Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065347.t1 | RHN73696.1 | 97.8 | 505 | 11 | 0 | 1 | 505 | 47 | 551 | 6.90E-280 | 972.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065347.t1 | Q9C823 | 67.3 | 507 | 152 | 7 | 2 | 502 | 50 | 548 | 8.8e-183 | 641.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene065347.t1 | A0A396J693 | 97.8 | 505 | 11 | 0 | 1 | 505 | 47 | 551 | 5.0e-280 | 972.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene065347 | 0.811473 | 6.88E-51 | -1.69E-46 |
| MS.gene049159 | MS.gene065347 | 0.844666 | 6.56E-59 | -1.69E-46 |
| MS.gene049254 | MS.gene065347 | 0.824673 | 7.11E-54 | -1.69E-46 |
| MS.gene049343 | MS.gene065347 | 0.810076 | 1.38E-50 | -1.69E-46 |
| MS.gene049404 | MS.gene065347 | 0.833185 | 6.17E-56 | -1.69E-46 |
| MS.gene049435 | MS.gene065347 | 0.812741 | 3.64E-51 | -1.69E-46 |
| MS.gene049501 | MS.gene065347 | 0.822359 | 2.47E-53 | -1.69E-46 |
| MS.gene049821 | MS.gene065347 | 0.816417 | 5.59E-52 | -1.69E-46 |
| MS.gene049850 | MS.gene065347 | 0.812817 | 3.50E-51 | -1.69E-46 |
| MS.gene050020 | MS.gene065347 | 0.820573 | 6.39E-53 | -1.69E-46 |
| MS.gene050026 | MS.gene065347 | 0.834756 | 2.49E-56 | -1.69E-46 |
| MS.gene050156 | MS.gene065347 | 0.805102 | 1.57E-49 | -1.69E-46 |
| MS.gene050237 | MS.gene065347 | 0.803812 | 2.92E-49 | -1.69E-46 |
| MS.gene050273 | MS.gene065347 | 0.825373 | 4.86E-54 | -1.69E-46 |
| MS.gene050442 | MS.gene065347 | 0.802817 | 4.69E-49 | -1.69E-46 |
| MS.gene050559 | MS.gene065347 | 0.809855 | 1.54E-50 | -1.69E-46 |
| MS.gene050561 | MS.gene065347 | 0.817659 | 2.94E-52 | -1.69E-46 |
| MS.gene050719 | MS.gene065347 | 0.807409 | 5.13E-50 | -1.69E-46 |
| MS.gene050721 | MS.gene065347 | 0.800851 | 1.19E-48 | -1.69E-46 |
| MS.gene050724 | MS.gene065347 | 0.804695 | 1.91E-49 | -1.69E-46 |
| MS.gene050750 | MS.gene065347 | 0.815544 | 8.76E-52 | -1.69E-46 |
| MS.gene050759 | MS.gene065347 | 0.801462 | 8.90E-49 | -1.69E-46 |
| MS.gene050807 | MS.gene065347 | 0.825561 | 4.38E-54 | -1.69E-46 |
| MS.gene050808 | MS.gene065347 | 0.810859 | 9.35E-51 | -1.69E-46 |
| MS.gene050826 | MS.gene065347 | 0.803168 | 3.96E-49 | -1.69E-46 |
| MS.gene050901 | MS.gene065347 | 0.816797 | 4.60E-52 | -1.69E-46 |
| MS.gene050953 | MS.gene065347 | 0.808754 | 2.65E-50 | -1.69E-46 |
| MS.gene051198 | MS.gene065347 | 0.835805 | 1.36E-56 | -1.69E-46 |
| MS.gene051247 | MS.gene065347 | 0.831288 | 1.82E-55 | -1.69E-46 |
| MS.gene051279 | MS.gene065347 | 0.832111 | 1.14E-55 | -1.69E-46 |
| MS.gene051328 | MS.gene065347 | 0.8011 | 1.06E-48 | -1.69E-46 |
| MS.gene05157 | MS.gene065347 | 0.810358 | 1.20E-50 | -1.69E-46 |
| MS.gene051719 | MS.gene065347 | 0.84399 | 9.97E-59 | -1.69E-46 |
| MS.gene051720 | MS.gene065347 | 0.840877 | 6.67E-58 | -1.69E-46 |
| MS.gene051744 | MS.gene065347 | 0.849307 | 3.52E-60 | -1.69E-46 |
| MS.gene052020 | MS.gene065347 | 0.808123 | 3.62E-50 | -1.69E-46 |
| MS.gene05215 | MS.gene065347 | 0.806001 | 1.02E-49 | -1.69E-46 |
| MS.gene052208 | MS.gene065347 | 0.801853 | 7.40E-49 | -1.69E-46 |
| MS.gene052516 | MS.gene065347 | 0.842055 | 3.27E-58 | -1.69E-46 |
| MS.gene052519 | MS.gene065347 | 0.82942 | 5.20E-55 | -1.69E-46 |
| MS.gene052582 | MS.gene065347 | 0.828761 | 7.51E-55 | -1.69E-46 |
| MS.gene052584 | MS.gene065347 | 0.83361 | 4.83E-56 | -1.69E-46 |
| MS.gene052611 | MS.gene065347 | 0.827337 | 1.65E-54 | -1.69E-46 |
| MS.gene052665 | MS.gene065347 | 0.817634 | 2.98E-52 | -1.69E-46 |
| MS.gene052773 | MS.gene065347 | 0.821174 | 4.64E-53 | -1.69E-46 |
| MS.gene052863 | MS.gene065347 | 0.820039 | 8.47E-53 | -1.69E-46 |
| MS.gene052867 | MS.gene065347 | 0.813464 | 2.53E-51 | -1.69E-46 |
| MS.gene053008 | MS.gene065347 | 0.822225 | 2.65E-53 | -1.69E-46 |
| MS.gene053144 | MS.gene065347 | 0.808488 | 3.02E-50 | -1.69E-46 |
| MS.gene053166 | MS.gene065347 | 0.830091 | 3.57E-55 | -1.69E-46 |
| MS.gene053201 | MS.gene065347 | 0.802843 | 4.63E-49 | -1.69E-46 |
| MS.gene053226 | MS.gene065347 | 0.854135 | 1.51E-61 | -1.69E-46 |
| MS.gene05364 | MS.gene065347 | 0.808359 | 3.22E-50 | -1.69E-46 |
| MS.gene053883 | MS.gene065347 | 0.816971 | 4.20E-52 | -1.69E-46 |
| MS.gene053894 | MS.gene065347 | 0.812791 | 3.55E-51 | -1.69E-46 |
| MS.gene053998 | MS.gene065347 | 0.817421 | 3.33E-52 | -1.69E-46 |
| MS.gene05415 | MS.gene065347 | 0.842457 | 2.56E-58 | -1.69E-46 |
| MS.gene054236 | MS.gene065347 | 0.806473 | 8.09E-50 | -1.69E-46 |
| MS.gene05423 | MS.gene065347 | 0.805421 | 1.35E-49 | -1.69E-46 |
| MS.gene054405 | MS.gene065347 | 0.805322 | 1.41E-49 | -1.69E-46 |
| MS.gene054559 | MS.gene065347 | 0.818316 | 2.09E-52 | -1.69E-46 |
