 15 343 9 365 3.23e-117 343
MS.gene99375.t1 AT2G30840 47.397 365 153 3 14 343 2 362 6.13e-112 330
MS.gene99375.t1 AT1G06650 45.528 369 156 5 14 343 7 369 2.47e-111 328
MS.gene99375.t1 AT5G43450 46.409 362 150 5 13 338 4 357 1.64e-110 326
MS.gene99375.t1 AT1G06640 46.049 367 153 5 16 343 9 369 2.72e-109 323
MS.gene99375.t1 AT2G30840 46.301 365 151 4 14 343 2 356 3.74e-106 315
MS.gene99375.t1 AT5G43440 45.455 363 153 7 19 343 10 365 3.28e-105 313
MS.gene99375.t1 AT1G03410 44.110 365 161 6 16 343 3 361 3.52e-104 310
MS.gene99375.t1 AT1G03410 44.110 365 161 6 16 343 40 398 9.47e-104 310
MS.gene99375.t1 AT1G04380 46.884 337 132 6 42 343 21 345 3.02e-103 307
MS.gene99375.t1 AT2G30830 44.904 363 157 6 16 343 4 358 3.17e-103 308
MS.gene99375.t1 AT2G25450 42.936 361 168 4 16 343 4 359 9.30e-103 306
MS.gene99375.t1 AT1G03400 44.628 363 152 6 16 343 3 351 4.72e-102 304
MS.gene99375.t1 AT1G06645 42.408 382 171 7 2 343 7 379 2.23e-100 301
MS.gene99375.t1 AT1G03400 41.432 391 152 7 16 343 3 379 1.36e-95 289
MS.gene99375.t1 AT3G61400 42.407 349 151 7 18 323 10 351 8.34e-95 286
MS.gene99375.t1 AT5G59540 45.035 282 116 3 13 257 5 284 5.38e-89 269
MS.gene99375.t1 AT1G06620 47.101 276 110 3 15 256 9 282 3.34e-88 266
MS.gene99375.t1 AT5G43450 45.296 287 117 3 13 263 4 286 3.13e-85 259
MS.gene99375.t1 AT1G06650 44.523 283 115 4 14 257 7 286 4.55e-83 254
MS.gene99375.t1 AT2G30840 46.403 278 114 2 14 256 2 279 6.56e-83 254
MS.gene99375.t1 AT1G06640 43.289 298 120 5 16 267 9 303 3.16e-82 253
MS.gene99375.t1 AT1G06640 44.840 281 113 4 16 257 9 286 2.94e-81 249
MS.gene99375.t1 AT5G43440 44.928 276 111 5 19 256 10 282 7.47e-79 243
MS.gene99375.t1 AT3G61400 40.989 283 120 6 18 257 10 288 2.10e-71 224
MS.gene99375.t1 AT1G04380 45.020 251 95 4 42 257 21 263 4.44e-71 223
MS.gene99375.t1 AT4G10500 33.125 320 166 6 60 342 37 345 9.37e-52 175
MS.gene99375.t1 AT4G10490 31.776 321 170 6 60 342 35 344 1.16e-50 172
MS.gene99375.t1 AT3G13610 31.733 375 189 12 15 343 8 361 7.02e-50 171
MS.gene99375.t1 AT5G24530 32.948 346 180 10 36 341 5 338 4.63e-49 168
MS.gene99375.t1 AT1G55290 32.861 353 172 10 32 339 25 357 5.78e-49 168
MS.gene99375.t1 AT3G12900 29.155 343 197 6 32 339 21 352 1.56e-45 159
MS.gene99375.t1 AT1G78550 31.884 345 185 11 38 343 23 356 2.56e-45 158
MS.gene99375.t1 AT4G16330 32.063 315 153 10 66 339 66 360 3.37e-45 158
MS.gene99375.t1 AT3G19000 30.994 342 170 10 58 342 19 351 7.75e-45 157
MS.gene99375.t1 AT3G11180 31.662 379 194 12 7 339 35 394 2.21e-44 157
MS.gene99375.t1 AT4G25310 30.769 338 189 9 41 343 26 353 5.33e-44 155
MS.gene99375.t1 AT3G11180 31.956 363 182 12 7 323 35 378 8.15e-44 155
MS.gene99375.t1 AT2G36690 31.268 339 177 10 30 324 18 344 3.27e-43 153
MS.gene99375.t1 AT2G36690 31.268 339 177 10 30 324 18 344 3.27e-43 153
MS.gene99375.t1 AT5G05600 30.110 362 203 11 19 339 13 365 3.02e-42 150
MS.gene99375.t1 AT4G25300 30.636 346 189 10 38 343 22 356 1.23e-41 149
MS.gene99375.t1 AT2G38240 30.055 366 195 12 23 343 2 351 1.41e-41 148
