Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene068905.t1 | XP_003595391.1 | 95.1 | 122 | 6 | 0 | 29 | 150 | 45 | 166 | 5.80E-57 | 230.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene068905.t1 | P82195 | 83.9 | 124 | 20 | 0 | 27 | 150 | 43 | 166 | 1.3e-54 | 213.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene068905.t1 | A2Q3Y9 | 95.1 | 122 | 6 | 0 | 29 | 150 | 45 | 166 | 4.2e-57 | 230.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049260 | MS.gene068905 | 0.804241 | 2.37E-49 | -1.69E-46 |
| MS.gene049284 | MS.gene068905 | 0.819207 | 1.31E-52 | -1.69E-46 |
| MS.gene049346 | MS.gene068905 | 0.81093 | 9.02E-51 | -1.69E-46 |
| MS.gene049351 | MS.gene068905 | 0.884983 | 1.20E-71 | -1.69E-46 |
| MS.gene049389 | MS.gene068905 | 0.802974 | 4.35E-49 | -1.69E-46 |
| MS.gene049427 | MS.gene068905 | 0.841363 | 4.97E-58 | -1.69E-46 |
| MS.gene049491 | MS.gene068905 | 0.844477 | 7.38E-59 | -1.69E-46 |
| MS.gene049661 | MS.gene068905 | 0.861713 | 8.46E-64 | -1.69E-46 |
| MS.gene049662 | MS.gene068905 | 0.869408 | 3.17E-66 | -1.69E-46 |
| MS.gene049758 | MS.gene068905 | 0.868516 | 6.16E-66 | -1.69E-46 |
| MS.gene049760 | MS.gene068905 | 0.817704 | 2.87E-52 | -1.69E-46 |
| MS.gene050076 | MS.gene068905 | 0.862256 | 5.77E-64 | -1.69E-46 |
| MS.gene050099 | MS.gene068905 | 0.844825 | 5.95E-59 | -1.69E-46 |
| MS.gene050128 | MS.gene068905 | 0.817153 | 3.82E-52 | -1.69E-46 |
| MS.gene050231 | MS.gene068905 | 0.807658 | 4.54E-50 | -1.69E-46 |
| MS.gene050301 | MS.gene068905 | 0.905572 | 3.72E-80 | -1.69E-46 |
| MS.gene050397 | MS.gene068905 | 0.874276 | 7.67E-68 | -1.69E-46 |
| MS.gene050406 | MS.gene068905 | 0.809074 | 2.26E-50 | -1.69E-46 |
| MS.gene050432 | MS.gene068905 | 0.846841 | 1.69E-59 | -1.69E-46 |
| MS.gene050464 | MS.gene068905 | 0.866043 | 3.80E-65 | -1.69E-46 |
| MS.gene050529 | MS.gene068905 | 0.879808 | 9.21E-70 | -1.69E-46 |
| MS.gene050558 | MS.gene068905 | 0.812458 | 4.20E-51 | -1.69E-46 |
| MS.gene050670 | MS.gene068905 | 0.840795 | 7.01E-58 | -1.69E-46 |
| MS.gene050767 | MS.gene068905 | 0.823627 | 1.25E-53 | -1.69E-46 |
| MS.gene050770 | MS.gene068905 | 0.82479 | 6.67E-54 | -1.69E-46 |
| MS.gene050783 | MS.gene068905 | 0.831243 | 1.86E-55 | -1.69E-46 |
| MS.gene05101 | MS.gene068905 | 0.906195 | 1.92E-80 | -1.69E-46 |
| MS.gene05105 | MS.gene068905 | 0.820071 | 8.32E-53 | -1.69E-46 |
| MS.gene051387 | MS.gene068905 | 0.82339 | 1.42E-53 | -1.69E-46 |
| MS.gene051471 | MS.gene068905 | 0.855304 | 6.90E-62 | -1.69E-46 |
| MS.gene051582 | MS.gene068905 | 0.864181 | 1.46E-64 | -1.69E-46 |
| MS.gene051663 | MS.gene068905 | 0.820607 | 6.27E-53 | -1.69E-46 |
| MS.gene051860 | MS.gene068905 | 0.844941 | 5.54E-59 | -1.69E-46 |
| MS.gene051877 | MS.gene068905 | 0.848746 | 5.04E-60 | -1.69E-46 |
| MS.gene052011 | MS.gene068905 | -0.8084 | 3.16E-50 | -1.69E-46 |
| MS.gene052078 | MS.gene068905 | 0.878276 | 3.20E-69 | -1.69E-46 |
| MS.gene052178 | MS.gene068905 | 0.861043 | 1.35E-63 | -1.69E-46 |
| MS.gene052188 | MS.gene068905 | 0.828902 | 6.95E-55 | -1.69E-46 |
| MS.gene052207 | MS.gene068905 | 0.8507 | 1.43E-60 | -1.69E-46 |
| MS.gene052253 | MS.gene068905 | 0.845797 | 3.25E-59 | -1.69E-46 |
| MS.gene052287 | MS.gene068905 | 0.821134 | 4.74E-53 | -1.69E-46 |
| MS.gene052310 | MS.gene068905 | 0.870299 | 1.62E-66 | -1.69E-46 |
| MS.gene052322 | MS.gene068905 | 0.81354 | 2.43E-51 | -1.69E-46 |
| MS.gene052326 | MS.gene068905 | 0.876273 | 1.59E-68 | -1.69E-46 |
| MS.gene052340 | MS.gene068905 | 0.82362 | 1.26E-53 | -1.69E-46 |
| MS.gene052481 | MS.gene068905 | 0.829869 | 4.04E-55 | -1.69E-46 |
| MS.gene052484 | MS.gene068905 | 0.801248 | 9.85E-49 | -1.69E-46 |
| MS.gene052485 | MS.gene068905 | 0.840985 | 6.25E-58 | -1.69E-46 |
| MS.gene052917 | MS.gene068905 | -0.803526 | 3.34E-49 | -1.69E-46 |
| MS.gene053107 | MS.gene068905 | 0.842233 | 2.93E-58 | -1.69E-46 |
| MS.gene053209 | MS.gene068905 | 0.844929 | 5.57E-59 | -1.69E-46 |
| MS.gene053322 | MS.gene068905 | 0.843266 | 1.56E-58 | -1.69E-46 |
| MS.gene053557 | MS.gene068905 | 0.842567 | 2.39E-58 | -1.69E-46 |
| MS.gene053836 | MS.gene068905 | 0.891255 | 4.69E-74 | -1.69E-46 |
| MS.gene053907 | MS.gene068905 | 0.814626 | 1.40E-51 | -1.69E-46 |
| MS.gene053971 | MS.gene068905 | 0.834843 | 2.37E-56 | -1.69E-46 |
| MS.gene054010 | MS.gene068905 | 0.827667 | 1.38E-54 | -1.69E-46 |
| MS.gene054011 | MS.gene068905 | 0.835633 | 1.50E-56 | -1.69E-46 |
| MS.gene054012 | MS.gene068905 | 0.827932 | 1.19E-54 | -1.69E-46 |
| MS.gene054013 | MS.gene068905 | 0.824981 | 6.01E-54 | -1.69E-46 |
| MS.gene054123 | MS.gene068905 | 0.817919 | 2.57E-52 | -1.69E-46 |
| MS.gene054183 | MS.gene068905 | 0.803131 | 4.04E-49 | -1.69E-46 |
| MS.gene054214 | MS.gene068905 | 0.822409 | 2.41E-53 | -1.69E-46 |
| MS.gene054376 | MS.gene068905 | 0.855316 | 6.85E-62 | -1.69E-46 |
| MS.gene054473 | MS.gene068905 | 0.847707 | 9.75E-60 | -1.69E-46 |
| MS.gene05455 | MS.gene068905 | 0.874834 | 4.95E-68 | -1.69E-46 |
| MS.gene054802 | MS.gene068905 | 0.85164 | 7.78E-61 | -1.69E-46 |
| MS.gene054803 | MS.gene068905 | 0.848789 | 4.90E-60 | -1.69E-46 |
| MS.gene054804 | MS.gene068905 | 0.84965 | 2.82E-60 | -1.69E-46 |
| MS.gene054983 | MS.gene068905 | 0.808047 | 3.75E-50 | -1.69E-46 |
| MS.gene055116 | MS.gene068905 | 0.859155 | 5.03E-63 | -1.69E-46 |
| MS.gene055277 | MS.gene068905 | 0.916309 | 2.08E-85 | -1.69E-46 |
| MS.gene055303 | MS.gene068905 | 0.855 | 8.46E-62 | -1.69E-46 |
| MS.gene055390 | MS.gene068905 | 0.890408 | 1.01E-73 | -1.69E-46 |
| MS.gene055422 | MS.gene068905 | 0.894179 | 3.14E-75 | -1.69E-46 |
| MS.gene055428 | MS.gene068905 | 0.893719 | 4.84E-75 | -1.69E-46 |
| MS.gene055499 | MS.gene068905 | 0.83182 | 1.34E-55 | -1.69E-46 |