| MS.gene054651 | MS.gene065347 | 0.856376 | 3.36E-62 | -1.69E-46 |
| MS.gene054775 | MS.gene065347 | 0.835444 | 1.67E-56 | -1.69E-46 |
| MS.gene054801 | MS.gene065347 | 0.823255 | 1.53E-53 | -1.69E-46 |
| MS.gene055227 | MS.gene065347 | 0.813677 | 2.27E-51 | -1.69E-46 |
| MS.gene055228 | MS.gene065347 | 0.811639 | 6.33E-51 | -1.69E-46 |
| MS.gene055357 | MS.gene065347 | 0.804136 | 2.50E-49 | -1.69E-46 |
| MS.gene055465 | MS.gene065347 | 0.81822 | 2.20E-52 | -1.69E-46 |
| MS.gene055466 | MS.gene065347 | 0.832411 | 9.60E-56 | -1.69E-46 |
| MS.gene055468 | MS.gene065347 | 0.807366 | 5.24E-50 | -1.69E-46 |
| MS.gene055512 | MS.gene065347 | 0.82714 | 1.84E-54 | -1.69E-46 |
| MS.gene055586 | MS.gene065347 | 0.802416 | 5.67E-49 | -1.69E-46 |
| MS.gene055608 | MS.gene065347 | 0.81165 | 6.30E-51 | -1.69E-46 |
| MS.gene055778 | MS.gene065347 | 0.814975 | 1.17E-51 | -1.69E-46 |
| MS.gene055818 | MS.gene065347 | 0.849747 | 2.65E-60 | -1.69E-46 |
| MS.gene055926 | MS.gene065347 | 0.822867 | 1.88E-53 | -1.69E-46 |
| MS.gene05604 | MS.gene065347 | 0.847435 | 1.16E-59 | -1.69E-46 |
| MS.gene056050 | MS.gene065347 | 0.826355 | 2.84E-54 | -1.69E-46 |
| MS.gene056173 | MS.gene065347 | 0.825538 | 4.44E-54 | -1.69E-46 |
| MS.gene056174 | MS.gene065347 | 0.841238 | 5.36E-58 | -1.69E-46 |
| MS.gene056252 | MS.gene065347 | 0.806292 | 8.83E-50 | -1.69E-46 |
| MS.gene056308 | MS.gene065347 | 0.817582 | 3.06E-52 | -1.69E-46 |
| MS.gene056366 | MS.gene065347 | 0.858499 | 7.90E-63 | -1.69E-46 |
| MS.gene056498 | MS.gene065347 | 0.841771 | 3.88E-58 | -1.69E-46 |
| MS.gene056506 | MS.gene065347 | 0.804248 | 2.37E-49 | -1.69E-46 |
| MS.gene056553 | MS.gene065347 | 0.806543 | 7.82E-50 | -1.69E-46 |
| MS.gene056595 | MS.gene065347 | 0.834064 | 3.72E-56 | -1.69E-46 |
| MS.gene05690 | MS.gene065347 | 0.812352 | 4.43E-51 | -1.69E-46 |
| MS.gene057026 | MS.gene065347 | 0.806336 | 8.64E-50 | -1.69E-46 |
| MS.gene057027 | MS.gene065347 | 0.804128 | 2.51E-49 | -1.69E-46 |
| MS.gene057060 | MS.gene065347 | 0.834428 | 3.01E-56 | -1.69E-46 |
| MS.gene057200 | MS.gene065347 | 0.806933 | 6.47E-50 | -1.69E-46 |
| MS.gene057208 | MS.gene065347 | 0.823202 | 1.57E-53 | -1.69E-46 |
| MS.gene057414 | MS.gene065347 | 0.837982 | 3.77E-57 | -1.69E-46 |
| MS.gene057444 | MS.gene065347 | 0.995832 | 2.20E-220 | -1.69E-46 |
| MS.gene057446 | MS.gene065347 | 0.859848 | 3.11E-63 | -1.69E-46 |
| MS.gene057598 | MS.gene065347 | 0.810106 | 1.36E-50 | -1.69E-46 |
| MS.gene057693 | MS.gene065347 | 0.800407 | 1.46E-48 | -1.69E-46 |
| MS.gene057855 | MS.gene065347 | 0.802886 | 4.53E-49 | -1.69E-46 |
| MS.gene057869 | MS.gene065347 | 0.80457 | 2.03E-49 | -1.69E-46 |
| MS.gene057915 | MS.gene065347 | 0.817433 | 3.31E-52 | -1.69E-46 |
| MS.gene058009 | MS.gene065347 | 0.812711 | 3.70E-51 | -1.69E-46 |
| MS.gene058010 | MS.gene065347 | 0.834412 | 3.04E-56 | -1.69E-46 |
| MS.gene058037 | MS.gene065347 | 0.810274 | 1.25E-50 | -1.69E-46 |
| MS.gene058294 | MS.gene065347 | 0.813465 | 2.53E-51 | -1.69E-46 |
| MS.gene05847 | MS.gene065347 | 0.812625 | 3.86E-51 | -1.69E-46 |
| MS.gene058625 | MS.gene065347 | 0.84886 | 4.68E-60 | -1.69E-46 |
| MS.gene058636 | MS.gene065347 | 0.808246 | 3.40E-50 | -1.69E-46 |
| MS.gene058979 | MS.gene065347 | 0.858896 | 6.01E-63 | -1.69E-46 |
| MS.gene059015 | MS.gene065347 | 0.803264 | 3.79E-49 | -1.69E-46 |
| MS.gene059161 | MS.gene065347 | 0.802729 | 4.89E-49 | -1.69E-46 |
| MS.gene059272 | MS.gene065347 | 0.826751 | 2.28E-54 | -1.69E-46 |
| MS.gene059584 | MS.gene065347 | 0.813082 | 3.06E-51 | -1.69E-46 |
| MS.gene059601 | MS.gene065347 | 0.80397 | 2.70E-49 | -1.69E-46 |
| MS.gene059625 | MS.gene065347 | 0.844856 | 5.83E-59 | -1.69E-46 |
| MS.gene059842 | MS.gene065347 | 0.822683 | 2.08E-53 | -1.69E-46 |
| MS.gene060137 | MS.gene065347 | -0.801164 | 1.02E-48 | -1.69E-46 |
| MS.gene060167 | MS.gene065347 | 0.830823 | 2.36E-55 | -1.69E-46 |
| MS.gene060310 | MS.gene065347 | 0.83618 | 1.09E-56 | -1.69E-46 |
| MS.gene060322 | MS.gene065347 | 0.838835 | 2.27E-57 | -1.69E-46 |
| MS.gene060373 | MS.gene065347 | 0.801194 | 1.01E-48 | -1.69E-46 |
| MS.gene060429 | MS.gene065347 | 0.821037 | 5.00E-53 | -1.69E-46 |
| MS.gene060521 | MS.gene065347 | 0.811613 | 6.41E-51 | -1.69E-46 |
| MS.gene06052 | MS.gene065347 | 0.801396 | 9.18E-49 | -1.69E-46 |
| MS.gene060572 | MS.gene065347 | 0.806016 | 1.01E-49 | -1.69E-46 |
| MS.gene060587 | MS.gene065347 | 0.81144 | 6.99E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 136 sgRNAs with CRISPR-Local
Find 183 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACCAATCCAGCAACTATTTA+TGG | 0.069649 | 2.4:-46844550 | None:intergenic |
