Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene52238.t1 | XP_003623928.1 | 96.8 | 346 | 11 | 0 | 1 | 346 | 1 | 346 | 7.00E-183 | 649.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene52238.t1 | Q8L7L5 | 41.8 | 361 | 188 | 7 | 1 | 346 | 1 | 354 | 1.8e-57 | 224.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene52238.t1 | G7L3M6 | 96.8 | 346 | 11 | 0 | 1 | 346 | 1 | 346 | 5.1e-183 | 649.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049260 | MS.gene52238 | 0.800358 | 1.50E-48 | -1.69E-46 |
| MS.gene049284 | MS.gene52238 | 0.824601 | 7.39E-54 | -1.69E-46 |
| MS.gene049346 | MS.gene52238 | 0.857177 | 1.95E-62 | -1.69E-46 |
| MS.gene049351 | MS.gene52238 | 0.847007 | 1.52E-59 | -1.69E-46 |
| MS.gene049389 | MS.gene52238 | 0.814978 | 1.17E-51 | -1.69E-46 |
| MS.gene049427 | MS.gene52238 | 0.802414 | 5.67E-49 | -1.69E-46 |
| MS.gene049491 | MS.gene52238 | 0.862222 | 5.90E-64 | -1.69E-46 |
| MS.gene049599 | MS.gene52238 | -0.820261 | 7.53E-53 | -1.69E-46 |
| MS.gene049614 | MS.gene52238 | 0.812298 | 4.55E-51 | -1.69E-46 |
| MS.gene049661 | MS.gene52238 | 0.871835 | 5.05E-67 | -1.69E-46 |
| MS.gene049662 | MS.gene52238 | 0.876146 | 1.76E-68 | -1.69E-46 |
| MS.gene049758 | MS.gene52238 | 0.901993 | 1.53E-78 | -1.69E-46 |
| MS.gene049910 | MS.gene52238 | 0.823739 | 1.18E-53 | -1.69E-46 |
| MS.gene049915 | MS.gene52238 | 0.804728 | 1.88E-49 | -1.69E-46 |
| MS.gene050076 | MS.gene52238 | 0.884957 | 1.23E-71 | -1.69E-46 |
| MS.gene050099 | MS.gene52238 | 0.840012 | 1.12E-57 | -1.69E-46 |
| MS.gene050128 | MS.gene52238 | 0.867128 | 1.72E-65 | -1.69E-46 |
| MS.gene050301 | MS.gene52238 | 0.903515 | 3.20E-79 | -1.69E-46 |
| MS.gene050397 | MS.gene52238 | 0.88375 | 3.44E-71 | -1.69E-46 |
| MS.gene050404 | MS.gene52238 | 0.88289 | 7.12E-71 | -1.69E-46 |
| MS.gene050406 | MS.gene52238 | 0.879857 | 8.84E-70 | -1.69E-46 |
| MS.gene050432 | MS.gene52238 | 0.84471 | 6.39E-59 | -1.69E-46 |
| MS.gene050464 | MS.gene52238 | 0.843241 | 1.58E-58 | -1.69E-46 |
| MS.gene050529 | MS.gene52238 | 0.871707 | 5.57E-67 | -1.69E-46 |
| MS.gene05053 | MS.gene52238 | 0.826153 | 3.17E-54 | -1.69E-46 |
| MS.gene050670 | MS.gene52238 | 0.810917 | 9.08E-51 | -1.69E-46 |
| MS.gene050767 | MS.gene52238 | 0.850034 | 2.20E-60 | -1.69E-46 |
| MS.gene050770 | MS.gene52238 | 0.851504 | 8.50E-61 | -1.69E-46 |
| MS.gene05101 | MS.gene52238 | 0.893813 | 4.43E-75 | -1.69E-46 |
| MS.gene05105 | MS.gene52238 | 0.82099 | 5.12E-53 | -1.69E-46 |
| MS.gene051471 | MS.gene52238 | 0.9039 | 2.15E-79 | -1.69E-46 |
| MS.gene051582 | MS.gene52238 | 0.836446 | 9.31E-57 | -1.69E-46 |
| MS.gene051662 | MS.gene52238 | 0.836335 | 9.94E-57 | -1.69E-46 |
| MS.gene051663 | MS.gene52238 | 0.840238 | 9.81E-58 | -1.69E-46 |
| MS.gene051860 | MS.gene52238 | 0.825553 | 4.40E-54 | -1.69E-46 |
| MS.gene051877 | MS.gene52238 | 0.819255 | 1.28E-52 | -1.69E-46 |
| MS.gene052077 | MS.gene52238 | 0.822113 | 2.82E-53 | -1.69E-46 |
| MS.gene052078 | MS.gene52238 | 0.897779 | 1.01E-76 | -1.69E-46 |
| MS.gene052178 | MS.gene52238 | 0.902731 | 7.18E-79 | -1.69E-46 |
| MS.gene052188 | MS.gene52238 | 0.856666 | 2.76E-62 | -1.69E-46 |
| MS.gene052207 | MS.gene52238 | 0.816943 | 4.26E-52 | -1.69E-46 |
| MS.gene052253 | MS.gene52238 | 0.848614 | 5.48E-60 | -1.69E-46 |
| MS.gene052287 | MS.gene52238 | 0.817956 | 2.52E-52 | -1.69E-46 |
| MS.gene052290 | MS.gene52238 | 0.863891 | 1.80E-64 | -1.69E-46 |
| MS.gene052293 | MS.gene52238 | 0.802963 | 4.37E-49 | -1.69E-46 |
| MS.gene052310 | MS.gene52238 | 0.878376 | 2.95E-69 | -1.69E-46 |
| MS.gene052322 | MS.gene52238 | 0.824004 | 1.02E-53 | -1.69E-46 |
| MS.gene052326 | MS.gene52238 | 0.880382 | 5.75E-70 | -1.69E-46 |
| MS.gene052340 | MS.gene52238 | 0.87515 | 3.87E-68 | -1.69E-46 |
| MS.gene052485 | MS.gene52238 | 0.83172 | 1.42E-55 | -1.69E-46 |
| MS.gene052917 | MS.gene52238 | -0.807431 | 5.07E-50 | -1.69E-46 |
| MS.gene053073 | MS.gene52238 | 0.834546 | 2.82E-56 | -1.69E-46 |
| MS.gene053103 | MS.gene52238 | 0.816562 | 5.19E-52 | -1.69E-46 |
| MS.gene053181 | MS.gene52238 | 0.817719 | 2.85E-52 | -1.69E-46 |
| MS.gene053209 | MS.gene52238 | 0.862279 | 5.67E-64 | -1.69E-46 |
| MS.gene053322 | MS.gene52238 | 0.827939 | 1.19E-54 | -1.69E-46 |
| MS.gene053557 | MS.gene52238 | 0.884896 | 1.30E-71 | -1.69E-46 |
| MS.gene053836 | MS.gene52238 | 0.90088 | 4.70E-78 | -1.69E-46 |
| MS.gene053907 | MS.gene52238 | 0.844041 | 9.66E-59 | -1.69E-46 |
| MS.gene053928 | MS.gene52238 | 0.815586 | 8.57E-52 | -1.69E-46 |
| MS.gene053971 | MS.gene52238 | 0.84812 | 7.50E-60 | -1.69E-46 |
| MS.gene054010 | MS.gene52238 | 0.809135 | 2.20E-50 | -1.69E-46 |
| MS.gene054011 | MS.gene52238 | 0.836745 | 7.82E-57 | -1.69E-46 |
| MS.gene054012 | MS.gene52238 | 0.824018 | 1.01E-53 | -1.69E-46 |
| MS.gene054013 | MS.gene52238 | 0.822435 | 2.37E-53 | -1.69E-46 |
| MS.gene054123 | MS.gene52238 | 0.854646 | 1.07E-61 | -1.69E-46 |
| MS.gene054214 | MS.gene52238 | 0.841906 | 3.58E-58 | -1.69E-46 |
| MS.gene054349 | MS.gene52238 | 0.805408 | 1.35E-49 | -1.69E-46 |
| MS.gene054376 | MS.gene52238 | 0.871519 | 6.42E-67 | -1.69E-46 |
| MS.gene054473 | MS.gene52238 | 0.84483 | 5.93E-59 | -1.69E-46 |
| MS.gene054542 | MS.gene52238 | 0.804 | 2.67E-49 | -1.69E-46 |
| MS.gene05455 | MS.gene52238 | 0.84352 | 1.33E-58 | -1.69E-46 |
| MS.gene054618 | MS.gene52238 | 0.831116 | 2.00E-55 | -1.69E-46 |
| MS.gene054667 | MS.gene52238 | 0.804722 | 1.88E-49 | -1.69E-46 |
| MS.gene054802 | MS.gene52238 | 0.834005 | 3.85E-56 | -1.69E-46 |
| MS.gene054803 | MS.gene52238 | 0.836027 | 1.19E-56 | -1.69E-46 |
| MS.gene054804 | MS.gene52238 | 0.836649 | 8.27E-57 | -1.69E-46 |
| MS.gene054930 | MS.gene52238 | 0.804895 | 1.73E-49 | -1.69E-46 |
| MS.gene054983 | MS.gene52238 | 0.840121 | 1.05E-57 | -1.69E-46 |
| MS.gene055116 | MS.gene52238 | 0.865861 | 4.34E-65 | -1.69E-46 |
| MS.gene055133 | MS.gene52238 | 0.802555 | 5.31E-49 | -1.69E-46 |
| MS.gene055254 | MS.gene52238 | 0.862178 | 6.09E-64 | -1.69E-46 |
| MS.gene055277 | MS.gene52238 | 0.921471 | 3.43E-88 | -1.69E-46 |
| MS.gene055390 | MS.gene52238 | 0.859769 | 3.29E-63 | -1.69E-46 |
| MS.gene055397 | MS.gene52238 | 0.806378 | 8.47E-50 | -1.69E-46 |
| MS.gene055422 | MS.gene52238 | 0.908802 | 1.15E-81 | -1.69E-46 |
| MS.gene055428 | MS.gene52238 | 0.896814 | 2.57E-76 | -1.69E-46 |
| MS.gene055499 | MS.gene52238 | 0.831484 | 1.63E-55 | -1.69E-46 |
| MS.gene055533 | MS.gene52238 | 0.807635 | 4.59E-50 | -1.69E-46 |
| MS.gene05553 | MS.gene52238 | 0.802741 | 4.86E-49 | -1.69E-46 |
| MS.gene055604 | MS.gene52238 | 0.848061 | 7.79E-60 | -1.69E-46 |
| MS.gene055712 | MS.gene52238 | 0.843402 | 1.43E-58 | -1.69E-46 |
| MS.gene055896 | MS.gene52238 | 0.828488 | 8.74E-55 | -1.69E-46 |
| MS.gene05592 | MS.gene52238 | 0.806992 | 6.28E-50 | -1.69E-46 |
| MS.gene056191 | MS.gene52238 | 0.874488 | 6.50E-68 | -1.69E-46 |
| MS.gene056314 | MS.gene52238 | 0.829964 | 3.83E-55 | -1.69E-46 |
| MS.gene056407 | MS.gene52238 | 0.840826 | 6.88E-58 | -1.69E-46 |
| MS.gene056410 | MS.gene52238 | 0.843548 | 1.31E-58 | -1.69E-46 |
| MS.gene056451 | MS.gene52238 | 0.834687 | 2.60E-56 | -1.69E-46 |
| MS.gene056609 | MS.gene52238 | 0.854565 | 1.13E-61 | -1.69E-46 |
| MS.gene056612 | MS.gene52238 | 0.900707 | 5.59E-78 | -1.69E-46 |
