Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07311.t1 | XP_003591385.1 | 96 | 224 | 9 | 0 | 1 | 224 | 37 | 260 | 6.30E-124 | 453.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07311.t1 | Q7XA78 | 35.2 | 210 | 118 | 6 | 4 | 203 | 53 | 254 | 2.2e-29 | 130.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07311.t1 | G7ICW5 | 96.0 | 224 | 9 | 0 | 1 | 224 | 37 | 260 | 4.5e-124 | 453.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene07311 | 0.863082 | 3.21E-64 | -1.69E-46 |
| MS.gene049170 | MS.gene07311 | 0.802693 | 4.97E-49 | -1.69E-46 |
| MS.gene049171 | MS.gene07311 | 0.81788 | 2.62E-52 | -1.69E-46 |
| MS.gene049222 | MS.gene07311 | 0.833194 | 6.14E-56 | -1.69E-46 |
| MS.gene049609 | MS.gene07311 | 0.868125 | 8.23E-66 | -1.69E-46 |
| MS.gene049633 | MS.gene07311 | 0.800797 | 1.22E-48 | -1.69E-46 |
| MS.gene049805 | MS.gene07311 | 0.849664 | 2.80E-60 | -1.69E-46 |
| MS.gene050315 | MS.gene07311 | 0.843481 | 1.36E-58 | -1.69E-46 |
| MS.gene050507 | MS.gene07311 | 0.81072 | 1.00E-50 | -1.69E-46 |
| MS.gene050538 | MS.gene07311 | 0.84103 | 6.08E-58 | -1.69E-46 |
| MS.gene050593 | MS.gene07311 | 0.823572 | 1.29E-53 | -1.69E-46 |
| MS.gene050625 | MS.gene07311 | 0.805585 | 1.24E-49 | -1.69E-46 |
| MS.gene050670 | MS.gene07311 | 0.87476 | 5.25E-68 | -1.69E-46 |
| MS.gene050747 | MS.gene07311 | 0.861321 | 1.11E-63 | -1.69E-46 |
| MS.gene050772 | MS.gene07311 | 0.83274 | 7.96E-56 | -1.69E-46 |
| MS.gene05080 | MS.gene07311 | 0.843048 | 1.78E-58 | -1.69E-46 |
| MS.gene050812 | MS.gene07311 | 0.800261 | 1.57E-48 | -1.69E-46 |
| MS.gene05081 | MS.gene07311 | 0.821145 | 4.72E-53 | -1.69E-46 |
| MS.gene050950 | MS.gene07311 | 0.856788 | 2.54E-62 | -1.69E-46 |
| MS.gene05105 | MS.gene07311 | 0.875329 | 3.36E-68 | -1.69E-46 |
| MS.gene051387 | MS.gene07311 | 0.80704 | 6.14E-50 | -1.69E-46 |
| MS.gene051438 | MS.gene07311 | 0.816561 | 5.19E-52 | -1.69E-46 |
| MS.gene051525 | MS.gene07311 | 0.817581 | 3.06E-52 | -1.69E-46 |
| MS.gene051617 | MS.gene07311 | 0.808934 | 2.43E-50 | -1.69E-46 |
| MS.gene051666 | MS.gene07311 | 0.860069 | 2.67E-63 | -1.69E-46 |
| MS.gene051694 | MS.gene07311 | 0.801471 | 8.87E-49 | -1.69E-46 |
| MS.gene051838 | MS.gene07311 | 0.863863 | 1.84E-64 | -1.69E-46 |
| MS.gene051858 | MS.gene07311 | 0.808231 | 3.43E-50 | -1.69E-46 |
| MS.gene052164 | MS.gene07311 | 0.823145 | 1.62E-53 | -1.69E-46 |
| MS.gene052188 | MS.gene07311 | 0.816988 | 4.16E-52 | -1.69E-46 |
| MS.gene052253 | MS.gene07311 | 0.809985 | 1.44E-50 | -1.69E-46 |
| MS.gene052322 | MS.gene07311 | 0.800821 | 1.20E-48 | -1.69E-46 |
| MS.gene052414 | MS.gene07311 | 0.815857 | 7.46E-52 | -1.69E-46 |
| MS.gene052421 | MS.gene07311 | 0.844166 | 8.95E-59 | -1.69E-46 |