MS.gene99375.t1 AT1G17010 28.571 343 195 9 41 343 26 358 1.75e-41 148
MS.gene99375.t1 AT1G17020 29.769 346 193 9 38 343 23 358 3.74e-41 147
MS.gene99375.t1 AT1G62380 31.250 256 138 7 64 286 4 254 2.92e-39 141
MS.gene99375.t1 AT1G12010 31.250 256 138 7 64 286 4 254 2.28e-38 139
MS.gene99375.t1 AT1G05010 32.432 259 138 6 66 291 3 257 3.44e-38 139
MS.gene99375.t1 AT3G51240 31.650 297 154 7 39 293 10 299 5.80e-38 139
MS.gene99375.t1 AT1G77330 29.703 303 155 11 65 325 1 287 1.39e-37 137
MS.gene99375.t1 AT3G21420 30.473 338 176 12 33 323 17 342 2.55e-37 137
MS.gene99375.t1 AT4G16330 33.945 218 129 5 126 339 48 254 1.18e-36 133
MS.gene99375.t1 AT4G21200 30.000 290 156 7 65 323 40 313 2.18e-36 134
MS.gene99375.t1 AT3G19010 29.464 336 162 11 67 343 28 347 5.57e-36 134
MS.gene99375.t1 AT3G19010 29.464 336 162 11 67 343 28 347 5.57e-36 134
MS.gene99375.t1 AT3G19000 30.040 253 122 7 58 257 19 269 4.68e-35 129
MS.gene99375.t1 AT1G78550 33.632 223 136 5 126 343 63 278 2.62e-34 127
MS.gene99375.t1 AT3G55970 29.674 337 182 13 33 323 14 341 4.14e-34 129
MS.gene99375.t1 AT4G22880 26.822 343 197 9 33 328 7 342 4.96e-34 128
MS.gene99375.t1 AT4G22880 26.822 343 197 9 33 328 7 342 4.96e-34 128
MS.gene99375.t1 AT4G22880 26.822 343 197 9 33 328 7 342 4.96e-34 128
MS.gene99375.t1 AT2G44800 28.652 356 184 12 19 325 2 336 6.53e-34 128
MS.gene99375.t1 AT1G15550 31.935 310 147 13 66 332 56 344 2.34e-33 127
MS.gene99375.t1 AT1G50960 29.605 304 168 8 54 325 27 316 2.45e-33 126
MS.gene99375.t1 AT5G08640 26.885 305 169 8 66 330 42 332 1.80e-31 121
MS.gene99375.t1 AT5G08640 26.885 305 169 8 66 330 42 332 1.80e-31 121
MS.gene99375.t1 AT3G19010 31.629 313 155 15 67 343 28 317 3.95e-31 120
MS.gene99375.t1 AT4G25420 27.848 316 174 6 60 332 54 358 4.53e-31 121
MS.gene99375.t1 AT5G05600 29.032 279 157 8 19 257 13 290 8.30e-31 118
MS.gene99375.t1 AT3G60290 29.032 310 158 9 60 325 45 336 3.65e-30 118
MS.gene99375.t1 AT4G25300 35.354 198 119 5 148 343 72 262 1.16e-29 114
MS.gene99375.t1 AT5G63590 29.032 310 146 10 63 319 10 298 1.54e-29 115
MS.gene99375.t1 AT1G80330 29.299 314 150 10 66 329 48 339 2.41e-29 115
MS.gene99375.t1 AT3G51240 39.073 151 89 2 145 293 66 215 2.54e-29 114
MS.gene99375.t1 AT4G25310 27.083 336 174 9 42 343 27 325 4.07e-29 114
MS.gene99375.t1 AT2G19590 30.112 269 143 10 59 291 3 262 1.57e-28 112
MS.gene99375.t1 AT1G60980 26.829 328 173 8 65 341 55 366 4.85e-28 112
MS.gene99375.t1 AT5G20400 27.796 313 177 9 65 339 43 344 5.64e-28 112
MS.gene99375.t1 AT1G80340 27.508 309 166 8 60 327 43 334 7.91e-28 111
MS.gene99375.t1 AT5G63600 25.000 308 169 9 63 329 29 315 5.16e-27 108
MS.gene99375.t1 AT3G47190 28.383 303 148 10 54 304 18 303 5.21e-27 109
MS.gene99375.t1 AT3G55970 29.682 283 146 12 33 268 14 290 8.78e-27 107
MS.gene99375.t1 AT5G07480 26.861 309 159 10 67 325 44 335 5.15e-26 107
MS.gene99375.t1 AT5G12270 27.493 371 204 15 20 343 7 359 5.24e-26 107
MS.gene99375.t1 AT5G63600 24.919 309 169 10 63 329 29 316 7.81e-26 105
MS.gene99375.t1 AT4G25420 29.150 247 129 4 60 263 54 297 9.46e-26 105