| MS.gene056659 | MS.gene52238 | 0.811683 | 6.19E-51 | -1.69E-46 |
| MS.gene056719 | MS.gene52238 | 0.800718 | 1.26E-48 | -1.69E-46 |
| MS.gene056772 | MS.gene52238 | 0.84528 | 4.48E-59 | -1.69E-46 |
| MS.gene056796 | MS.gene52238 | 0.820704 | 5.96E-53 | -1.69E-46 |
| MS.gene05702 | MS.gene52238 | 0.908131 | 2.39E-81 | -1.69E-46 |
| MS.gene057121 | MS.gene52238 | 0.845417 | 4.11E-59 | -1.69E-46 |
| MS.gene057123 | MS.gene52238 | 0.832502 | 9.11E-56 | -1.69E-46 |
| MS.gene057129 | MS.gene52238 | 0.817075 | 3.98E-52 | -1.69E-46 |
| MS.gene057245 | MS.gene52238 | 0.857221 | 1.89E-62 | -1.69E-46 |
| MS.gene057295 | MS.gene52238 | 0.846558 | 2.01E-59 | -1.69E-46 |
| MS.gene05733 | MS.gene52238 | 0.873827 | 1.09E-67 | -1.69E-46 |
| MS.gene057439 | MS.gene52238 | 0.866639 | 2.46E-65 | -1.69E-46 |
| MS.gene057448 | MS.gene52238 | 0.822977 | 1.77E-53 | -1.69E-46 |
| MS.gene057449 | MS.gene52238 | 0.808843 | 2.54E-50 | -1.69E-46 |
| MS.gene057450 | MS.gene52238 | 0.836333 | 9.95E-57 | -1.69E-46 |
| MS.gene057749 | MS.gene52238 | 0.801696 | 7.97E-49 | -1.69E-46 |
| MS.gene057754 | MS.gene52238 | 0.802133 | 6.48E-49 | -1.69E-46 |
| MS.gene057779 | MS.gene52238 | 0.82882 | 7.27E-55 | -1.69E-46 |
| MS.gene057782 | MS.gene52238 | 0.832357 | 9.90E-56 | -1.69E-46 |
| MS.gene057794 | MS.gene52238 | 0.810296 | 1.24E-50 | -1.69E-46 |
| MS.gene057796 | MS.gene52238 | 0.839614 | 1.43E-57 | -1.69E-46 |
| MS.gene058002 | MS.gene52238 | 0.876929 | 9.44E-69 | -1.69E-46 |
| MS.gene058082 | MS.gene52238 | 0.857999 | 1.11E-62 | -1.69E-46 |
| MS.gene05811 | MS.gene52238 | 0.873089 | 1.93E-67 | -1.69E-46 |
| MS.gene058142 | MS.gene52238 | 0.821667 | 3.57E-53 | -1.69E-46 |
| MS.gene058233 | MS.gene52238 | 0.891482 | 3.82E-74 | -1.69E-46 |
| MS.gene058276 | MS.gene52238 | 0.828661 | 7.94E-55 | -1.69E-46 |
| MS.gene058293 | MS.gene52238 | 0.856217 | 3.73E-62 | -1.69E-46 |
| MS.gene058365 | MS.gene52238 | 0.834099 | 3.65E-56 | -1.69E-46 |
| MS.gene058660 | MS.gene52238 | 0.891323 | 4.41E-74 | -1.69E-46 |
| MS.gene058749 | MS.gene52238 | 0.820343 | 7.21E-53 | -1.69E-46 |
| MS.gene058787 | MS.gene52238 | 0.853468 | 2.34E-61 | -1.69E-46 |
| MS.gene058845 | MS.gene52238 | 0.861484 | 9.93E-64 | -1.69E-46 |
| MS.gene058928 | MS.gene52238 | 0.822458 | 2.34E-53 | -1.69E-46 |
| MS.gene05907 | MS.gene52238 | 0.882806 | 7.65E-71 | -1.69E-46 |
| MS.gene059228 | MS.gene52238 | 0.854292 | 1.36E-61 | -1.69E-46 |
| MS.gene059285 | MS.gene52238 | 0.813026 | 3.15E-51 | -1.69E-46 |
| MS.gene059294 | MS.gene52238 | 0.855726 | 5.20E-62 | -1.69E-46 |
| MS.gene059326 | MS.gene52238 | 0.836829 | 7.44E-57 | -1.69E-46 |
| MS.gene059342 | MS.gene52238 | 0.811157 | 8.06E-51 | -1.69E-46 |
| MS.gene059518 | MS.gene52238 | 0.877141 | 7.97E-69 | -1.69E-46 |
| MS.gene059536 | MS.gene52238 | 0.806977 | 6.33E-50 | -1.69E-46 |
| MS.gene059597 | MS.gene52238 | 0.872297 | 3.54E-67 | -1.69E-46 |
| MS.gene05959 | MS.gene52238 | 0.818391 | 2.01E-52 | -1.69E-46 |
| MS.gene059676 | MS.gene52238 | 0.83989 | 1.21E-57 | -1.69E-46 |
| MS.gene059688 | MS.gene52238 | 0.868453 | 6.46E-66 | -1.69E-46 |
| MS.gene059692 | MS.gene52238 | 0.897491 | 1.33E-76 | -1.69E-46 |
| MS.gene059695 | MS.gene52238 | 0.893768 | 4.62E-75 | -1.69E-46 |
| MS.gene059708 | MS.gene52238 | 0.837866 | 4.04E-57 | -1.69E-46 |
| MS.gene05984 | MS.gene52238 | 0.870912 | 1.02E-66 | -1.69E-46 |
| MS.gene059894 | MS.gene52238 | 0.913721 | 4.43E-84 | -1.69E-46 |
| MS.gene059899 | MS.gene52238 | 0.811363 | 7.27E-51 | -1.69E-46 |
| MS.gene059960 | MS.gene52238 | 0.820697 | 5.98E-53 | -1.69E-46 |
| MS.gene059974 | MS.gene52238 | 0.837422 | 5.25E-57 | -1.69E-46 |
| MS.gene060005 | MS.gene52238 | 0.853141 | 2.91E-61 | -1.69E-46 |
| MS.gene06037 | MS.gene52238 | 0.908646 | 1.36E-81 | -1.69E-46 |
| MS.gene060403 | MS.gene52238 | 0.803633 | 3.18E-49 | -1.69E-46 |
| MS.gene060407 | MS.gene52238 | 0.832596 | 8.64E-56 | -1.69E-46 |
| MS.gene060476 | MS.gene52238 | 0.865072 | 7.70E-65 | -1.69E-46 |
| MS.gene060804 | MS.gene52238 | 0.821141 | 4.73E-53 | -1.69E-46 |
| MS.gene06090 | MS.gene52238 | 0.812054 | 5.14E-51 | -1.69E-46 |
| MS.gene061049 | MS.gene52238 | 0.926181 | 6.67E-91 | -1.69E-46 |
| MS.gene061051 | MS.gene52238 | -0.853672 | 2.05E-61 | -1.69E-46 |
| MS.gene061112 | MS.gene52238 | 0.859277 | 4.62E-63 | -1.69E-46 |
| MS.gene061200 | MS.gene52238 | 0.802756 | 4.82E-49 | -1.69E-46 |
| MS.gene061265 | MS.gene52238 | 0.857074 | 2.09E-62 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene071821 | MS.gene52238 | PPI |
| MS.gene023869 | MS.gene52238 | PPI |
| MS.gene019617 | MS.gene52238 | PPI |
| MS.gene27725 | MS.gene52238 | PPI |
| MS.gene056772 | MS.gene52238 | PPI |
| MS.gene069208 | MS.gene52238 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene52238.t1 | MTR_7g077120 | 96.821 | 346 | 11 | 0 | 1 | 346 | 1 | 346 | 0.0 | 672 |
| MS.gene52238.t1 | MTR_8g031100 | 63.143 | 350 | 118 | 10 | 1 | 346 | 1 | 343 | 1.54e-119 | 348 |
| MS.gene52238.t1 | MTR_5g010330 | 45.455 | 352 | 155 | 14 | 1 | 346 | 1 | 321 | 5.28e-74 | 232 |
| MS.gene52238.t1 | MTR_8g098390 | 40.336 | 357 | 196 | 8 | 1 | 346 | 1 | 351 | 4.15e-56 | 186 |
| MS.gene52238.t1 | MTR_7g074935 | 45.690 | 232 | 116 | 3 | 85 | 315 | 56 | 278 | 9.13e-49 | 167 |
| MS.gene52238.t1 | MTR_1g061530 | 43.814 | 194 | 100 | 3 | 89 | 273 | 65 | 258 | 1.26e-48 | 167 |
| MS.gene52238.t1 | MTR_1g076710 | 45.413 | 218 | 101 | 3 | 88 | 288 | 48 | 264 | 9.85e-46 | 159 |
| MS.gene52238.t1 | MTR_4g098460 | 52.318 | 151 | 65 | 2 | 126 | 276 | 56 | 199 | 2.72e-43 | 151 |
| MS.gene52238.t1 | MTR_8g036160 | 46.445 | 211 | 103 | 3 | 87 | 290 | 69 | 276 | 5.55e-42 | 150 |
| MS.gene52238.t1 | MTR_4g101990 | 47.222 | 216 | 104 | 5 | 80 | 285 | 61 | 276 | 6.47e-42 | 149 |
| MS.gene52238.t1 | MTR_4g098460 | 50.641 | 156 | 65 | 3 | 126 | 276 | 56 | 204 | 5.10e-41 | 145 |
| MS.gene52238.t1 | MTR_6g061670 | 42.991 | 214 | 112 | 4 | 82 | 287 | 44 | 255 | 1.10e-37 | 137 |
| MS.gene52238.t1 | MTR_6g061670 | 41.553 | 219 | 113 | 4 | 82 | 287 | 44 | 260 | 1.21e-36 | 134 |
| MS.gene52238.t1 | MTR_5g011680 | 35.714 | 238 | 117 | 5 | 89 | 290 | 46 | 283 | 1.52e-33 | 125 |
| MS.gene52238.t1 | MTR_7g116320 | 39.904 | 208 | 115 | 3 | 86 | 292 | 71 | 269 | 4.75e-31 | 120 |
| MS.gene52238.t1 | MTR_4g055803 | 45.411 | 207 | 98 | 9 | 88 | 287 | 59 | 257 | 1.20e-30 | 121 |
| MS.gene52238.t1 | MTR_4g055833 | 45.146 | 206 | 100 | 7 | 88 | 287 | 56 | 254 | 1.71e-30 | 119 |
| MS.gene52238.t1 | MTR_7g116320 | 41.622 | 185 | 104 | 2 | 86 | 269 | 71 | 252 | 2.46e-29 | 114 |
| MS.gene52238.t1 | MTR_1g079780 | 37.634 | 186 | 108 | 4 | 89 | 272 | 43 | 222 | 1.70e-28 | 113 |
| MS.gene52238.t1 | MTR_5g011620 | 40.642 | 187 | 103 | 4 | 89 | 273 | 46 | 226 | 1.75e-27 | 114 |
| MS.gene52238.t1 | MTR_1g038960 | 37.566 | 189 | 107 | 5 | 87 | 272 | 83 | 263 | 5.00e-26 | 106 |
| MS.gene52238.t1 | MTR_4g055813 | 45.455 | 132 | 64 | 6 | 159 | 287 | 21 | 147 | 5.91e-26 | 105 |
| MS.gene52238.t1 | MTR_5g013390 | 34.483 | 203 | 121 | 6 | 87 | 284 | 79 | 274 | 7.10e-25 | 103 |
| MS.gene52238.t1 | MTR_5g041430 | 35.071 | 211 | 114 | 8 | 68 | 268 | 25 | 222 | 4.91e-24 | 100 |
| MS.gene52238.t1 | MTR_5g014360 | 36.869 | 198 | 109 | 5 | 90 | 279 | 121 | 310 | 6.61e-24 | 101 |
| MS.gene52238.t1 | MTR_5g011610 | 38.129 | 139 | 79 | 2 | 152 | 288 | 51 | 184 | 1.80e-23 | 99.4 |