| AGAAAGCACTTGGTCTTATT+AGG | 0.215397 | 2.4:-46844405 | None:intergenic |
| AAGGAGTTCTATTCTGAAAT+TGG | 0.237633 | 2.4:+46845294 | MS.gene065347:CDS |
| TTGCAGTTAAGAGATTAAAA+AGG | 0.259648 | 2.4:+46845253 | MS.gene065347:CDS |
| AAGAGTGACGTTTATAGTTT+TGG | 0.282002 | 2.4:+46846385 | MS.gene065347:CDS |
| GTTTATGAGTTTGTAGCTAA+TGG | 0.285632 | 2.4:+46845393 | MS.gene065347:CDS |
| AGCATCATTCGCATCACTTC+AGG | 0.312381 | 2.4:+46844494 | MS.gene065347:CDS |
| TGAACAACGTGTGACATTCT+AGG | 0.318462 | 2.4:-46846640 | None:intergenic |
| GAACCGGACAATTCTGTCTT+AGG | 0.336637 | 2.4:+46844682 | MS.gene065347:CDS |
| CTAATGGGCCCTTAGATAAA+TGG | 0.351205 | 2.4:+46845409 | MS.gene065347:CDS |
| GTGATGTAGCCATTTATCTA+AGG | 0.359817 | 2.4:-46845418 | None:intergenic |
| GGCAAGCTTTAAGAGGAAAA+AGG | 0.361076 | 2.4:+46845275 | MS.gene065347:CDS |
| ATATAAGGATCCAAGAGTTC+AGG | 0.364706 | 2.4:-46846520 | None:intergenic |
| GGAGTTTGGAGCACACCTTA+TGG | 0.365447 | 2.4:+46846246 | MS.gene065347:CDS |
| GAGACATGTTGTAATAAATA+TGG | 0.371184 | 2.4:+46844462 | MS.gene065347:CDS |
| AACATTAGCCAAAGGGAATA+TGG | 0.372680 | 2.4:-46844643 | None:intergenic |
| TTTATGAGTTTGTAGCTAAT+GGG | 0.377084 | 2.4:+46845394 | MS.gene065347:CDS |
| GACATTCTAGGGCGCATAGA+AGG | 0.377991 | 2.4:-46846628 | None:intergenic |
| ATGCCCAAATGGTTGGGTTA+TGG | 0.380103 | 2.4:+46844380 | MS.gene065347:CDS |
| CCACTTAATTGTACCGGAAC+CGG | 0.382108 | 2.4:+46844666 | MS.gene065347:CDS |
| CAACATTAGCAGTAGTTGTA+TGG | 0.382483 | 2.4:+46845031 | MS.gene065347:CDS |
| CGCTTCATATGGCACAAACT+TGG | 0.386602 | 2.4:-46846281 | None:intergenic |
| CCCATCACAACCACCAGGTT+TGG | 0.389287 | 2.4:-46845339 | None:intergenic |
| GAAAGCACTTGGTCTTATTA+GGG | 0.398585 | 2.4:-46844404 | None:intergenic |
| AAGACAGAATTGTCCGGTTC+CGG | 0.400139 | 2.4:-46844679 | None:intergenic |
| GGTCCATAACCCAACCATTT+GGG | 0.401462 | 2.4:-46844383 | None:intergenic |
| GAGTTTGGAGCACACCTTAT+GGG | 0.406213 | 2.4:+46846247 | MS.gene065347:CDS |
| GGGGAGGTCGCAGCTTAGAT+TGG | 0.408202 | 2.4:+46845448 | MS.gene065347:CDS |
| GTGCTGCTGGACGAGGAGTT+TGG | 0.414569 | 2.4:+46846232 | MS.gene065347:CDS |
| GTAGATGAGGAAGATATATA+AGG | 0.419173 | 2.4:-46846535 | None:intergenic |
| AGACAAGGTCAACCACCTTC+TGG | 0.419954 | 2.4:-46846585 | None:intergenic |
| GGGTCCATAACCCAACCATT+TGG | 0.423562 | 2.4:-46844384 | None:intergenic |
| CTCTCATGCATCGCTTCATA+TGG | 0.423953 | 2.4:-46846292 | None:intergenic |
| TCTTTGTTGTAAGCTCGTTT+CGG | 0.431786 | 2.4:-46846366 | None:intergenic |
| CCAAGTGCTTTCTCCATGTT+GGG | 0.434270 | 2.4:+46844415 | MS.gene065347:CDS |
| GAATAAGTCCATATTCCCTT+TGG | 0.434737 | 2.4:+46844635 | MS.gene065347:CDS |
| AGTTCTATTCTGAAATTGGC+AGG | 0.439600 | 2.4:+46845298 | MS.gene065347:CDS |
| AGTGAAGGAAACCGCCTTGT+TGG | 0.452771 | 2.4:+46845177 | MS.gene065347:CDS |
| CTACTACTCGAAATAGTTAG+TGG | 0.456858 | 2.4:+46846412 | MS.gene065347:CDS |
| GTTGGCAGAGTATATTTGAA+TGG | 0.459965 | 2.4:+46846467 | MS.gene065347:CDS |
| GGAGCACACCTTATGGGTGT+TGG | 0.462484 | 2.4:+46846253 | MS.gene065347:CDS |
| ACCAAGTGCTTTCTCCATGT+TGG | 0.466801 | 2.4:+46844414 | MS.gene065347:CDS |
| GTGAATCCATAAATAGTTGC+TGG | 0.473692 | 2.4:+46844544 | MS.gene065347:CDS |
| TTACCACTGCAAGGATGATA+AGG | 0.474079 | 2.4:-46844990 | None:intergenic |
| TCGAGCTAGTAATGTGCTGC+TGG | 0.476115 | 2.4:+46846219 | MS.gene065347:CDS |
| CTGAAATTGGCAGGGTTGCA+AGG | 0.476585 | 2.4:+46845307 | MS.gene065347:CDS |
| ATGGCTTCTTGTATATAAGC+AGG | 0.478581 | 2.4:+46845050 | MS.gene065347:CDS |
| TCATCGCTACCCTGAACTCT+TGG | 0.480687 | 2.4:+46846510 | MS.gene065347:CDS |
| CATGAGAGGACTGTGATGGC+AGG | 0.482521 | 2.4:+46846307 | MS.gene065347:CDS |
| AGCACCATGCCCAAATGGTT+GGG | 0.487078 | 2.4:+46844374 | None:intergenic |
| CCGGTTCCGGTACAATTAAG+TGG | 0.490246 | 2.4:-46844666 | None:intergenic |
| AGACTCAACAACACTATGTC+GGG | 0.496446 | 2.4:+46844579 | MS.gene065347:CDS |
| TTGGCAGAGTATATTTGAAT+GGG | 0.503697 | 2.4:+46846468 | MS.gene065347:CDS |
| GGGAGGTCGCAGCTTAGATT+GGG | 0.507395 | 2.4:+46845449 | MS.gene065347:CDS |
| CCCAACATGGAGAAAGCACT+TGG | 0.508122 | 2.4:-46844415 | None:intergenic |
| ATCATCCTTGCAGTGGTAAG+TGG | 0.508626 | 2.4:+46844994 | MS.gene065347:CDS |
| GAACAACGTGTGACATTCTA+GGG | 0.509502 | 2.4:-46846639 | None:intergenic |
| TAGTAATGTGCTGCTGGACG+AGG | 0.511455 | 2.4:+46846225 | MS.gene065347:CDS |
| ATGGAAAATCTTTACAAAAG+AGG | 0.512490 | 2.4:+46845128 | MS.gene065347:CDS |
| TCTTTACAAAAGAGGAACTA+AGG | 0.513394 | 2.4:+46845136 | MS.gene065347:CDS |
| ATGTTGGGAGGCCTCAATCA+TGG | 0.517825 | 2.4:+46844430 | MS.gene065347:CDS |
| TCTCTATGTATACTTGACTT+AGG | 0.520787 | 2.4:+46844786 | MS.gene065347:CDS |