MS.gene99375.t1 AT5G07200 27.341 267 148 5 65 287 56 320 1.63e-25 105
MS.gene99375.t1 AT5G51810 27.331 311 168 8 65 332 61 356 2.32e-25 105
MS.gene99375.t1 AT3G19010 27.843 255 120 7 67 266 28 273 1.84e-24 101
MS.gene99375.t1 AT1G44090 28.990 307 157 10 64 322 60 353 2.63e-24 102
MS.gene99375.t1 AT5G20550 27.184 309 170 11 54 319 31 327 4.31e-24 101
MS.gene99375.t1 AT4G21690 29.617 287 139 13 89 324 59 333 6.22e-24 100
MS.gene99375.t1 AT1G30040 26.524 328 160 13 66 343 30 326 9.45e-24 100
MS.gene99375.t1 AT1G49390 26.518 313 181 10 65 339 43 344 1.71e-23 99.8
MS.gene99375.t1 AT1G78440 27.362 307 161 13 67 328 18 307 6.08e-23 97.8
MS.gene99375.t1 AT5G63595 26.446 242 123 6 63 271 21 240 8.36e-23 96.7
MS.gene99375.t1 AT5G54000 26.263 297 170 9 65 322 44 330 9.60e-23 97.8
MS.gene99375.t1 AT5G51810 29.707 239 119 5 65 260 61 293 1.05e-22 96.7
MS.gene99375.t1 AT5G07480 30.526 190 117 6 143 325 45 226 2.47e-20 89.0
MS.gene99375.t1 AT5G58660 35.065 154 88 4 146 291 159 308 2.51e-20 90.9
MS.gene99375.t1 AT1G49390 28.182 220 143 7 126 339 55 265 3.22e-20 89.4
MS.gene99375.t1 AT2G19590 30.396 227 117 9 101 291 26 247 3.52e-20 89.7
MS.gene99375.t1 AT5G54000 30.220 182 118 5 143 322 76 250 6.60e-20 88.6
MS.gene99375.t1 AT4G23340 28.387 310 157 12 63 327 6 295 7.87e-20 89.0
MS.gene99375.t1 AT2G34555 26.115 314 154 12 67 329 27 313 2.31e-19 87.8
MS.gene99375.t1 AT1G47990 27.483 302 157 13 67 323 15 299 2.23e-17 82.0
MS.gene99375.t1 AT3G46490 25.369 339 176 10 54 332 3 324 3.03e-17 82.0
MS.gene99375.t1 AT3G46500 26.220 328 174 12 54 329 3 314 4.52e-17 81.3
MS.gene99375.t1 AT4G16765 29.064 203 127 6 136 329 47 241 4.53e-17 80.1
MS.gene99375.t1 AT4G16765 29.064 203 127 6 136 329 47 241 4.53e-17 80.1
MS.gene99375.t1 AT4G16765 29.064 203 127 6 136 329 47 241 4.53e-17 80.1
MS.gene99375.t1 AT1G35190 26.888 331 146 15 61 332 3 296 8.85e-17 80.1
MS.gene99375.t1 AT5G63580 25.316 237 118 6 66 257 18 240 1.08e-16 79.0
MS.gene99375.t1 AT5G63580 25.751 233 114 6 66 253 18 236 1.22e-16 79.0
MS.gene99375.t1 AT5G43935 23.377 308 155 11 67 330 19 289 1.66e-16 79.3
MS.gene99375.t1 AT4G23340 32.967 182 107 7 154 327 3 177 3.29e-16 76.6
MS.gene99375.t1 AT1G35190 26.627 338 161 14 61 332 3 319 4.58e-16 78.6
MS.gene99375.t1 AT1G02400 26.019 319 180 14 66 342 23 327 6.45e-16 77.8
MS.gene99375.t1 AT3G46500 29.348 184 114 5 154 329 3 178 2.56e-15 73.9
MS.gene99375.t1 AT3G46500 28.643 199 125 6 139 329 51 240 4.78e-15 74.3
MS.gene99375.t1 AT3G46500 28.643 199 125 6 139 329 51 240 4.78e-15 74.3
MS.gene99375.t1 AT4G16765 34.109 129 72 4 206 329 75 195 6.75e-15 72.8
MS.gene99375.t1 AT2G06960 37.313 134 63 5 197 330 33 145 1.06e-14 70.9
MS.gene99375.t1 AT4G16765 29.630 189 116 6 136 315 47 227 1.15e-14 72.8
MS.gene99375.t1 AT5G58660 34.167 120 67 4 146 257 159 274 8.66e-14 71.2
MS.gene99375.t1 AT3G46480 32.061 131 76 3 207 332 155 277 1.10e-13 70.9
MS.gene99375.t1 AT1G52820 27.041 196 133 5 148 341 127 314 1.70e-11 64.7

Find 60 sgRNAs with CRISPR-Local