| MS.gene52238.t1 | MTR_5g011610 | 37.037 | 108 | 65 | 1 | 142 | 249 | 197 | 301 | 1.23e-16 | 80.1 |
| MS.gene52238.t1 | MTR_4g055705 | 36.111 | 216 | 110 | 6 | 88 | 284 | 55 | 261 | 1.01e-22 | 97.1 |
| MS.gene52238.t1 | MTR_3g100470 | 33.880 | 183 | 105 | 4 | 127 | 296 | 74 | 253 | 4.14e-22 | 95.1 |
| MS.gene52238.t1 | MTR_6g060670 | 36.232 | 207 | 114 | 6 | 83 | 288 | 114 | 303 | 9.34e-22 | 94.4 |
| MS.gene52238.t1 | MTR_1g038990 | 33.862 | 189 | 97 | 7 | 87 | 272 | 80 | 243 | 1.00e-19 | 89.0 |
| MS.gene52238.t1 | MTR_3g023560 | 37.190 | 121 | 70 | 2 | 155 | 272 | 60 | 177 | 1.41e-18 | 84.3 |
| MS.gene52238.t1 | MTR_1g044155 | 38.514 | 148 | 85 | 2 | 125 | 272 | 124 | 265 | 3.09e-18 | 85.1 |
| MS.gene52238.t1 | MTR_5g066020 | 37.795 | 127 | 75 | 3 | 148 | 272 | 71 | 195 | 1.29e-17 | 81.6 |
| MS.gene52238.t1 | MTR_1g079810 | 36.207 | 174 | 98 | 3 | 127 | 300 | 74 | 234 | 4.03e-17 | 81.3 |
| MS.gene52238.t1 | MTR_1g073860 | 37.838 | 148 | 86 | 2 | 125 | 272 | 92 | 233 | 9.07e-17 | 80.5 |
| MS.gene52238.t1 | MTR_3g068035 | 39.370 | 127 | 71 | 2 | 160 | 283 | 109 | 232 | 1.02e-16 | 80.1 |
| MS.gene52238.t1 | MTR_3g116100 | 33.721 | 172 | 90 | 5 | 124 | 275 | 90 | 257 | 1.93e-16 | 79.3 |
| MS.gene52238.t1 | MTR_8g036060 | 34.375 | 160 | 96 | 3 | 127 | 283 | 86 | 239 | 1.36e-15 | 76.6 |
| MS.gene52238.t1 | MTR_5g091630 | 32.203 | 177 | 109 | 3 | 127 | 303 | 47 | 212 | 3.21e-14 | 72.0 |
| MS.gene52238.t1 | MTR_5g011520 | 32.450 | 151 | 96 | 2 | 122 | 272 | 95 | 239 | 1.43e-13 | 70.9 |
| MS.gene52238.t1 | MTR_7g080980 | 38.938 | 113 | 66 | 1 | 160 | 272 | 87 | 196 | 5.64e-13 | 68.6 |
| MS.gene52238.t1 | MTR_4g098450 | 40.000 | 115 | 62 | 2 | 160 | 272 | 106 | 215 | 7.17e-13 | 68.6 |
| MS.gene52238.t1 | MTR_5g011700 | 38.947 | 95 | 55 | 1 | 185 | 279 | 28 | 119 | 1.75e-11 | 62.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene52238.t1 | AT2G45850 | 50.139 | 359 | 155 | 9 | 1 | 346 | 1 | 348 | 7.94e-89 | 271 |
| MS.gene52238.t1 | AT2G45850 | 50.139 | 359 | 155 | 9 | 1 | 346 | 1 | 348 | 7.94e-89 | 271 |
| MS.gene52238.t1 | AT3G61310 | 46.594 | 367 | 162 | 12 | 1 | 346 | 1 | 354 | 9.14e-77 | 240 |
| MS.gene52238.t1 | AT2G45850 | 50.530 | 283 | 123 | 5 | 1 | 272 | 1 | 277 | 2.98e-66 | 210 |
| MS.gene52238.t1 | AT1G63470 | 44.765 | 277 | 133 | 6 | 88 | 346 | 104 | 378 | 6.19e-61 | 200 |
| MS.gene52238.t1 | AT1G63480 | 39.459 | 370 | 191 | 11 | 1 | 346 | 1 | 361 | 6.37e-58 | 191 |
| MS.gene52238.t1 | AT1G63480 | 39.459 | 370 | 191 | 11 | 1 | 346 | 1 | 361 | 6.37e-58 | 191 |
| MS.gene52238.t1 | AT1G63480 | 39.560 | 364 | 187 | 11 | 7 | 346 | 1 | 355 | 8.29e-57 | 188 |
| MS.gene52238.t1 | AT1G63480 | 39.560 | 364 | 187 | 11 | 7 | 346 | 1 | 355 | 8.29e-57 | 188 |
| MS.gene52238.t1 | AT1G63480 | 39.560 | 364 | 187 | 11 | 7 | 346 | 1 | 355 | 8.29e-57 | 188 |
| MS.gene52238.t1 | AT1G63480 | 39.560 | 364 | 187 | 11 | 7 | 346 | 1 | 355 | 8.29e-57 | 188 |
| MS.gene52238.t1 | AT1G63480 | 39.560 | 364 | 187 | 11 | 7 | 346 | 1 | 355 | 8.29e-57 | 188 |
| MS.gene52238.t1 | AT4G12080 | 40.636 | 283 | 132 | 8 | 84 | 343 | 84 | 353 | 1.37e-53 | 180 |
| MS.gene52238.t1 | AT4G25320 | 44.019 | 209 | 105 | 2 | 84 | 280 | 81 | 289 | 1.27e-50 | 174 |
| MS.gene52238.t1 | AT2G33620 | 49.741 | 193 | 85 | 6 | 86 | 273 | 94 | 279 | 1.05e-48 | 167 |
| MS.gene52238.t1 | AT2G33620 | 49.741 | 193 | 85 | 6 | 86 | 273 | 94 | 279 | 1.05e-48 | 167 |
| MS.gene52238.t1 | AT2G33620 | 49.741 | 193 | 85 | 6 | 86 | 273 | 94 | 279 | 1.05e-48 | 167 |
| MS.gene52238.t1 | AT2G33620 | 49.741 | 193 | 85 | 6 | 86 | 273 | 94 | 279 | 1.05e-48 | 167 |
| MS.gene52238.t1 | AT4G17950 | 42.083 | 240 | 99 | 8 | 86 | 295 | 128 | 357 | 7.50e-46 | 162 |
| MS.gene52238.t1 | AT5G51590 | 41.818 | 220 | 96 | 3 | 88 | 275 | 77 | 296 | 4.58e-45 | 159 |
| MS.gene52238.t1 | AT4G22770 | 44.231 | 208 | 104 | 4 | 88 | 284 | 71 | 277 | 4.37e-43 | 152 |
| MS.gene52238.t1 | AT4G22770 | 44.231 | 208 | 104 | 4 | 88 | 284 | 71 | 277 | 4.37e-43 | 152 |
| MS.gene52238.t1 | AT5G62260 | 40.930 | 215 | 109 | 4 | 88 | 285 | 75 | 288 | 7.80e-43 | 153 |
| MS.gene52238.t1 | AT5G62260 | 40.930 | 215 | 109 | 4 | 88 | 285 | 75 | 288 | 7.80e-43 | 153 |
| MS.gene52238.t1 | AT5G46640 | 45.909 | 220 | 96 | 5 | 88 | 292 | 101 | 312 | 1.54e-41 | 149 |
| MS.gene52238.t1 | AT5G62260 | 41.624 | 197 | 97 | 4 | 88 | 267 | 75 | 270 | 8.23e-39 | 139 |
| MS.gene52238.t1 | AT3G04590 | 40.488 | 205 | 93 | 4 | 86 | 278 | 102 | 289 | 3.57e-38 | 138 |
| MS.gene52238.t1 | AT3G04590 | 41.038 | 212 | 82 | 4 | 86 | 278 | 102 | 289 | 3.77e-37 | 138 |
| MS.gene52238.t1 | AT4G00200 | 42.661 | 218 | 101 | 4 | 89 | 294 | 56 | 261 | 8.34e-36 | 132 |
| MS.gene52238.t1 | AT4G00200 | 42.661 | 218 | 101 | 4 | 89 | 294 | 56 | 261 | 8.34e-36 | 132 |
| MS.gene52238.t1 | AT5G49700 | 33.140 | 172 | 105 | 4 | 127 | 291 | 56 | 224 | 8.64e-21 | 90.9 |
| MS.gene52238.t1 | AT3G60870 | 36.301 | 146 | 85 | 3 | 127 | 272 | 59 | 196 | 2.55e-20 | 89.4 |
| MS.gene52238.t1 | AT2G36560 | 31.731 | 208 | 116 | 6 | 80 | 285 | 51 | 234 | 1.04e-17 | 84.7 |
| MS.gene52238.t1 | AT4G14465 | 34.759 | 187 | 113 | 4 | 127 | 313 | 67 | 244 | 1.47e-17 | 82.0 |
| MS.gene52238.t1 | AT1G76500 | 35.119 | 168 | 93 | 4 | 114 | 272 | 60 | 220 | 2.99e-17 | 81.6 |
| MS.gene52238.t1 | AT1G14490 | 33.673 | 196 | 104 | 7 | 106 | 291 | 11 | 190 | 6.23e-17 | 79.3 |
| MS.gene52238.t1 | AT1G14490 | 33.333 | 174 | 98 | 5 | 128 | 291 | 6 | 171 | 8.15e-17 | 78.6 |
| MS.gene52238.t1 | AT3G55560 | 43.860 | 114 | 62 | 1 | 160 | 273 | 118 | 229 | 1.28e-16 | 79.7 |
| MS.gene52238.t1 | AT2G45430 | 34.807 | 181 | 103 | 6 | 127 | 300 | 89 | 261 | 2.26e-15 | 76.3 |
| MS.gene52238.t1 | AT2G35270 | 36.486 | 148 | 84 | 3 | 127 | 272 | 78 | 217 | 1.30e-14 | 73.6 |
| MS.gene52238.t1 | AT5G28590 | 37.143 | 140 | 63 | 3 | 154 | 293 | 27 | 141 | 1.77e-14 | 72.0 |
| MS.gene52238.t1 | AT3G04570 | 35.714 | 154 | 85 | 3 | 127 | 272 | 80 | 227 | 1.92e-14 | 73.6 |
| MS.gene52238.t1 | AT4G12050 | 38.095 | 147 | 84 | 3 | 127 | 272 | 118 | 258 | 2.06e-14 | 73.6 |
| MS.gene52238.t1 | AT4G22810 | 36.242 | 149 | 86 | 3 | 127 | 272 | 105 | 247 | 1.64e-13 | 70.9 |
| MS.gene52238.t1 | AT2G42940 | 31.548 | 168 | 106 | 3 | 127 | 291 | 53 | 214 | 4.72e-13 | 68.6 |
| MS.gene52238.t1 | AT4G17800 | 39.130 | 115 | 63 | 2 | 160 | 272 | 112 | 221 | 1.30e-11 | 65.1 |
| MS.gene52238.t1 | AT4G35390 | 33.333 | 156 | 93 | 4 | 127 | 277 | 63 | 212 | 1.31e-11 | 65.1 |
| MS.gene52238.t1 | AT1G20900 | 35.119 | 168 | 94 | 3 | 114 | 272 | 73 | 234 | 1.82e-11 | 64.7 |
Find 105 sgRNAs with CRISPR-Local
Find 303 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTCGTGAGCCTTCAATTTC+AGG | 0.181190 | 7.4:+28755601 | MS.gene52238:CDS |
| TGATGATTGGGAGCTTTCTT+TGG | 0.202344 | 7.4:+28756780 | MS.gene52238:CDS |
| GGACTAAGTATTTCCCTTCT+TGG | 0.226477 | 7.4:+28756378 | MS.gene52238:CDS |
| AAACAACAATTGGCTTCTTT+TGG | 0.260196 | 7.4:+28752466 | MS.gene52238:CDS |
| GGTTCTGATGGCCGCGTCTT+TGG | 0.261926 | 7.4:+28756399 | MS.gene52238:CDS |
| GATGATTGGGAGCTTTCTTT+GGG | 0.283569 | 7.4:+28756781 | MS.gene52238:CDS |
| CCGCCTTGCGTCACGGTTCC+AGG | 0.289919 | 7.4:-28752403 | None:intergenic |
| TGTTACGTGCCTACTGAAAA+TGG | 0.318751 | 7.4:+28756333 | MS.gene52238:CDS |
