Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene064647.t1 | XP_003600284.2 | 90.6 | 886 | 81 | 2 | 1 | 886 | 9 | 892 | 0.00E+00 | 1575.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene064647.t1 | Q39214 | 27.1 | 904 | 617 | 20 | 2 | 879 | 23 | 910 | 9.0e-82 | 306.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene064647.t1 | A0A396INJ6 | 90.6 | 886 | 81 | 2 | 1 | 886 | 9 | 892 | 0.0e+00 | 1575.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049171 | MS.gene064647 | -0.854142 | 1.50E-61 | -1.69E-46 |
| MS.gene049222 | MS.gene064647 | -0.822511 | 2.28E-53 | -1.69E-46 |
| MS.gene049259 | MS.gene064647 | 0.801217 | 9.99E-49 | -1.69E-46 |
| MS.gene049281 | MS.gene064647 | 0.815509 | 8.91E-52 | -1.69E-46 |
| MS.gene049285 | MS.gene064647 | -0.809236 | 2.09E-50 | -1.69E-46 |
| MS.gene049320 | MS.gene064647 | -0.82394 | 1.06E-53 | -1.69E-46 |
| MS.gene049633 | MS.gene064647 | -0.831078 | 2.05E-55 | -1.69E-46 |
| MS.gene050163 | MS.gene064647 | -0.807485 | 4.94E-50 | -1.69E-46 |
| MS.gene050165 | MS.gene064647 | -0.82298 | 1.77E-53 | -1.69E-46 |
| MS.gene050170 | MS.gene064647 | -0.822733 | 2.02E-53 | -1.69E-46 |
| MS.gene050323 | MS.gene064647 | -0.812929 | 3.31E-51 | -1.69E-46 |
| MS.gene050333 | MS.gene064647 | -0.820615 | 6.25E-53 | -1.69E-46 |
| MS.gene050338 | MS.gene064647 | 0.803607 | 3.22E-49 | -1.69E-46 |
| MS.gene050381 | MS.gene064647 | 0.804109 | 2.53E-49 | -1.69E-46 |
| MS.gene050496 | MS.gene064647 | -0.835346 | 1.77E-56 | -1.69E-46 |
| MS.gene050504 | MS.gene064647 | -0.842741 | 2.15E-58 | -1.69E-46 |
| MS.gene050577 | MS.gene064647 | -0.817594 | 3.04E-52 | -1.69E-46 |
| MS.gene050612 | MS.gene064647 | -0.84346 | 1.38E-58 | -1.69E-46 |
| MS.gene050647 | MS.gene064647 | 0.81487 | 1.24E-51 | -1.69E-46 |
| MS.gene050675 | MS.gene064647 | -0.822826 | 1.92E-53 | -1.69E-46 |
| MS.gene050699 | MS.gene064647 | -0.821178 | 4.63E-53 | -1.69E-46 |
| MS.gene050772 | MS.gene064647 | -0.819839 | 9.41E-53 | -1.69E-46 |
| MS.gene05080 | MS.gene064647 | -0.805354 | 1.39E-49 | -1.69E-46 |
| MS.gene050868 | MS.gene064647 | -0.81313 | 2.99E-51 | -1.69E-46 |
| MS.gene050871 | MS.gene064647 | -0.809036 | 2.31E-50 | -1.69E-46 |
| MS.gene050904 | MS.gene064647 | -0.801672 | 8.06E-49 | -1.69E-46 |
| MS.gene050986 | MS.gene064647 | -0.800966 | 1.12E-48 | -1.69E-46 |
| MS.gene051044 | MS.gene064647 | 0.851894 | 6.59E-61 | -1.69E-46 |
| MS.gene05104 | MS.gene064647 | 0.808886 | 2.48E-50 | -1.69E-46 |
| MS.gene051127 | MS.gene064647 | 0.821062 | 4.93E-53 | -1.69E-46 |
| MS.gene051138 | MS.gene064647 | 0.822575 | 2.20E-53 | -1.69E-46 |
| MS.gene051364 | MS.gene064647 | 0.84932 | 3.49E-60 | -1.69E-46 |
| MS.gene051366 | MS.gene064647 | 0.850316 | 1.84E-60 | -1.69E-46 |
| MS.gene051367 | MS.gene064647 | 0.819489 | 1.13E-52 | -1.69E-46 |
| MS.gene051422 | MS.gene064647 | 0.843954 | 1.02E-58 | -1.69E-46 |
| MS.gene051651 | MS.gene064647 | 0.850922 | 1.24E-60 | -1.69E-46 |
| MS.gene052164 | MS.gene064647 | -0.800823 | 1.20E-48 | -1.69E-46 |
| MS.gene05240 | MS.gene064647 | 0.820086 | 8.26E-53 | -1.69E-46 |
| MS.gene052486 | MS.gene064647 | -0.801655 | 8.13E-49 | -1.69E-46 |
| MS.gene052916 | MS.gene064647 | -0.804018 | 2.64E-49 | -1.69E-46 |
| MS.gene053203 | MS.gene064647 | -0.806299 | 8.80E-50 | -1.69E-46 |
| MS.gene053420 | MS.gene064647 | 0.852752 | 3.76E-61 | -1.69E-46 |
| MS.gene053824 | MS.gene064647 | -0.813206 | 2.88E-51 | -1.69E-46 |
| MS.gene054056 | MS.gene064647 | 0.805258 | 1.46E-49 | -1.69E-46 |
| MS.gene054642 | MS.gene064647 | -0.822654 | 2.11E-53 | -1.69E-46 |
| MS.gene054706 | MS.gene064647 | 0.801208 | 1.00E-48 | -1.69E-46 |
| MS.gene054707 | MS.gene064647 | 0.807488 | 4.93E-50 | -1.69E-46 |
| MS.gene05470 | MS.gene064647 | -0.825982 | 3.48E-54 | -1.69E-46 |
| MS.gene05483 | MS.gene064647 | 0.809227 | 2.10E-50 | -1.69E-46 |
| MS.gene054954 | MS.gene064647 | -0.815495 | 8.98E-52 | -1.69E-46 |
| MS.gene054959 | MS.gene064647 | 0.822719 | 2.04E-53 | -1.69E-46 |
| MS.gene055154 | MS.gene064647 | 0.826733 | 2.31E-54 | -1.69E-46 |
| MS.gene055362 | MS.gene064647 | -0.829709 | 4.42E-55 | -1.69E-46 |
| MS.gene055502 | MS.gene064647 | -0.839561 | 1.47E-57 | -1.69E-46 |