| MS.gene052469 | MS.gene07311 | 0.806792 | 6.93E-50 | -1.69E-46 |
| MS.gene052481 | MS.gene07311 | 0.820792 | 5.69E-53 | -1.69E-46 |
| MS.gene052484 | MS.gene07311 | 0.803704 | 3.07E-49 | -1.69E-46 |
| MS.gene052501 | MS.gene07311 | 0.821871 | 3.21E-53 | -1.69E-46 |
| MS.gene052505 | MS.gene07311 | 0.832677 | 8.25E-56 | -1.69E-46 |
| MS.gene052615 | MS.gene07311 | 0.842113 | 3.15E-58 | -1.69E-46 |
| MS.gene052872 | MS.gene07311 | 0.804745 | 1.86E-49 | -1.69E-46 |
| MS.gene052982 | MS.gene07311 | 0.855335 | 6.76E-62 | -1.69E-46 |
| MS.gene053203 | MS.gene07311 | 0.801828 | 7.49E-49 | -1.69E-46 |
| MS.gene053207 | MS.gene07311 | 0.842512 | 2.47E-58 | -1.69E-46 |
| MS.gene053209 | MS.gene07311 | 0.801957 | 7.05E-49 | -1.69E-46 |
| MS.gene053213 | MS.gene07311 | 0.80581 | 1.12E-49 | -1.69E-46 |
| MS.gene053322 | MS.gene07311 | 0.801986 | 6.95E-49 | -1.69E-46 |
| MS.gene053574 | MS.gene07311 | 0.833652 | 4.72E-56 | -1.69E-46 |
| MS.gene053579 | MS.gene07311 | 0.824881 | 6.35E-54 | -1.69E-46 |
| MS.gene053632 | MS.gene07311 | 0.840827 | 6.88E-58 | -1.69E-46 |
| MS.gene053824 | MS.gene07311 | 0.83334 | 5.64E-56 | -1.69E-46 |
| MS.gene053912 | MS.gene07311 | 0.80047 | 1.42E-48 | -1.69E-46 |
| MS.gene053916 | MS.gene07311 | 0.807329 | 5.33E-50 | -1.69E-46 |
| MS.gene054408 | MS.gene07311 | 0.83065 | 2.61E-55 | -1.69E-46 |
| MS.gene054600 | MS.gene07311 | 0.814437 | 1.54E-51 | -1.69E-46 |
| MS.gene05470 | MS.gene07311 | 0.802099 | 6.59E-49 | -1.69E-46 |
| MS.gene054884 | MS.gene07311 | -0.812694 | 3.73E-51 | -1.69E-46 |
| MS.gene054927 | MS.gene07311 | 0.853806 | 1.87E-61 | -1.69E-46 |
| MS.gene05494 | MS.gene07311 | 0.806448 | 8.19E-50 | -1.69E-46 |
| MS.gene05505 | MS.gene07311 | 0.832427 | 9.51E-56 | -1.69E-46 |
| MS.gene055116 | MS.gene07311 | 0.819542 | 1.10E-52 | -1.69E-46 |
| MS.gene055206 | MS.gene07311 | 0.802251 | 6.13E-49 | -1.69E-46 |
| MS.gene055224 | MS.gene07311 | 0.806377 | 8.47E-50 | -1.69E-46 |
| MS.gene055289 | MS.gene07311 | 0.82644 | 2.71E-54 | -1.69E-46 |
| MS.gene055370 | MS.gene07311 | 0.80456 | 2.04E-49 | -1.69E-46 |
| MS.gene055502 | MS.gene07311 | 0.80279 | 4.75E-49 | -1.69E-46 |
| MS.gene055539 | MS.gene07311 | 0.834923 | 2.26E-56 | -1.69E-46 |
| MS.gene055577 | MS.gene07311 | 0.846833 | 1.69E-59 | -1.69E-46 |
| MS.gene055741 | MS.gene07311 | 0.828169 | 1.04E-54 | -1.69E-46 |
| MS.gene055744 | MS.gene07311 | 0.828987 | 6.62E-55 | -1.69E-46 |
| MS.gene055941 | MS.gene07311 | 0.813081 | 3.07E-51 | -1.69E-46 |
| MS.gene05602 | MS.gene07311 | 0.800224 | 1.59E-48 | -1.69E-46 |
| MS.gene056083 | MS.gene07311 | 0.807157 | 5.80E-50 | -1.69E-46 |
| MS.gene056166 | MS.gene07311 | 0.802062 | 6.70E-49 | -1.69E-46 |