| AGAGGAAGGCCGAGGAAATA+TGG | 0.336868 | 7.4:+28752325 | MS.gene52238:CDS |
| GGTCATACTGTTGTTCCGTC+TGG | 0.360946 | 7.4:+28752283 | MS.gene52238:CDS |
| AGCATCGCGTCAGATGGATA+TGG | 0.362505 | 7.4:+28756961 | MS.gene52238:CDS |
| CAGCCTGACATGCTCATTAT+CGG | 0.372820 | 7.4:-28756312 | None:intergenic |
| CAGAGAGTACTACCTGGTTC+TGG | 0.381741 | 7.4:+28752106 | MS.gene52238:CDS |
| GAGTTGATGTCTGGTTCAGC+TGG | 0.406727 | 7.4:+28754655 | MS.gene52238:CDS |
| GTCATACTGTTGTTCCGTCT+GGG | 0.408582 | 7.4:+28752284 | MS.gene52238:CDS |
| CATATAGTAAGATGCAGAAT+TGG | 0.410161 | 7.4:-28752080 | None:intergenic |
| TGTTGTTTCTTCCCACTCCC+AGG | 0.412423 | 7.4:-28752451 | None:intergenic |
| TGCTGCTGACCAAGGACTTA+AGG | 0.412506 | 7.4:-28756942 | None:intergenic |
| GGACGCCCTCTCCCTCGTTT+CGG | 0.424030 | 7.4:-28752427 | None:intergenic |
| CTTTCTTTGGGGTAGATTGA+AGG | 0.434019 | 7.4:+28756793 | MS.gene52238:CDS |
| TCACGATTGTAGGTGATGAT+TGG | 0.434323 | 7.4:+28756767 | MS.gene52238:intron |
| CATGGATCACGGGGACCATA+TGG | 0.448828 | 7.4:+28752051 | None:intergenic |
| ATTTCCCTTCTTGGTTCTGA+TGG | 0.452001 | 7.4:+28756387 | MS.gene52238:CDS |
| CACGATTGTAGGTGATGATT+GGG | 0.453280 | 7.4:+28756768 | MS.gene52238:intron |
| CAACCTCATCCTTAAGTCCT+TGG | 0.455300 | 7.4:+28756933 | MS.gene52238:CDS |
| TTACTAGATGGTGTTGGACT+TGG | 0.455387 | 7.4:-28752379 | None:intergenic |
| TGTTGCTGCCAGTCCCGTCC+AGG | 0.459424 | 7.4:+28756443 | MS.gene52238:CDS |
| CTGGATTGAAATGGTAGATT+GGG | 0.463800 | 7.4:-28752178 | None:intergenic |
| TAAAATAACCTGGACGGGAC+TGG | 0.464159 | 7.4:-28756451 | None:intergenic |
| CCACCAATGCTGGATTGAAA+TGG | 0.467476 | 7.4:-28752187 | None:intergenic |
| GGCGGTCCGAAACGAGGGAG+AGG | 0.467856 | 7.4:+28752421 | MS.gene52238:CDS |
| AAAGTAAATGCATGGATCAC+GGG | 0.473691 | 7.4:+28752041 | None:intergenic |
| CAGAATTGGATAACGCCATA+TGG | 0.473958 | 7.4:-28752066 | None:intergenic |
| GCTGGATTGAAATGGTAGAT+TGG | 0.474439 | 7.4:-28752179 | None:intergenic |
| ATGTCTGGTTCAGCTGGGAC+GGG | 0.475635 | 7.4:+28754661 | MS.gene52238:CDS |
| CGCTGACAGAGTTGTGTCAT+TGG | 0.476854 | 7.4:+28752348 | MS.gene52238:CDS |
| CAATCCAGCATTGGTGGTGG+TGG | 0.477009 | 7.4:+28752193 | MS.gene52238:CDS |
| TTTCCGATAATGAGCATGTC+AGG | 0.479255 | 7.4:+28756309 | MS.gene52238:CDS |
| CCAACACCATCTAGTAATCC+TGG | 0.482215 | 7.4:+28752385 | MS.gene52238:CDS |
| GTTGTTTCTTCCCACTCCCA+GGG | 0.482907 | 7.4:-28752450 | None:intergenic |
| CGCGTCTTTGGTGGAGCAGT+TGG | 0.485980 | 7.4:+28756411 | MS.gene52238:CDS |
| ACTACCACCACCACCAATGC+TGG | 0.491763 | 7.4:-28752197 | None:intergenic |
| GTCTTTGGTGGAGCAGTTGG+TGG | 0.493504 | 7.4:+28756414 | MS.gene52238:CDS |
| GATGTCTGGTTCAGCTGGGA+CGG | 0.495190 | 7.4:+28754660 | MS.gene52238:CDS |
| CCATTTCAATCCAGCATTGG+TGG | 0.497348 | 7.4:+28752187 | MS.gene52238:CDS |
| TCTGATGGCCGCGTCTTTGG+TGG | 0.502729 | 7.4:+28756402 | MS.gene52238:CDS |
| CGCGGCCATCAGAACCAAGA+AGG | 0.508032 | 7.4:-28756392 | None:intergenic |
| AGGTGGCACTCTCAAATATG+AGG | 0.514903 | 7.4:+28755621 | MS.gene52238:CDS |
| AGAGTGCCACCTGAAATTGA+AGG | 0.519251 | 7.4:-28755610 | None:intergenic |
| GTCAGCAGCATCGCGTCAGA+TGG | 0.520208 | 7.4:+28756955 | MS.gene52238:CDS |
| GCATCGCGTCAGATGGATAT+GGG | 0.520420 | 7.4:+28756962 | MS.gene52238:CDS |
| GAATATAAAATAACCTGGAC+GGG | 0.525441 | 7.4:-28756456 | None:intergenic |
| TTTCGGACCGCCTTGCGTCA+CGG | 0.531390 | 7.4:-28752410 | None:intergenic |
| AAAGGAAGAGAGGAAGGCCG+AGG | 0.541174 | 7.4:+28752317 | MS.gene52238:CDS |
| AACACTACCGCTAGAATCAT+CGG | 0.542072 | 7.4:+28752231 | MS.gene52238:CDS |
| GAGACTGTGAAAAGGAAGAG+AGG | 0.545044 | 7.4:+28752307 | MS.gene52238:CDS |
| CTACCATTTCAATCCAGCAT+TGG | 0.548911 | 7.4:+28752184 | MS.gene52238:CDS |
| TCAGGTTGTGCTCCAGAACC+AGG | 0.551315 | 7.4:-28752118 | None:intergenic |
| CAAGGACTTAAGGATGAGGT+TGG | 0.552528 | 7.4:-28756932 | None:intergenic |
| TTTCAATCCAGCATTGGTGG+TGG | 0.552966 | 7.4:+28752190 | MS.gene52238:CDS |
| GAAAGTAAATGCATGGATCA+CGG | 0.553146 | 7.4:+28752040 | None:intergenic |
| GAGTGGGAAGAAACAACAAT+TGG | 0.556408 | 7.4:+28752456 | MS.gene52238:CDS |
| GAAATGCTATTCAGTGCAGC+TGG | 0.557516 | 7.4:-28756890 | None:intergenic |
| CTGTGAAAAGGAAGAGAGGA+AGG | 0.568746 | 7.4:+28752311 | MS.gene52238:CDS |
| CATGTCATCTACATTGCAAG+TGG | 0.576379 | 7.4:+28754694 | MS.gene52238:CDS |
| TCATCGGCAATTTCATCTCA+AGG | 0.576639 | 7.4:+28752247 | MS.gene52238:CDS |
| GGCTCCTCACGGAACCGAGA+TGG | 0.579641 | 7.4:+28756354 | MS.gene52238:CDS |
| AGAATATAAAATAACCTGGA+CGG | 0.583629 | 7.4:-28756457 | None:intergenic |
| ACGGTTCCAGGATTACTAGA+TGG | 0.584014 | 7.4:-28752391 | None:intergenic |
| GCGGCCATCAGAACCAAGAA+GGG | 0.584159 | 7.4:-28756391 | None:intergenic |
| CTGTCAGCGCCATATTTCCT+CGG | 0.584925 | 7.4:-28752334 | None:intergenic |
| ACGCAAGGCGGTCCGAAACG+AGG | 0.588728 | 7.4:+28752415 | MS.gene52238:CDS |
| CGCAAGGCGGTCCGAAACGA+GGG | 0.589511 | 7.4:+28752416 | MS.gene52238:CDS |
| GCGGTCCGAAACGAGGGAGA+GGG | 0.589994 | 7.4:+28752422 | MS.gene52238:CDS |
| CGTCTGGGGAGACTGTGAAA+AGG | 0.590596 | 7.4:+28752299 | MS.gene52238:CDS |
| GCATTAAATCAATGTCAGCA+TGG | 0.592021 | 7.4:-28756991 | None:intergenic |
| TGACGCGATGCTGCTGACCA+AGG | 0.593942 | 7.4:-28756950 | None:intergenic |
| CGTGAGCCTTCAATTTCAGG+TGG | 0.598119 | 7.4:+28755604 | MS.gene52238:CDS |
| CCAGGATTACTAGATGGTGT+TGG | 0.598387 | 7.4:-28752385 | None:intergenic |
| CATTAAATCAATGTCAGCAT+GGG | 0.598597 | 7.4:-28756990 | None:intergenic |
| TCCTCACGGAACCGAGATGG+TGG | 0.600178 | 7.4:+28756357 | MS.gene52238:CDS |
| CTCGGCGAAACATGTAACTC+AGG | 0.601454 | 7.4:-28752136 | None:intergenic |
| GGTGGTGGTGGTAGTAACAT+TGG | 0.610075 | 7.4:+28752205 | MS.gene52238:CDS |
| AATCCTGGAACCGTGACGCA+AGG | 0.612484 | 7.4:+28752400 | MS.gene52238:CDS |
| TCATACTGTTGTTCCGTCTG+GGG | 0.616551 | 7.4:+28752285 | MS.gene52238:CDS |
| ACGGGACTGGCAGCAACAAG+CGG | 0.620950 | 7.4:-28756438 | None:intergenic |
| TTGTTTCTTCCCACTCCCAG+GGG | 0.621601 | 7.4:-28752449 | None:intergenic |
| GAAAGCTCAGAGGATGCAGA+AGG | 0.626942 | 7.4:+28756833 | MS.gene52238:CDS |
| CTACTGAAAATGGCTCCTCA+CGG | 0.628279 | 7.4:+28756343 | MS.gene52238:CDS |
| AAATACTTAGTCCACCATCT+CGG | 0.629124 | 7.4:-28756368 | None:intergenic |
| AGTTGATGTCTGGTTCAGCT+GGG | 0.632427 | 7.4:+28754656 | MS.gene52238:CDS |
| TGACCAAGGACTTAAGGATG+AGG | 0.635165 | 7.4:-28756936 | None:intergenic |
| AAGTAAATGCATGGATCACG+GGG | 0.639754 | 7.4:+28752042 | None:intergenic |
| ATGATTGGGAGCTTTCTTTG+GGG | 0.643354 | 7.4:+28756782 | MS.gene52238:CDS |
| GCTGTTGAATCAGATCATCA+AGG | 0.649232 | 7.4:+28756857 | MS.gene52238:CDS |
| TCTCAAGGTGTCAATGTGAG+TGG | 0.652035 | 7.4:+28752262 | MS.gene52238:CDS |
| CTTGCAATGTAGATGACATG+AGG | 0.652776 | 7.4:-28754691 | None:intergenic |
| CAACTGCTCCACCAAAGACG+CGG | 0.658039 | 7.4:-28756410 | None:intergenic |
| GCTGACATTGATTTAATGCG+TGG | 0.670344 | 7.4:+28756995 | MS.gene52238:CDS |
| TTAGACAGTTGATTAAAACT+CGG | 0.670482 | 7.4:-28752154 | None:intergenic |
| ATGCAGCAGAGAGTACTACC+TGG | 0.672500 | 7.4:+28752100 | MS.gene52238:CDS |
| TCCACCATCTCGGTTCCGTG+AGG | 0.687156 | 7.4:-28756358 | None:intergenic |
| TGTTTCTTCCCACTCCCAGG+GGG | 0.696825 | 7.4:-28752448 | None:intergenic |
| CCTGGAACCGTGACGCAAGG+CGG | 0.700364 | 7.4:+28752403 | MS.gene52238:CDS |