| MS.gene055577 | MS.gene064647 | -0.833182 | 6.18E-56 | -1.69E-46 |
| MS.gene055748 | MS.gene064647 | -0.814098 | 1.83E-51 | -1.69E-46 |
| MS.gene055750 | MS.gene064647 | -0.820551 | 6.46E-53 | -1.69E-46 |
| MS.gene055751 | MS.gene064647 | -0.826801 | 2.22E-54 | -1.69E-46 |
| MS.gene05589 | MS.gene064647 | -0.850259 | 1.91E-60 | -1.69E-46 |
| MS.gene055942 | MS.gene064647 | 0.850011 | 2.24E-60 | -1.69E-46 |
| MS.gene056224 | MS.gene064647 | 0.813256 | 2.81E-51 | -1.69E-46 |
| MS.gene056354 | MS.gene064647 | 0.818409 | 1.99E-52 | -1.69E-46 |
| MS.gene056504 | MS.gene064647 | -0.851268 | 9.91E-61 | -1.69E-46 |
| MS.gene056590 | MS.gene064647 | 0.803197 | 3.91E-49 | -1.69E-46 |
| MS.gene056591 | MS.gene064647 | 0.803364 | 3.61E-49 | -1.69E-46 |
| MS.gene056657 | MS.gene064647 | -0.807825 | 4.18E-50 | -1.69E-46 |
| MS.gene056692 | MS.gene064647 | -0.819906 | 9.08E-53 | -1.69E-46 |
| MS.gene056748 | MS.gene064647 | 0.800966 | 1.12E-48 | -1.69E-46 |
| MS.gene056856 | MS.gene064647 | 0.834185 | 3.47E-56 | -1.69E-46 |
| MS.gene056857 | MS.gene064647 | 0.800991 | 1.11E-48 | -1.69E-46 |
| MS.gene057606 | MS.gene064647 | 0.812231 | 4.70E-51 | -1.69E-46 |
| MS.gene057768 | MS.gene064647 | 0.81728 | 3.58E-52 | -1.69E-46 |
| MS.gene058068 | MS.gene064647 | 0.823498 | 1.34E-53 | -1.69E-46 |
| MS.gene058099 | MS.gene064647 | 0.803173 | 3.96E-49 | -1.69E-46 |
| MS.gene058111 | MS.gene064647 | 0.81705 | 4.03E-52 | -1.69E-46 |
| MS.gene058117 | MS.gene064647 | 0.8214 | 4.12E-53 | -1.69E-46 |
| MS.gene058171 | MS.gene064647 | 0.81353 | 2.44E-51 | -1.69E-46 |
| MS.gene058175 | MS.gene064647 | 0.816011 | 6.89E-52 | -1.69E-46 |
| MS.gene058268 | MS.gene064647 | 0.815915 | 7.24E-52 | -1.69E-46 |
| MS.gene058334 | MS.gene064647 | 0.830009 | 3.74E-55 | -1.69E-46 |
| MS.gene05837 | MS.gene064647 | -0.819962 | 8.82E-53 | -1.69E-46 |
| MS.gene058382 | MS.gene064647 | 0.820657 | 6.11E-53 | -1.69E-46 |
| MS.gene058419 | MS.gene064647 | -0.834526 | 2.85E-56 | -1.69E-46 |
| MS.gene058544 | MS.gene064647 | -0.808589 | 2.88E-50 | -1.69E-46 |
| MS.gene058603 | MS.gene064647 | 0.818892 | 1.55E-52 | -1.69E-46 |
| MS.gene058838 | MS.gene064647 | -0.818245 | 2.17E-52 | -1.69E-46 |
| MS.gene059022 | MS.gene064647 | -0.840018 | 1.12E-57 | -1.69E-46 |
| MS.gene059023 | MS.gene064647 | -0.833543 | 5.02E-56 | -1.69E-46 |
| MS.gene059677 | MS.gene064647 | -0.830591 | 2.69E-55 | -1.69E-46 |
| MS.gene059718 | MS.gene064647 | -0.805164 | 1.52E-49 | -1.69E-46 |
| MS.gene059865 | MS.gene064647 | -0.847636 | 1.02E-59 | -1.69E-46 |
| MS.gene059953 | MS.gene064647 | 0.841607 | 4.29E-58 | -1.69E-46 |
| MS.gene059955 | MS.gene064647 | 0.810592 | 1.07E-50 | -1.69E-46 |
| MS.gene060405 | MS.gene064647 | 0.808045 | 3.76E-50 | -1.69E-46 |
| MS.gene060593 | MS.gene064647 | 0.801022 | 1.10E-48 | -1.69E-46 |
| MS.gene060595 | MS.gene064647 | 0.823878 | 1.09E-53 | -1.69E-46 |
| MS.gene060703 | MS.gene064647 | -0.82367 | 1.22E-53 | -1.69E-46 |
| MS.gene060762 | MS.gene064647 | -0.836264 | 1.04E-56 | -1.69E-46 |
| MS.gene060778 | MS.gene064647 | -0.803819 | 2.91E-49 | -1.69E-46 |
| MS.gene06077 | MS.gene064647 | -0.838896 | 2.19E-57 | -1.69E-46 |
| MS.gene060823 | MS.gene064647 | 0.830147 | 3.46E-55 | -1.69E-46 |
| MS.gene060982 | MS.gene064647 | -0.849989 | 2.27E-60 | -1.69E-46 |
| MS.gene061044 | MS.gene064647 | 0.836436 | 9.37E-57 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 133 sgRNAs with CRISPR-Local
Find 167 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATCATTCATATCACTAATT+TGG | 0.065385 | 3.1:+42551627 | None:intergenic |
| CTTGATGTTCCTCAAGATTT+TGG | 0.124672 | 3.1:-42550231 | MS.gene064647:CDS |
| ATGTATGGAATTTACAATTT+TGG | 0.135586 | 3.1:-42551136 | MS.gene064647:CDS |
| AAGTCATGTTTGTTGTATTT+TGG | 0.177151 | 3.1:-42550708 | MS.gene064647:CDS |
| TGCCATGATTGATAATAAAA+AGG | 0.190217 | 3.1:-42551099 | MS.gene064647:CDS |
| TTCATGTCTGAAATTTCTTT+TGG | 0.210555 | 3.1:+42551896 | None:intergenic |
| TGGGACACCCCTAATCATTT+TGG | 0.250163 | 3.1:+42551916 | None:intergenic |
| GCAACTATATCTTGAAGATT+TGG | 0.260052 | 3.1:-42549521 | MS.gene064647:CDS |
| CTACGTGATGTTTATTTAGA+TGG | 0.271057 | 3.1:-42549970 | MS.gene064647:CDS |