| MS.gene056659 | MS.gene07311 | 0.82433 | 8.56E-54 | -1.69E-46 |
| MS.gene056782 | MS.gene07311 | 0.81205 | 5.15E-51 | -1.69E-46 |
| MS.gene056897 | MS.gene07311 | 0.81401 | 1.92E-51 | -1.69E-46 |
| MS.gene057048 | MS.gene07311 | 0.829973 | 3.81E-55 | -1.69E-46 |
| MS.gene057076 | MS.gene07311 | 0.830788 | 2.41E-55 | -1.69E-46 |
| MS.gene057124 | MS.gene07311 | 0.869528 | 2.89E-66 | -1.69E-46 |
| MS.gene057207 | MS.gene07311 | 0.804175 | 2.45E-49 | -1.69E-46 |
| MS.gene057416 | MS.gene07311 | 0.817491 | 3.21E-52 | -1.69E-46 |
| MS.gene057440 | MS.gene07311 | -0.801831 | 7.48E-49 | -1.69E-46 |
| MS.gene057658 | MS.gene07311 | 0.845877 | 3.09E-59 | -1.69E-46 |
| MS.gene057734 | MS.gene07311 | 0.804854 | 1.77E-49 | -1.69E-46 |
| MS.gene058007 | MS.gene07311 | 0.822533 | 2.25E-53 | -1.69E-46 |
| MS.gene058082 | MS.gene07311 | 0.805479 | 1.31E-49 | -1.69E-46 |
| MS.gene058120 | MS.gene07311 | 0.802903 | 4.50E-49 | -1.69E-46 |
| MS.gene058130 | MS.gene07311 | 0.859968 | 2.87E-63 | -1.69E-46 |
| MS.gene058233 | MS.gene07311 | 0.80997 | 1.45E-50 | -1.69E-46 |
| MS.gene058376 | MS.gene07311 | 0.818714 | 1.70E-52 | -1.69E-46 |
| MS.gene05837 | MS.gene07311 | 0.838145 | 3.42E-57 | -1.69E-46 |
| MS.gene058419 | MS.gene07311 | 0.809357 | 1.97E-50 | -1.69E-46 |
| MS.gene058444 | MS.gene07311 | 0.831807 | 1.35E-55 | -1.69E-46 |
| MS.gene058544 | MS.gene07311 | 0.824921 | 6.21E-54 | -1.69E-46 |
| MS.gene058700 | MS.gene07311 | 0.840127 | 1.05E-57 | -1.69E-46 |
| MS.gene058723 | MS.gene07311 | 0.820937 | 5.27E-53 | -1.69E-46 |
| MS.gene058748 | MS.gene07311 | 0.809366 | 1.96E-50 | -1.69E-46 |
| MS.gene058838 | MS.gene07311 | 0.839942 | 1.17E-57 | -1.69E-46 |
| MS.gene058948 | MS.gene07311 | 0.825427 | 4.72E-54 | -1.69E-46 |
| MS.gene059023 | MS.gene07311 | 0.845399 | 4.16E-59 | -1.69E-46 |
| MS.gene05914 | MS.gene07311 | 0.820633 | 6.19E-53 | -1.69E-46 |
| MS.gene05934 | MS.gene07311 | 0.833137 | 6.34E-56 | -1.69E-46 |
| MS.gene059536 | MS.gene07311 | 0.816892 | 4.38E-52 | -1.69E-46 |
| MS.gene059667 | MS.gene07311 | 0.815982 | 6.99E-52 | -1.69E-46 |
| MS.gene059677 | MS.gene07311 | 0.803547 | 3.31E-49 | -1.69E-46 |
| MS.gene059688 | MS.gene07311 | 0.844873 | 5.77E-59 | -1.69E-46 |
| MS.gene059692 | MS.gene07311 | 0.830286 | 3.20E-55 | -1.69E-46 |
| MS.gene059695 | MS.gene07311 | 0.83553 | 1.59E-56 | -1.69E-46 |
| MS.gene059718 | MS.gene07311 | 0.838909 | 2.17E-57 | -1.69E-46 |
| MS.gene059902 | MS.gene07311 | 0.803138 | 4.02E-49 | -1.69E-46 |
| MS.gene060403 | MS.gene07311 | 0.803756 | 2.99E-49 | -1.69E-46 |
| MS.gene060762 | MS.gene07311 | 0.804593 | 2.01E-49 | -1.69E-46 |
| MS.gene060835 | MS.gene07311 | 0.83445 | 2.98E-56 | -1.69E-46 |