| GAAATTGCCGATGATTCTAG+CGG | 0.710270 | 7.4:-28752238 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATATACATTTATCTTAAA+AGG | + | chr7.4:28755246-28755265 | MS.gene52238:intron | 10.0% |
| !! | ATTTAAATAGGTAAAATATA+AGG | - | chr7.4:28755032-28755051 | None:intergenic | 10.0% |
| !!! | AAGTTGATATTTATTTAAAT+AGG | - | chr7.4:28755044-28755063 | None:intergenic | 10.0% |
| !! | AAATCTGATTACAATTAAAT+TGG | + | chr7.4:28754177-28754196 | MS.gene52238:intron | 15.0% |
| !! | ACTAATCAGTATAAATATTT+AGG | - | chr7.4:28753312-28753331 | None:intergenic | 15.0% |
| !! | ATAAAAAAAACAAAAACAAC+TGG | + | chr7.4:28753434-28753453 | MS.gene52238:intron | 15.0% |
| !! | ATATGTTGTTAATTGTTATA+AGG | + | chr7.4:28756222-28756241 | MS.gene52238:intron | 15.0% |
| !! | TAATTAATCAATAACTAAGA+GGG | - | chr7.4:28755732-28755751 | None:intergenic | 15.0% |
| !! | TATGACATTTATGTAAATAT+TGG | + | chr7.4:28755453-28755472 | MS.gene52238:intron | 15.0% |
| !! | TCTATATAATTCTACAATTA+CGG | - | chr7.4:28754247-28754266 | None:intergenic | 15.0% |
| !! | TTAATTAATCAATAACTAAG+AGG | - | chr7.4:28755733-28755752 | None:intergenic | 15.0% |
| !!! | AACTTACATTGAATTTTTAT+TGG | + | chr7.4:28753361-28753380 | MS.gene52238:intron | 15.0% |
| !!! | ACTTACATTGAATTTTTATT+GGG | + | chr7.4:28753362-28753381 | MS.gene52238:intron | 15.0% |
| !!! | ATAAGTATGATTGTTTTTAA+GGG | + | chr7.4:28753643-28753662 | MS.gene52238:intron | 15.0% |
| !!! | CATTTTAAATTATGAATGAA+GGG | + | chr7.4:28754154-28754173 | MS.gene52238:intron | 15.0% |
| !!! | TACAATTTAAGAATATTTTG+TGG | + | chr7.4:28755786-28755805 | MS.gene52238:intron | 15.0% |
| !!! | TCATTTTAAATTATGAATGA+AGG | + | chr7.4:28754153-28754172 | MS.gene52238:intron | 15.0% |
| !!! | TTTGAATCAATTTTTCAAAT+TGG | + | chr7.4:28752566-28752585 | MS.gene52238:intron | 15.0% |
| !!! | TTTTTTTCTTTCTATTAACT+TGG | + | chr7.4:28754730-28754749 | MS.gene52238:intron | 15.0% |
| !! | AAGATGCAAATACATTTATT+AGG | - | chr7.4:28754965-28754984 | None:intergenic | 20.0% |
| !! | AAGTAGAATATAAAATAACC+TGG | - | chr7.4:28756464-28756483 | None:intergenic | 20.0% |
| !! | CTGTATATCTCTTATTATTA+TGG | + | chr7.4:28753197-28753216 | MS.gene52238:intron | 20.0% |
| !! | TAACAATTAACAACATATAG+TGG | - | chr7.4:28756220-28756239 | None:intergenic | 20.0% |
| !! | TATGAAAAAGCTGAAATATA+TGG | + | chr7.4:28753006-28753025 | MS.gene52238:intron | 20.0% |
| !! | TCTACTAAAACAAAGTAAAT+TGG | + | chr7.4:28756001-28756020 | MS.gene52238:intron | 20.0% |
| !! | TTGTTAACAGTGTAAATTTA+GGG | - | chr7.4:28756526-28756545 | None:intergenic | 20.0% |
| !! | TTGTTACATAAAGACATATA+TGG | + | chr7.4:28755668-28755687 | MS.gene52238:intron | 20.0% |
| !! | TTTGTTAACAGTGTAAATTT+AGG | - | chr7.4:28756527-28756546 | None:intergenic | 20.0% |
| !!! | AAAAATTTTGACATTTTCTC+AGG | + | chr7.4:28755522-28755541 | MS.gene52238:CDS | 20.0% |
| !!! | AAGGTTGTGTTTAAAATATA+TGG | + | chr7.4:28752713-28752732 | MS.gene52238:intron | 20.0% |
| !!! | CATAAGTATGATTGTTTTTA+AGG | + | chr7.4:28753642-28753661 | MS.gene52238:intron | 20.0% |
| !!! | CTGTTCTCTAAATTTAATTT+TGG | + | chr7.4:28753965-28753984 | MS.gene52238:intron | 20.0% |
| !!! | GACAATCTAAAATATTTACA+TGG | + | chr7.4:28756660-28756679 | MS.gene52238:intron | 20.0% |
| !!! | GTATGTTTAAGCTTTATAAA+GGG | - | chr7.4:28752945-28752964 | None:intergenic | 20.0% |
| !!! | GTTTTATATGTTGTTAACTT+TGG | + | chr7.4:28754769-28754788 | MS.gene52238:intron | 20.0% |
| !!! | TACAATTAAATTGGTGATTA+TGG | + | chr7.4:28754186-28754205 | MS.gene52238:intron | 20.0% |
| !!! | TGTATGTTTAAGCTTTATAA+AGG | - | chr7.4:28752946-28752965 | None:intergenic | 20.0% |
| !!! | TTTTTGCACATATTTTGAAT+AGG | + | chr7.4:28756092-28756111 | MS.gene52238:intron | 20.0% |
| ! | AAAAACTTGGTTGCAAATAA+CGG | - | chr7.4:28755138-28755157 | None:intergenic | 25.0% |
| ! | AAAAAGTCAAAATGATTCCA+TGG | - | chr7.4:28756029-28756048 | None:intergenic | 25.0% |
| ! | AAACAATCATACTTATGTAG+TGG | - | chr7.4:28753639-28753658 | None:intergenic | 25.0% |
| ! | AAGAAAATAATGTAGGAAAG+GGG | + | chr7.4:28755333-28755352 | MS.gene52238:intron | 25.0% |
| ! | AAGAAAATACTGTAACAAAC+AGG | - | chr7.4:28752628-28752647 | None:intergenic | 25.0% |
| ! | ACTTAAATCACACATATGAT+TGG | - | chr7.4:28756556-28756575 | None:intergenic | 25.0% |
| ! | AGAAGAAAATAATGTAGGAA+AGG | + | chr7.4:28755331-28755350 | MS.gene52238:intron | 25.0% |
| ! | AGAATATAAAATAACCTGGA+CGG | - | chr7.4:28756460-28756479 | None:intergenic | 25.0% |
| ! | AGTGAAGAAGAAAATAATGT+AGG | + | chr7.4:28755326-28755345 | MS.gene52238:intron | 25.0% |
| ! | ATAAGGATTCTTATGTTTCA+GGG | - | chr7.4:28755015-28755034 | None:intergenic | 25.0% |
| ! | ATAATTCTACAATTACGGAA+AGG | - | chr7.4:28754242-28754261 | None:intergenic | 25.0% |
| ! | ATCAATATCATCATAACTCT+TGG | - | chr7.4:28755297-28755316 | None:intergenic | 25.0% |
| ! | ATCCTAATATACCCTTAAAA+TGG | + | chr7.4:28753673-28753692 | MS.gene52238:intron | 25.0% |
| ! | ATTACTGAATGTAATATGTC+GGG | + | chr7.4:28753333-28753352 | MS.gene52238:intron | 25.0% |
| ! | CAAAAGCTTACATGAAAAAT+TGG | - | chr7.4:28755820-28755839 | None:intergenic | 25.0% |
| ! | CATATCAACACACATTTATT+AGG | - | chr7.4:28754922-28754941 | None:intergenic | 25.0% |
| ! | GAAGAAAATAATGTAGGAAA+GGG | + | chr7.4:28755332-28755351 | MS.gene52238:intron | 25.0% |
| ! | GATGTCATAATGATATATGA+CGG | + | chr7.4:28754864-28754883 | MS.gene52238:intron | 25.0% |
| ! | GATTACTGAATGTAATATGT+CGG | + | chr7.4:28753332-28753351 | MS.gene52238:intron | 25.0% |
| ! | GCATGAAAGATATATGTATA+GGG | + | chr7.4:28752543-28752562 | MS.gene52238:intron | 25.0% |
| ! | GTAGTGGTATTTAAAAAGTT+TGG | + | chr7.4:28753908-28753927 | MS.gene52238:intron | 25.0% |
| ! | GTATGCAAACATATATGATT+GGG | + | chr7.4:28755957-28755976 | MS.gene52238:intron | 25.0% |
| ! | TACTGACATGAATATCAATT+TGG | + | chr7.4:28754034-28754053 | MS.gene52238:intron | 25.0% |
| ! | TATAAGGATTCTTATGTTTC+AGG | - | chr7.4:28755016-28755035 | None:intergenic | 25.0% |
| ! | TATGCAAACATATATGATTG+GGG | + | chr7.4:28755958-28755977 | MS.gene52238:intron | 25.0% |
| ! | TATGTGCAAAAAGCTAATAT+AGG | - | chr7.4:28756084-28756103 | None:intergenic | 25.0% |
| ! | TGCATGAAAGATATATGTAT+AGG | + | chr7.4:28752542-28752561 | MS.gene52238:intron | 25.0% |
| ! | TGTAATAATCAAAGTTGCAA+TGG | + | chr7.4:28754485-28754504 | MS.gene52238:intron | 25.0% |
| ! | TGTATGCAAACATATATGAT+TGG | + | chr7.4:28755956-28755975 | MS.gene52238:intron | 25.0% |
| ! | TTAGACAGTTGATTAAAACT+CGG | - | chr7.4:28752157-28752176 | None:intergenic | 25.0% |
| ! | TTTCAAATTGGTCATGAAAT+TGG | + | chr7.4:28752578-28752597 | MS.gene52238:intron | 25.0% |
| ! | TTTCATAAGCTTAAACAAAC+AGG | + | chr7.4:28753174-28753193 | MS.gene52238:intron | 25.0% |
| !! | GCATTTAAGTTCAAATGATT+TGG | + | chr7.4:28754072-28754091 | MS.gene52238:intron | 25.0% |
| !! | TAACTTTGGAAGAAACTATA+TGG | + | chr7.4:28754783-28754802 | MS.gene52238:intron | 25.0% |
| !!! | ATATATTTTAATTGCCACCT+TGG | + | chr7.4:28756265-28756284 | MS.gene52238:intron | 25.0% |
| !!! | TTAAGTGGTTACTTATTTTC+AGG | + | chr7.4:28754631-28754650 | MS.gene52238:intron | 25.0% |
| !!! | TTTAAGCACATATTTTGAGT+AGG | + | chr7.4:28756144-28756163 | MS.gene52238:intron | 25.0% |
| AACATAAAAGTCACGATTGT+AGG | + | chr7.4:28756757-28756776 | MS.gene52238:intron | 30.0% | |
| ACTATATGGAAAAGAGAGAA+AGG | + | chr7.4:28754797-28754816 | MS.gene52238:intron | 30.0% | |