| CTTCCATATCCAATCATCTT+TGG | 0.274966 | 3.1:-42551585 | MS.gene064647:CDS |
| GGCTGAAGGGTTTGTGAAAA+AGG | 0.279790 | 3.1:-42550631 | MS.gene064647:CDS |
| AAAATGCTTGACTAAATAAA+TGG | 0.288422 | 3.1:+42549353 | None:intergenic |
| TTGAGCATGCCAATGGCTTT+TGG | 0.299437 | 3.1:+42550144 | None:intergenic |
| TGGGAGCAGCCAAAATGATT+AGG | 0.312521 | 3.1:-42551925 | None:intergenic |
| CTTCGACATCTTACTCTTGA+TGG | 0.312925 | 3.1:-42549739 | MS.gene064647:CDS |
| TTTGACAGCAGAACAATCTT+TGG | 0.313077 | 3.1:-42550988 | MS.gene064647:CDS |
| ATCATTCATATCACTAATTT+GGG | 0.313634 | 3.1:+42551628 | None:intergenic |
| TTAAGCTTGCATATCTCTTT+CGG | 0.318400 | 3.1:+42550075 | None:intergenic |
| GGGAGCAGCCAAAATGATTA+GGG | 0.322517 | 3.1:-42551924 | None:intergenic |
| ATTTGTCAAGAACAACCTTC+TGG | 0.329251 | 3.1:-42551719 | MS.gene064647:CDS |
| ACATACTGTAGCCTAGAAAA+TGG | 0.335209 | 3.1:+42550043 | None:intergenic |
| GTAGTTTCAATCAGTATTGA+TGG | 0.342476 | 3.1:-42550537 | MS.gene064647:CDS |
| TCATCTTCATCCACGCAAAA+TGG | 0.343462 | 3.1:+42551506 | None:intergenic |
| GCGATTGAATGTGCTTGATT+TGG | 0.346678 | 3.1:-42550268 | MS.gene064647:CDS |
| ACCCTTGTTCCAAAGATGAT+TGG | 0.350438 | 3.1:+42551576 | None:intergenic |
| AACACTTTGATTGTCATGTA+TGG | 0.351078 | 3.1:-42551334 | MS.gene064647:CDS |
| GAAGGAATTATACAACCTTC+AGG | 0.353443 | 3.1:+42550678 | None:intergenic |
| GTTCCAAAGATGATTGGATA+TGG | 0.359605 | 3.1:+42551582 | None:intergenic |
| CAAGAGACATACTAATTGAT+TGG | 0.364922 | 3.1:-42551463 | MS.gene064647:CDS |
| AATTGGTCTTGATCGGTGTT+AGG | 0.369886 | 3.1:-42549885 | MS.gene064647:CDS |
| CACACAATTGTCACCATTGT+TGG | 0.377760 | 3.1:-42551419 | MS.gene064647:CDS |
| TGTCGAATTAATATCTTTGA+AGG | 0.378783 | 3.1:+42550660 | None:intergenic |
| AGAGAGAGGGTCAACAAGTT+TGG | 0.384428 | 3.1:+42549607 | None:intergenic |
| TTTGGAGTTGTTCAATAAGA+AGG | 0.390993 | 3.1:-42550970 | MS.gene064647:CDS |
| CAGATCTAATTGCTATTGAT+AGG | 0.396347 | 3.1:+42550388 | None:intergenic |
| AATTAGATCTGATAATTTGA+TGG | 0.396807 | 3.1:-42550376 | MS.gene064647:CDS |
| ACTAAAGCAGCTAAGGGAAT+TGG | 0.398325 | 3.1:-42549902 | MS.gene064647:CDS |
| TCTCAATCATACAATATAGA+AGG | 0.418768 | 3.1:-42551302 | MS.gene064647:CDS |
| CGAAGTGAGAAACTACTTGC+AGG | 0.421414 | 3.1:-42551186 | MS.gene064647:CDS |
| AGTCATTTGATCGATACCTT+GGG | 0.422725 | 3.1:+42551226 | None:intergenic |
| AGATTTGATCGGTAGAGGTT+TGG | 0.429707 | 3.1:-42550565 | MS.gene064647:CDS |
| GTTGTAAGTCCAAGGTTTCT+AGG | 0.430460 | 3.1:+42550118 | None:intergenic |
| ACCTTCTGGATTTGCTAACT+TGG | 0.430954 | 3.1:-42551705 | MS.gene064647:CDS |
| CCACTAGCAATTGTACTCAT+TGG | 0.433772 | 3.1:-42550867 | MS.gene064647:CDS |
| TAAACCTAAAATACTTTAAG+TGG | 0.445904 | 3.1:+42550199 | None:intergenic |
| TTGTCCTCCCTTTCCAACAA+TGG | 0.454219 | 3.1:+42551406 | None:intergenic |
| AAACATCACGTAGAGTTTGT+AGG | 0.455604 | 3.1:+42549980 | None:intergenic |
| AAGGCATTCCATGACTTAAA+CGG | 0.458343 | 3.1:-42550951 | MS.gene064647:CDS |
| CAATCAATTAGTATGTCTCT+TGG | 0.459055 | 3.1:+42551464 | None:intergenic |
| CGCAAAATGGTGCCTTTCGA+TGG | 0.467608 | 3.1:+42551519 | None:intergenic |
| AGAAGACATGGAAACAAAAC+AGG | 0.482020 | 3.1:-42551813 | MS.gene064647:CDS |
| AGACATACTAATTGATTGGT+TGG | 0.487041 | 3.1:-42551459 | MS.gene064647:CDS |
| TGAGATTGTAAGACAAATCA+TGG | 0.487338 | 3.1:+42550730 | None:intergenic |
| TCTTTGATTCAATTAAAAGA+TGG | 0.487524 | 3.1:-42550021 | MS.gene064647:CDS |
| AAACTACAAATTCGTGCAAA+CGG | 0.490604 | 3.1:-42549808 | MS.gene064647:CDS |
| TTGTAGGGATTCTTCTTGCA+AGG | 0.490637 | 3.1:+42550298 | None:intergenic |
| TTTCAAGTTAATTAATTGGA+TGG | 0.493421 | 3.1:+42549269 | None:intergenic |
| TCGGAAAACTAAAGCAGCTA+AGG | 0.494711 | 3.1:-42549909 | MS.gene064647:CDS |
| AGGTTTAGAGAGAACTTTCG+AGG | 0.495270 | 3.1:-42550183 | MS.gene064647:CDS |
| GAAGAATCCCTACAAAATAC+AGG | 0.498878 | 3.1:-42550290 | MS.gene064647:CDS |
| TTAGCAGATTTGATCGGTAG+AGG | 0.498954 | 3.1:-42550570 | MS.gene064647:CDS |
| TAGGTTCTTGAGCATGCCAA+TGG | 0.507040 | 3.1:+42550137 | None:intergenic |
| ATTGTCACCATTGTTGGAAA+GGG | 0.507661 | 3.1:-42551413 | MS.gene064647:CDS |
| ACTAATTGATTGGTTGGTAG+AGG | 0.512792 | 3.1:-42551453 | MS.gene064647:CDS |