| MS.gene060837 | MS.gene07311 | 0.800727 | 1.26E-48 | -1.69E-46 |
| MS.gene06092 | MS.gene07311 | 0.875498 | 2.94E-68 | -1.69E-46 |
| MS.gene061150 | MS.gene07311 | 0.82021 | 7.74E-53 | -1.69E-46 |
| MS.gene061154 | MS.gene07311 | 0.81696 | 4.22E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07311.t1 | MTR_1g086840 | 95.982 | 224 | 9 | 0 | 1 | 224 | 37 | 260 | 9.91e-163 | 449 |
| MS.gene07311.t1 | MTR_1g086840 | 84.409 | 186 | 26 | 2 | 1 | 185 | 37 | 220 | 3.12e-110 | 315 |
| MS.gene07311.t1 | MTR_7g095920 | 36.181 | 199 | 120 | 4 | 6 | 203 | 45 | 237 | 8.61e-38 | 132 |
| MS.gene07311.t1 | MTR_1g471050 | 36.082 | 194 | 117 | 4 | 11 | 203 | 53 | 240 | 7.91e-36 | 127 |
| MS.gene07311.t1 | MTR_3g080840 | 32.906 | 234 | 128 | 7 | 6 | 223 | 43 | 263 | 4.78e-35 | 125 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07311.t1 | AT4G01995 | 68.900 | 209 | 63 | 1 | 5 | 213 | 46 | 252 | 1.25e-100 | 293 |
| MS.gene07311.t1 | AT4G01995 | 68.900 | 209 | 63 | 1 | 5 | 213 | 15 | 221 | 1.46e-100 | 291 |
| MS.gene07311.t1 | AT4G01995 | 65.625 | 128 | 44 | 0 | 5 | 132 | 46 | 173 | 1.32e-51 | 166 |
| MS.gene07311.t1 | AT1G64680 | 36.098 | 205 | 110 | 6 | 8 | 200 | 36 | 231 | 2.64e-39 | 136 |
| MS.gene07311.t1 | AT1G03055 | 35.071 | 211 | 119 | 6 | 3 | 203 | 52 | 254 | 1.43e-36 | 129 |
| MS.gene07311.t1 | AT1G64680 | 34.463 | 177 | 95 | 6 | 8 | 172 | 36 | 203 | 1.61e-28 | 107 |
Find 74 sgRNAs with CRISPR-Local
Find 165 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGCAGTCACACCTGTGTTTC+TGG | 0.163795 | 1.4:-69229940 | None:intergenic |
| CAATTTGTTTCGCACCAAAT+TGG | 0.279978 | 1.4:+69227772 | MS.gene07311:CDS |
| TTTGTTTCCTCCATTCCTTT+TGG | 0.289746 | 1.4:+69228917 | MS.gene07311:CDS |
| GAAAATTACCGTAGCTTCTA+TGG | 0.292895 | 1.4:-69228006 | None:intergenic |
| TTAGGTTACCTGAACCAATT+TGG | 0.303056 | 1.4:-69227786 | None:intergenic |
| TTCAGGACGGTGTCATCTTC+AGG | 0.308272 | 1.4:-69229867 | None:intergenic |
| GACCTTCTTCAAGGATCATA+TGG | 0.328100 | 1.4:+69229680 | MS.gene07311:intron |
| TTAAATTTGCAGTTCAAATT+CGG | 0.342169 | 1.4:+69229828 | MS.gene07311:intron |
| AACCTGTGTTGGAAACTTAC+AGG | 0.345038 | 1.4:-69229362 | None:intergenic |
| GTCTACAGAATTGACTTTGC+AGG | 0.348660 | 1.4:-69229154 | None:intergenic |
| GTTTCGCACCAAATTGGTTC+AGG | 0.358197 | 1.4:+69227778 | MS.gene07311:CDS |
| TGTCGAAAGATGCAAGTATC+TGG | 0.367315 | 1.4:+69229306 | MS.gene07311:CDS |
| AAATGCTTCCCTACGAAGAT+TGG | 0.373694 | 1.4:+69229914 | MS.gene07311:CDS |
| CTTCCAAGCAAGGCTCCTTC+AGG | 0.383691 | 1.4:-69229884 | None:intergenic |
| TTAAATTTAGACCTTCTTCA+AGG | 0.416665 | 1.4:+69229671 | MS.gene07311:intron |
| GCAACTTTGCCTCCACCTAT+AGG | 0.420034 | 1.4:-69228963 | None:intergenic |