| TCCATAAATAGTTGCTGGAT+TGG | 0.523670 | 2.4:+46844549 | MS.gene065347:CDS |
| TATAAGGATCCAAGAGTTCA+GGG | 0.526939 | 2.4:-46846519 | None:intergenic |
| ATAAATAGTTGCTGGATTGG+TGG | 0.527869 | 2.4:+46844552 | MS.gene065347:CDS |
| AATGTTCCACTTAATTGTAC+CGG | 0.527889 | 2.4:+46844660 | MS.gene065347:CDS |
| TCCAAACCTGGTGGTTGTGA+TGG | 0.531323 | 2.4:+46845338 | MS.gene065347:CDS |
| TGTGCAGCACCATGCCCAAA+TGG | 0.532948 | 2.4:+46844369 | None:intergenic |
| TCTGAGTCATTCCATGATTG+AGG | 0.533121 | 2.4:-46844441 | None:intergenic |
| CACTAACTATTTCGAGTAGT+AGG | 0.534554 | 2.4:-46846411 | None:intergenic |
| CAACCTTTGAGCCATCAGCT+TGG | 0.538607 | 2.4:-46845233 | None:intergenic |
| TGATGTAGCCATTTATCTAA+GGG | 0.539000 | 2.4:-46845417 | None:intergenic |
| CTGCTGCTACACTTCCATCA+TGG | 0.540207 | 2.4:+46845109 | MS.gene065347:CDS |
| AGACTGGTGGTACGTACAGT+GGG | 0.541773 | 2.4:+46845208 | MS.gene065347:CDS |
| ACTGTACGTACCACCAGTCT+TGG | 0.542271 | 2.4:-46845205 | None:intergenic |
| CTTGTTGGAGATGCCAAGAC+TGG | 0.542340 | 2.4:+46845192 | MS.gene065347:CDS |
| TTCTGGATAGTACTAGTCTC+TGG | 0.544812 | 2.4:-46846568 | None:intergenic |
| TAAGTGGAACATTAGCCAAA+GGG | 0.545922 | 2.4:-46844650 | None:intergenic |
| GTAATCATATGCACTGCCAT+AGG | 0.545967 | 2.4:+46844962 | MS.gene065347:CDS |
| TGGACAAGCCAACACCCATA+AGG | 0.547153 | 2.4:-46846261 | None:intergenic |
| GCAGCTTAGATTGGGCTATG+AGG | 0.548458 | 2.4:+46845457 | MS.gene065347:CDS |
| TCTAAGCTGCGACCTCCCCT+TGG | 0.552914 | 2.4:-46845444 | None:intergenic |
| CAGCACCATGCCCAAATGGT+TGG | 0.556216 | 2.4:+46844373 | None:intergenic |
| ACAGAATCAACTGCTTGTGC+TGG | 0.557567 | 2.4:-46846442 | None:intergenic |
| AAGCAGTTGATTCTGTGGGT+TGG | 0.558849 | 2.4:+46846449 | MS.gene065347:CDS |
| CATGATGGAAGTGTAGCAGC+AGG | 0.561796 | 2.4:-46845108 | None:intergenic |
| TAATCATATGCACTGCCATA+GGG | 0.562277 | 2.4:+46844963 | MS.gene065347:CDS |
| ATTGCAACGACGCTTGCTCA+AGG | 0.562585 | 2.4:+46845486 | MS.gene065347:CDS |
| TACAGTGGGGTCCAAGCTGA+TGG | 0.563912 | 2.4:+46845222 | MS.gene065347:CDS |
| GGATGATAAGGTATTCCCTA+TGG | 0.566165 | 2.4:-46844978 | None:intergenic |
| ACATTCTAGGGCGCATAGAA+GGG | 0.566800 | 2.4:-46846627 | None:intergenic |
| GTTCCTAAGACAGAATTGTC+CGG | 0.569173 | 2.4:-46844685 | None:intergenic |
| ATGATTGAGGCCTCCCAACA+TGG | 0.578662 | 2.4:-46844428 | None:intergenic |
| TCGTTTCGGTACACAAACTC+TGG | 0.578686 | 2.4:-46846352 | None:intergenic |
| AGCACAAGCAGTTGATTCTG+TGG | 0.580618 | 2.4:+46846444 | MS.gene065347:CDS |
| AAGACTCAACAACACTATGT+CGG | 0.583057 | 2.4:+46844578 | MS.gene065347:CDS |
| ATGGGATGCTGCTATGATCA+TGG | 0.583332 | 2.4:+46845357 | MS.gene065347:CDS |
| AGTGCTTTCTCCATGTTGGG+AGG | 0.583986 | 2.4:+46844418 | MS.gene065347:CDS |
| TAGCGATGAGCTTGAACAAG+AGG | 0.587250 | 2.4:-46846496 | None:intergenic |
| GGTCCAAGCTGATGGCTCAA+AGG | 0.587629 | 2.4:+46845230 | MS.gene065347:CDS |
| ATGAGAGGACTGTGATGGCA+GGG | 0.589701 | 2.4:+46846308 | MS.gene065347:CDS |
| ATATCTCGATGAACAACTTG+TGG | 0.590367 | 2.4:-46846196 | None:intergenic |
| CATATGAAGCGATGCATGAG+AGG | 0.590509 | 2.4:+46846293 | MS.gene065347:CDS |
| ACATGTTGTAATAAATATGG+TGG | 0.592356 | 2.4:+46844465 | MS.gene065347:CDS |
| CCAAACCTGGTGGTTGTGAT+GGG | 0.594189 | 2.4:+46845339 | MS.gene065347:CDS |
| TTAAGTGGAACATTAGCCAA+AGG | 0.596276 | 2.4:-46844651 | None:intergenic |
| TGAGAGGACTGTGATGGCAG+GGG | 0.596780 | 2.4:+46846309 | MS.gene065347:CDS |
| TAAGTCAAGTATACATAGAG+AGG | 0.599321 | 2.4:-46844784 | None:intergenic |
| GCACAAGCAGTTGATTCTGT+GGG | 0.611876 | 2.4:+46846445 | MS.gene065347:CDS |
| AAGGCTTCGACATCCAAACC+TGG | 0.613833 | 2.4:+46845326 | MS.gene065347:CDS |
| TGGCTTCTTGTATATAAGCA+GGG | 0.613910 | 2.4:+46845051 | MS.gene065347:CDS |
| AATGGCTACATCACATACCA+AGG | 0.615578 | 2.4:+46845427 | MS.gene065347:CDS |
| CAGTCTTGGCATCTCCAACA+AGG | 0.616001 | 2.4:-46845191 | None:intergenic |
| TGGTATGATACTAGTAGATG+AGG | 0.621129 | 2.4:-46846548 | None:intergenic |
| CATGTTGTAATAAATATGGT+GGG | 0.621839 | 2.4:+46844466 | MS.gene065347:CDS |
| GAGAGGACTGTGATGGCAGG+GGG | 0.623889 | 2.4:+46846310 | MS.gene065347:CDS |
| AAGACTGGTGGTACGTACAG+TGG | 0.625096 | 2.4:+46845207 | MS.gene065347:CDS |
| TCACTCCACTTACCACTGCA+AGG | 0.631760 | 2.4:-46844999 | None:intergenic |
| ATACCTTATCATCCTTGCAG+TGG | 0.635282 | 2.4:+46844987 | MS.gene065347:CDS |
| GTTCTATTCTGAAATTGGCA+GGG | 0.635807 | 2.4:+46845299 | MS.gene065347:CDS |
| ATGGCTACATCACATACCAA+GGG | 0.641272 | 2.4:+46845428 | MS.gene065347:CDS |
| ATAACCCAACCATTTGGGCA+TGG | 0.642347 | 2.4:-46844378 | None:intergenic |
| GACTAGTACTATCCAGAAGG+TGG | 0.651449 | 2.4:+46846573 | MS.gene065347:CDS |