| ATTCAATTAAAAGATGGTAT+CGG | 0.513064 | 3.1:-42550015 | MS.gene064647:CDS |
| ATATCTCTTTCGGCATAGCT+TGG | 0.513662 | 3.1:+42550085 | None:intergenic |
| TCGATGAAGGAAAAGTGCAT+TGG | 0.514172 | 3.1:-42549327 | MS.gene064647:CDS |
| TTCGACATCTTACTCTTGAT+GGG | 0.524611 | 3.1:-42549738 | MS.gene064647:CDS |
| GAGTCATTTGATCGATACCT+TGG | 0.525003 | 3.1:+42551225 | None:intergenic |
| AACATCACGTAGAGTTTGTA+GGG | 0.526605 | 3.1:+42549981 | None:intergenic |
| ACTTGTACGTTGTAAGTCCA+AGG | 0.527193 | 3.1:+42550110 | None:intergenic |
| AAGATAGAAATACACAAGAA+TGG | 0.528140 | 3.1:-42550827 | MS.gene064647:CDS |
| GATATTAATTCGACAATGGA+TGG | 0.530264 | 3.1:-42550652 | MS.gene064647:CDS |
| GATGTTTATTTAGATGGTGG+TGG | 0.537439 | 3.1:-42549964 | MS.gene064647:CDS |
| TGTAGGGATTCTTCTTGCAA+GGG | 0.542298 | 3.1:+42550299 | None:intergenic |
| AATTGTCACCATTGTTGGAA+AGG | 0.542331 | 3.1:-42551414 | MS.gene064647:CDS |
| CATCTCAAGACATTACCAAC+TGG | 0.546057 | 3.1:-42549424 | MS.gene064647:CDS |
| TGTGTACTTCCAAAAGCCAT+TGG | 0.549167 | 3.1:-42550153 | MS.gene064647:CDS |
| ATTCGACAATGGATGGCTGA+AGG | 0.550766 | 3.1:-42550645 | MS.gene064647:CDS |
| GTCACCATTGTTGGAAAGGG+AGG | 0.551060 | 3.1:-42551410 | MS.gene064647:CDS |
| CTAAGGGAATTGGTCTTGAT+CGG | 0.551255 | 3.1:-42549892 | MS.gene064647:CDS |
| GCTCAAGAACCTAGAAACCT+TGG | 0.554042 | 3.1:-42550127 | MS.gene064647:CDS |
| AGCTGATGCTGAAGAAGACA+TGG | 0.562980 | 3.1:-42551825 | MS.gene064647:CDS |
| TTCAAGTGTTGAATGCCAGT+TGG | 0.563441 | 3.1:+42549409 | None:intergenic |
| TTCGACAATGGATGGCTGAA+GGG | 0.564915 | 3.1:-42550644 | MS.gene064647:CDS |
| GTGCTTGATTTGGAGCATGT+TGG | 0.567851 | 3.1:-42550258 | MS.gene064647:CDS |
| TCCAATCATCTTTGGAACAA+GGG | 0.569585 | 3.1:-42551577 | MS.gene064647:CDS |
| ACATCGGAAGATGTTGCAGA+TGG | 0.570923 | 3.1:-42550597 | MS.gene064647:CDS |
| CTAGCAATTGTACTCATTGG+TGG | 0.571417 | 3.1:-42550864 | MS.gene064647:CDS |
| ATCCAATCATCTTTGGAACA+AGG | 0.572779 | 3.1:-42551578 | MS.gene064647:CDS |
| CGTGATGTTTATTTAGATGG+TGG | 0.573775 | 3.1:-42549967 | MS.gene064647:CDS |
| GACAGCGTCCGTTTAAGTCA+TGG | 0.576472 | 3.1:+42550943 | None:intergenic |
| GTCAAACTTCCAAAATCTTG+AGG | 0.585132 | 3.1:+42550222 | None:intergenic |
| TGTCTTGAGATGGCGGAGGA+AGG | 0.585308 | 3.1:+42549435 | None:intergenic |
| GTCTTGATCGGTGTTAGGAG+CGG | 0.587330 | 3.1:-42549880 | MS.gene064647:CDS |
| CAAAGATATTAATTCGACAA+TGG | 0.588336 | 3.1:-42550656 | MS.gene064647:CDS |
| CGGAAAACTAAAGCAGCTAA+GGG | 0.589639 | 3.1:-42549908 | MS.gene064647:CDS |
| AAACCTAAAATACTTTAAGT+GGG | 0.596587 | 3.1:+42550200 | None:intergenic |
| ACCAAGTTAGCAAATCCAGA+AGG | 0.597593 | 3.1:+42551704 | None:intergenic |
| GTTGAAGTGTATGAACTGAA+AGG | 0.600364 | 3.1:-42551011 | MS.gene064647:CDS |
| GTCATTTGATCGATACCTTG+GGG | 0.600868 | 3.1:+42551227 | None:intergenic |
| ATTGTTGGAAAGGGAGGACA+AGG | 0.600888 | 3.1:-42551404 | MS.gene064647:CDS |
| TGGTGAATGATTTCTACCAC+GGG | 0.602687 | 3.1:+42549289 | None:intergenic |
| AGCATTGTTGCTAAGAGAGA+GGG | 0.603653 | 3.1:+42549594 | None:intergenic |
| AGAGTAAGATGTCGAAGCAA+AGG | 0.605007 | 3.1:+42549745 | None:intergenic |
| GGAGCAGCCAAAATGATTAG+GGG | 0.605859 | 3.1:-42551923 | None:intergenic |
| GAGCTTCAAGCACGTGCCCG+TGG | 0.608005 | 3.1:-42549305 | MS.gene064647:CDS |
| GTAAAGCTAATCCAAGAGCT+CGG | 0.608114 | 3.1:-42549928 | MS.gene064647:CDS |
| ATGGTGAATGATTTCTACCA+CGG | 0.609617 | 3.1:+42549288 | None:intergenic |
| GGAAAGCATTGAAAGCTCAC+AGG | 0.609748 | 3.1:-42550355 | MS.gene064647:CDS |
| ACAATGCTTATGAAGCTGAA+AGG | 0.610300 | 3.1:-42549579 | MS.gene064647:CDS |
| ACAATATAGAAGGCTTGCTG+AGG | 0.610339 | 3.1:-42551292 | MS.gene064647:CDS |
| GGATATTTAGCAGATTTGAT+CGG | 0.612503 | 3.1:-42550576 | MS.gene064647:CDS |
| AAGCATTGTTGCTAAGAGAG+AGG | 0.615556 | 3.1:+42549593 | None:intergenic |
| TTGGTAATGTCTTGAGATGG+CGG | 0.619033 | 3.1:+42549428 | None:intergenic |
| AGATGTCGAAGCAAAGGTGG+TGG | 0.623567 | 3.1:+42549751 | None:intergenic |
| AGTTAGAGATGTTGCCTGTG+TGG | 0.626295 | 3.1:-42549714 | MS.gene064647:CDS |
| TACTGCAACAAACTTAAACA+TGG | 0.631987 | 3.1:-42551546 | MS.gene064647:CDS |
| AATTACATCATTATCGACGA+AGG | 0.635729 | 3.1:-42549490 | MS.gene064647:CDS |