Find 102 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AATCATTAGCTTCCTCTAAT+TGG 0.221971 5.1:+69333296 None:intergenic
AAGAATTGCCTCAAGTATTT+AGG 0.231549 5.1:-69332793 MS.gene99375:intron
TGAGGCAATTCTTCTGGTTT+TGG 0.234939 5.1:+69332803 None:intergenic
GTCTTGGATGAGATGATTAA+TGG 0.307431 5.1:-69332983 MS.gene99375:CDS
GAAGTTTCATCAAAGATTTA+TGG 0.309751 5.1:-69331674 MS.gene99375:CDS
AATACTTGAGGCAATTCTTC+TGG 0.322461 5.1:+69332797 None:intergenic
AAGAAAATCCACCAGTCTAT+AGG 0.322522 5.1:-69331628 MS.gene99375:CDS
TCTGATGTCAGTTCCTTGAT+AGG 0.338133 5.1:+69331650 None:intergenic
ATCTCATCCAAGACATTAAT+AGG 0.339754 5.1:+69332992 None:intergenic
GCTTCCTCTAATTGGTTTGT+TGG 0.363296 5.1:+69333304 None:intergenic
TCCTGAACCAGAGTTAACTA+TGG 0.366026 5.1:-69332301 MS.gene99375:CDS
AGAAAATCCACCAGTCTATA+GGG 0.381819 5.1:-69331627 MS.gene99375:CDS
TGGAATTCCTATTAATGTCT+TGG 0.396054 5.1:-69332999 MS.gene99375:CDS
CCCATAGTTAACTCTGGTTC+AGG 0.399949 5.1:+69332300 None:intergenic
AAGTTCTTCATGAGAATCAA+TGG 0.405916 5.1:-69332212 MS.gene99375:CDS
TCGATCCAACTTGAGTATTC+CGG 0.418237 5.1:-69333134 MS.gene99375:CDS
TTCTTCCAGGTGATTAATCA+TGG 0.428736 5.1:-69333019 MS.gene99375:CDS
GAGTTATTGTCAGAGGCTCT+TGG 0.433628 5.1:-69332399 MS.gene99375:CDS
GCTATTTGGAGAGACTCTTT+CGG 0.433768 5.1:-69332848 MS.gene99375:CDS
GTCTTGCCACCAAGTCATAA+AGG 0.444437 5.1:-69331746 MS.gene99375:CDS
ATCTTTGATGAAACTTCAGT+TGG 0.445378 5.1:+69331680 None:intergenic
TTTCGTCAGTGTTTATCATC+GGG 0.458703 5.1:-69331768 MS.gene99375:CDS
GAAACCAACAAACCAATTAG+AGG 0.462049 5.1:-69333308 MS.gene99375:CDS
CTTGGTCCTTTATGACTTGG+TGG 0.465957 5.1:+69331740 None:intergenic
TCATAAAGGACCAAGAGTTT+CGG 0.474992 5.1:-69331732 MS.gene99375:CDS
GAATCGAAAGCTGGTGTAAG+AGG 0.475343 5.1:-69333235 MS.gene99375:CDS
GAACTTGAAGACCACCAATC+TGG 0.479431 5.1:+69332229 None:intergenic
ACTCTTGGTCCTTTATGACT+TGG 0.484558 5.1:+69331737 None:intergenic
CATAAAAGTTGCAGAATACA+TGG 0.494667 5.1:-69331603 MS.gene99375:CDS
ATTTCGTCAGTGTTTATCAT+CGG 0.496785 5.1:-69331769 MS.gene99375:CDS
TCTGTACCCATAGTTAACTC+TGG 0.498596 5.1:+69332294 None:intergenic
GCATGATGGAAGCTCTAAGT+TGG 0.506991 5.1:-69331561 MS.gene99375:CDS
TGTTTATTTCACAACTTGAA+AGG 0.507400 5.1:+69331536 None:intergenic
AGTTCTTCATGAGAATCAAT+GGG 0.512480 5.1:-69332211 MS.gene99375:CDS
CAATCATGCTATGCGTATTG+AGG 0.519638 5.1:-69333080 MS.gene99375:CDS
AAAGATTTATGGTCCTATCA+AGG 0.521209 5.1:-69331663 MS.gene99375:CDS
GCTATGCGTATTGAGGTAAT+CGG 0.522096 5.1:-69333073 MS.gene99375:CDS
GTTAACTCTGGTTCAGGACA+TGG 0.527310 5.1:+69332306 None:intergenic
ACCTTTGATGAATCGAAAGC+TGG 0.535722 5.1:-69333244 MS.gene99375:CDS
GAATTCCATGATTAATCACC+TGG 0.536258 5.1:+69333014 None:intergenic
AAACTAGCTACCGAAACTCT+TGG 0.537755 5.1:+69331722 None:intergenic
GTTAATGTTCCTCCTCTGCA+TGG 0.540079 5.1:-69332189 MS.gene99375:CDS
TTTATGTCCCTATAGACTGG+TGG 0.549958 5.1:+69331620 None:intergenic
TATGACCGGAATACTCAAGT+TGG 0.552151 5.1:+69333129 None:intergenic
ACCAGCTTTCGATTCATCAA+AGG 0.554563 5.1:+69333243 None:intergenic