| AGCATCCCATCACAACCACC+AGG | 0.652225 | 2.4:-46845344 | None:intergenic |
| AGAGACTAGTACTATCCAGA+AGG | 0.665219 | 2.4:+46846570 | MS.gene065347:CDS |
| CATGGTCTGATGATTCACAA+TGG | 0.687957 | 2.4:+46844613 | MS.gene065347:CDS |
| CAAACTCATAAACAATGTAG+CGG | 0.691608 | 2.4:-46845383 | None:intergenic |
| GATGCATGAGAGGACTGTGA+TGG | 0.695690 | 2.4:+46846303 | MS.gene065347:CDS |
| GTTGGAGATGCCAAGACTGG+TGG | 0.695895 | 2.4:+46845195 | MS.gene065347:CDS |
| GCTGCGTGCATGAATAGACA+AGG | 0.705355 | 2.4:-46846600 | None:intergenic |
| AGTATACATAGAGAGGCATG+AGG | 0.707905 | 2.4:-46844777 | None:intergenic |
| CTACATCACATACCAAGGGG+AGG | 0.714671 | 2.4:+46845432 | MS.gene065347:CDS |
| GCTTCGACATCCAAACCTGG+TGG | 0.728669 | 2.4:+46845329 | MS.gene065347:CDS |
| TGGCTACATCACATACCAAG+GGG | 0.729491 | 2.4:+46845429 | MS.gene065347:CDS |
| TCTTGGCATCTCCAACAAGG+CGG | 0.740266 | 2.4:-46845188 | None:intergenic |
| GACTGGTGGTACGTACAGTG+GGG | 0.742017 | 2.4:+46845209 | MS.gene065347:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | GTCTTTTTTTTTTTTTTTTT+TGG | + | chr2.4:46846034-46846053 | MS.gene065347:intron | 10.0% |
| !! | AACATATTTATTACATAAGA+CGG | - | chr2.4:46845827-46845846 | None:intergenic | 15.0% |
| !! | ATTTAATTCATTCTTTCAAA+AGG | + | chr2.4:46844887-46844906 | MS.gene065347:intron | 15.0% |
| !! | TATGAGAGAATAATTCTAAA+TGG | - | chr2.4:46845753-46845772 | None:intergenic | 20.0% |
| !! | TGATTTACTAACAAGAAAAA+AGG | + | chr2.4:46846073-46846092 | MS.gene065347:intron | 20.0% |
| !!! | AAGAAATACTTTTGTTTGAA+GGG | - | chr2.4:46845991-46846010 | None:intergenic | 20.0% |
| !!! | ACATTTTGTATCTGAAAAAA+TGG | - | chr2.4:46844944-46844963 | None:intergenic | 20.0% |
| !!! | TAAGAAATACTTTTGTTTGA+AGG | - | chr2.4:46845992-46846011 | None:intergenic | 20.0% |
| ! | ACATGTTGTAATAAATATGG+TGG | + | chr2.4:46844465-46844484 | MS.gene065347:CDS | 25.0% |
| ! | ATGGAAAATCTTTACAAAAG+AGG | + | chr2.4:46845128-46845147 | MS.gene065347:CDS | 25.0% |
| ! | ATTACGAAAAATTTCAGTGA+AGG | + | chr2.4:46845162-46845181 | MS.gene065347:CDS | 25.0% |
| ! | CATGTTGTAATAAATATGGT+GGG | + | chr2.4:46844466-46844485 | MS.gene065347:CDS | 25.0% |
| ! | GAAAATCTTGAAAACATACA+AGG | - | chr2.4:46845882-46845901 | None:intergenic | 25.0% |
| ! | GAGACATGTTGTAATAAATA+TGG | + | chr2.4:46844462-46844481 | MS.gene065347:CDS | 25.0% |
| ! | GATGTGATTTATTAATCCAA+TGG | - | chr2.4:46845617-46845636 | None:intergenic | 25.0% |
| ! | TGCAGTTAAGAGATTAAAAA+GGG | + | chr2.4:46845254-46845273 | MS.gene065347:CDS | 25.0% |
| ! | TTAGTAAATCAAACTCGTAA+AGG | - | chr2.4:46846064-46846083 | None:intergenic | 25.0% |
| ! | TTGCAGTTAAGAGATTAAAA+AGG | + | chr2.4:46845253-46845272 | MS.gene065347:CDS | 25.0% |
| ! | TTTATGAGTTTGTAGCTAAT+GGG | + | chr2.4:46845394-46845413 | MS.gene065347:CDS | 25.0% |
| !! | TTTGTAAAGATTTTCCATGA+TGG | - | chr2.4:46845126-46845145 | None:intergenic | 25.0% |
| AAATCAGAAAGTCTTAGCAT+TGG | - | chr2.4:46845654-46845673 | None:intergenic | 30.0% | |
| AATGTAAAATGAGAATCCGT+GGG | - | chr2.4:46844831-46844850 | None:intergenic | 30.0% | |
| AATGTTCCACTTAATTGTAC+CGG | + | chr2.4:46844660-46844679 | MS.gene065347:CDS | 30.0% | |
| CAAACTCATAAACAATGTAG+CGG | - | chr2.4:46845386-46845405 | None:intergenic | 30.0% | |
| GAAAAAAACAAACTTGCGTA+TGG | - | chr2.4:46845595-46845614 | None:intergenic | 30.0% | |
| GCTAAGACTTTCTGATTTAA+CGG | + | chr2.4:46845656-46845675 | MS.gene065347:intron | 30.0% | |
| GTAGATGAGGAAGATATATA+AGG | - | chr2.4:46846538-46846557 | None:intergenic | 30.0% | |
| GTTTATGAGTTTGTAGCTAA+TGG | + | chr2.4:46845393-46845412 | MS.gene065347:CDS | 30.0% | |
| TAAGTCAAGTATACATAGAG+AGG | - | chr2.4:46844787-46844806 | None:intergenic | 30.0% | |
| TCTAAATGGACATGTAGAAA+GGG | - | chr2.4:46845739-46845758 | None:intergenic | 30.0% | |
| TCTCTATGTATACTTGACTT+AGG | + | chr2.4:46844786-46844805 | MS.gene065347:CDS | 30.0% | |
| TCTTTACAAAAGAGGAACTA+AGG | + | chr2.4:46845136-46845155 | MS.gene065347:CDS | 30.0% | |
| TGATGTAGCCATTTATCTAA+GGG | - | chr2.4:46845420-46845439 | None:intergenic | 30.0% | |
| TTCTAAATGGACATGTAGAA+AGG | - | chr2.4:46845740-46845759 | None:intergenic | 30.0% | |
| TTGGCAGAGTATATTTGAAT+GGG | + | chr2.4:46846468-46846487 | MS.gene065347:CDS | 30.0% | |
| ! | AAGAGTGACGTTTATAGTTT+TGG | + | chr2.4:46846385-46846404 | MS.gene065347:CDS | 30.0% |
| !! | AAGGAGTTCTATTCTGAAAT+TGG | + | chr2.4:46845294-46845313 | MS.gene065347:CDS | 30.0% |
| !!! | GCAAGTTTGTTTTTTTCCAT+TGG | + | chr2.4:46845598-46845617 | MS.gene065347:intron | 30.0% |
| AAACTTGATACCCATTTCCA+GGG | + | chr2.4:46845908-46845927 | MS.gene065347:intron | 35.0% | |