| CAATATAGAAGGCTTGCTGA+GGG | 0.643254 | 3.1:-42551291 | MS.gene064647:CDS |
| TGGTGGTGGTGAAAATGAAG+TGG | 0.652349 | 3.1:-42549950 | MS.gene064647:CDS |
| AGTGATATGAATGATGCAAG+TGG | 0.653574 | 3.1:-42551620 | MS.gene064647:CDS |
| ATTTGATCGATACCTTGGGG+AGG | 0.659857 | 3.1:+42551230 | None:intergenic |
| CAATTAAAAGATGGTATCGG+AGG | 0.660717 | 3.1:-42550012 | MS.gene064647:CDS |
| CAAGGAGCAAATCCTCCCCA+AGG | 0.665359 | 3.1:-42551242 | MS.gene064647:CDS |
| CCAATGAGTACAATTGCTAG+TGG | 0.670223 | 3.1:+42550867 | None:intergenic |
| AAACATGGAGAACCATCGAA+AGG | 0.671945 | 3.1:-42551531 | MS.gene064647:CDS |
| TTGCGTGGATGAAGATGATG+TGG | 0.678229 | 3.1:-42551501 | MS.gene064647:CDS |
| CAGTTGGTAATGTCTTGAGA+TGG | 0.687398 | 3.1:+42549425 | None:intergenic |
| GTGGATGAAGATGATGTGGT+AGG | 0.695906 | 3.1:-42551497 | MS.gene064647:CDS |
| GTAAGATGTCGAAGCAAAGG+TGG | 0.698319 | 3.1:+42549748 | None:intergenic |
| TCGTGCAAACGGATATAACA+CGG | 0.709506 | 3.1:-42549797 | MS.gene064647:CDS |
| GTAATGTCTTGAGATGGCGG+AGG | 0.719652 | 3.1:+42549431 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTGAAGATAAAAAAAATTGT+AGG | - | chr3.1:42550430-42550449 | MS.gene064647:CDS | 15.0% |
| !!! | AGATATATCAATAAGATTTT+CGG | + | chr3.1:42550275-42550294 | None:intergenic | 15.0% |
| !!! | TTAATTCTTCACATTTTTTA+AGG | + | chr3.1:42550726-42550745 | None:intergenic | 15.0% |
| !! | AAAATGCTTGACTAAATAAA+TGG | + | chr3.1:42551842-42551861 | None:intergenic | 20.0% |
| !! | AAAATTGTTGAAAAATGCAA+TGG | - | chr3.1:42550298-42550317 | MS.gene064647:CDS | 20.0% |
| !! | AAACCTAAAATACTTTAAGT+GGG | + | chr3.1:42550995-42551014 | None:intergenic | 20.0% |
| !! | AATTAGATCTGATAATTTGA+TGG | - | chr3.1:42550816-42550835 | MS.gene064647:CDS | 20.0% |
| !! | ATAAAAAAAATTGTAGGTCT+CGG | - | chr3.1:42550436-42550455 | MS.gene064647:CDS | 20.0% |
| !! | ATCATTCATATCACTAATTT+GGG | + | chr3.1:42549567-42549586 | None:intergenic | 20.0% |
| !! | ATTCAATTAAAAGATGGTAT+CGG | - | chr3.1:42551177-42551196 | MS.gene064647:CDS | 20.0% |
| !! | TAAACCTAAAATACTTTAAG+TGG | + | chr3.1:42550996-42551015 | None:intergenic | 20.0% |
| !! | TCTTTGATTCAATTAAAAGA+TGG | - | chr3.1:42551171-42551190 | MS.gene064647:CDS | 20.0% |
| !!! | ATGTATGGAATTTACAATTT+TGG | - | chr3.1:42550056-42550075 | MS.gene064647:CDS | 20.0% |
| !!! | GATATATCAATAAGATTTTC+GGG | + | chr3.1:42550274-42550293 | None:intergenic | 20.0% |
| !!! | TGTATGGAATTTACAATTTT+GGG | - | chr3.1:42550057-42550076 | MS.gene064647:CDS | 20.0% |
| !!! | TTAACAAGATTTTGAAGTTT+TGG | + | chr3.1:42551507-42551526 | None:intergenic | 20.0% |
| ! | AAAGGATAGGTTAAAAACAT+CGG | - | chr3.1:42550579-42550598 | MS.gene064647:CDS | 25.0% |
| ! | AAGATAGAAATACACAAGAA+TGG | - | chr3.1:42550365-42550384 | MS.gene064647:CDS | 25.0% |
| ! | AATCAATGAGATGCAAAAAA+TGG | - | chr3.1:42551359-42551378 | MS.gene064647:CDS | 25.0% |
| ! | CAAAGATATTAATTCGACAA+TGG | - | chr3.1:42550536-42550555 | MS.gene064647:CDS | 25.0% |
| ! | CATCATTCATATCACTAATT+TGG | + | chr3.1:42549568-42549587 | None:intergenic | 25.0% |
| ! | TCTCAATCATACAATATAGA+AGG | - | chr3.1:42549890-42549909 | MS.gene064647:CDS | 25.0% |
| ! | TGTCGAATTAATATCTTTGA+AGG | + | chr3.1:42550535-42550554 | None:intergenic | 25.0% |
| !! | CATTTTATCATCTGTTAGTT+GGG | + | chr3.1:42551547-42551566 | None:intergenic | 25.0% |
| !! | GCCATGATTGATAATAAAAA+GGG | - | chr3.1:42550094-42550113 | MS.gene064647:CDS | 25.0% |
| !! | TCATTTTATCATCTGTTAGT+TGG | + | chr3.1:42551548-42551567 | None:intergenic | 25.0% |
| !! | TGCCATGATTGATAATAAAA+AGG | - | chr3.1:42550093-42550112 | MS.gene064647:CDS | 25.0% |
| !!! | AAGTCATGTTTGTTGTATTT+TGG | - | chr3.1:42550484-42550503 | MS.gene064647:CDS | 25.0% |
| !!! | ATGACCAATCATTTTTAACT+GGG | - | chr3.1:42550770-42550789 | MS.gene064647:CDS | 25.0% |
| !!! | TATTTTGGATTATATCCTGA+AGG | - | chr3.1:42550499-42550518 | MS.gene064647:CDS | 25.0% |
| !!! | TCATGTCTGAAATTTCTTTT+GGG | + | chr3.1:42549298-42549317 | None:intergenic | 25.0% |
| !!! | TTCATGTCTGAAATTTCTTT+TGG | + | chr3.1:42549299-42549318 | None:intergenic | 25.0% |
| AAACTACAAATTCGTGCAAA+CGG | - | chr3.1:42551384-42551403 | MS.gene064647:CDS | 30.0% | |
| AACACTTTGATTGTCATGTA+TGG | - | chr3.1:42549858-42549877 | MS.gene064647:CDS | 30.0% | |