AAAGAATTGAGTTGTGCTGA+AGG 0.563547 5.1:-69332357 MS.gene99375:CDS
GTAAGAGGTCTTATAGAGTC+CGG 0.564520 5.1:-69333220 MS.gene99375:CDS
GGAGCTCTTGTTGTCAACAT+AGG 0.565427 5.1:-69332168 MS.gene99375:CDS
GCGTGGAATCTTTGTTACAC+CGG 0.579338 5.1:+69333201 None:intergenic
TCCAAGAAAATAATGTCACT+CGG 0.595147 5.1:-69332435 MS.gene99375:CDS
CCTGAACCAGAGTTAACTAT+GGG 0.596970 5.1:-69332300 MS.gene99375:CDS
AAATAATACCTAAATACTTG+AGG 0.619921 5.1:+69332785 None:intergenic
CAGTGTTGTTCAATGTGTCA+CGG 0.634706 5.1:+69333170 None:intergenic
ATGTCTTTGAGATCTATGAC+CGG 0.638913 5.1:+69333115 None:intergenic
ACAAGAGCTCCATGCAGAGG+AGG 0.640397 5.1:+69332180 None:intergenic
GTGTCACGGTAGAACATGCG+TGG 0.641455 5.1:+69333184 None:intergenic
AAAATGCATGCAAAGATTGG+GGG 0.645357 5.1:-69333042 MS.gene99375:CDS
ACAACAAGAGCTCCATGCAG+AGG 0.648271 5.1:+69332177 None:intergenic
AGACTCTTTCGGATGTACCA+TGG 0.657123 5.1:-69332837 MS.gene99375:CDS
AACTCTGGTTCAGGACATGG+CGG 0.690066 5.1:+69332309 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTATTTATTATTCCAATAT+TGG - chr5.1:69331970-69331989 MS.gene99375:intron 10.0%
!! ATTTCAATTATATAAACTAA+AGG - chr5.1:69332315-69332334 MS.gene99375:CDS 10.0%
!!! CATATTTTAAACTTTTATTT+TGG - chr5.1:69332341-69332360 MS.gene99375:CDS 10.0%
!!! TATTTTAAACTTTTATTTTG+GGG - chr5.1:69332343-69332362 MS.gene99375:CDS 10.0%
!!! TTTTTTTTAAAATAGTTTAG+TGG - chr5.1:69332129-69332148 MS.gene99375:intron 10.0%
!! TTTGAAAATTAAAAAATTGC+GGG - chr5.1:69332201-69332220 MS.gene99375:CDS 15.0%
!!! CTTTGAAAATTAAAAAATTG+CGG - chr5.1:69332200-69332219 MS.gene99375:CDS 15.0%
!!! TACTATAGACTTTTTTTTTT+TGG - chr5.1:69332745-69332764 MS.gene99375:intron 15.0%
!!! TTTACAAGTAAAGTATTTAA+TGG - chr5.1:69332721-69332740 MS.gene99375:intron 15.0%
!! AAATAATACCTAAATACTTG+AGG + chr5.1:69332078-69332097 None:intergenic 20.0%
!!! TAATTTTCTTTGTCAAATCA+CGG + chr5.1:69331954-69331973 None:intergenic 20.0%
! ATGTAGAAAAATCTGCTATT+TGG - chr5.1:69331998-69332017 MS.gene99375:intron 25.0%
! GAAGTTTCATCAAAGATTTA+TGG - chr5.1:69333186-69333205 MS.gene99375:CDS 25.0%
! TAAAAATGCATGCAAAGATT+GGG - chr5.1:69331816-69331835 MS.gene99375:intron 25.0%
! TTAAAAATGCATGCAAAGAT+TGG - chr5.1:69331815-69331834 MS.gene99375:intron 25.0%
! TTCTACATACAAACCAATAT+TGG + chr5.1:69331986-69332005 None:intergenic 25.0%
!! TTCAACTTTTCTATCATAAC+TGG + chr5.1:69331590-69331609 None:intergenic 25.0%
!!! ATGAGTTTTATTAGTAGTAC+TGG - chr5.1:69332282-69332301 MS.gene99375:CDS 25.0%
!!! TATTACTATTGCACTTTTTG+AGG - chr5.1:69332887-69332906 MS.gene99375:intron 25.0%
AAAAATGCATGCAAAGATTG+GGG - chr5.1:69331817-69331836 MS.gene99375:intron 30.0%
AAAGATTTATGGTCCTATCA+AGG - chr5.1:69333197-69333216 MS.gene99375:CDS 30.0%
AAGAATTGCCTCAAGTATTT+AGG - chr5.1:69332067-69332086 MS.gene99375:intron 30.0%
AAGTTCTTCATGAGAATCAA+TGG - chr5.1:69332648-69332667 MS.gene99375:intron 30.0%
AGATGATTAATGGAATTCGT+AGG - chr5.1:69331887-69331906 MS.gene99375:intron 30.0%
AGTTCTTCATGAGAATCAAT+GGG - chr5.1:69332649-69332668 MS.gene99375:intron 30.0%