| AACATTAGCCAAAGGGAATA+TGG | - | chr2.4:46844646-46844665 | None:intergenic | 35.0% | |
| AAGACTCAACAACACTATGT+CGG | + | chr2.4:46844578-46844597 | MS.gene065347:CDS | 35.0% | |
| AAGACTTTCTGATTTAACGG+TGG | + | chr2.4:46845659-46845678 | MS.gene065347:intron | 35.0% | |
| ACCAATCCAGCAACTATTTA+TGG | - | chr2.4:46844553-46844572 | None:intergenic | 35.0% | |
| ATATAAGGATCCAAGAGTTC+AGG | - | chr2.4:46846523-46846542 | None:intergenic | 35.0% | |
| ATATCTCGATGAACAACTTG+TGG | - | chr2.4:46846199-46846218 | None:intergenic | 35.0% | |
| ATGGCTTCTTGTATATAAGC+AGG | + | chr2.4:46845050-46845069 | MS.gene065347:CDS | 35.0% | |
| CAACATTAGCAGTAGTTGTA+TGG | + | chr2.4:46845031-46845050 | MS.gene065347:CDS | 35.0% | |
| CTACTACTCGAAATAGTTAG+TGG | + | chr2.4:46846412-46846431 | MS.gene065347:CDS | 35.0% | |
| GAATAAGTCCATATTCCCTT+TGG | + | chr2.4:46844635-46844654 | MS.gene065347:CDS | 35.0% | |
| GAATGTAAAATGAGAATCCG+TGG | - | chr2.4:46844832-46844851 | None:intergenic | 35.0% | |
| GTGAATCCATAAATAGTTGC+TGG | + | chr2.4:46844544-46844563 | MS.gene065347:CDS | 35.0% | |
| GTGATGTAGCCATTTATCTA+AGG | - | chr2.4:46845421-46845440 | None:intergenic | 35.0% | |
| GTTGGCAGAGTATATTTGAA+TGG | + | chr2.4:46846467-46846486 | MS.gene065347:CDS | 35.0% | |
| TAAGTGGAACATTAGCCAAA+GGG | - | chr2.4:46844653-46844672 | None:intergenic | 35.0% | |
| TAATCATATGCACTGCCATA+GGG | + | chr2.4:46844963-46844982 | MS.gene065347:CDS | 35.0% | |
| TATAAGGATCCAAGAGTTCA+GGG | - | chr2.4:46846522-46846541 | None:intergenic | 35.0% | |
| TCCATAAATAGTTGCTGGAT+TGG | + | chr2.4:46844549-46844568 | MS.gene065347:CDS | 35.0% | |
| TGAAACCCAACAAACATATG+TGG | - | chr2.4:46845936-46845955 | None:intergenic | 35.0% | |
| TGGCTTCTTGTATATAAGCA+GGG | + | chr2.4:46845051-46845070 | MS.gene065347:CDS | 35.0% | |
| TGGTATGATACTAGTAGATG+AGG | - | chr2.4:46846551-46846570 | None:intergenic | 35.0% | |
| TGTTGGGTTTCACTTAGTTA+TGG | + | chr2.4:46845944-46845963 | MS.gene065347:intron | 35.0% | |
| TTAAGTGGAACATTAGCCAA+AGG | - | chr2.4:46844654-46844673 | None:intergenic | 35.0% | |
| ! | AGCCCATAGCATTTTAAACT+CGG | + | chr2.4:46846103-46846122 | MS.gene065347:intron | 35.0% |
| ! | ATAAATAGTTGCTGGATTGG+TGG | + | chr2.4:46844552-46844571 | MS.gene065347:CDS | 35.0% |
| ! | CACCGAGTTTAAAATGCTAT+GGG | - | chr2.4:46846108-46846127 | None:intergenic | 35.0% |
| ! | CACTAACTATTTCGAGTAGT+AGG | - | chr2.4:46846414-46846433 | None:intergenic | 35.0% |
| ! | GCTCTTGTTTATATTACCCA+CGG | + | chr2.4:46844812-46844831 | MS.gene065347:intron | 35.0% |
| ! | TCTTTGTTGTAAGCTCGTTT+CGG | - | chr2.4:46846369-46846388 | None:intergenic | 35.0% |
| !! | AGAAAGCACTTGGTCTTATT+AGG | - | chr2.4:46844408-46844427 | None:intergenic | 35.0% |
| !! | AGTTCTATTCTGAAATTGGC+AGG | + | chr2.4:46845298-46845317 | MS.gene065347:CDS | 35.0% |
| !! | GAAAGCACTTGGTCTTATTA+GGG | - | chr2.4:46844407-46844426 | None:intergenic | 35.0% |
| !! | GTTCTATTCTGAAATTGGCA+GGG | + | chr2.4:46845299-46845318 | MS.gene065347:CDS | 35.0% |
| !! | TAAAAAGGGCAAGCTTTAAG+AGG | + | chr2.4:46845268-46845287 | MS.gene065347:CDS | 35.0% |
| !!! | TTTTTTTCTCCCGTTTCAAC+AGG | + | chr2.4:46846152-46846171 | MS.gene065347:intron | 35.0% |
| AATGGCTACATCACATACCA+AGG | + | chr2.4:46845427-46845446 | MS.gene065347:CDS | 40.0% | |
| AGACTCAACAACACTATGTC+GGG | + | chr2.4:46844579-46844598 | MS.gene065347:CDS | 40.0% | |
| AGAGACTAGTACTATCCAGA+AGG | + | chr2.4:46846570-46846589 | MS.gene065347:CDS | 40.0% | |
| ATACCTTATCATCCTTGCAG+TGG | + | chr2.4:46844987-46845006 | MS.gene065347:CDS | 40.0% | |
| ATGCAGAAACCTGTTGAAAC+GGG | - | chr2.4:46846164-46846183 | None:intergenic | 40.0% | |
| ATGGCTACATCACATACCAA+GGG | + | chr2.4:46845428-46845447 | MS.gene065347:CDS | 40.0% | |
| CATGCAGAAACCTGTTGAAA+CGG | - | chr2.4:46846165-46846184 | None:intergenic | 40.0% | |
| CATGGTCTGATGATTCACAA+TGG | + | chr2.4:46844613-46844632 | MS.gene065347:CDS | 40.0% | |
| GAAACTTGATACCCATTTCC+AGG | + | chr2.4:46845907-46845926 | MS.gene065347:intron | 40.0% | |
| GAACAACGTGTGACATTCTA+GGG | - | chr2.4:46846642-46846661 | None:intergenic | 40.0% | |
| GTAATCATATGCACTGCCAT+AGG | + | chr2.4:46844962-46844981 | MS.gene065347:CDS | 40.0% | |
| GTTCCTAAGACAGAATTGTC+CGG | - | chr2.4:46844688-46844707 | None:intergenic | 40.0% | |
| TCTGAGTCATTCCATGATTG+AGG | - | chr2.4:46844444-46844463 | None:intergenic | 40.0% | |
| TGAACAACGTGTGACATTCT+AGG | - | chr2.4:46846643-46846662 | None:intergenic | 40.0% | |
| TGTAGAAAGGGCCAAATCTA+CGG | - | chr2.4:46845727-46845746 | None:intergenic | 40.0% | |
| TTACCACTGCAAGGATGATA+AGG | - | chr2.4:46844993-46845012 | None:intergenic | 40.0% | |