| AATTACATCATTATCGACGA+AGG | - | chr3.1:42551702-42551721 | MS.gene064647:CDS | 30.0% | |
| AGACATACTAATTGATTGGT+TGG | - | chr3.1:42549733-42549752 | MS.gene064647:CDS | 30.0% | |
| CAAGAGACATACTAATTGAT+TGG | - | chr3.1:42549729-42549748 | MS.gene064647:CDS | 30.0% | |
| CAATCAATTAGTATGTCTCT+TGG | + | chr3.1:42549731-42549750 | None:intergenic | 30.0% | |
| CTACGTGATGTTTATTTAGA+TGG | - | chr3.1:42551222-42551241 | MS.gene064647:CDS | 30.0% | |
| GATATTAATTCGACAATGGA+TGG | - | chr3.1:42550540-42550559 | MS.gene064647:CDS | 30.0% | |
| GCAACTATATCTTGAAGATT+TGG | - | chr3.1:42551671-42551690 | MS.gene064647:CDS | 30.0% | |
| GGATATTTAGCAGATTTGAT+CGG | - | chr3.1:42550616-42550635 | MS.gene064647:CDS | 30.0% | |
| TACTGCAACAAACTTAAACA+TGG | - | chr3.1:42549646-42549665 | MS.gene064647:CDS | 30.0% | |
| TGAGATTGTAAGACAAATCA+TGG | + | chr3.1:42550465-42550484 | None:intergenic | 30.0% | |
| TTAAGCTTGCATATCTCTTT+CGG | + | chr3.1:42551120-42551139 | None:intergenic | 30.0% | |
| ! | CAGATCTAATTGCTATTGAT+AGG | + | chr3.1:42550807-42550826 | None:intergenic | 30.0% |
| ! | GCCCTTTTTATTATCAATCA+TGG | + | chr3.1:42550098-42550117 | None:intergenic | 30.0% |
| ! | GTAGTTTCAATCAGTATTGA+TGG | - | chr3.1:42550655-42550674 | MS.gene064647:CDS | 30.0% |
| ! | TTTGGAGTTGTTCAATAAGA+AGG | - | chr3.1:42550222-42550241 | MS.gene064647:CDS | 30.0% |
| ! | TTTTTGCAAGAATATTAGCG+AGG | - | chr3.1:42550747-42550766 | MS.gene064647:CDS | 30.0% |
| !! | GAAAGGTTACATTTTCAAGA+TGG | - | chr3.1:42551630-42551649 | MS.gene064647:CDS | 30.0% |
| !! | GATGACCAATCATTTTTAAC+TGG | - | chr3.1:42550769-42550788 | MS.gene064647:CDS | 30.0% |
| !! | TGACCCACTTAAAGTATTTT+AGG | - | chr3.1:42550989-42551008 | MS.gene064647:CDS | 30.0% |
| !! | TTTTTGCATCTCATTGATTG+AGG | + | chr3.1:42551358-42551377 | None:intergenic | 30.0% |
| !!! | CAAGCATTTTTTTTCGATGA+AGG | - | chr3.1:42551852-42551871 | MS.gene064647:CDS | 30.0% |
| !!! | TTGTCGTTTTTGATGATGTA+TGG | - | chr3.1:42550041-42550060 | MS.gene064647:CDS | 30.0% |
| AAACATCACGTAGAGTTTGT+AGG | + | chr3.1:42551215-42551234 | None:intergenic | 35.0% | |
| AACATCACGTAGAGTTTGTA+GGG | + | chr3.1:42551214-42551233 | None:intergenic | 35.0% | |
| AAGGGTTTGTGAAAAAGGAT+AGG | - | chr3.1:42550566-42550585 | MS.gene064647:CDS | 35.0% | |
| AATTGTCACCATTGTTGGAA+AGG | - | chr3.1:42549778-42549797 | MS.gene064647:CDS | 35.0% | |
| ACAATGCTTATGAAGCTGAA+AGG | - | chr3.1:42551613-42551632 | MS.gene064647:CDS | 35.0% | |
| ACATACTGTAGCCTAGAAAA+TGG | + | chr3.1:42551152-42551171 | None:intergenic | 35.0% | |
| AGAAGACATGGAAACAAAAC+AGG | - | chr3.1:42549379-42549398 | MS.gene064647:CDS | 35.0% | |
| AGTCATTTGATCGATACCTT+GGG | + | chr3.1:42549969-42549988 | None:intergenic | 35.0% | |
| AGTGATATGAATGATGCAAG+TGG | - | chr3.1:42549572-42549591 | MS.gene064647:CDS | 35.0% | |
| ATGGTGAATGATTTCTACCA+CGG | + | chr3.1:42551907-42551926 | None:intergenic | 35.0% | |
| ATTGTCACCATTGTTGGAAA+GGG | - | chr3.1:42549779-42549798 | MS.gene064647:CDS | 35.0% | |
| ATTTGTCAAGAACAACCTTC+TGG | - | chr3.1:42549473-42549492 | MS.gene064647:CDS | 35.0% | |
| CCATCCCAGTTAAAAATGAT+TGG | + | chr3.1:42550777-42550796 | None:intergenic | 35.0% | |
| CGTGATGTTTATTTAGATGG+TGG | - | chr3.1:42551225-42551244 | MS.gene064647:CDS | 35.0% | |
| CTTCCATATCCAATCATCTT+TGG | - | chr3.1:42549607-42549626 | MS.gene064647:CDS | 35.0% | |
| GAAACTACTTGCAGGAAAAA+AGG | - | chr3.1:42550014-42550033 | MS.gene064647:CDS | 35.0% | |
| GAAGAATCCCTACAAAATAC+AGG | - | chr3.1:42550902-42550921 | MS.gene064647:CDS | 35.0% | |
| GAAGGAATTATACAACCTTC+AGG | + | chr3.1:42550517-42550536 | None:intergenic | 35.0% | |
| GTCAAACTTCCAAAATCTTG+AGG | + | chr3.1:42550973-42550992 | None:intergenic | 35.0% | |
| GTTCCAAAGATGATTGGATA+TGG | + | chr3.1:42549613-42549632 | None:intergenic | 35.0% | |
| GTTGAAGTGTATGAACTGAA+AGG | - | chr3.1:42550181-42550200 | MS.gene064647:CDS | 35.0% | |
| TTCGACATCTTACTCTTGAT+GGG | - | chr3.1:42551454-42551473 | MS.gene064647:CDS | 35.0% | |
| TTTGACAGCAGAACAATCTT+TGG | - | chr3.1:42550204-42550223 | MS.gene064647:CDS | 35.0% | |
| ! | AAGGCATTCCATGACTTAAA+CGG | - | chr3.1:42550241-42550260 | MS.gene064647:CDS | 35.0% |