| MS.gene05553 | MS.gene068905 | 0.803369 | 3.60E-49 | -1.69E-46 |
| MS.gene055564 | MS.gene068905 | 0.862567 | 4.62E-64 | -1.69E-46 |
| MS.gene055604 | MS.gene068905 | 0.853945 | 1.71E-61 | -1.69E-46 |
| MS.gene055712 | MS.gene068905 | 0.841468 | 4.67E-58 | -1.69E-46 |
| MS.gene055896 | MS.gene068905 | 0.811302 | 7.49E-51 | -1.69E-46 |
| MS.gene05602 | MS.gene068905 | 0.803083 | 4.13E-49 | -1.69E-46 |
| MS.gene056191 | MS.gene068905 | 0.872747 | 2.51E-67 | -1.69E-46 |
| MS.gene056407 | MS.gene068905 | 0.871841 | 5.02E-67 | -1.69E-46 |
| MS.gene056410 | MS.gene068905 | 0.861175 | 1.23E-63 | -1.69E-46 |
| MS.gene056451 | MS.gene068905 | 0.803514 | 3.36E-49 | -1.69E-46 |
| MS.gene056452 | MS.gene068905 | 0.831811 | 1.35E-55 | -1.69E-46 |
| MS.gene056612 | MS.gene068905 | 0.880119 | 7.14E-70 | -1.69E-46 |
| MS.gene056723 | MS.gene068905 | 0.812217 | 4.74E-51 | -1.69E-46 |
| MS.gene056796 | MS.gene068905 | 0.851604 | 7.97E-61 | -1.69E-46 |
| MS.gene056846 | MS.gene068905 | 0.829648 | 4.58E-55 | -1.69E-46 |
| MS.gene056899 | MS.gene068905 | -0.806293 | 8.83E-50 | -1.69E-46 |
| MS.gene056902 | MS.gene068905 | 0.82239 | 2.43E-53 | -1.69E-46 |
| MS.gene056931 | MS.gene068905 | 0.822229 | 2.65E-53 | -1.69E-46 |
| MS.gene056933 | MS.gene068905 | 0.823714 | 1.19E-53 | -1.69E-46 |
| MS.gene056935 | MS.gene068905 | 0.823209 | 1.57E-53 | -1.69E-46 |
| MS.gene057011 | MS.gene068905 | 0.858393 | 8.50E-63 | -1.69E-46 |
| MS.gene05702 | MS.gene068905 | 0.869779 | 2.40E-66 | -1.69E-46 |
| MS.gene057121 | MS.gene068905 | 0.881285 | 2.73E-70 | -1.69E-46 |
| MS.gene057123 | MS.gene068905 | 0.805784 | 1.13E-49 | -1.69E-46 |
| MS.gene057129 | MS.gene068905 | 0.802398 | 5.72E-49 | -1.69E-46 |
| MS.gene057146 | MS.gene068905 | 0.837957 | 3.83E-57 | -1.69E-46 |
| MS.gene057245 | MS.gene068905 | 0.863789 | 1.94E-64 | -1.69E-46 |
| MS.gene057295 | MS.gene068905 | 0.812725 | 3.67E-51 | -1.69E-46 |
| MS.gene05733 | MS.gene068905 | 0.808063 | 3.72E-50 | -1.69E-46 |
| MS.gene057439 | MS.gene068905 | 0.835383 | 1.73E-56 | -1.69E-46 |
| MS.gene057448 | MS.gene068905 | 0.822596 | 2.18E-53 | -1.69E-46 |
| MS.gene057449 | MS.gene068905 | 0.821677 | 3.56E-53 | -1.69E-46 |
| MS.gene057450 | MS.gene068905 | 0.827504 | 1.51E-54 | -1.69E-46 |
| MS.gene057469 | MS.gene068905 | 0.805642 | 1.21E-49 | -1.69E-46 |
| MS.gene057749 | MS.gene068905 | 0.806213 | 9.18E-50 | -1.69E-46 |
| MS.gene057779 | MS.gene068905 | 0.816636 | 4.99E-52 | -1.69E-46 |
| MS.gene058002 | MS.gene068905 | 0.878226 | 3.33E-69 | -1.69E-46 |
| MS.gene058082 | MS.gene068905 | 0.819637 | 1.05E-52 | -1.69E-46 |
| MS.gene05811 | MS.gene068905 | 0.881103 | 3.17E-70 | -1.69E-46 |
| MS.gene058142 | MS.gene068905 | 0.816284 | 5.99E-52 | -1.69E-46 |
| MS.gene058233 | MS.gene068905 | 0.872787 | 2.43E-67 | -1.69E-46 |
| MS.gene058276 | MS.gene068905 | 0.820716 | 5.92E-53 | -1.69E-46 |
| MS.gene058293 | MS.gene068905 | 0.871636 | 5.88E-67 | -1.69E-46 |
| MS.gene058365 | MS.gene068905 | 0.804097 | 2.54E-49 | -1.69E-46 |
| MS.gene05842 | MS.gene068905 | 0.811223 | 7.80E-51 | -1.69E-46 |
| MS.gene058660 | MS.gene068905 | 0.925271 | 2.30E-90 | -1.69E-46 |
| MS.gene058787 | MS.gene068905 | 0.838931 | 2.14E-57 | -1.69E-46 |
| MS.gene058845 | MS.gene068905 | 0.825835 | 3.77E-54 | -1.69E-46 |
| MS.gene05886 | MS.gene068905 | 0.813376 | 2.64E-51 | -1.69E-46 |
| MS.gene05907 | MS.gene068905 | 0.892738 | 1.20E-74 | -1.69E-46 |
| MS.gene059141 | MS.gene068905 | 0.823141 | 1.63E-53 | -1.69E-46 |
| MS.gene059294 | MS.gene068905 | 0.855015 | 8.38E-62 | -1.69E-46 |
| MS.gene059326 | MS.gene068905 | 0.833403 | 5.44E-56 | -1.69E-46 |
| MS.gene059342 | MS.gene068905 | 0.802537 | 5.35E-49 | -1.69E-46 |
| MS.gene059420 | MS.gene068905 | 0.820016 | 8.57E-53 | -1.69E-46 |
| MS.gene059518 | MS.gene068905 | 0.852333 | 4.95E-61 | -1.69E-46 |
| MS.gene059536 | MS.gene068905 | 0.870641 | 1.25E-66 | -1.69E-46 |
| MS.gene059597 | MS.gene068905 | 0.841991 | 3.40E-58 | -1.69E-46 |
| MS.gene05959 | MS.gene068905 | 0.802225 | 6.21E-49 | -1.69E-46 |
| MS.gene059676 | MS.gene068905 | 0.846098 | 2.69E-59 | -1.69E-46 |
| MS.gene059688 | MS.gene068905 | 0.866018 | 3.87E-65 | -1.69E-46 |
| MS.gene059692 | MS.gene068905 | 0.865216 | 6.93E-65 | -1.69E-46 |
| MS.gene059695 | MS.gene068905 | 0.864762 | 9.63E-65 | -1.69E-46 |
| MS.gene059708 | MS.gene068905 | 0.802851 | 4.61E-49 | -1.69E-46 |
| MS.gene05984 | MS.gene068905 | 0.859947 | 2.91E-63 | -1.69E-46 |
| MS.gene059894 | MS.gene068905 | 0.849814 | 2.54E-60 | -1.69E-46 |
| MS.gene059960 | MS.gene068905 | 0.848089 | 7.65E-60 | -1.69E-46 |
| MS.gene059974 | MS.gene068905 | 0.802284 | 6.03E-49 | -1.69E-46 |
| MS.gene060005 | MS.gene068905 | 0.815402 | 9.42E-52 | -1.69E-46 |
| MS.gene06037 | MS.gene068905 | 0.862179 | 6.09E-64 | -1.69E-46 |
| MS.gene060403 | MS.gene068905 | 0.834365 | 3.13E-56 | -1.69E-46 |
| MS.gene060559 | MS.gene068905 | 0.830679 | 2.56E-55 | -1.69E-46 |
| MS.gene060804 | MS.gene068905 | 0.824407 | 8.21E-54 | -1.69E-46 |
| MS.gene06090 | MS.gene068905 | 0.824869 | 6.39E-54 | -1.69E-46 |
| MS.gene061049 | MS.gene068905 | 0.873089 | 1.93E-67 | -1.69E-46 |
| MS.gene061051 | MS.gene068905 | -0.847887 | 8.70E-60 | -1.69E-46 |
| MS.gene061154 | MS.gene068905 | 0.811921 | 5.50E-51 | -1.69E-46 |
| MS.gene061200 | MS.gene068905 | 0.83206 | 1.17E-55 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene068905.t1 | MTR_2g044920 | 95.082 | 122 | 6 | 0 | 29 | 150 | 45 | 166 | 2.31e-83 | 242 |
| MS.gene068905.t1 | MTR_2g044920 | 92.000 | 75 | 6 | 0 | 28 | 102 | 44 | 118 | 4.94e-46 | 147 |
| MS.gene068905.t1 | MTR_5g041290 | 34.586 | 133 | 83 | 2 | 17 | 148 | 34 | 163 | 3.80e-21 | 84.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene068905.t1 | AT1G48350 | 80.488 | 123 | 24 | 0 | 28 | 150 | 48 | 170 | 2.11e-70 | 209 |