| ACAGCTATAATCAGCAAAGT+TGG | 0.429629 | 1.4:-69229724 | None:intergenic |
| TCAAAGAGTGAATACAAGCC+TGG | 0.439154 | 1.4:+69227728 | MS.gene07311:CDS |
| AGGCAAAGTTGCCGCTATAA+TGG | 0.445748 | 1.4:+69228974 | MS.gene07311:CDS |
| AATCTTCGTAGGGAAGCATT+TGG | 0.450960 | 1.4:-69229912 | None:intergenic |
| CTTTGCTGATTATAGCTGTC+AGG | 0.455452 | 1.4:+69229728 | MS.gene07311:CDS |
| CGTCCTGAAGGAGCCTTGCT+TGG | 0.459856 | 1.4:+69229881 | MS.gene07311:CDS |
| TCAATTAGTCCGTCATATCC+AGG | 0.477685 | 1.4:-69227939 | None:intergenic |
| AAAATGCTCATAGCTCCTAT+AGG | 0.484909 | 1.4:+69228948 | MS.gene07311:CDS |
| GATGGAACCTCATGGAATAG+TGG | 0.485415 | 1.4:+69229183 | MS.gene07311:CDS |
| TTACTGCACTTACTTGTCAA+TGG | 0.489234 | 1.4:+69229121 | MS.gene07311:CDS |
| ACCTTCTTCAAGGATCATAT+GGG | 0.499420 | 1.4:+69229681 | MS.gene07311:CDS |
| CAGCTATAATCAGCAAAGTT+GGG | 0.500940 | 1.4:-69229723 | None:intergenic |
| CGGTGTCATCTTCAGGAAGT+GGG | 0.502536 | 1.4:-69229860 | None:intergenic |
| TACCGTAGCTTCTATGGTAT+CGG | 0.506593 | 1.4:-69228000 | None:intergenic |
| ATGGAACCTCATGGAATAGT+GGG | 0.508469 | 1.4:+69229184 | MS.gene07311:CDS |
| GGATGGGACTCGAAGAAACC+TGG | 0.509195 | 1.4:+69227921 | MS.gene07311:CDS |
| CAAAGAGTGAATACAAGCCT+GGG | 0.509583 | 1.4:+69227729 | MS.gene07311:CDS |
| ACGGTGTCATCTTCAGGAAG+TGG | 0.512090 | 1.4:-69229861 | None:intergenic |
| TTTGGACATGCTTCCAAGCA+AGG | 0.516931 | 1.4:-69229894 | None:intergenic |
| ATATGTTCATGTCTTTGGGC+AGG | 0.520060 | 1.4:-69229961 | None:intergenic |
| GAAGAATCACTAACCTGTGT+TGG | 0.521242 | 1.4:-69229373 | None:intergenic |
| ACTTACTTGTCAATGGCTCA+TGG | 0.525178 | 1.4:+69229128 | MS.gene07311:CDS |
| TCTACAGAATTGACTTTGCA+GGG | 0.526670 | 1.4:-69229153 | None:intergenic |
| CTTACTTGTCAATGGCTCAT+GGG | 0.539633 | 1.4:+69229129 | MS.gene07311:CDS |
| CTCCGATACCATAGAAGCTA+CGG | 0.540098 | 1.4:+69227998 | MS.gene07311:CDS |
| TATGGGAGTTCCATTACTCA+TGG | 0.540166 | 1.4:+69229698 | MS.gene07311:CDS |
| TACTATAACAGGAAGTGGGA+TGG | 0.548952 | 1.4:+69227904 | MS.gene07311:intron |
| TTATAGAGCTCCAAAAGGAA+TGG | 0.549533 | 1.4:-69228927 | None:intergenic |
| ATTTGGTGCGAAACAAATTG+AGG | 0.552877 | 1.4:-69227769 | None:intergenic |
| TCCCATATGATCCTTGAAGA+AGG | 0.562632 | 1.4:-69229682 | None:intergenic |
| CTCATAGCTCCTATAGGTGG+AGG | 0.565279 | 1.4:+69228954 | MS.gene07311:CDS |
| TAGTGCCTTTCATCATTAGA+CGG | 0.569097 | 1.4:-69227971 | None:intergenic |
| AAAATACTATAACAGGAAGT+GGG | 0.571265 | 1.4:+69227900 | MS.gene07311:intron |
| AAGTTGGGCTCCATGAGTAA+TGG | 0.572536 | 1.4:-69229708 | None:intergenic |
| TCGAAGAAACCTGGATATGA+CGG | 0.573061 | 1.4:+69227930 | MS.gene07311:CDS |