| ! | CAATTAAAAGATGGTATCGG+AGG | - | chr3.1:42551180-42551199 | MS.gene064647:CDS | 35.0% |
| ! | CACAAGTTTTACGAACAACA+AGG | - | chr3.1:42549932-42549951 | MS.gene064647:CDS | 35.0% |
| ! | CTTGATGTTCCTCAAGATTT+TGG | - | chr3.1:42550961-42550980 | MS.gene064647:CDS | 35.0% |
| ! | GATGTTTATTTAGATGGTGG+TGG | - | chr3.1:42551228-42551247 | MS.gene064647:CDS | 35.0% |
| ! | TCAATCGCCTGTATTTTGTA+GGG | + | chr3.1:42550912-42550931 | None:intergenic | 35.0% |
| ! | TTCAATCGCCTGTATTTTGT+AGG | + | chr3.1:42550913-42550932 | None:intergenic | 35.0% |
| !! | AAAAAGCTACGCCATTTTCT+AGG | - | chr3.1:42551138-42551157 | MS.gene064647:CDS | 35.0% |
| !! | ACTAATTGATTGGTTGGTAG+AGG | - | chr3.1:42549739-42549758 | MS.gene064647:CDS | 35.0% |
| !! | ATCCAATCATCTTTGGAACA+AGG | - | chr3.1:42549614-42549633 | MS.gene064647:CDS | 35.0% |
| !! | CCAATCATTTTTAACTGGGA+TGG | - | chr3.1:42550774-42550793 | MS.gene064647:CDS | 35.0% |
| !! | GGTTACATTTTCAAGATGGA+TGG | - | chr3.1:42551634-42551653 | MS.gene064647:CDS | 35.0% |
| !! | TCCAATCATCTTTGGAACAA+GGG | - | chr3.1:42549615-42549634 | MS.gene064647:CDS | 35.0% |
| AAAAACCACTCTTGCGAAGA+AGG | - | chr3.1:42549811-42549830 | MS.gene064647:CDS | 40.0% | |
| AAAAACCTTCTTCGCAAGAG+TGG | + | chr3.1:42549819-42549838 | None:intergenic | 40.0% | |
| AAACATGGAGAACCATCGAA+AGG | - | chr3.1:42549661-42549680 | MS.gene064647:CDS | 40.0% | |
| ACCAAGTTAGCAAATCCAGA+AGG | + | chr3.1:42549491-42549510 | None:intergenic | 40.0% | |
| ACCCTTGTTCCAAAGATGAT+TGG | + | chr3.1:42549619-42549638 | None:intergenic | 40.0% | |
| ACTAAAGCAGCTAAGGGAAT+TGG | - | chr3.1:42551290-42551309 | MS.gene064647:CDS | 40.0% | |
| ACTTGTACGTTGTAAGTCCA+AGG | + | chr3.1:42551085-42551104 | None:intergenic | 40.0% | |
| AGAGTAAGATGTCGAAGCAA+AGG | + | chr3.1:42551450-42551469 | None:intergenic | 40.0% | |
| AGATTTGATCGGTAGAGGTT+TGG | - | chr3.1:42550627-42550646 | MS.gene064647:CDS | 40.0% | |
| AGCATTGTTGCTAAGAGAGA+GGG | + | chr3.1:42551601-42551620 | None:intergenic | 40.0% | |
| AGGTTTAGAGAGAACTTTCG+AGG | - | chr3.1:42551009-42551028 | MS.gene064647:CDS | 40.0% | |
| ATATCTCTTTCGGCATAGCT+TGG | + | chr3.1:42551110-42551129 | None:intergenic | 40.0% | |
| CACACAATTGTCACCATTGT+TGG | - | chr3.1:42549773-42549792 | MS.gene064647:CDS | 40.0% | |
| CATCTCAAGACATTACCAAC+TGG | - | chr3.1:42551768-42551787 | MS.gene064647:CDS | 40.0% | |
| CCAATGAGTACAATTGCTAG+TGG | + | chr3.1:42550328-42550347 | None:intergenic | 40.0% | |
| CCACTAGCAATTGTACTCAT+TGG | - | chr3.1:42550325-42550344 | MS.gene064647:CDS | 40.0% | |
| CGGAAAACTAAAGCAGCTAA+GGG | - | chr3.1:42551284-42551303 | MS.gene064647:CDS | 40.0% | |
| CTAGCAATTGTACTCATTGG+TGG | - | chr3.1:42550328-42550347 | MS.gene064647:CDS | 40.0% | |
| CTTCGACATCTTACTCTTGA+TGG | - | chr3.1:42551453-42551472 | MS.gene064647:CDS | 40.0% | |
| GAGTCATTTGATCGATACCT+TGG | + | chr3.1:42549970-42549989 | None:intergenic | 40.0% | |
| GCGATTGAATGTGCTTGATT+TGG | - | chr3.1:42550924-42550943 | MS.gene064647:CDS | 40.0% | |
| GTAAAGCTAATCCAAGAGCT+CGG | - | chr3.1:42551264-42551283 | MS.gene064647:CDS | 40.0% | |
| GTCATTTGATCGATACCTTG+GGG | + | chr3.1:42549968-42549987 | None:intergenic | 40.0% | |
| GTTGTAAGTCCAAGGTTTCT+AGG | + | chr3.1:42551077-42551096 | None:intergenic | 40.0% | |
| TCATCTTCATCCACGCAAAA+TGG | + | chr3.1:42549689-42549708 | None:intergenic | 40.0% | |
| TCGGAAAACTAAAGCAGCTA+AGG | - | chr3.1:42551283-42551302 | MS.gene064647:CDS | 40.0% | |
| TCGTGCAAACGGATATAACA+CGG | - | chr3.1:42551395-42551414 | MS.gene064647:CDS | 40.0% | |
| TGGTGAATGATTTCTACCAC+GGG | + | chr3.1:42551906-42551925 | None:intergenic | 40.0% | |
| TGTAGGGATTCTTCTTGCAA+GGG | + | chr3.1:42550896-42550915 | None:intergenic | 40.0% | |
| TGTGTACTTCCAAAAGCCAT+TGG | - | chr3.1:42551039-42551058 | MS.gene064647:CDS | 40.0% | |
| TTAGCAGATTTGATCGGTAG+AGG | - | chr3.1:42550622-42550641 | MS.gene064647:CDS | 40.0% | |
| TTGTAGGGATTCTTCTTGCA+AGG | + | chr3.1:42550897-42550916 | None:intergenic | 40.0% | |
| ! | AAGCATTGTTGCTAAGAGAG+AGG | + | chr3.1:42551602-42551621 | None:intergenic | 40.0% |
| ! | TCGATGAAGGAAAAGTGCAT+TGG | - | chr3.1:42551865-42551884 | MS.gene064647:CDS | 40.0% |