ATCTCATCCAAGACATTAAT+AGG + chr5.1:69331871-69331890 None:intergenic 30.0%
ATCTTTGATGAAACTTCAGT+TGG + chr5.1:69333183-69333202 None:intergenic 30.0%
ATTTCGTCAGTGTTTATCAT+CGG - chr5.1:69333091-69333110 MS.gene99375:CDS 30.0%
CATAAAAGTTGCAGAATACA+TGG - chr5.1:69333257-69333276 MS.gene99375:CDS 30.0%
TCCAAGAAAATAATGTCACT+CGG - chr5.1:69332425-69332444 MS.gene99375:CDS 30.0%
TGGAATTCCTATTAATGTCT+TGG - chr5.1:69331861-69331880 MS.gene99375:intron 30.0%
TTGATATCTTAAGAGCTCTA+GGG + chr5.1:69332240-69332259 None:intergenic 30.0%
TTTGATATCTTAAGAGCTCT+AGG + chr5.1:69332241-69332260 None:intergenic 30.0%
! AATCATTAGCTTCCTCTAAT+TGG + chr5.1:69331567-69331586 None:intergenic 30.0%
! ATACTTTTACAAGACCAGAT+TGG - chr5.1:69332617-69332636 MS.gene99375:intron 30.0%
!!! ACTTTTTGAGTTATTGTCAG+AGG - chr5.1:69332454-69332473 MS.gene99375:CDS 30.0%
!!! ATGGACAATCGTTTTAAGAA+GGG - chr5.1:69333276-69333295 MS.gene99375:CDS 30.0%
!!! CTTTGCATGCATTTTTAAGT+TGG + chr5.1:69331813-69331832 None:intergenic 30.0%
AAAATGCATGCAAAGATTGG+GGG - chr5.1:69331818-69331837 MS.gene99375:intron 35.0%
AAGAAAATCCACCAGTCTAT+AGG - chr5.1:69333232-69333251 MS.gene99375:CDS 35.0%
AATACTTGAGGCAATTCTTC+TGG + chr5.1:69332066-69332085 None:intergenic 35.0%
AGAAAATCCACCAGTCTATA+GGG - chr5.1:69333233-69333252 MS.gene99375:CDS 35.0%
ATGAACAAGACGTTGTTGAA+AGG - chr5.1:69331914-69331933 MS.gene99375:intron 35.0%
GAAACCAACAAACCAATTAG+AGG - chr5.1:69331552-69331571 MS.gene99375:CDS 35.0%
GAATTCCATGATTAATCACC+TGG + chr5.1:69331849-69331868 None:intergenic 35.0%
GTCTTGGATGAGATGATTAA+TGG - chr5.1:69331877-69331896 MS.gene99375:intron 35.0%
GTTTGAGTAAGTGATCTGAA+AGG - chr5.1:69332929-69332948 MS.gene99375:intron 35.0%
TCATAAAGGACCAAGAGTTT+CGG - chr5.1:69333128-69333147 MS.gene99375:CDS 35.0%
TTCTTCCAGGTGATTAATCA+TGG - chr5.1:69331841-69331860 MS.gene99375:intron 35.0%
TTTCGTCAGTGTTTATCATC+GGG - chr5.1:69333092-69333111 MS.gene99375:CDS 35.0%
! AAAGAATTGAGTTGTGCTGA+AGG - chr5.1:69332503-69332522 MS.gene99375:intron 35.0%
! ACTTTTATGTCCCTATAGAC+TGG + chr5.1:69333246-69333265 None:intergenic 35.0%
! CAGCACAACTCAATTCTTTT+AGG + chr5.1:69332502-69332521 None:intergenic 35.0%
! GCTGAAGGACTTTTTATTCA+AGG - chr5.1:69332518-69332537 MS.gene99375:intron 35.0%
! TCCGAGTGACATTATTTTCT+TGG + chr5.1:69332429-69332448 None:intergenic 35.0%
!! ATGTCTTTGAGATCTATGAC+CGG + chr5.1:69331748-69331767 None:intergenic 35.0%
!!! CATGGACAATCGTTTTAAGA+AGG - chr5.1:69333275-69333294 MS.gene99375:CDS 35.0%
!!! TGGACAATCGTTTTAAGAAG+GGG - chr5.1:69333277-69333296 MS.gene99375:CDS 35.0%
AAACTAGCTACCGAAACTCT+TGG + chr5.1:69333141-69333160 None:intergenic 40.0%
ACCAGCTTTCGATTCATCAA+AGG + chr5.1:69331620-69331639 None:intergenic 40.0%
ACCTTTGATGAATCGAAAGC+TGG - chr5.1:69331616-69331635 MS.gene99375:CDS 40.0%
ACTAGTCCAGACTCATTTAG+TGG + chr5.1:69332970-69332989 None:intergenic 40.0%
ACTCTTGGTCCTTTATGACT+TGG + chr5.1:69333126-69333145 None:intergenic 40.0%
CAATCATGCTATGCGTATTG+AGG - chr5.1:69331780-69331799 MS.gene99375:CDS 40.0%