| MS.gene068905.t1 | AT1G14205 | 39.344 | 122 | 70 | 2 | 28 | 148 | 49 | 167 | 8.07e-19 | 78.6 |
| MS.gene068905.t1 | AT3G17626 | 62.000 | 50 | 16 | 1 | 85 | 134 | 1 | 47 | 2.44e-13 | 61.2 |
Find 42 sgRNAs with CRISPR-Local
Find 319 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCAAAATCCTGTCTGGAAAT+AGG | 0.169851 | 2.1:+46012557 | MS.gene068905:CDS |
| CACAGACAATCTTGGTCTTT+CGG | 0.279312 | 2.1:-46011501 | None:intergenic |
| ACAGACAATCTTGGTCTTTC+GGG | 0.288767 | 2.1:-46011500 | None:intergenic |
| CAAAATCCTGTCTGGAAATA+GGG | 0.298158 | 2.1:+46012558 | MS.gene068905:CDS |
| TTCCCTTCGAGTAGTGGCTT+TGG | 0.404149 | 2.1:-46009571 | None:intergenic |
| TTGGACAAAGAGATGCTTGT+TGG | 0.418067 | 2.1:-46011531 | None:intergenic |
| GCTTTAACACGGCCATGGTA+TGG | 0.425794 | 2.1:-46012614 | None:intergenic |
| AATCATTGCAAAATCCTGTC+TGG | 0.467654 | 2.1:+46012550 | MS.gene068905:CDS |
| TATCAGGAACTTACAATTGT+AGG | 0.470527 | 2.1:-46011641 | None:intergenic |
| TGTGATCCCTATTTCCAGAC+AGG | 0.474164 | 2.1:-46012564 | None:intergenic |
| GCTGATGCGGCTCGCGAACA+TGG | 0.492801 | 2.1:+46012641 | MS.gene068905:CDS |
| ACTTGTCTTATTTGTTAACA+TGG | 0.494319 | 2.1:-46007485 | None:intergenic |
| GGACCTCTTCCACTCGTAGT+AGG | 0.494545 | 2.1:-46007550 | None:intergenic |
| GATCGAAACACAGACAATCT+TGG | 0.494991 | 2.1:-46011509 | None:intergenic |
| CCTTCTTTCTGATACGAACA+TGG | 0.507027 | 2.1:-46009608 | None:intergenic |
| CTTTAACACGGCCATGGTAT+GGG | 0.511001 | 2.1:-46012613 | None:intergenic |
| TCTGTCTTCCCTTCGAGTAG+TGG | 0.511964 | 2.1:-46009577 | None:intergenic |
| GAAGAGTTGAACTTCACCTC+TGG | 0.512553 | 2.1:+46011617 | MS.gene068905:CDS |
| CAACTCTGTCAGCAATCTGA+TGG | 0.520493 | 2.1:+46007525 | MS.gene068905:CDS |
| GATCCTACTACGAGTGGAAG+AGG | 0.534845 | 2.1:+46007547 | MS.gene068905:CDS |
| CCATGTTCGTATCAGAAAGA+AGG | 0.545328 | 2.1:+46009608 | MS.gene068905:CDS |
| TGTTAAAGCTATTGCTGATG+CGG | 0.547812 | 2.1:+46012628 | MS.gene068905:CDS |
| TCTTGGTGTCGTCAATCACT+TGG | 0.549933 | 2.1:-46011550 | None:intergenic |
| ACAAAGGTAGCCTTTGACAG+AGG | 0.569891 | 2.1:+46012584 | MS.gene068905:CDS |
| TGGGTAACCACCTCTGTCAA+AGG | 0.571658 | 2.1:-46012594 | None:intergenic |
| TGAAGCAAGTGTATGCATCT+TGG | 0.577835 | 2.1:-46011567 | None:intergenic |
| GCTTCAGGAAGTAGCAAAGA+GGG | 0.581508 | 2.1:+46012520 | MS.gene068905:intron |
| CATCAGATTGCTGACAGAGT+TGG | 0.583952 | 2.1:-46007524 | None:intergenic |
| TTCAGCTTCGACAATGCAGA+AGG | 0.586530 | 2.1:+46011586 | MS.gene068905:CDS |
| ATGTTAACAAATAAGACAAG+TGG | 0.596754 | 2.1:+46007487 | MS.gene068905:CDS |
| CTGATGGATCCTACTACGAG+TGG | 0.597885 | 2.1:+46007541 | MS.gene068905:CDS |
| AAGCCAAAGCCACTACTCGA+AGG | 0.598125 | 2.1:+46009568 | MS.gene068905:intron |
| AGCCAAAGCCACTACTCGAA+GGG | 0.612684 | 2.1:+46009569 | MS.gene068905:intron |
| AAGGTAGCCTTTGACAGAGG+TGG | 0.614954 | 2.1:+46012587 | MS.gene068905:CDS |
| CAATAGCTTTAACACGGCCA+TGG | 0.626600 | 2.1:-46012619 | None:intergenic |
| CATCAGCAATAGCTTTAACA+CGG | 0.627319 | 2.1:-46012625 | None:intergenic |
| TGCTTCAGGAAGTAGCAAAG+AGG | 0.655766 | 2.1:+46012519 | MS.gene068905:intron |
| TCAGGAAGTAGCAAAGAGGG+TGG | 0.657714 | 2.1:+46012523 | MS.gene068905:intron |
| CAGGAAGTAGCAAAGAGGGT+GGG | 0.658309 | 2.1:+46012524 | MS.gene068905:intron |
| ACTTACAATTGTAGGACCAG+AGG | 0.688517 | 2.1:-46011633 | None:intergenic |
| AGAGGTGGTTACCCATACCA+TGG | 0.695112 | 2.1:+46012602 | MS.gene068905:CDS |
| TCTGGAAATAGGGATCACAA+AGG | 0.730190 | 2.1:+46012568 | MS.gene068905:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAATTAATTAAATAAATAAA+AGG | - | chr2.1:46009232-46009251 | None:intergenic | 0.0% |
| !! | ATTTATTTGTTTGTAAATTA+TGG | + | chr2.1:46009682-46009701 | MS.gene068905:intron | 10.0% |
| !! | CAATTAAATTATTATCAATT+TGG | - | chr2.1:46010545-46010564 | None:intergenic | 10.0% |
| !! | TAAAAAAAAATTTCTTGATT+GGG | + | chr2.1:46010355-46010374 | MS.gene068905:intron | 10.0% |
| !! | TTAAAAAAAAATTTCTTGAT+TGG | + | chr2.1:46010354-46010373 | MS.gene068905:intron | 10.0% |
| !!! | ATTGATAATAATTTAATTGA+AGG | + | chr2.1:46010546-46010565 | MS.gene068905:intron | 10.0% |
| !!! | TTATTTAAAATTTTCTCTTT+TGG | + | chr2.1:46008140-46008159 | MS.gene068905:intron | 10.0% |
| !!! | TTGATAATAATTTAATTGAA+GGG | + | chr2.1:46010547-46010566 | MS.gene068905:intron | 10.0% |
| !! | AAATATAGATGTATATTTAC+AGG | - | chr2.1:46010723-46010742 | None:intergenic | 15.0% |
| !! | AATATATTAGTTATTACCAT+TGG | - | chr2.1:46012099-46012118 | None:intergenic | 15.0% |
| !! | ACAATTTATCAAAAGAATAA+TGG | + | chr2.1:46010307-46010326 | MS.gene068905:intron | 15.0% |
| !! | ATGTAACAAAATTAAAGAAA+AGG | + | chr2.1:46008637-46008656 | MS.gene068905:intron | 15.0% |
| !! | CGTAACAAAATTAATAAATA+AGG | + | chr2.1:46008781-46008800 | MS.gene068905:intron | 15.0% |
| !! | TACCAAAATCATTATTATTA+GGG | - | chr2.1:46008205-46008224 | None:intergenic | 15.0% |
| !! | TACTAGTTAGATTAATATTT+GGG | + | chr2.1:46009779-46009798 | MS.gene068905:intron | 15.0% |
| !! | TGTAACAAAATTAAAGAAAA+GGG | + | chr2.1:46008638-46008657 | MS.gene068905:intron | 15.0% |
| !! | TTAAAATTGAGGATATATAT+CGG | + | chr2.1:46008928-46008947 | MS.gene068905:intron | 15.0% |
| !! | TTACTAGTTAGATTAATATT+TGG | + | chr2.1:46009778-46009797 | MS.gene068905:intron | 15.0% |
| !!! | AAATCATTTTATGATTTTTC+AGG | + | chr2.1:46011466-46011485 | MS.gene068905:intron | 15.0% |
| !!! | TTTATTTTTGAAGGAAATTT+TGG | + | chr2.1:46008238-46008257 | MS.gene068905:intron | 15.0% |
| !!! | TTTTTTAGATGGAATTTTTT+AGG | + | chr2.1:46008552-46008571 | MS.gene068905:intron | 15.0% |
| !! | AAAACAAAATGATAGATACT+AGG | + | chr2.1:46007668-46007687 | MS.gene068905:intron | 20.0% |