| AGATGTCGTTATGAAATTCT+GGG | - | chr7.4:28755375-28755394 | None:intergenic | 30.0% | |
| CAAAATATGTGCTTAAAGCT+AGG | - | chr7.4:28756141-28756160 | None:intergenic | 30.0% | |
| CAGTGATTTCTACTATATTC+TGG | - | chr7.4:28754306-28754325 | None:intergenic | 30.0% | |
| CATATAGTAAGATGCAGAAT+TGG | - | chr7.4:28752083-28752102 | None:intergenic | 30.0% | |
| CATTAAATCAATGTCAGCAT+GGG | - | chr7.4:28756993-28757012 | None:intergenic | 30.0% | |
| GAAGGCAAAGAACAAAAAAA+AGG | + | chr7.4:28756811-28756830 | MS.gene52238:CDS | 30.0% | |
| GAATATAAAATAACCTGGAC+GGG | - | chr7.4:28756459-28756478 | None:intergenic | 30.0% | |
| GAATCCTAGTTGTATAGTTA+TGG | + | chr7.4:28755877-28755896 | MS.gene52238:intron | 30.0% | |
| GATTCTTACATTGTCAATAG+CGG | + | chr7.4:28753484-28753503 | MS.gene52238:intron | 30.0% | |
| TCTTTATCTGCACTTTCTTA+TGG | + | chr7.4:28754607-28754626 | MS.gene52238:intron | 30.0% | |
| ! | ACTTGGATTTATCTCTGTTT+TGG | + | chr7.4:28754747-28754766 | MS.gene52238:intron | 30.0% |
| ! | GGGGTACAAATAAATTTTGA+TGG | + | chr7.4:28755977-28755996 | MS.gene52238:intron | 30.0% |
| ! | GTTATTTGCAACCAAGTTTT+TGG | + | chr7.4:28755137-28755156 | MS.gene52238:intron | 30.0% |
| ! | TTTTCCTATGAGTTCACAAT+AGG | - | chr7.4:28752686-28752705 | None:intergenic | 30.0% |
| !! | AAACAACAATTGGCTTCTTT+TGG | + | chr7.4:28752466-28752485 | MS.gene52238:CDS | 30.0% |
| !! | CTCCATTTTAAGGGTATATT+AGG | - | chr7.4:28753678-28753697 | None:intergenic | 30.0% |
| !! | GATTGATTTTAGTGTGTCAA+AGG | + | chr7.4:28755429-28755448 | MS.gene52238:intron | 30.0% |
| AAAATGCATCTCTCTCTCTT+TGG | - | chr7.4:28754133-28754152 | None:intergenic | 35.0% | |
| AAACAGGCTCATAGTTAAAC+TGG | - | chr7.4:28752612-28752631 | None:intergenic | 35.0% | |
| AAATACTTAGTCCACCATCT+CGG | - | chr7.4:28756371-28756390 | None:intergenic | 35.0% | |
| AGAGTGAATGAGAAAGCAAA+GGG | - | chr7.4:28753808-28753827 | None:intergenic | 35.0% | |
| AGTTATGGCATGGAAGTTAT+TGG | + | chr7.4:28755892-28755911 | MS.gene52238:intron | 35.0% | |
| ATACACCAATCAGATGATCA+TGG | - | chr7.4:28756058-28756077 | None:intergenic | 35.0% | |
| ATGATCATCTGATTGGTGTA+TGG | + | chr7.4:28756057-28756076 | MS.gene52238:intron | 35.0% | |
| ATTCAGTTAGCATGACATTG+TGG | - | chr7.4:28755861-28755880 | None:intergenic | 35.0% | |
| CAAAAAAAAGGAAAGCTCAG+AGG | + | chr7.4:28756823-28756842 | MS.gene52238:CDS | 35.0% | |
| CAGAAATATCGACAGAAACT+AGG | - | chr7.4:28755067-28755086 | None:intergenic | 35.0% | |
| CAGATGTCGTTATGAAATTC+TGG | - | chr7.4:28755376-28755395 | None:intergenic | 35.0% | |
| CATGCCATAACTATACAACT+AGG | - | chr7.4:28755884-28755903 | None:intergenic | 35.0% | |
| CTAGTTGTATAGTTATGGCA+TGG | + | chr7.4:28755882-28755901 | MS.gene52238:intron | 35.0% | |
| CTCATAGGAAAAGTGGTATA+AGG | + | chr7.4:28752694-28752713 | MS.gene52238:intron | 35.0% | |
| CTGGATTGAAATGGTAGATT+GGG | - | chr7.4:28752181-28752200 | None:intergenic | 35.0% | |
| GCACTTTCTTATGGTTTAAG+TGG | + | chr7.4:28754616-28754635 | MS.gene52238:intron | 35.0% | |
| GCATTAAATCAATGTCAGCA+TGG | - | chr7.4:28756994-28757013 | None:intergenic | 35.0% | |
| TAACAGAAAACAACAGCTTC+TGG | - | chr7.4:28752763-28752782 | None:intergenic | 35.0% | |
| TCAATTAAACCAGTCCAAAC+CGG | - | chr7.4:28753466-28753485 | None:intergenic | 35.0% | |
| TTAAAATGGAGCAGTTGCAA+GGG | + | chr7.4:28753687-28753706 | MS.gene52238:intron | 35.0% | |
| TTACTCATACACACACATGT+GGG | - | chr7.4:28754396-28754415 | None:intergenic | 35.0% | |
| TTGTGAACTCATAGGAAAAG+TGG | + | chr7.4:28752687-28752706 | MS.gene52238:intron | 35.0% | |
| TTTACTCATACACACACATG+TGG | - | chr7.4:28754397-28754416 | None:intergenic | 35.0% | |
| ! | AGAAACACGTGTTTTGCTAA+GGG | + | chr7.4:28753609-28753628 | MS.gene52238:intron | 35.0% |
| ! | CAAAAACAACTGGTTCATAC+CGG | + | chr7.4:28753444-28753463 | MS.gene52238:intron | 35.0% |
| ! | CTTTGTGTTTTGTCATCTTC+TGG | + | chr7.4:28755559-28755578 | MS.gene52238:CDS | 35.0% |
| ! | TTGCAACTGCTCCATTTTAA+GGG | - | chr7.4:28753687-28753706 | None:intergenic | 35.0% |
| ! | TTTAATTGCCACCTTGGTTT+TGG | + | chr7.4:28756271-28756290 | MS.gene52238:intron | 35.0% |
| ! | TTTTTGATGCAATATCCTGC+AGG | - | chr7.4:28755507-28755526 | None:intergenic | 35.0% |
| !! | AACAAAGTAAATTGGTGCCA+TGG | + | chr7.4:28756009-28756028 | MS.gene52238:intron | 35.0% |
| !! | ACAAAACTGGTTTGAAGAAG+AGG | - | chr7.4:28753863-28753882 | None:intergenic | 35.0% |
| !! | CAAAACTGGTTTGAAGAAGA+GGG | - | chr7.4:28753862-28753881 | None:intergenic | 35.0% |
| !! | CTCTTGGTTTTTGCTTCATT+AGG | - | chr7.4:28755281-28755300 | None:intergenic | 35.0% |
| !!! | GTTGGAGTCAGATTTTGATT+TGG | - | chr7.4:28756917-28756936 | None:intergenic | 35.0% |
| !!! | TGAACATTTTTTTCTCCTGC+AGG | + | chr7.4:28755489-28755508 | MS.gene52238:intron | 35.0% |
| AACACTACCGCTAGAATCAT+CGG | + | chr7.4:28752231-28752250 | MS.gene52238:CDS | 40.0% | |
| ATACCACTACCGAATAAACG+AGG | - | chr7.4:28753898-28753917 | None:intergenic | 40.0% | |
| ATGATTGGGAGCTTTCTTTG+GGG | + | chr7.4:28756782-28756801 | MS.gene52238:CDS | 40.0% | |
| ATTCGTGAGCCTTCAATTTC+AGG | + | chr7.4:28755601-28755620 | MS.gene52238:CDS | 40.0% | |
| CACGATTGTAGGTGATGATT+GGG | + | chr7.4:28756768-28756787 | MS.gene52238:intron | 40.0% | |
| CAGAATTGGATAACGCCATA+TGG | - | chr7.4:28752069-28752088 | None:intergenic | 40.0% | |
| CATGTCATCTACATTGCAAG+TGG | + | chr7.4:28754694-28754713 | MS.gene52238:CDS | 40.0% | |
| CTACCATTTCAATCCAGCAT+TGG | + | chr7.4:28752184-28752203 | MS.gene52238:CDS | 40.0% | |
| CTTAAAATGGAGCAGTTGCA+AGG | + | chr7.4:28753686-28753705 | MS.gene52238:intron | 40.0% | |
| CTTGCAATGTAGATGACATG+AGG | - | chr7.4:28754694-28754713 | None:intergenic | 40.0% | |
| GAAATTGCCGATGATTCTAG+CGG | - | chr7.4:28752241-28752260 | None:intergenic | 40.0% | |
| GAGAGTGAATGAGAAAGCAA+AGG | - | chr7.4:28753809-28753828 | None:intergenic | 40.0% | |
| GAGTGGGAAGAAACAACAAT+TGG | + | chr7.4:28752456-28752475 | MS.gene52238:CDS | 40.0% | |
| GATGATTGGGAGCTTTCTTT+GGG | + | chr7.4:28756781-28756800 | MS.gene52238:CDS | 40.0% | |
| GCTGGATTGAAATGGTAGAT+TGG | - | chr7.4:28752182-28752201 | None:intergenic | 40.0% | |
| GCTGTTGAATCAGATCATCA+AGG | + | chr7.4:28756857-28756876 | MS.gene52238:CDS | 40.0% | |
| GGACTAAGTATTTCCCTTCT+TGG | + | chr7.4:28756378-28756397 | MS.gene52238:CDS | 40.0% | |
| GGTGCAGTAACTAATGATTC+AGG | - | chr7.4:28754285-28754304 | None:intergenic | 40.0% | |
| TAACAAAGCCAAAACCAAGG+TGG | - | chr7.4:28756282-28756301 | None:intergenic | 40.0% | |
| TACATTGTCAATAGCGGTCT+GGG | + | chr7.4:28753490-28753509 | MS.gene52238:intron | 40.0% | |
| TCACGATTGTAGGTGATGAT+TGG | + | chr7.4:28756767-28756786 | MS.gene52238:intron | 40.0% | |
| TCATCGGCAATTTCATCTCA+AGG | + | chr7.4:28752247-28752266 | MS.gene52238:CDS | 40.0% | |
| TGATGATTGGGAGCTTTCTT+TGG | + | chr7.4:28756780-28756799 | MS.gene52238:CDS | 40.0% | |
| TGTGCATAAACGTGGCATAT+AGG | - | chr7.4:28755694-28755713 | None:intergenic | 40.0% | |
| TGTTACGTGCCTACTGAAAA+TGG | + | chr7.4:28756333-28756352 | MS.gene52238:CDS | 40.0% | |
| TTACATTGTCAATAGCGGTC+TGG | + | chr7.4:28753489-28753508 | MS.gene52238:intron | 40.0% | |
| TTTCCGATAATGAGCATGTC+AGG | + | chr7.4:28756309-28756328 | MS.gene52238:CDS | 40.0% | |
| ! | AAACACGTGTTTTGCTAAGG+GGG | + | chr7.4:28753611-28753630 | MS.gene52238:intron | 40.0% |