| ! | AGTATACATAGAGAGGCATG+AGG | - | chr2.4:46844780-46844799 | None:intergenic | 40.0% |
| ! | CATTTTGCTCAAAGTCTGTG+TGG | + | chr2.4:46844522-46844541 | MS.gene065347:CDS | 40.0% |
| ! | CCACCGAGTTTAAAATGCTA+TGG | - | chr2.4:46846109-46846128 | None:intergenic | 40.0% |
| ! | CCATAGCATTTTAAACTCGG+TGG | + | chr2.4:46846106-46846125 | MS.gene065347:intron | 40.0% |
| ! | CTAATGGGCCCTTAGATAAA+TGG | + | chr2.4:46845409-46845428 | MS.gene065347:CDS | 40.0% |
| ! | GGATGATAAGGTATTCCCTA+TGG | - | chr2.4:46844981-46845000 | None:intergenic | 40.0% |
| ! | TTCTGGATAGTACTAGTCTC+TGG | - | chr2.4:46846571-46846590 | None:intergenic | 40.0% |
| !! | GGCAAGCTTTAAGAGGAAAA+AGG | + | chr2.4:46845275-46845294 | MS.gene065347:CDS | 40.0% |
| AACAAACATATGTGGTGCCC+TGG | - | chr2.4:46845928-46845947 | None:intergenic | 45.0% | |
| AAGACAGAATTGTCCGGTTC+CGG | - | chr2.4:46844682-46844701 | None:intergenic | 45.0% | |
| ACAGAATCAACTGCTTGTGC+TGG | - | chr2.4:46846445-46846464 | None:intergenic | 45.0% | |
| ACCAAGTGCTTTCTCCATGT+TGG | + | chr2.4:46844414-46844433 | MS.gene065347:CDS | 45.0% | |
| AGCATCATTCGCATCACTTC+AGG | + | chr2.4:46844494-46844513 | MS.gene065347:CDS | 45.0% | |
| ATAACCCAACCATTTGGGCA+TGG | - | chr2.4:46844381-46844400 | None:intergenic | 45.0% | |
| ATATGTGGTGCCCTGGAAAT+GGG | - | chr2.4:46845921-46845940 | None:intergenic | 45.0% | |
| ATCATCCTTGCAGTGGTAAG+TGG | + | chr2.4:46844994-46845013 | MS.gene065347:CDS | 45.0% | |
| ATGCCCAAATGGTTGGGTTA+TGG | + | chr2.4:46844380-46844399 | MS.gene065347:CDS | 45.0% | |
| ATGGGATGCTGCTATGATCA+TGG | + | chr2.4:46845357-46845376 | MS.gene065347:CDS | 45.0% | |
| CATATGAAGCGATGCATGAG+AGG | + | chr2.4:46846293-46846312 | MS.gene065347:CDS | 45.0% | |
| CCAAATCTACGGTACACAAG+TGG | - | chr2.4:46845716-46845735 | None:intergenic | 45.0% | |
| CCAAGTGCTTTCTCCATGTT+GGG | + | chr2.4:46844415-46844434 | MS.gene065347:CDS | 45.0% | |
| CCACTTAATTGTACCGGAAC+CGG | + | chr2.4:46844666-46844685 | MS.gene065347:CDS | 45.0% | |
| CCACTTGTGTACCGTAGATT+TGG | + | chr2.4:46845713-46845732 | MS.gene065347:intron | 45.0% | |
| CGCTTCATATGGCACAAACT+TGG | - | chr2.4:46846284-46846303 | None:intergenic | 45.0% | |
| CTCTCATGCATCGCTTCATA+TGG | - | chr2.4:46846295-46846314 | None:intergenic | 45.0% | |
| GAACCGGACAATTCTGTCTT+AGG | + | chr2.4:46844682-46844701 | MS.gene065347:CDS | 45.0% | |
| GACTAGTACTATCCAGAAGG+TGG | + | chr2.4:46846573-46846592 | MS.gene065347:CDS | 45.0% | |
| GGGCACCACATATGTTTGTT+GGG | + | chr2.4:46845928-46845947 | MS.gene065347:intron | 45.0% | |
| GGTCCATAACCCAACCATTT+GGG | - | chr2.4:46844386-46844405 | None:intergenic | 45.0% | |
| TAGCGATGAGCTTGAACAAG+AGG | - | chr2.4:46846499-46846518 | None:intergenic | 45.0% | |
| TCGTTTCGGTACACAAACTC+TGG | - | chr2.4:46846355-46846374 | None:intergenic | 45.0% | |
| TGGCTACATCACATACCAAG+GGG | + | chr2.4:46845429-46845448 | MS.gene065347:CDS | 45.0% | |
| ! | AAGCAGTTGATTCTGTGGGT+TGG | + | chr2.4:46846449-46846468 | MS.gene065347:CDS | 45.0% |
| ! | ACACTATGTCGGGTTTTCAG+TGG | + | chr2.4:46844589-46844608 | MS.gene065347:CDS | 45.0% |
| ! | AGCACAAGCAGTTGATTCTG+TGG | + | chr2.4:46846444-46846463 | MS.gene065347:CDS | 45.0% |
| ! | AGGGCACCACATATGTTTGT+TGG | + | chr2.4:46845927-46845946 | MS.gene065347:intron | 45.0% |
| ! | GAGTTTGGAGCACACCTTAT+GGG | + | chr2.4:46846247-46846266 | MS.gene065347:CDS | 45.0% |
| ! | GCACAAGCAGTTGATTCTGT+GGG | + | chr2.4:46846445-46846464 | MS.gene065347:CDS | 45.0% |
| !! | ACATTCTAGGGCGCATAGAA+GGG | - | chr2.4:46846630-46846649 | None:intergenic | 45.0% |
| !!! | ATCTTTTTTATTTTTATTTT+TGG | + | chr2.4:46844913-46844932 | MS.gene065347:intron | 5.0% |
| !!! | TCTTTTTTATTTTTATTTTT+GGG | + | chr2.4:46844914-46844933 | MS.gene065347:intron | 5.0% |
| AAGACTGGTGGTACGTACAG+TGG | + | chr2.4:46845207-46845226 | MS.gene065347:CDS | 50.0% | |
| AAGGCTTCGACATCCAAACC+TGG | + | chr2.4:46845326-46845345 | MS.gene065347:CDS | 50.0% | |
| ACTGTACGTACCACCAGTCT+TGG | - | chr2.4:46845208-46845227 | None:intergenic | 50.0% | |
| AGACAAGGTCAACCACCTTC+TGG | - | chr2.4:46846588-46846607 | None:intergenic | 50.0% | |
| AGACTGGTGGTACGTACAGT+GGG | + | chr2.4:46845208-46845227 | MS.gene065347:CDS | 50.0% | |
| AGTGAAGGAAACCGCCTTGT+TGG | + | chr2.4:46845177-46845196 | MS.gene065347:CDS | 50.0% | |
| AGTGCTTTCTCCATGTTGGG+AGG | + | chr2.4:46844418-46844437 | MS.gene065347:CDS | 50.0% | |
| ATGAGAGGACTGTGATGGCA+GGG | + | chr2.4:46846308-46846327 | MS.gene065347:CDS | 50.0% | |
| ATGATTGAGGCCTCCCAACA+TGG | - | chr2.4:46844431-46844450 | None:intergenic | 50.0% | |
| ATGTTGGGAGGCCTCAATCA+TGG | + | chr2.4:46844430-46844449 | MS.gene065347:CDS | 50.0% | |