| !! | AAAATAAGCACAAAATTCAT+TGG | + | chr2.1:46008884-46008903 | MS.gene068905:intron | 20.0% |
| !! | AGCAAACAATATACAATAAT+AGG | - | chr2.1:46010658-46010677 | None:intergenic | 20.0% |
| !! | AGTAGCTATTAATTATTATG+GGG | - | chr2.1:46012156-46012175 | None:intergenic | 20.0% |
| !! | ATCAAATTGATAAGAGATAA+GGG | - | chr2.1:46007574-46007593 | None:intergenic | 20.0% |
| !! | ATTTAATTGAAGGGTAAAAT+TGG | + | chr2.1:46010556-46010575 | MS.gene068905:intron | 20.0% |
| !! | CAGTAGCTATTAATTATTAT+GGG | - | chr2.1:46012157-46012176 | None:intergenic | 20.0% |
| !! | CTTATTATAAAAGTGAGAAA+AGG | - | chr2.1:46007795-46007814 | None:intergenic | 20.0% |
| !! | GAAATAAAAGAAAGTAACAA+AGG | + | chr2.1:46011242-46011261 | MS.gene068905:intron | 20.0% |
| !! | GTACCAAAATCATTATTATT+AGG | - | chr2.1:46008206-46008225 | None:intergenic | 20.0% |
| !! | TATAAGAGAAAACTTATATC+AGG | - | chr2.1:46011324-46011343 | None:intergenic | 20.0% |
| !! | TCAGTAGCTATTAATTATTA+TGG | - | chr2.1:46012158-46012177 | None:intergenic | 20.0% |
| !! | TCTTATATATAAAGAGATCA+TGG | + | chr2.1:46011337-46011356 | MS.gene068905:intron | 20.0% |
| !! | TTATAATAAGAGAAACGTAA+CGG | - | chr2.1:46011669-46011688 | None:intergenic | 20.0% |
| !!! | AATTTTCGTTTACTAAATGA+CGG | + | chr2.1:46012474-46012493 | MS.gene068905:intron | 20.0% |
| !!! | AGGAATTTTTATTATCATCA+GGG | - | chr2.1:46011751-46011770 | None:intergenic | 20.0% |
| !!! | ATATATCTTTCTTTGAAATC+TGG | - | chr2.1:46011864-46011883 | None:intergenic | 20.0% |
| !!! | ATTGTTGTTGATGTTTTTAT+TGG | + | chr2.1:46009949-46009968 | MS.gene068905:intron | 20.0% |
| !!! | CTGATTTTTGAGAATTTTAA+AGG | + | chr2.1:46009973-46009992 | MS.gene068905:intron | 20.0% |
| !!! | CTTGATAATGATAAAAGATA+CGG | + | chr2.1:46010944-46010963 | MS.gene068905:intron | 20.0% |
| !!! | CTTTTCTCACTTTTATAATA+AGG | + | chr2.1:46007793-46007812 | MS.gene068905:intron | 20.0% |
| !!! | CTTTTGTTAATTCTGTTATT+TGG | + | chr2.1:46010676-46010695 | MS.gene068905:intron | 20.0% |
| !!! | TGAAATGATGTTTGTTAAAT+TGG | + | chr2.1:46011402-46011421 | MS.gene068905:intron | 20.0% |
| !!! | TGTAAATTTGTATGTTTTTG+TGG | + | chr2.1:46011179-46011198 | MS.gene068905:intron | 20.0% |
| !!! | TTATGCACTTTTTAAAATTG+AGG | + | chr2.1:46008917-46008936 | MS.gene068905:intron | 20.0% |
| !!! | TTGATAATGATAAAAGATAC+GGG | + | chr2.1:46010945-46010964 | MS.gene068905:intron | 20.0% |
| !!! | TTTAGCTTACTTTAAGTTTT+AGG | + | chr2.1:46011283-46011302 | MS.gene068905:intron | 20.0% |
| !!! | TTTAGTTTTATGCATTGTTA+TGG | - | chr2.1:46011809-46011828 | None:intergenic | 20.0% |
| !!! | TTTTTTAGATGGAATTTGTT+AGG | + | chr2.1:46008695-46008714 | MS.gene068905:intron | 20.0% |
| ! | AAAATACACAATGCTTTGAT+TGG | + | chr2.1:46010461-46010480 | MS.gene068905:intron | 25.0% |
| ! | AAAATTACTATCCAAACACT+TGG | + | chr2.1:46010584-46010603 | MS.gene068905:intron | 25.0% |
| ! | AAAGTAACAAAGGAAGATAA+AGG | + | chr2.1:46011252-46011271 | MS.gene068905:intron | 25.0% |
| ! | AAATATAGTAGCATTTGCAT+TGG | + | chr2.1:46008073-46008092 | MS.gene068905:intron | 25.0% |
| ! | AAATATTTACTCATTCGTTC+AGG | + | chr2.1:46010113-46010132 | MS.gene068905:intron | 25.0% |
| ! | AAATGATTAAAATCACGAGA+AGG | - | chr2.1:46010521-46010540 | None:intergenic | 25.0% |
| ! | AACAAATTACCCAAAAGAAA+AGG | + | chr2.1:46009297-46009316 | MS.gene068905:intron | 25.0% |
| ! | AACAATGCATAATATATGCA+AGG | - | chr2.1:46009140-46009159 | None:intergenic | 25.0% |
| ! | AACCTAATAAAGCAAATAAG+CGG | + | chr2.1:46008588-46008607 | MS.gene068905:intron | 25.0% |
| ! | AATAAAAACCGTAACATGTT+GGG | - | chr2.1:46009932-46009951 | None:intergenic | 25.0% |
| ! | AATATAGTAGCATTTGCATT+GGG | + | chr2.1:46008074-46008093 | MS.gene068905:intron | 25.0% |
| ! | ACTTCAATGAGTTACATATT+TGG | + | chr2.1:46007931-46007950 | MS.gene068905:intron | 25.0% |
| ! | AGTAATAAGTCATAGATACA+AGG | - | chr2.1:46008383-46008402 | None:intergenic | 25.0% |
| ! | ATGTTAACAAATAAGACAAG+TGG | + | chr2.1:46007487-46007506 | MS.gene068905:CDS | 25.0% |
| ! | ATTGAGAGAAAGTTCATAAA+AGG | + | chr2.1:46011096-46011115 | MS.gene068905:intron | 25.0% |
| ! | CACATTTAATCTACTAAAAG+TGG | - | chr2.1:46010750-46010769 | None:intergenic | 25.0% |
| ! | CTAAGTTCATATTGATGTAT+AGG | + | chr2.1:46010279-46010298 | MS.gene068905:intron | 25.0% |
| ! | CTTCAATGAGTTACATATTT+GGG | + | chr2.1:46007932-46007951 | MS.gene068905:intron | 25.0% |
| ! | GATCAAATTGATAAGAGATA+AGG | - | chr2.1:46007575-46007594 | None:intergenic | 25.0% |
| ! | GGATTATAAAGCACATTATT+AGG | - | chr2.1:46011068-46011087 | None:intergenic | 25.0% |
| ! | GGTGCAAGTAATAATAATAA+GGG | + | chr2.1:46008010-46008029 | MS.gene068905:intron | 25.0% |
| ! | TAGAAATTAAATCATGGAGA+AGG | + | chr2.1:46011997-46012016 | MS.gene068905:intron | 25.0% |
| ! | TAGACATTAGAATGTGTATT+CGG | + | chr2.1:46007816-46007835 | MS.gene068905:intron | 25.0% |
| ! | TATCTCTTATCAATTTGATC+CGG | + | chr2.1:46007575-46007594 | MS.gene068905:intron | 25.0% |
| ! | TGACACTAGAAATTAAATCA+TGG | + | chr2.1:46011991-46012010 | MS.gene068905:intron | 25.0% |
| ! | TGGTGCAAGTAATAATAATA+AGG | + | chr2.1:46008009-46008028 | MS.gene068905:intron | 25.0% |
| ! | TTATGTGTTAGTTAGAACAT+TGG | + | chr2.1:46010614-46010633 | MS.gene068905:intron | 25.0% |
| ! | TTCTGTAAGTAATATACTCA+AGG | - | chr2.1:46012038-46012057 | None:intergenic | 25.0% |
| ! | TTTATTATCATCAGGGAATA+GGG | - | chr2.1:46011744-46011763 | None:intergenic | 25.0% |
| !! | ACGGGTTAAAGATTATTTAT+TGG | - | chr2.1:46008454-46008473 | None:intergenic | 25.0% |
| !! | ATTTTGTTGCATTGTCATAA+TGG | + | chr2.1:46011042-46011061 | MS.gene068905:intron | 25.0% |
| !! | CAGGAATTTTTATTATCATC+AGG | - | chr2.1:46011752-46011771 | None:intergenic | 25.0% |