| ! | CTTGCAACTGCTCCATTTTA+AGG | - | chr7.4:28753688-28753707 | None:intergenic | 40.0% |
| ! | GAAACACGTGTTTTGCTAAG+GGG | + | chr7.4:28753610-28753629 | MS.gene52238:intron | 40.0% |
| ! | GAGAAACACGTGTTTTGCTA+AGG | + | chr7.4:28753608-28753627 | MS.gene52238:intron | 40.0% |
| ! | TTACTAGATGGTGTTGGACT+TGG | - | chr7.4:28752382-28752401 | None:intergenic | 40.0% |
| !! | AAAGGGGTCATAAAAGTGCT+CGG | + | chr7.4:28755349-28755368 | MS.gene52238:intron | 40.0% |
| !! | ACAATTACGGAAAGGCATCA+AGG | - | chr7.4:28754234-28754253 | None:intergenic | 40.0% |
| !! | ATTTCCCTTCTTGGTTCTGA+TGG | + | chr7.4:28756387-28756406 | MS.gene52238:CDS | 40.0% |
| !! | CTTTCTTTGGGGTAGATTGA+AGG | + | chr7.4:28756793-28756812 | MS.gene52238:CDS | 40.0% |
| !! | GCTCTAAGAAGCCAAAAACT+TGG | - | chr7.4:28755151-28755170 | None:intergenic | 40.0% |
| !! | GCTGACATTGATTTAATGCG+TGG | + | chr7.4:28756995-28757014 | MS.gene52238:CDS | 40.0% |
| !!! | ACCTTGGTTTTGGCTTTGTT+AGG | + | chr7.4:28756281-28756300 | MS.gene52238:intron | 40.0% |
| !!! | AGCAGTTGCAAGGGTATTTT+TGG | + | chr7.4:28753696-28753715 | MS.gene52238:intron | 40.0% |
| !!! | CAGTTGCAAGGGTATTTTTG+GGG | + | chr7.4:28753698-28753717 | MS.gene52238:intron | 40.0% |
| !!! | CCTTGGTTTTGGCTTTGTTA+GGG | + | chr7.4:28756282-28756301 | MS.gene52238:intron | 40.0% |
| !!! | GCAGTTGCAAGGGTATTTTT+GGG | + | chr7.4:28753697-28753716 | MS.gene52238:intron | 40.0% |
| !!! | GTTTTTGGCTTCTTAGAGCA+AGG | + | chr7.4:28755152-28755171 | MS.gene52238:intron | 40.0% |
| !!! | TTTTCAGGTGAGTTGATGTC+TGG | + | chr7.4:28754646-28754665 | MS.gene52238:intron | 40.0% |
| ACGGTTCCAGGATTACTAGA+TGG | - | chr7.4:28752394-28752413 | None:intergenic | 45.0% | |
| AGGTGGCACTCTCAAATATG+AGG | + | chr7.4:28755621-28755640 | MS.gene52238:CDS | 45.0% | |
| ATGCCACGTTTATGCACACA+CGG | + | chr7.4:28755696-28755715 | MS.gene52238:intron | 45.0% | |
| ATGCCTCGTTTATTCGGTAG+TGG | + | chr7.4:28753892-28753911 | MS.gene52238:intron | 45.0% | |
| CAACCTCATCCTTAAGTCCT+TGG | + | chr7.4:28756933-28756952 | MS.gene52238:CDS | 45.0% | |
| CAAGGACTTAAGGATGAGGT+TGG | - | chr7.4:28756935-28756954 | None:intergenic | 45.0% | |
| CAGACGAGAAGGGGATATTA+GGG | - | chr7.4:28753742-28753761 | None:intergenic | 45.0% | |
| CAGCCTGACATGCTCATTAT+CGG | - | chr7.4:28756315-28756334 | None:intergenic | 45.0% | |
| CCAAACAGACTGTATGTGTG+TGG | + | chr7.4:28754366-28754385 | MS.gene52238:intron | 45.0% | |
| CCAACACCATCTAGTAATCC+TGG | + | chr7.4:28752385-28752404 | MS.gene52238:CDS | 45.0% | |
| CCACACACATACAGTCTGTT+TGG | - | chr7.4:28754369-28754388 | None:intergenic | 45.0% | |
| CCACCAATGCTGGATTGAAA+TGG | - | chr7.4:28752190-28752209 | None:intergenic | 45.0% | |
| CCAGGATTACTAGATGGTGT+TGG | - | chr7.4:28752388-28752407 | None:intergenic | 45.0% | |
| CCCTAACAAAGCCAAAACCA+AGG | - | chr7.4:28756285-28756304 | None:intergenic | 45.0% | |
| CCGAAGATGCCTCGTTTATT+CGG | + | chr7.4:28753886-28753905 | MS.gene52238:intron | 45.0% | |
| CTAATATCCCCTTCTCGTCT+GGG | + | chr7.4:28753741-28753760 | MS.gene52238:intron | 45.0% | |
| CTACTGAAAATGGCTCCTCA+CGG | + | chr7.4:28756343-28756362 | MS.gene52238:CDS | 45.0% | |
| CTGTGAAAAGGAAGAGAGGA+AGG | + | chr7.4:28752311-28752330 | MS.gene52238:CDS | 45.0% | |
| GAAATGCTATTCAGTGCAGC+TGG | - | chr7.4:28756893-28756912 | None:intergenic | 45.0% | |
| GAGACTGTGAAAAGGAAGAG+AGG | + | chr7.4:28752307-28752326 | MS.gene52238:CDS | 45.0% | |
| GGGTCCTATTGTGAACTCAT+AGG | + | chr7.4:28752679-28752698 | MS.gene52238:intron | 45.0% | |
| GTCATACTGTTGTTCCGTCT+GGG | + | chr7.4:28752284-28752303 | MS.gene52238:CDS | 45.0% | |
| TAAAATAACCTGGACGGGAC+TGG | - | chr7.4:28756454-28756473 | None:intergenic | 45.0% | |
| TAATATCCCCTTCTCGTCTG+GGG | + | chr7.4:28753742-28753761 | MS.gene52238:intron | 45.0% | |
| TCATACTGTTGTTCCGTCTG+GGG | + | chr7.4:28752285-28752304 | MS.gene52238:CDS | 45.0% | |
| TGACCAAGGACTTAAGGATG+AGG | - | chr7.4:28756939-28756958 | None:intergenic | 45.0% | |
| TTTCCGTGTGTGCATAAACG+TGG | - | chr7.4:28755702-28755721 | None:intergenic | 45.0% | |
| ! | ACAACTGGTTCATACCGGTT+TGG | + | chr7.4:28753449-28753468 | MS.gene52238:intron | 45.0% |
| ! | AGAGTGCCACCTGAAATTGA+AGG | - | chr7.4:28755613-28755632 | None:intergenic | 45.0% |
| ! | AGTTGATGTCTGGTTCAGCT+GGG | + | chr7.4:28754656-28754675 | MS.gene52238:CDS | 45.0% |
| ! | CCATTTCAATCCAGCATTGG+TGG | + | chr7.4:28752187-28752206 | MS.gene52238:CDS | 45.0% |
| ! | CCGAATAAACGAGGCATCTT+CGG | - | chr7.4:28753889-28753908 | None:intergenic | 45.0% |
| ! | TCTCAAGGTGTCAATGTGAG+TGG | + | chr7.4:28752262-28752281 | MS.gene52238:CDS | 45.0% |
| ! | TTGACATTTTCTCAGGTGCG+AGG | + | chr7.4:28755529-28755548 | MS.gene52238:CDS | 45.0% |
| !! | TTTCAATCCAGCATTGGTGG+TGG | + | chr7.4:28752190-28752209 | MS.gene52238:CDS | 45.0% |
| !!! | TTTTATTTTGAAAATAATTA+GGG | + | chr7.4:28752659-28752678 | MS.gene52238:intron | 5.0% |
| !!! | TTTTTATTTTGAAAATAATT+AGG | + | chr7.4:28752658-28752677 | MS.gene52238:intron | 5.0% |
| ACAGACTGTATGTGTGTGGC+AGG | + | chr7.4:28754370-28754389 | MS.gene52238:intron | 50.0% | |
| AGAGGAAGGCCGAGGAAATA+TGG | + | chr7.4:28752325-28752344 | MS.gene52238:CDS | 50.0% | |
| AGAGTGACGAGAAGAGAGAG+CGG | - | chr7.4:28753785-28753804 | None:intergenic | 50.0% | |
| AGCATCGCGTCAGATGGATA+TGG | + | chr7.4:28756961-28756980 | MS.gene52238:CDS | 50.0% | |
| ATTGTCAATAGCGGTCTGGG+CGG | + | chr7.4:28753493-28753512 | MS.gene52238:intron | 50.0% | |
| CCAGACGAGAAGGGGATATT+AGG | - | chr7.4:28753743-28753762 | None:intergenic | 50.0% | |
| CCTAATATCCCCTTCTCGTC+TGG | + | chr7.4:28753740-28753759 | MS.gene52238:intron | 50.0% | |
| CGCTGACAGAGTTGTGTCAT+TGG | + | chr7.4:28752348-28752367 | MS.gene52238:CDS | 50.0% | |
| CGTGAGCCTTCAATTTCAGG+TGG | + | chr7.4:28755604-28755623 | MS.gene52238:CDS | 50.0% | |
| CTCGGCGAAACATGTAACTC+AGG | - | chr7.4:28752139-28752158 | None:intergenic | 50.0% | |
| CTGTCAGCGCCATATTTCCT+CGG | - | chr7.4:28752337-28752356 | None:intergenic | 50.0% | |
| GAAAGCTCAGAGGATGCAGA+AGG | + | chr7.4:28756833-28756852 | MS.gene52238:CDS | 50.0% | |
| GCATCGCGTCAGATGGATAT+GGG | + | chr7.4:28756962-28756981 | MS.gene52238:CDS | 50.0% | |
| GGTCATACTGTTGTTCCGTC+TGG | + | chr7.4:28752283-28752302 | MS.gene52238:CDS | 50.0% | |
| GGTGGTGTAGAATAGAGGTG+TGG | + | chr7.4:28753571-28753590 | MS.gene52238:intron | 50.0% | |
| TGCTGCTGACCAAGGACTTA+AGG | - | chr7.4:28756945-28756964 | None:intergenic | 50.0% | |
| ! | CTTTTCACAGTCTCCCCAGA+CGG | - | chr7.4:28752301-28752320 | None:intergenic | 50.0% |
| ! | GCATCTTCGGTGCACAAAAC+TGG | - | chr7.4:28753876-28753895 | None:intergenic | 50.0% |
| ! | TTGTTTCTTCCCACTCCCAG+GGG | - | chr7.4:28752452-28752471 | None:intergenic | 50.0% |
| !! | ACTGGTTTGAAGAAGAGGGC+CGG | - | chr7.4:28753858-28753877 | None:intergenic | 50.0% |
| !! | ATGCAGCAGAGAGTACTACC+TGG | + | chr7.4:28752100-28752119 | MS.gene52238:CDS | 50.0% |
| !! | CAGAGAGTACTACCTGGTTC+TGG | + | chr7.4:28752106-28752125 | MS.gene52238:CDS | 50.0% |
| !! | CGTGAGGAGCCATTTTCAGT+AGG | - | chr7.4:28756345-28756364 | None:intergenic | 50.0% |
| !! | GAGTTGATGTCTGGTTCAGC+TGG | + | chr7.4:28754655-28754674 | MS.gene52238:CDS | 50.0% |
| !! | GGTGGTGGTGGTAGTAACAT+TGG | + | chr7.4:28752205-28752224 | MS.gene52238:CDS | 50.0% |