| !! | AATTGGTCTTGATCGGTGTT+AGG | - | chr3.1:42551307-42551326 | MS.gene064647:CDS | 40.0% |
| !! | ACAATATAGAAGGCTTGCTG+AGG | - | chr3.1:42549900-42549919 | MS.gene064647:CDS | 40.0% |
| !! | ACCTTCTGGATTTGCTAACT+TGG | - | chr3.1:42549487-42549506 | MS.gene064647:CDS | 40.0% |
| !! | CAATATAGAAGGCTTGCTGA+GGG | - | chr3.1:42549901-42549920 | MS.gene064647:CDS | 40.0% |
| !! | CAGTTGGTAATGTCTTGAGA+TGG | + | chr3.1:42551770-42551789 | None:intergenic | 40.0% |
| !! | CTAAGGGAATTGGTCTTGAT+CGG | - | chr3.1:42551300-42551319 | MS.gene064647:CDS | 40.0% |
| !! | TTCAAGTGTTGAATGCCAGT+TGG | + | chr3.1:42551786-42551805 | None:intergenic | 40.0% |
| !! | TTGGTAATGTCTTGAGATGG+CGG | + | chr3.1:42551767-42551786 | None:intergenic | 40.0% |
| !!! | TGAAGTTTTGGAATCCACAC+AGG | + | chr3.1:42551495-42551514 | None:intergenic | 40.0% |
| ACATCGGAAGATGTTGCAGA+TGG | - | chr3.1:42550595-42550614 | MS.gene064647:CDS | 45.0% | |
| AGAGAGAGGGTCAACAAGTT+TGG | + | chr3.1:42551588-42551607 | None:intergenic | 45.0% | |
| AGCTGATGCTGAAGAAGACA+TGG | - | chr3.1:42549367-42549386 | MS.gene064647:CDS | 45.0% | |
| AGTTAGAGATGTTGCCTGTG+TGG | - | chr3.1:42551478-42551497 | MS.gene064647:CDS | 45.0% | |
| ATTCGACAATGGATGGCTGA+AGG | - | chr3.1:42550547-42550566 | MS.gene064647:CDS | 45.0% | |
| ATTGTTGGAAAGGGAGGACA+AGG | - | chr3.1:42549788-42549807 | MS.gene064647:CDS | 45.0% | |
| ATTTGATCGATACCTTGGGG+AGG | + | chr3.1:42549965-42549984 | None:intergenic | 45.0% | |
| CGAAGTGAGAAACTACTTGC+AGG | - | chr3.1:42550006-42550025 | MS.gene064647:CDS | 45.0% | |
| GCTCAAGAACCTAGAAACCT+TGG | - | chr3.1:42551065-42551084 | MS.gene064647:CDS | 45.0% | |
| GGCTGAAGGGTTTGTGAAAA+AGG | - | chr3.1:42550561-42550580 | MS.gene064647:CDS | 45.0% | |
| GTAAGATGTCGAAGCAAAGG+TGG | + | chr3.1:42551447-42551466 | None:intergenic | 45.0% | |
| GTGGATGAAGATGATGTGGT+AGG | - | chr3.1:42549695-42549714 | MS.gene064647:CDS | 45.0% | |
| TAGGTTCTTGAGCATGCCAA+TGG | + | chr3.1:42551058-42551077 | None:intergenic | 45.0% | |
| TTCGACAATGGATGGCTGAA+GGG | - | chr3.1:42550548-42550567 | MS.gene064647:CDS | 45.0% | |
| TTGCGTGGATGAAGATGATG+TGG | - | chr3.1:42549691-42549710 | MS.gene064647:CDS | 45.0% | |
| TTGTCCTCCCTTTCCAACAA+TGG | + | chr3.1:42549789-42549808 | None:intergenic | 45.0% | |
| ! | TGGGACACCCCTAATCATTT+TGG | + | chr3.1:42549279-42549298 | None:intergenic | 45.0% |
| ! | TTGAGCATGCCAATGGCTTT+TGG | + | chr3.1:42551051-42551070 | None:intergenic | 45.0% |
| !! | GGAAAGCATTGAAAGCTCAC+AGG | - | chr3.1:42550837-42550856 | MS.gene064647:CDS | 45.0% |
| !! | GTGCTTGATTTGGAGCATGT+TGG | - | chr3.1:42550934-42550953 | MS.gene064647:CDS | 45.0% |
| !! | TGGTGGTGGTGAAAATGAAG+TGG | - | chr3.1:42551242-42551261 | MS.gene064647:CDS | 45.0% |
| !!! | GCTTTAGTTTTCCGAGCTCT+TGG | + | chr3.1:42551278-42551297 | None:intergenic | 45.0% |
| AGATGTCGAAGCAAAGGTGG+TGG | + | chr3.1:42551444-42551463 | None:intergenic | 50.0% | |
| CGCAAAATGGTGCCTTTCGA+TGG | + | chr3.1:42549676-42549695 | None:intergenic | 50.0% | |
| GACAGCGTCCGTTTAAGTCA+TGG | + | chr3.1:42550252-42550271 | None:intergenic | 50.0% | |
| GTCACCATTGTTGGAAAGGG+AGG | - | chr3.1:42549782-42549801 | MS.gene064647:CDS | 50.0% | |
| ! | GTAATGTCTTGAGATGGCGG+AGG | + | chr3.1:42551764-42551783 | None:intergenic | 50.0% |
| !! | GTCTTGATCGGTGTTAGGAG+CGG | - | chr3.1:42551312-42551331 | MS.gene064647:CDS | 50.0% |
| !!! | TCGAAAGGCACCATTTTGCG+TGG | - | chr3.1:42549676-42549695 | MS.gene064647:CDS | 50.0% |
| CAAGGAGCAAATCCTCCCCA+AGG | - | chr3.1:42549950-42549969 | MS.gene064647:CDS | 55.0% | |
| !! | TGTCTTGAGATGGCGGAGGA+AGG | + | chr3.1:42551760-42551779 | None:intergenic | 55.0% |
| GAGCTTCAAGCACGTGCCCG+TGG | - | chr3.1:42551887-42551906 | MS.gene064647:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 42549276 | 42551938 | 42549276 | ID=MS.gene064647 |
| chr3.1 | mRNA | 42549276 | 42551938 | 42549276 | ID=MS.gene064647.t1;Parent=MS.gene064647 |
| chr3.1 | exon | 42549276 | 42551938 | 42549276 | ID=MS.gene064647.t1.exon1;Parent=MS.gene064647.t1 |
| chr3.1 | CDS | 42549276 | 42551938 | 42549276 | ID=cds.MS.gene064647.t1;Parent=MS.gene064647.t1 |
| Gene Sequence |
| Protein sequence |