| !! | CGTATCTTTTATCATTATCA+AGG | - | chr2.1:46010946-46010965 | None:intergenic | 25.0% |
| !! | GACCCTAATAATAATGATTT+TGG | + | chr2.1:46008200-46008219 | MS.gene068905:intron | 25.0% |
| !! | TATCCAAGAATAAACCTTTT+GGG | - | chr2.1:46011958-46011977 | None:intergenic | 25.0% |
| !! | TCAATACTAAAGCTTCTTTT+TGG | + | chr2.1:46010878-46010897 | MS.gene068905:intron | 25.0% |
| !! | TTATCCAAGAATAAACCTTT+TGG | - | chr2.1:46011959-46011978 | None:intergenic | 25.0% |
| !! | TTCATTTTCATTGATCACAA+GGG | + | chr2.1:46012129-46012148 | MS.gene068905:intron | 25.0% |
| !! | TTTCATTTTCATTGATCACA+AGG | + | chr2.1:46012128-46012147 | MS.gene068905:intron | 25.0% |
| !! | TTTTATTATCATCAGGGAAT+AGG | - | chr2.1:46011745-46011764 | None:intergenic | 25.0% |
| !!! | AATTTAGACTCTTTTTTTGG+TGG | + | chr2.1:46009095-46009114 | MS.gene068905:intron | 25.0% |
| !!! | AATTTTGTGCTTATTTTTGC+TGG | - | chr2.1:46008881-46008900 | None:intergenic | 25.0% |
| !!! | GTGCTTTTAACTTCATTTTT+TGG | - | chr2.1:46009274-46009293 | None:intergenic | 25.0% |
| !!! | TTTATGATTTTTCAGGTTGA+AGG | + | chr2.1:46011473-46011492 | MS.gene068905:intron | 25.0% |
| !!! | TTTTTCAAAAAAAAGGCAAG+AGG | + | chr2.1:46008501-46008520 | MS.gene068905:intron | 25.0% |
| AAAAGATAAAGAGGAAGAAG+AGG | - | chr2.1:46009541-46009560 | None:intergenic | 30.0% | |
| AAATTAAAGAAAAGGGCAAG+AGG | + | chr2.1:46008645-46008664 | MS.gene068905:intron | 30.0% | |
| AAATTAAATCATGGAGAAGG+AGG | + | chr2.1:46012000-46012019 | MS.gene068905:intron | 30.0% | |
| AACAATTCTTTCACTACCTA+AGG | + | chr2.1:46008293-46008312 | MS.gene068905:intron | 30.0% | |
| AACCTAATAAAGCAAATGAG+CGG | + | chr2.1:46008731-46008750 | MS.gene068905:intron | 30.0% | |
| AATAAGTTCAACCAAGCAAA+TGG | + | chr2.1:46012268-46012287 | MS.gene068905:intron | 30.0% | |
| ACCTAATAAAGCAAATAAGC+GGG | + | chr2.1:46008589-46008608 | MS.gene068905:intron | 30.0% | |
| ACTTTCTCTCAATGAAATTG+AGG | - | chr2.1:46011089-46011108 | None:intergenic | 30.0% | |
| AGACATTAGAATGTGTATTC+GGG | + | chr2.1:46007817-46007836 | MS.gene068905:intron | 30.0% | |
| AGATAGATAGACAGAGAAAA+CGG | + | chr2.1:46009388-46009407 | MS.gene068905:intron | 30.0% | |
| ATGACTTTCTCCTTTATGTT+CGG | + | chr2.1:46007874-46007893 | MS.gene068905:intron | 30.0% | |
| ATGTAACTCATTGAAGTGTA+TGG | - | chr2.1:46007928-46007947 | None:intergenic | 30.0% | |
| ATTTAAATCTACCTAGAGCT+AGG | - | chr2.1:46007757-46007776 | None:intergenic | 30.0% | |
| ATTTGCTTGGTTGAACTTAT+TGG | - | chr2.1:46012269-46012288 | None:intergenic | 30.0% | |
| CAAATAAGCGGGAAAAAATT+AGG | + | chr2.1:46008600-46008619 | MS.gene068905:intron | 30.0% | |
| CAAATGAGCGGAAAAAAATT+AGG | + | chr2.1:46008743-46008762 | MS.gene068905:intron | 30.0% | |
| CAATAAAAACCGTAACATGT+TGG | - | chr2.1:46009933-46009952 | None:intergenic | 30.0% | |
| CTACCATATCAATGATCTTA+CGG | - | chr2.1:46008473-46008492 | None:intergenic | 30.0% | |
| GATATGATGAATTATGCAGT+GGG | + | chr2.1:46011431-46011450 | MS.gene068905:intron | 30.0% | |
| GTTAGTCAAAATAGTTCATG+AGG | + | chr2.1:46009869-46009888 | MS.gene068905:intron | 30.0% | |
| TACCATATCAATGATCTTAC+GGG | - | chr2.1:46008472-46008491 | None:intergenic | 30.0% | |
| TACTTGATTCATTGAGAATG+AGG | + | chr2.1:46011136-46011155 | MS.gene068905:intron | 30.0% | |
| TAGATTAAATGTGCGTTTGA+GGG | + | chr2.1:46010757-46010776 | MS.gene068905:intron | 30.0% | |
| TATCAGGAACTTACAATTGT+AGG | - | chr2.1:46011644-46011663 | None:intergenic | 30.0% | |
| TGAACTTAGAATAAGAACAC+AGG | - | chr2.1:46010268-46010287 | None:intergenic | 30.0% | |
| TGATAGATAGTAGAAGGATA+AGG | + | chr2.1:46009345-46009364 | MS.gene068905:intron | 30.0% | |
| TGATATGATGAATTATGCAG+TGG | + | chr2.1:46011430-46011449 | MS.gene068905:intron | 30.0% | |
| TGCACAATTAAGAACTATTG+TGG | - | chr2.1:46009845-46009864 | None:intergenic | 30.0% | |
| TGCATAAAACTAAACACTGA+TGG | + | chr2.1:46011815-46011834 | MS.gene068905:intron | 30.0% | |
| TTACCCAAAAGGTTTATTCT+TGG | + | chr2.1:46011952-46011971 | MS.gene068905:intron | 30.0% | |
| TTACTGATATCATGTTTGAC+AGG | + | chr2.1:46010971-46010990 | MS.gene068905:intron | 30.0% | |
| TTAGTTATTACCATTGGAAG+TGG | - | chr2.1:46012093-46012112 | None:intergenic | 30.0% | |
| TTATTATCATCAGGGAATAG+GGG | - | chr2.1:46011743-46011762 | None:intergenic | 30.0% | |
| TTCAACCACAAAAGATAAAG+AGG | - | chr2.1:46009550-46009569 | None:intergenic | 30.0% | |
| TTCTTTACCTATTACCCAAA+AGG | + | chr2.1:46011941-46011960 | MS.gene068905:intron | 30.0% | |
| ! | AATCAATGCTTTGAATTGGA+GGG | + | chr2.1:46007644-46007663 | MS.gene068905:intron | 30.0% |
| ! | ATAAGAGTATACCAAGTGTT+TGG | - | chr2.1:46010598-46010617 | None:intergenic | 30.0% |
| ! | ATACAACAAGCTTTTAAGCA+AGG | - | chr2.1:46012438-46012457 | None:intergenic | 30.0% |
| ! | GTTGTCATTGATGCTTTTAA+TGG | + | chr2.1:46007989-46008008 | MS.gene068905:intron | 30.0% |
| ! | TAATTTAACTTCTGCCAGAT+TGG | + | chr2.1:46011686-46011705 | MS.gene068905:intron | 30.0% |
| ! | TGTGTTGAACCTTTTCTTTT+GGG | - | chr2.1:46009309-46009328 | None:intergenic | 30.0% |
| ! | TTATGGTTTGTATTCGTTGA+TGG | + | chr2.1:46009699-46009718 | MS.gene068905:intron | 30.0% |
| ! | TTCTTCCTCTTTATCTTTTG+TGG | + | chr2.1:46009542-46009561 | MS.gene068905:intron | 30.0% |
| ! | TTGTGTTGAACCTTTTCTTT+TGG | - | chr2.1:46009310-46009329 | None:intergenic | 30.0% |
| ! | TTTTAAGCAAGGAAGATTGA+GGG | - | chr2.1:46012427-46012446 | None:intergenic | 30.0% |
| !! | AAAAGAACTTTAGGATGCAA+AGG | - | chr2.1:46012070-46012089 | None:intergenic | 30.0% |
| !! | AAAGAACTTTAGGATGCAAA+GGG | - | chr2.1:46012069-46012088 | None:intergenic | 30.0% |
| !! | GAATAAACCTTTTGGGTAAT+AGG | - | chr2.1:46011951-46011970 | None:intergenic | 30.0% |
| !!! | GCTTACTTTAAGTTTTAGGA+TGG | + | chr2.1:46011287-46011306 | MS.gene068905:intron | 30.0% |