| ATTGCAACGACGCTTGCTCA+AGG | + | chr2.4:46845486-46845505 | MS.gene065347:CDS | 50.0% | |
| CAACCTTTGAGCCATCAGCT+TGG | - | chr2.4:46845236-46845255 | None:intergenic | 50.0% | |
| CAGTCTTGGCATCTCCAACA+AGG | - | chr2.4:46845194-46845213 | None:intergenic | 50.0% | |
| CATATGTGGTGCCCTGGAAA+TGG | - | chr2.4:46845922-46845941 | None:intergenic | 50.0% | |
| CCAAACCTGGTGGTTGTGAT+GGG | + | chr2.4:46845339-46845358 | MS.gene065347:CDS | 50.0% | |
| CCGGTTCCGGTACAATTAAG+TGG | - | chr2.4:46844669-46844688 | None:intergenic | 50.0% | |
| CTACATCACATACCAAGGGG+AGG | + | chr2.4:46845432-46845451 | MS.gene065347:CDS | 50.0% | |
| CTGAAATTGGCAGGGTTGCA+AGG | + | chr2.4:46845307-46845326 | MS.gene065347:CDS | 50.0% | |
| CTGCTGCTACACTTCCATCA+TGG | + | chr2.4:46845109-46845128 | MS.gene065347:CDS | 50.0% | |
| CTTGTTGGAGATGCCAAGAC+TGG | + | chr2.4:46845192-46845211 | MS.gene065347:CDS | 50.0% | |
| GATGCATGAGAGGACTGTGA+TGG | + | chr2.4:46846303-46846322 | MS.gene065347:CDS | 50.0% | |
| GCAGCTTAGATTGGGCTATG+AGG | + | chr2.4:46845457-46845476 | MS.gene065347:CDS | 50.0% | |
| GCTGCGTGCATGAATAGACA+AGG | - | chr2.4:46846603-46846622 | None:intergenic | 50.0% | |
| GGGTCCATAACCCAACCATT+TGG | - | chr2.4:46844387-46844406 | None:intergenic | 50.0% | |
| TCACTCCACTTACCACTGCA+AGG | - | chr2.4:46845002-46845021 | None:intergenic | 50.0% | |
| TCATCGCTACCCTGAACTCT+TGG | + | chr2.4:46846510-46846529 | MS.gene065347:CDS | 50.0% | |
| TCCAAACCTGGTGGTTGTGA+TGG | + | chr2.4:46845338-46845357 | MS.gene065347:CDS | 50.0% | |
| TCGAGCTAGTAATGTGCTGC+TGG | + | chr2.4:46846219-46846238 | MS.gene065347:CDS | 50.0% | |
| TCTTGGCATCTCCAACAAGG+CGG | - | chr2.4:46845191-46845210 | None:intergenic | 50.0% | |
| TGGACAAGCCAACACCCATA+AGG | - | chr2.4:46846264-46846283 | None:intergenic | 50.0% | |
| ! | CATGATGGAAGTGTAGCAGC+AGG | - | chr2.4:46845111-46845130 | None:intergenic | 50.0% |
| ! | GGAGTTTGGAGCACACCTTA+TGG | + | chr2.4:46846246-46846265 | MS.gene065347:CDS | 50.0% |
| ! | TAGTAATGTGCTGCTGGACG+AGG | + | chr2.4:46846225-46846244 | MS.gene065347:CDS | 50.0% |
| ! | TGTCGGGTTTTCAGTGGACA+TGG | + | chr2.4:46844595-46844614 | MS.gene065347:CDS | 50.0% |
| !! | CCCAACATGGAGAAAGCACT+TGG | - | chr2.4:46844418-46844437 | None:intergenic | 50.0% |
| !! | GACATTCTAGGGCGCATAGA+AGG | - | chr2.4:46846631-46846650 | None:intergenic | 50.0% |
| AGCATCCCATCACAACCACC+AGG | - | chr2.4:46845347-46845366 | None:intergenic | 55.0% | |
| CATGAGAGGACTGTGATGGC+AGG | + | chr2.4:46846307-46846326 | MS.gene065347:CDS | 55.0% | |
| CCCATCACAACCACCAGGTT+TGG | - | chr2.4:46845342-46845361 | None:intergenic | 55.0% | |
| GACTGGTGGTACGTACAGTG+GGG | + | chr2.4:46845209-46845228 | MS.gene065347:CDS | 55.0% | |
| GCTTCGACATCCAAACCTGG+TGG | + | chr2.4:46845329-46845348 | MS.gene065347:CDS | 55.0% | |
| GGAGCACACCTTATGGGTGT+TGG | + | chr2.4:46846253-46846272 | MS.gene065347:CDS | 55.0% | |
| GGGAGGTCGCAGCTTAGATT+GGG | + | chr2.4:46845449-46845468 | MS.gene065347:CDS | 55.0% | |
| GGTCCAAGCTGATGGCTCAA+AGG | + | chr2.4:46845230-46845249 | MS.gene065347:CDS | 55.0% | |
| GTGATGGCAGGGGGAACTTA+TGG | + | chr2.4:46846319-46846338 | MS.gene065347:CDS | 55.0% | |
| GTTGGAGATGCCAAGACTGG+TGG | + | chr2.4:46845195-46845214 | MS.gene065347:CDS | 55.0% | |
| TACAGTGGGGTCCAAGCTGA+TGG | + | chr2.4:46845222-46845241 | MS.gene065347:CDS | 55.0% | |
| TGAGAGGACTGTGATGGCAG+GGG | + | chr2.4:46846309-46846328 | MS.gene065347:CDS | 55.0% | |
| GAGAGGACTGTGATGGCAGG+GGG | + | chr2.4:46846310-46846329 | MS.gene065347:CDS | 60.0% | |
| GGGGAGGTCGCAGCTTAGAT+TGG | + | chr2.4:46845448-46845467 | MS.gene065347:CDS | 60.0% | |
| TCTAAGCTGCGACCTCCCCT+TGG | - | chr2.4:46845447-46845466 | None:intergenic | 60.0% | |
| ! | GTGCTGCTGGACGAGGAGTT+TGG | + | chr2.4:46846232-46846251 | MS.gene065347:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.4 | gene | 46844376 | 46846699 | 46844376 | ID=MS.gene065347 |
| chr2.4 | mRNA | 46844376 | 46846699 | 46844376 | ID=MS.gene065347.t1;Parent=MS.gene065347 |
| chr2.4 | exon | 46844376 | 46844807 | 46844376 | ID=MS.gene065347.t1.exon1;Parent=MS.gene065347.t1 |
| chr2.4 | CDS | 46844376 | 46844807 | 46844376 | ID=cds.MS.gene065347.t1;Parent=MS.gene065347.t1 |
| chr2.4 | exon | 46844953 | 46845514 | 46844953 | ID=MS.gene065347.t1.exon2;Parent=MS.gene065347.t1 |
| chr2.4 | CDS | 46844953 | 46845514 | 46844953 | ID=cds.MS.gene065347.t1;Parent=MS.gene065347.t1 |
| chr2.4 | exon | 46846174 | 46846699 | 46846174 | ID=MS.gene065347.t1.exon3;Parent=MS.gene065347.t1 |
| chr2.4 | CDS | 46846174 | 46846699 | 46846174 | ID=cds.MS.gene065347.t1;Parent=MS.gene065347.t1 |
| Gene Sequence |
| Protein sequence |