| !! | GTTGTTTCTTCCCACTCCCA+GGG | - | chr7.4:28752453-28752472 | None:intergenic | 50.0% |
| !! | TGGTTCATACCGGTTTGGAC+TGG | + | chr7.4:28753454-28753473 | MS.gene52238:intron | 50.0% |
| !! | TGTTGTTTCTTCCCACTCCC+AGG | - | chr7.4:28752454-28752473 | None:intergenic | 50.0% |
| AAAGGAAGAGAGGAAGGCCG+AGG | + | chr7.4:28752317-28752336 | MS.gene52238:CDS | 55.0% | |
| AATCCTGGAACCGTGACGCA+AGG | + | chr7.4:28752400-28752419 | MS.gene52238:CDS | 55.0% | |
| ACTACCACCACCACCAATGC+TGG | - | chr7.4:28752200-28752219 | None:intergenic | 55.0% | |
| CAACTGCTCCACCAAAGACG+CGG | - | chr7.4:28756413-28756432 | None:intergenic | 55.0% | |
| CGTCTGGGGAGACTGTGAAA+AGG | + | chr7.4:28752299-28752318 | MS.gene52238:CDS | 55.0% | |
| CTGGGCGGTGTGATAGAGTT+GGG | + | chr7.4:28753508-28753527 | MS.gene52238:intron | 55.0% | |
| GAGCGGGCGTATATGTTCTG+TGG | - | chr7.4:28753768-28753787 | None:intergenic | 55.0% | |
| GAGTGACGAGAAGAGAGAGC+GGG | - | chr7.4:28753784-28753803 | None:intergenic | 55.0% | |
| GCGGCCATCAGAACCAAGAA+GGG | - | chr7.4:28756394-28756413 | None:intergenic | 55.0% | |
| GGCGAGGTGGTGTAGAATAG+AGG | + | chr7.4:28753566-28753585 | MS.gene52238:intron | 55.0% | |
| GTCTTTGGTGGAGCAGTTGG+TGG | + | chr7.4:28756414-28756433 | MS.gene52238:CDS | 55.0% | |
| GTGATAGAGTTGGGGCGGTT+GGG | + | chr7.4:28753517-28753536 | MS.gene52238:intron | 55.0% | |
| GTGTTTCTCGTGCACGAACG+TGG | - | chr7.4:28753597-28753616 | None:intergenic | 55.0% | |
| TCTGGGCGGTGTGATAGAGT+TGG | + | chr7.4:28753507-28753526 | MS.gene52238:intron | 55.0% | |
| TGGGCGGTGTGATAGAGTTG+GGG | + | chr7.4:28753509-28753528 | MS.gene52238:intron | 55.0% | |
| TGGTTTGAAGAAGAGGGCCG+GGG | - | chr7.4:28753856-28753875 | None:intergenic | 55.0% | |
| TGTGATAGAGTTGGGGCGGT+TGG | + | chr7.4:28753516-28753535 | MS.gene52238:intron | 55.0% | |
| TGTTTCTTCCCACTCCCAGG+GGG | - | chr7.4:28752451-28752470 | None:intergenic | 55.0% | |
| ! | ATGTCTGGTTCAGCTGGGAC+GGG | + | chr7.4:28754661-28754680 | MS.gene52238:CDS | 55.0% |
| ! | CTGGTTTGAAGAAGAGGGCC+GGG | - | chr7.4:28753857-28753876 | None:intergenic | 55.0% |
| ! | GATGTCTGGTTCAGCTGGGA+CGG | + | chr7.4:28754660-28754679 | MS.gene52238:CDS | 55.0% |
| ! | TCAGGTTGTGCTCCAGAACC+AGG | - | chr7.4:28752121-28752140 | None:intergenic | 55.0% |
| !! | CAATCCAGCATTGGTGGTGG+TGG | + | chr7.4:28752193-28752212 | MS.gene52238:CDS | 55.0% |
| CGCGGCCATCAGAACCAAGA+AGG | - | chr7.4:28756395-28756414 | None:intergenic | 60.0% | |
| CGCGTCTTTGGTGGAGCAGT+TGG | + | chr7.4:28756411-28756430 | MS.gene52238:CDS | 60.0% | |
| GCGGTGTGATAGAGTTGGGG+CGG | + | chr7.4:28753512-28753531 | MS.gene52238:intron | 60.0% | |
| GTCAGCAGCATCGCGTCAGA+TGG | + | chr7.4:28756955-28756974 | MS.gene52238:CDS | 60.0% | |
| GTTGGGGCGGTTGGGATCAA+TGG | + | chr7.4:28753525-28753544 | MS.gene52238:intron | 60.0% | |
| TACACCACCTCGCCACGTGT+GGG | - | chr7.4:28753560-28753579 | None:intergenic | 60.0% | |
| TCCACCATCTCGGTTCCGTG+AGG | - | chr7.4:28756361-28756380 | None:intergenic | 60.0% | |
| TCCTCACGGAACCGAGATGG+TGG | + | chr7.4:28756357-28756376 | MS.gene52238:CDS | 60.0% | |
| TCTGATGGCCGCGTCTTTGG+TGG | + | chr7.4:28756402-28756421 | MS.gene52238:CDS | 60.0% | |
| TCTGTGGCCCCAGACGAGAA+GGG | - | chr7.4:28753752-28753771 | None:intergenic | 60.0% | |
| TGACGCGATGCTGCTGACCA+AGG | - | chr7.4:28756953-28756972 | None:intergenic | 60.0% | |
| TTCTGTGGCCCCAGACGAGA+AGG | - | chr7.4:28753753-28753772 | None:intergenic | 60.0% | |
| TTTCGGACCGCCTTGCGTCA+CGG | - | chr7.4:28752413-28752432 | None:intergenic | 60.0% | |
| ! | ACGGGACTGGCAGCAACAAG+CGG | - | chr7.4:28756441-28756460 | None:intergenic | 60.0% |
| ! | GGTTCTGATGGCCGCGTCTT+TGG | + | chr7.4:28756399-28756418 | MS.gene52238:CDS | 60.0% |
| ACGCAAGGCGGTCCGAAACG+AGG | + | chr7.4:28752415-28752434 | MS.gene52238:CDS | 65.0% | |
| CCTGGAACCGTGACGCAAGG+CGG | + | chr7.4:28752403-28752422 | MS.gene52238:CDS | 65.0% | |
| CGCAAGGCGGTCCGAAACGA+GGG | + | chr7.4:28752416-28752435 | MS.gene52238:CDS | 65.0% | |
| CTACACCACCTCGCCACGTG+TGG | - | chr7.4:28753561-28753580 | None:intergenic | 65.0% | |
| CTGTGGCCCCAGACGAGAAG+GGG | - | chr7.4:28753751-28753770 | None:intergenic | 65.0% | |
| GCGGTCCGAAACGAGGGAGA+GGG | + | chr7.4:28752422-28752441 | MS.gene52238:CDS | 65.0% | |
| GGACGCCCTCTCCCTCGTTT+CGG | - | chr7.4:28752430-28752449 | None:intergenic | 65.0% | |
| GGCTCCTCACGGAACCGAGA+TGG | + | chr7.4:28756354-28756373 | MS.gene52238:CDS | 65.0% | |
| TGTTGCTGCCAGTCCCGTCC+AGG | + | chr7.4:28756443-28756462 | MS.gene52238:CDS | 65.0% | |
| !! | ACGGCTGGTTCGCAGCAGAG+GGG | - | chr7.4:28753831-28753850 | None:intergenic | 65.0% |
| !! | CACGGCTGGTTCGCAGCAGA+GGG | - | chr7.4:28753832-28753851 | None:intergenic | 65.0% |
| !! | TGGCTAGCCTCACCCACACG+TGG | + | chr7.4:28753545-28753564 | MS.gene52238:intron | 65.0% |
| AGCCTCACCCACACGTGGCG+AGG | + | chr7.4:28753550-28753569 | MS.gene52238:intron | 70.0% | |
| CACCTCGCCACGTGTGGGTG+AGG | - | chr7.4:28753555-28753574 | None:intergenic | 70.0% | |
| CCGCCTTGCGTCACGGTTCC+AGG | - | chr7.4:28752406-28752425 | None:intergenic | 70.0% | |
| CCTCTGCTGCGAACCAGCCG+TGG | + | chr7.4:28753830-28753849 | MS.gene52238:intron | 70.0% | |
| CTCACCCACACGTGGCGAGG+TGG | + | chr7.4:28753553-28753572 | MS.gene52238:intron | 70.0% | |
| GAAGAAGAGGGCCGGGGCCA+CGG | - | chr7.4:28753850-28753869 | None:intergenic | 70.0% | |
| GGCGGTCCGAAACGAGGGAG+AGG | + | chr7.4:28752421-28752440 | MS.gene52238:CDS | 70.0% | |
| !! | CCACGGCTGGTTCGCAGCAG+AGG | - | chr7.4:28753833-28753852 | None:intergenic | 70.0% |
| CTGCGAACCAGCCGTGGCCC+CGG | + | chr7.4:28753836-28753855 | MS.gene52238:intron | 75.0% | |
| !! | AGAGGGCGTCCCCCTGGGAG+TGG | + | chr7.4:28752439-28752458 | MS.gene52238:CDS | 75.0% |
| !! | GAGGGAGAGGGCGTCCCCCT+GGG | + | chr7.4:28752434-28752453 | MS.gene52238:CDS | 75.0% |
| !! | GAGGGCGTCCCCCTGGGAGT+GGG | + | chr7.4:28752440-28752459 | MS.gene52238:CDS | 75.0% |
| ! | AAGAGGGCCGGGGCCACGGC+TGG | - | chr7.4:28753846-28753865 | None:intergenic | 80.0% |
| !!! | CGAGGGAGAGGGCGTCCCCC+TGG | + | chr7.4:28752433-28752452 | MS.gene52238:CDS | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.4 | gene | 28752052 | 28757021 | 28752052 | ID=MS.gene52238 |
| chr7.4 | mRNA | 28752052 | 28757021 | 28752052 | ID=MS.gene52238.t1;Parent=MS.gene52238 |
| chr7.4 | exon | 28752052 | 28752487 | 28752052 | ID=MS.gene52238.t1.exon1;Parent=MS.gene52238.t1 |
| chr7.4 | CDS | 28752052 | 28752487 | 28752052 | ID=cds.MS.gene52238.t1;Parent=MS.gene52238.t1 |
| chr7.4 | exon | 28754653 | 28754720 | 28754653 | ID=MS.gene52238.t1.exon2;Parent=MS.gene52238.t1 |
| chr7.4 | CDS | 28754653 | 28754720 | 28754653 | ID=cds.MS.gene52238.t1;Parent=MS.gene52238.t1 |
| chr7.4 | exon | 28755511 | 28755642 | 28755511 | ID=MS.gene52238.t1.exon3;Parent=MS.gene52238.t1 |
| chr7.4 | CDS | 28755511 | 28755642 | 28755511 | ID=cds.MS.gene52238.t1;Parent=MS.gene52238.t1 |
| chr7.4 | exon | 28756303 | 28756464 | 28756303 | ID=MS.gene52238.t1.exon4;Parent=MS.gene52238.t1 |
| chr7.4 | CDS | 28756303 | 28756464 | 28756303 | ID=cds.MS.gene52238.t1;Parent=MS.gene52238.t1 |
| chr7.4 | exon | 28756779 | 28757021 | 28756779 | ID=MS.gene52238.t1.exon5;Parent=MS.gene52238.t1 |
| chr7.4 | CDS | 28756779 | 28757021 | 28756779 | ID=cds.MS.gene52238.t1;Parent=MS.gene52238.t1 |
| Gene Sequence |
| Protein sequence |