| !!! | GGCAATTTAGACTCTTTTTT+TGG | + | chr2.1:46009092-46009111 | MS.gene068905:intron | 30.0% |
| !!! | GTGCAATGCATTTTTTTAGA+TGG | + | chr2.1:46008541-46008560 | MS.gene068905:intron | 30.0% |
| AAAGAGGAAGAAGAGGAATT+GGG | - | chr2.1:46009534-46009553 | None:intergenic | 35.0% | |
| AACCCGTAAGATCATTGATA+TGG | + | chr2.1:46008467-46008486 | MS.gene068905:intron | 35.0% | |
| AACTAACAACTCAGCTACAT+AGG | + | chr2.1:46009065-46009084 | MS.gene068905:intron | 35.0% | |
| AATATACTCAAGGAACCCAA+GGG | - | chr2.1:46012028-46012047 | None:intergenic | 35.0% | |
| AATCATTGCAAAATCCTGTC+TGG | + | chr2.1:46012550-46012569 | MS.gene068905:CDS | 35.0% | |
| ATATCGTGGATTTCTACAAC+AGG | + | chr2.1:46012215-46012234 | MS.gene068905:intron | 35.0% | |
| ATGAAGTAGTAGTAACATGC+AGG | - | chr2.1:46011889-46011908 | None:intergenic | 35.0% | |
| CAAAAAAAAGGCAAGAGGAT+AGG | + | chr2.1:46008506-46008525 | MS.gene068905:intron | 35.0% | |
| CAAAATCCTGTCTGGAAATA+GGG | + | chr2.1:46012558-46012577 | MS.gene068905:CDS | 35.0% | |
| CAACAGGGTTCCTTAAAAAA+CGG | + | chr2.1:46012231-46012250 | MS.gene068905:intron | 35.0% | |
| CAAGAGGATAGGAATGAAAT+TGG | + | chr2.1:46008517-46008536 | MS.gene068905:intron | 35.0% | |
| CAATACAGTTTGAAAGGATC+AGG | - | chr2.1:46012501-46012520 | None:intergenic | 35.0% | |
| CATAGATACAAGGCGTAATA+GGG | - | chr2.1:46008373-46008392 | None:intergenic | 35.0% | |
| CTGAAGCAATACAGTTTGAA+AGG | - | chr2.1:46012507-46012526 | None:intergenic | 35.0% | |
| CTTTCAAACTGTATTGCTTC+AGG | + | chr2.1:46012505-46012524 | MS.gene068905:intron | 35.0% | |
| GATAGTAGAAGGATAAGGAA+AGG | + | chr2.1:46009350-46009369 | MS.gene068905:intron | 35.0% | |
| GCAAGAGGATAGAATGAAAT+TGG | + | chr2.1:46008660-46008679 | MS.gene068905:intron | 35.0% | |
| GTAGATTAAATGTGCGTTTG+AGG | + | chr2.1:46010756-46010775 | MS.gene068905:intron | 35.0% | |
| TAAAGAGGAAGAAGAGGAAT+TGG | - | chr2.1:46009535-46009554 | None:intergenic | 35.0% | |
| TAATATACTCAAGGAACCCA+AGG | - | chr2.1:46012029-46012048 | None:intergenic | 35.0% | |
| TACCTAAGGTAGAGTTTAGT+CGG | + | chr2.1:46008307-46008326 | MS.gene068905:intron | 35.0% | |
| TATCGTGGATTTCTACAACA+GGG | + | chr2.1:46012216-46012235 | MS.gene068905:intron | 35.0% | |
| TCAAATTCCGCAAATTCAAG+TGG | - | chr2.1:46009660-46009679 | None:intergenic | 35.0% | |
| TCATAGATACAAGGCGTAAT+AGG | - | chr2.1:46008374-46008393 | None:intergenic | 35.0% | |
| TGAACTTATTGGTAGATTCC+AGG | - | chr2.1:46012258-46012277 | None:intergenic | 35.0% | |
| TGCATAATATATGCAAGGTC+CGG | - | chr2.1:46009135-46009154 | None:intergenic | 35.0% | |
| TGCGTTAGTTAAGAAGTTAG+AGG | - | chr2.1:46010151-46010170 | None:intergenic | 35.0% | |
| TGGAAGTGGAAAAGAACTTT+AGG | - | chr2.1:46012079-46012098 | None:intergenic | 35.0% | |
| TGGAATTGTGAACAAAGAAG+AGG | - | chr2.1:46009502-46009521 | None:intergenic | 35.0% | |
| TGTTAAAGCTATTGCTGATG+CGG | + | chr2.1:46012628-46012647 | MS.gene068905:CDS | 35.0% | |
| TGTTGTAGAAATCCACGATA+TGG | - | chr2.1:46012216-46012235 | None:intergenic | 35.0% | |
| TTATCCACCACTTGAATTTG+CGG | + | chr2.1:46009650-46009669 | MS.gene068905:intron | 35.0% | |
| TTCCAAAAGCAACTCTCTTA+TGG | + | chr2.1:46010830-46010849 | MS.gene068905:intron | 35.0% | |
| TTCTAGGTACAATGACAAAG+CGG | + | chr2.1:46010203-46010222 | MS.gene068905:intron | 35.0% | |
| TTTGCAATTTCGCTACATTG+AGG | + | chr2.1:46010035-46010054 | MS.gene068905:intron | 35.0% | |
| ! | AAGTTCTTTTCCACTTCCAA+TGG | + | chr2.1:46012080-46012099 | MS.gene068905:intron | 35.0% |
| ! | ATCAATGCTTTGAATTGGAG+GGG | + | chr2.1:46007645-46007664 | MS.gene068905:intron | 35.0% |
| ! | CAATCAATGCTTTGAATTGG+AGG | + | chr2.1:46007643-46007662 | MS.gene068905:intron | 35.0% |
| ! | CGACAATCAATGCTTTGAAT+TGG | + | chr2.1:46007640-46007659 | MS.gene068905:intron | 35.0% |
| ! | CTTTTAAGCAAGGAAGATTG+AGG | - | chr2.1:46012428-46012447 | None:intergenic | 35.0% |
| ! | TCATGTTTGACAGGACATTT+TGG | + | chr2.1:46010980-46010999 | MS.gene068905:intron | 35.0% |
| ! | TCCCGCTTATTTGCTTTATT+AGG | - | chr2.1:46008593-46008612 | None:intergenic | 35.0% |
| ! | TTCCGCTCATTTGCTTTATT+AGG | - | chr2.1:46008736-46008755 | None:intergenic | 35.0% |
| !! | CATCAGCAATAGCTTTAACA+CGG | - | chr2.1:46012628-46012647 | None:intergenic | 35.0% |
| !! | GTTTTTGAAGACCATTTGCT+TGG | - | chr2.1:46012282-46012301 | None:intergenic | 35.0% |
| !! | TTCCATAAGAGAGTTGCTTT+TGG | - | chr2.1:46010835-46010854 | None:intergenic | 35.0% |
| !!! | ACATTTTGGTTTTGCTTCTC+TGG | + | chr2.1:46010994-46011013 | MS.gene068905:intron | 35.0% |
| !!! | TTAGACTCTTTTTTTGGTGG+TGG | + | chr2.1:46009098-46009117 | MS.gene068905:intron | 35.0% |
| AACGTAGTCCCAACATGTTA+CGG | + | chr2.1:46009921-46009940 | MS.gene068905:intron | 40.0% | |
| AATTCCGCAAATTCAAGTGG+TGG | - | chr2.1:46009657-46009676 | None:intergenic | 40.0% | |
| ACAAAGGAAGATAAAGGAGC+AGG | + | chr2.1:46011258-46011277 | MS.gene068905:intron | 40.0% | |
| ACTTACAATTGTAGGACCAG+AGG | - | chr2.1:46011636-46011655 | None:intergenic | 40.0% | |
| AGAAGAGGAAGAAGAAGAAG+AGG | - | chr2.1:46009487-46009506 | None:intergenic | 40.0% | |
| AGGATCAAATTGGTTGTCTC+CGG | - | chr2.1:46007597-46007616 | None:intergenic | 40.0% | |
| AGGGAAATGTGCAAGAATGA+AGG | - | chr2.1:46009467-46009486 | None:intergenic | 40.0% | |
| ATAGACAGAGAAAACGGTAC+TGG | + | chr2.1:46009394-46009413 | MS.gene068905:intron | 40.0% | |
| ATAGTAGCATTTGCATTGGG+AGG | + | chr2.1:46008077-46008096 | MS.gene068905:intron | 40.0% | |
| ATGTGTATTCGGGATTCCAA+TGG | + | chr2.1:46007827-46007846 | MS.gene068905:intron | 40.0% | |
| CCATGTTCGTATCAGAAAGA+AGG | + | chr2.1:46009608-46009627 | MS.gene068905:CDS | 40.0% | |
| CCTACATCTACCGAACATAA+AGG | - | chr2.1:46007887-46007906 | None:intergenic | 40.0% | |