CCTGAACCAGAGTTAACTAT+GGG - chr5.1:69332560-69332579 MS.gene99375:intron 40.0%
GCTATGCGTATTGAGGTAAT+CGG - chr5.1:69331787-69331806 MS.gene99375:CDS 40.0%
GCTATTTGGAGAGACTCTTT+CGG - chr5.1:69332012-69332031 MS.gene99375:intron 40.0%
GTACTACCACTAAATGAGTC+TGG - chr5.1:69332961-69332980 MS.gene99375:intron 40.0%
TATGACCGGAATACTCAAGT+TGG + chr5.1:69331734-69331753 None:intergenic 40.0%
TCCTGAACCAGAGTTAACTA+TGG - chr5.1:69332559-69332578 MS.gene99375:intron 40.0%
TCGATCCAACTTGAGTATTC+CGG - chr5.1:69331726-69331745 MS.gene99375:CDS 40.0%
TCTGATGTCAGTTCCTTGAT+AGG + chr5.1:69333213-69333232 None:intergenic 40.0%
TCTGTACCCATAGTTAACTC+TGG + chr5.1:69332569-69332588 None:intergenic 40.0%
TTTATGTCCCTATAGACTGG+TGG + chr5.1:69333243-69333262 None:intergenic 40.0%
! CAGTGTTGTTCAATGTGTCA+CGG + chr5.1:69331693-69331712 None:intergenic 40.0%
! CTTTTACAAGACCAGATTGG+TGG - chr5.1:69332620-69332639 MS.gene99375:intron 40.0%
! GTAAGAGGTCTTATAGAGTC+CGG - chr5.1:69331640-69331659 MS.gene99375:CDS 40.0%
!! GCTTCCTCTAATTGGTTTGT+TGG + chr5.1:69331559-69331578 None:intergenic 40.0%
!!! TCTTCTGGTTTTGGTGGATT+AGG + chr5.1:69332051-69332070 None:intergenic 40.0%
!!! TGAGGCAATTCTTCTGGTTT+TGG + chr5.1:69332060-69332079 None:intergenic 40.0%
AGACTCTTTCGGATGTACCA+TGG - chr5.1:69332023-69332042 MS.gene99375:intron 45.0%
GAACTTGAAGACCACCAATC+TGG + chr5.1:69332634-69332653 None:intergenic 45.0%
GAATCGAAAGCTGGTGTAAG+AGG - chr5.1:69331625-69331644 MS.gene99375:CDS 45.0%
GAGTTATTGTCAGAGGCTCT+TGG - chr5.1:69332461-69332480 MS.gene99375:intron 45.0%
GCGTGGAATCTTTGTTACAC+CGG + chr5.1:69331662-69331681 None:intergenic 45.0%
GTCTTGCCACCAAGTCATAA+AGG - chr5.1:69333114-69333133 MS.gene99375:CDS 45.0%
GTTAATGTTCCTCCTCTGCA+TGG - chr5.1:69332671-69332690 MS.gene99375:intron 45.0%
! CCCATAGTTAACTCTGGTTC+AGG + chr5.1:69332563-69332582 None:intergenic 45.0%
! CTTGGTCCTTTATGACTTGG+TGG + chr5.1:69333123-69333142 None:intergenic 45.0%
! GGAGCTCTTGTTGTCAACAT+AGG - chr5.1:69332692-69332711 MS.gene99375:intron 45.0%
! GTTAACTCTGGTTCAGGACA+TGG + chr5.1:69332557-69332576 None:intergenic 45.0%
!! GCATGATGGAAGCTCTAAGT+TGG - chr5.1:69333299-69333318 MS.gene99375:CDS 45.0%
!!! CGTTTTAAGAAGGGGCATGA+TGG - chr5.1:69333285-69333304 MS.gene99375:CDS 45.0%
!!! GGCAATTCTTCTGGTTTTGG+TGG + chr5.1:69332057-69332076 None:intergenic 45.0%
!!! TTTTGGTGGATTAGGAGCCA+TGG + chr5.1:69332043-69332062 None:intergenic 45.0%
!!! ATATTTTAAACTTTTATTTT+GGG - chr5.1:69332342-69332361 MS.gene99375:CDS 5.0%
ACAACAAGAGCTCCATGCAG+AGG + chr5.1:69332686-69332705 None:intergenic 50.0%
CAAAGATTGGGGGTTCTTCC+AGG - chr5.1:69331828-69331847 MS.gene99375:intron 50.0%
! AACTCTGGTTCAGGACATGG+CGG + chr5.1:69332554-69332573 None:intergenic 50.0%
ACAAGAGCTCCATGCAGAGG+AGG + chr5.1:69332683-69332702 None:intergenic 55.0%
GTGTCACGGTAGAACATGCG+TGG + chr5.1:69331679-69331698 None:intergenic 55.0%
!! CTTAAGAGCTCTAGGGACGC+AGG + chr5.1:69332233-69332252 None:intergenic 55.0%


Chromosome Type Strat End Strand Name
chr5.1 gene 69331544 69333338 69331544 ID=MS.gene99375