| CCTTCTTTCTGATACGAACA+TGG | - | chr2.1:46009611-46009630 | None:intergenic | 40.0% | |
| CCTTTATGTTCGGTAGATGT+AGG | + | chr2.1:46007884-46007903 | MS.gene068905:intron | 40.0% | |
| GAAGAAGAGGAATTGGGATT+GGG | - | chr2.1:46009528-46009547 | None:intergenic | 40.0% | |
| GAAGAGGAAGAAGAAGAAGA+GGG | - | chr2.1:46009486-46009505 | None:intergenic | 40.0% | |
| GATCGAAACACAGACAATCT+TGG | - | chr2.1:46011512-46011531 | None:intergenic | 40.0% | |
| GCAAAATCCTGTCTGGAAAT+AGG | + | chr2.1:46012557-46012576 | MS.gene068905:CDS | 40.0% | |
| GTCGAGTGATAGATAGTAGA+AGG | + | chr2.1:46009339-46009358 | MS.gene068905:intron | 40.0% | |
| GTGCACTTCGTTAGTCAAAA+TGG | - | chr2.1:46010002-46010021 | None:intergenic | 40.0% | |
| TACCTAGAACTGTATCCACT+GGG | - | chr2.1:46010192-46010211 | None:intergenic | 40.0% | |
| TACTCTCGAAGCAAGATTTG+AGG | + | chr2.1:46010907-46010926 | MS.gene068905:intron | 40.0% | |
| TCTGGAAATAGGGATCACAA+AGG | + | chr2.1:46012568-46012587 | MS.gene068905:CDS | 40.0% | |
| TGAAGCAAGTGTATGCATCT+TGG | - | chr2.1:46011570-46011589 | None:intergenic | 40.0% | |
| TTCCGACTAAACTCTACCTT+AGG | - | chr2.1:46008312-46008331 | None:intergenic | 40.0% | |
| TTGGACAAAGAGATGCTTGT+TGG | - | chr2.1:46011534-46011553 | None:intergenic | 40.0% | |
| ! | ACAGACAATCTTGGTCTTTC+GGG | - | chr2.1:46011503-46011522 | None:intergenic | 40.0% |
| ! | AGCATTGTGTATTTTCGCGA+AGG | - | chr2.1:46010419-46010438 | None:intergenic | 40.0% |
| ! | CACAGACAATCTTGGTCTTT+CGG | - | chr2.1:46011504-46011523 | None:intergenic | 40.0% |
| ! | CATTCGTTCAGGTTTGAACT+AGG | + | chr2.1:46010124-46010143 | MS.gene068905:intron | 40.0% |
| ! | GGAGAGTACAAAACTAGTCA+AGG | - | chr2.1:46010702-46010721 | None:intergenic | 40.0% |
| !! | AAAGCATTGATTGTCGCTTG+TGG | - | chr2.1:46007636-46007655 | None:intergenic | 40.0% |
| !! | AAGCATTGATTGTCGCTTGT+GGG | - | chr2.1:46007635-46007654 | None:intergenic | 40.0% |
| !!! | GATTCCAGGACCGTTTTTTA+AGG | - | chr2.1:46012244-46012263 | None:intergenic | 40.0% |
| ACAAAGGTAGCCTTTGACAG+AGG | + | chr2.1:46012584-46012603 | MS.gene068905:CDS | 45.0% | |
| ACACAACACTGAGTCCAATC+TGG | - | chr2.1:46011703-46011722 | None:intergenic | 45.0% | |
| ACATCCCACATGGCATATGA+TGG | + | chr2.1:46007726-46007745 | MS.gene068905:intron | 45.0% | |
| ACCTAGAACTGTATCCACTG+GGG | - | chr2.1:46010191-46010210 | None:intergenic | 45.0% | |
| CAACTCAGCTACATAGGACA+TGG | + | chr2.1:46009071-46009090 | MS.gene068905:intron | 45.0% | |
| CAACTCTGTCAGCAATCTGA+TGG | + | chr2.1:46007525-46007544 | MS.gene068905:CDS | 45.0% | |
| CATCAGATTGCTGACAGAGT+TGG | - | chr2.1:46007527-46007546 | None:intergenic | 45.0% | |
| CGCTACATTGAGGACTATTG+TGG | + | chr2.1:46010045-46010064 | MS.gene068905:intron | 45.0% | |
| CGGCGAGTTAAGGATCAAAT+TGG | - | chr2.1:46007607-46007626 | None:intergenic | 45.0% | |
| CTTTAACACGGCCATGGTAT+GGG | - | chr2.1:46012616-46012635 | None:intergenic | 45.0% | |
| GAAGAGTTGAACTTCACCTC+TGG | + | chr2.1:46011617-46011636 | MS.gene068905:CDS | 45.0% | |
| GATGGCAGATATGATCACGA+GGG | + | chr2.1:46011833-46011852 | MS.gene068905:intron | 45.0% | |
| GCTTCAGGAAGTAGCAAAGA+GGG | + | chr2.1:46012520-46012539 | MS.gene068905:intron | 45.0% | |
| GGAAGAAGAGGAATTGGGAT+TGG | - | chr2.1:46009529-46009548 | None:intergenic | 45.0% | |
| GGTTCCTTAAAAAACGGTCC+TGG | + | chr2.1:46012237-46012256 | MS.gene068905:intron | 45.0% | |
| GTACCTAGAACTGTATCCAC+TGG | - | chr2.1:46010193-46010212 | None:intergenic | 45.0% | |
| TCAACTGAATTAAGCTCGCG+AGG | + | chr2.1:46009164-46009183 | MS.gene068905:intron | 45.0% | |
| TGATGGCAGATATGATCACG+AGG | + | chr2.1:46011832-46011851 | MS.gene068905:intron | 45.0% | |
| TGCTAGCACAAAACTGCCAT+TGG | - | chr2.1:46007846-46007865 | None:intergenic | 45.0% | |
| TGCTTCAGGAAGTAGCAAAG+AGG | + | chr2.1:46012519-46012538 | MS.gene068905:intron | 45.0% | |
| TGTGATCCCTATTTCCAGAC+AGG | - | chr2.1:46012567-46012586 | None:intergenic | 45.0% | |
| TTCAGCTTCGACAATGCAGA+AGG | + | chr2.1:46011586-46011605 | MS.gene068905:CDS | 45.0% | |
| ! | AGATGTTTCTCTCGACTCGA+AGG | + | chr2.1:46007967-46007986 | MS.gene068905:intron | 45.0% |
| ! | ATTGTCGCTTGTGGGAAGAT+CGG | - | chr2.1:46007627-46007646 | None:intergenic | 45.0% |
| ! | GCAATGAATCGAAAGCACAG+TGG | + | chr2.1:46012187-46012206 | MS.gene068905:intron | 45.0% |
| !! | CAATAGCTTTAACACGGCCA+TGG | - | chr2.1:46012622-46012641 | None:intergenic | 45.0% |
| !! | TCTTGGTGTCGTCAATCACT+TGG | - | chr2.1:46011553-46011572 | None:intergenic | 45.0% |
| !! | AATTAAATTATTATCAATTT+GGG | - | chr2.1:46010544-46010563 | None:intergenic | 5.0% |
| !!! | AAATATTTTTTTCAAAAAAA+AGG | + | chr2.1:46008494-46008513 | MS.gene068905:intron | 5.0% |
| !!! | TATTTTTATTTTATTTTTGA+AGG | + | chr2.1:46008229-46008248 | MS.gene068905:intron | 5.0% |
| !!! | TTATTAAAATTATTTTTTAG+AGG | - | chr2.1:46008833-46008852 | None:intergenic | 5.0% |
| AAATGTTAACCAGTGCCCCC+GGG | + | chr2.1:46008033-46008052 | MS.gene068905:intron | 50.0% | |
| AAGCCAAAGCCACTACTCGA+AGG | + | chr2.1:46009568-46009587 | MS.gene068905:intron | 50.0% | |
| AAGGTAGCCTTTGACAGAGG+TGG | + | chr2.1:46012587-46012606 | MS.gene068905:CDS | 50.0% | |
| ACCCCAGTGGATACAGTTCT+AGG | + | chr2.1:46010187-46010206 | MS.gene068905:intron | 50.0% | |
| AGAACTGTATCCACTGGGGT+GGG | - | chr2.1:46010187-46010206 | None:intergenic | 50.0% | |
| AGAGGTGGTTACCCATACCA+TGG | + | chr2.1:46012602-46012621 | MS.gene068905:CDS | 50.0% | |
| AGCCAAAGCCACTACTCGAA+GGG | + | chr2.1:46009569-46009588 | MS.gene068905:intron | 50.0% | |
| ATGGAGAAGGAGGAACCCTT+GGG | + | chr2.1:46012010-46012029 | MS.gene068905:intron | 50.0% | |
| ATGTGGGATGTCTCTGGTCT+CGG | - | chr2.1:46007717-46007736 | None:intergenic | 50.0% | |
| CAGGAAGTAGCAAAGAGGGT+GGG | + | chr2.1:46012524-46012543 | MS.gene068905:intron | 50.0% | |
| CCACATGGCATATGATGGCA+CGG | + | chr2.1:46007731-46007750 | MS.gene068905:intron | 50.0% | |
| CGTGCCATCATATGCCATGT+GGG | - | chr2.1:46007733-46007752 | None:intergenic | 50.0% | |
| GAAATGTTAACCAGTGCCCC+CGG | + | chr2.1:46008032-46008051 | MS.gene068905:intron | 50.0% | |
| GAGAAACGTAACGGCGTATC+AGG | - | chr2.1:46011660-46011679 | None:intergenic | 50.0% | |
| GATCCTACTACGAGTGGAAG+AGG | + | chr2.1:46007547-46007566 | MS.gene068905:CDS | 50.0% | |
| GCTTTAACACGGCCATGGTA+TGG | - | chr2.1:46012617-46012636 | None:intergenic | 50.0% | |
| TAGAACTGTATCCACTGGGG+TGG | - | chr2.1:46010188-46010207 | None:intergenic | 50.0% | |
| TATGCCATGTGGGATGTCTC+TGG | - | chr2.1:46007723-46007742 | None:intergenic | 50.0% | |
| TCAGGAAGTAGCAAAGAGGG+TGG | + | chr2.1:46012523-46012542 | MS.gene068905:intron | 50.0% | |
| TCTGTCTTCCCTTCGAGTAG+TGG | - | chr2.1:46009580-46009599 | None:intergenic | 50.0% | |
| TGGGTAACCACCTCTGTCAA+AGG | - | chr2.1:46012597-46012616 | None:intergenic | 50.0% | |
| TTCCCTTCGAGTAGTGGCTT+TGG | - | chr2.1:46009574-46009593 | None:intergenic | 50.0% | |
| ! | CAGAGAAAACGGTACTGGAG+TGG | + | chr2.1:46009399-46009418 | MS.gene068905:intron | 50.0% |
| ! | CTGATGGATCCTACTACGAG+TGG | + | chr2.1:46007541-46007560 | MS.gene068905:CDS | 50.0% |
| ! | GTAGATGTAGGTGAAGCGCT+GGG | + | chr2.1:46007896-46007915 | MS.gene068905:intron | 50.0% |
| ! | TGCAAGGTCCGGTTCTAACT+CGG | - | chr2.1:46009124-46009143 | None:intergenic | 50.0% |
| AATGTTAACCAGTGCCCCCG+GGG | + | chr2.1:46008034-46008053 | MS.gene068905:intron | 55.0% | |
| AGAAAACTCGTGCGACGCAC+GGG | - | chr2.1:46008416-46008435 | None:intergenic | 55.0% | |
| CATGGAGAAGGAGGAACCCT+TGG | + | chr2.1:46012009-46012028 | MS.gene068905:intron | 55.0% | |
| CCGTGCCATCATATGCCATG+TGG | - | chr2.1:46007734-46007753 | None:intergenic | 55.0% | |
| GAGAAAACTCGTGCGACGCA+CGG | - | chr2.1:46008417-46008436 | None:intergenic | 55.0% | |
| GAGACCAGAGACATCCCACA+TGG | + | chr2.1:46007716-46007735 | MS.gene068905:intron | 55.0% | |
| GAGGAATTGGGATTGGGCGT+TGG | - | chr2.1:46009522-46009541 | None:intergenic | 55.0% | |
| GCACAGTGGCTACCATATCG+TGG | + | chr2.1:46012201-46012220 | MS.gene068905:intron | 55.0% | |
| GGACCTCTTCCACTCGTAGT+AGG | - | chr2.1:46007553-46007572 | None:intergenic | 55.0% | |
| GGTAGATGTAGGTGAAGCGC+TGG | + | chr2.1:46007895-46007914 | MS.gene068905:intron | 55.0% | |
| GTCATGTTAACCAGTGCCCC+CGG | - | chr2.1:46008183-46008202 | None:intergenic | 55.0% | |
| GTGGGAAGATCGGCGAGTTA+AGG | - | chr2.1:46007617-46007636 | None:intergenic | 55.0% | |
| TCATGTTAACCAGTGCCCCC+GGG | - | chr2.1:46008182-46008201 | None:intergenic | 55.0% | |
| AGTTGAGCTACCCACCCCAG+TGG | + | chr2.1:46010174-46010193 | MS.gene068905:intron | 60.0% | |
| CATGTTAACCAGTGCCCCCG+GGG | - | chr2.1:46008181-46008200 | None:intergenic | 60.0% | |
| CTTCCTTAACCAGTGCCCCG+GGG | + | chr2.1:46008163-46008182 | MS.gene068905:intron | 60.0% | |
| GCTTCCTTAACCAGTGCCCC+GGG | + | chr2.1:46008162-46008181 | MS.gene068905:intron | 60.0% | |
| GGCTTCCTTAACCAGTGCCC+CGG | + | chr2.1:46008161-46008180 | MS.gene068905:intron | 60.0% | |
| TGACCCCTTAACCAGTGCCC+CGG | - | chr2.1:46008054-46008073 | None:intergenic | 60.0% | |
| TTCCTTAACCAGTGCCCCGG+GGG | + | chr2.1:46008164-46008183 | MS.gene068905:intron | 60.0% | |
| ! | GGTGGTGGCCGAGTTAGAAC+CGG | + | chr2.1:46009113-46009132 | MS.gene068905:intron | 60.0% |
| ! | TGATGGCACGGCCTAGCTCT+AGG | + | chr2.1:46007743-46007762 | MS.gene068905:intron | 60.0% |
| ACCCCTTAACCAGTGCCCCG+GGG | - | chr2.1:46008052-46008071 | None:intergenic | 65.0% | |
| GACCCCTTAACCAGTGCCCC+GGG | - | chr2.1:46008053-46008072 | None:intergenic | 65.0% | |
| GCTGATGCGGCTCGCGAACA+TGG | + | chr2.1:46012641-46012660 | MS.gene068905:CDS | 65.0% | |
| CCCCTTAACCAGTGCCCCGG+GGG | - | chr2.1:46008051-46008070 | None:intergenic | 70.0% | |
| !! | CCCCCGGGGCACTGGTTAAG+GGG | + | chr2.1:46008048-46008067 | MS.gene068905:intron | 70.0% |
| !! | GCCCCCGGGGCACTGGTTAA+GGG | + | chr2.1:46008047-46008066 | MS.gene068905:intron | 70.0% |
| !! | TGCCCCCGGGGCACTGGTTA+AGG | + | chr2.1:46008046-46008065 | MS.gene068905:intron | 70.0% |
| !! | TGCCCCCGGGGCACTGGTTA+AGG | - | chr2.1:46008065-46008046 | None:intergenic | 70.0% |
| AACCAGTGCCCCCGGGGCAC+TGG | + | chr2.1:46008040-46008059 | MS.gene068905:intron | 75.0% | |
| AACCAGTGCCCCCGGGGCAC+TGG | - | chr2.1:46008059-46008040 | None:intergenic | 75.0% | |
| ! | AACCAGTGCCCCGGGGGCAC+TGG | + | chr2.1:46008170-46008189 | MS.gene068905:intron | 75.0% |
| ! | AACCAGTGCCCCGGGGGCAC+TGG | - | chr2.1:46008189-46008170 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.1 | gene | 46007487 | 46012676 | 46007487 | ID=MS.gene068905 |
| chr2.1 | mRNA | 46007487 | 46012676 | 46007487 | ID=MS.gene068905.t1;Parent=MS.gene068905 |
| chr2.1 | exon | 46007487 | 46007568 | 46007487 | ID=MS.gene068905.t1.exon1;Parent=MS.gene068905.t1 |
| chr2.1 | CDS | 46007487 | 46007568 | 46007487 | ID=cds.MS.gene068905.t1;Parent=MS.gene068905.t1 |
| chr2.1 | exon | 46009571 | 46009629 | 46009571 | ID=MS.gene068905.t1.exon2;Parent=MS.gene068905.t1 |
| chr2.1 | CDS | 46009571 | 46009629 | 46009571 | ID=cds.MS.gene068905.t1;Parent=MS.gene068905.t1 |
| chr2.1 | exon | 46011488 | 46011649 | 46011488 | ID=MS.gene068905.t1.exon3;Parent=MS.gene068905.t1 |
| chr2.1 | CDS | 46011488 | 46011649 | 46011488 | ID=cds.MS.gene068905.t1;Parent=MS.gene068905.t1 |
| chr2.1 | exon | 46012527 | 46012676 | 46012527 | ID=MS.gene068905.t1.exon4;Parent=MS.gene068905.t1 |
| chr2.1 | CDS | 46012527 | 46012676 | 46012527 | ID=cds.MS.gene068905.t1;Parent=MS.gene068905.t1 |
| Gene Sequence |
| Protein sequence |