chr5.1 mRNA 69331544 69333338 69331544 ID=MS.gene99375.t1;Parent=MS.gene99375
chr5.1 exon 69332978 69333338 69332978 ID=MS.gene99375.t1.exon1;Parent=MS.gene99375.t1
chr5.1 CDS 69332978 69333338 69332978 ID=cds.MS.gene99375.t1;Parent=MS.gene99375.t1
chr5.1 exon 69332794 69332878 69332794 ID=MS.gene99375.t1.exon2;Parent=MS.gene99375.t1
chr5.1 CDS 69332794 69332878 69332794 ID=cds.MS.gene99375.t1;Parent=MS.gene99375.t1
chr5.1 exon 69332155 69332476 69332155 ID=MS.gene99375.t1.exon3;Parent=MS.gene99375.t1
chr5.1 CDS 69332155 69332476 69332155 ID=cds.MS.gene99375.t1;Parent=MS.gene99375.t1
chr5.1 exon 69331544 69331807 69331544 ID=MS.gene99375.t1.exon4;Parent=MS.gene99375.t1
chr5.1 CDS 69331544 69331807 69331544 ID=cds.MS.gene99375.t1;Parent=MS.gene99375.t1
Gene Sequence

>MS.gene99375

ATGATGGTGAAACCAACAAACCAATTAGAGGAAGCTAATGATTCCAGTTATGATAGAAAAGTTGAAGTGACAACCTTTGATGAATCGAAAGCTGGTGTAAGAGGTCTTATAGAGTCCGGTGTAACAAAGATTCCACGCATGTTCTACCGTGACACATTGAACAACACTGAACATTTAGTCAATCGATCCAACTTGAGTATTCCGGTCATAGATCTCAAAGACATACACAACAATATCAATCATGCTATGCGTATTGAGGTAATCGGCCAACTTAAAAATGCATGCAAAGATTGGGGGTTCTTCCAGGTGATTAATCATGGAATTCCTATTAATGTCTTGGATGAGATGATTAATGGAATTCGTAGGTTTCATGAACAAGACGTTGTTGAAAGGAAAAAATTTTACAACCGTGATTTGACAAAGAAAATTATTTATTATTCCAATATTGGTTTGTATGTAGAAAAATCTGCTATTTGGAGAGACTCTTTCGGATGTACCATGGCTCCTAATCCACCAAAACCAGAAGAATTGCCTCAAGTATTTAGGTATTATTTTTAAATTATTTATTATAATTACAAGACAATTTTTTTTTTAAAATAGTTTAGTGGCAAAATTCTCATACACATTAAATGTTGAAAAGTTCTTTAAAACAAAAGCTTTGAAAATTAAAAAATTGCGGGTTTGAACCTGCGTCCCTAGAGCTCTTAAGATATCAAATCTTCTTAAACTCAATGTTTGATGAGTTTTATTAGTAGTACTGGTCACTTGTACATTTCAATTATATAAACTAAAGGTTTCATATTTTAAACTTTTATTTTGGGGAATATTTTAAACTTTTTACTAATTGTTTGTTTACATGCAGAGACATTATAATAGAATATTCCAAGAAAATAATGTCACTCGGATCTACACTTTTTGAGTTATTGTCAGAGGCTCTTGGCTTGAATTCATCTTACCTAAAAGAATTGAGTTGTGCTGAAGGACTTTTTATTCAAGGTCATTATTATCCGCCATGTCCTGAACCAGAGTTAACTATGGGTACAGACAAGCACGCTGATTCTAGCTTCATGACAATACTTTTACAAGACCAGATTGGTGGTCTTCAAGTTCTTCATGAGAATCAATGGGTTAATGTTCCTCCTCTGCATGGAGCTCTTGTTGTCAACATAGGAGATCTTTTACAAGTAAAGTATTTAATGGTTACTATAGACTTTTTTTTTTTGGTAATCTATATGCATTCTTTTTTATCATGATTGTTTTATTTTTCACAAAGCATACTCATATAAGAATTATAAGAAACTATAAAATTGAAAGAAAATGAAGTTCTTTGACTTTGCAATTGATATTACTATTGCACTTTTTGAGGTGTCAATTTAGCAATAAAAGTTTGAGTAAGTGATCTGAAAGGAATGAAATAGTACTACCACTAAATGAGTCTGGACTAGTACTATAAATATAAATATTTGCTCACATAGTTTATAAACAGCTTGTGTAAACTATATATTTATCAATTTCTTTGTTTTTGTTACAGCTTATAACAAATGACAATTTCGTCAGTGTTTATCATCGGGTCTTGCCACCAAGTCATAAAGGACCAAGAGTTTCGGTAGCTAGTTTCTTTGCAAATTCTCATGATCCAACTGAAGTTTCATCAAAGATTTATGGTCCTATCAAGGAACTGACATCAGAAGAAAATCCACCAGTCTATAGGGACATAAAAGTTGCAGAATACATGGACAATCGTTTTAAGAAGGGGCATGATGGAAGCTCTAAGTTGGAGCCTTTCAAGTTGTGA

Protein sequence

>MS.gene99375.t1

MMVKPTNQLEEANDSSYDRKVEVTTFDESKAGVRGLIESGVTKIPRMFYRDTLNNTEHLVNRSNLSIPVIDLKDIHNNINHAMRIEVIGQLKNACKDWGFFQVINHGIPINVLDEMINGIQKSAIWRDSFGCTMAPNPPKPEELPQVFRDIIIEYSKKIMSLGSTLFELLSEALGLNSSYLKELSCAEGLFIQGHYYPPCPEPELTMGTDKHADSSFMTILLQDQIGGLQVLHENQWVNVPPLHGALVVNIGDLLQLITNDNFVSVYHRVLPPSHKGPRVSVASFFANSHDPTEVSSKIYGPIKELTSEENPPVYRDIKVAEYMDNRFKKGHDGSSKLEPFKL