| ACTATAACAGGAAGTGGGAT+GGG | 0.573427 | 1.4:+69227905 | MS.gene07311:intron |
| TGAAGATGACACCGTCCTGA+AGG | 0.575565 | 1.4:+69229869 | MS.gene07311:CDS |
| TCTGGAAGCCAATCTTCGTA+GGG | 0.579827 | 1.4:-69229922 | None:intergenic |
| ACCTATCAGATGGAACCTCA+TGG | 0.586052 | 1.4:+69229175 | MS.gene07311:CDS |
| AACAAATCATCAATAACCCC+AGG | 0.586570 | 1.4:-69227746 | None:intergenic |
| TCCATGAGGTTCCATCTGAT+AGG | 0.590896 | 1.4:-69229176 | None:intergenic |
| CACCTGTAAGTTTCCAACAC+AGG | 0.597620 | 1.4:+69229360 | MS.gene07311:CDS |
| TTCTGGAAGCCAATCTTCGT+AGG | 0.598210 | 1.4:-69229923 | None:intergenic |
| AAAGTTGCCGCTATAATGGT+TGG | 0.601706 | 1.4:+69228978 | MS.gene07311:CDS |
| CTGGAGGAAAGCAAGTGTGT+TGG | 0.610904 | 1.4:+69229325 | MS.gene07311:CDS |
| AATTCTGTAGACCTATCAGA+TGG | 0.614406 | 1.4:+69229165 | MS.gene07311:CDS |
| TAGAGCTCCAAAAGGAATGG+AGG | 0.615600 | 1.4:-69228924 | None:intergenic |
| GCTAACCGTCTAATGATGAA+AGG | 0.626704 | 1.4:+69227966 | MS.gene07311:CDS |
| ATGCTCATAGCTCCTATAGG+TGG | 0.633669 | 1.4:+69228951 | MS.gene07311:CDS |
| CGAAAGATGCAAGTATCTGG+AGG | 0.640761 | 1.4:+69229309 | MS.gene07311:CDS |
| GGTGTCATCTTCAGGAAGTG+GGG | 0.642463 | 1.4:-69229859 | None:intergenic |
| CAAGCAAGGCTCCTTCAGGA+CGG | 0.652728 | 1.4:-69229880 | None:intergenic |
| GTGTCATCTTCAGGAAGTGG+GGG | 0.656581 | 1.4:-69229858 | None:intergenic |
| AGATTGGCTTCCAGAAACAC+AGG | 0.677702 | 1.4:+69229930 | MS.gene07311:CDS |
| AGACTCACCAACCATTATAG+CGG | 0.701172 | 1.4:-69228985 | None:intergenic |
| TGGAACCTCATGGAATAGTG+GGG | 0.705163 | 1.4:+69229185 | MS.gene07311:CDS |
| AAAGAGTGAATACAAGCCTG+GGG | 0.716715 | 1.4:+69227730 | MS.gene07311:CDS |
| GATCACCCCACTATTCCATG+AGG | 0.750720 | 1.4:-69229190 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAACTTAAATAAATGTTTA+AGG | - | chr1.4:69229091-69229110 | None:intergenic | 10.0% |
| !! | ATATATGAATATGATTAATG+TGG | + | chr1.4:69227861-69227880 | MS.gene07311:intron | 15.0% |
| !! | AAAGCTATAAATAAGTTAAC+TGG | - | chr1.4:69227821-69227840 | None:intergenic | 20.0% |
| !! | AAATATTACGTATTCTCTTA+TGG | + | chr1.4:69229755-69229774 | MS.gene07311:intron | 20.0% |
| !! | AAATCCTAAGATGATAAAAA+TGG | + | chr1.4:69228450-69228469 | MS.gene07311:intron | 20.0% |
| !! | AAGTTTAGAAGAATCATATA+AGG | - | chr1.4:69228828-69228847 | None:intergenic | 20.0% |
| !! | AGATTATCAAACTGTTTATA+AGG | + | chr1.4:69228215-69228234 | MS.gene07311:intron | 20.0% |
| !! | ATTTGAACTGCAAATTTAAA+AGG | - | chr1.4:69229827-69229846 | None:intergenic | 20.0% |
| !! | GAATAAGTAACATTGTATTA+CGG | - | chr1.4:69228730-69228749 | None:intergenic | 20.0% |
| !! | TATAAATAAGTTAACTGGAA+GGG | - | chr1.4:69227816-69227835 | None:intergenic | 20.0% |
| !! | TATGTACTATAAAATGTTGT+AGG | + | chr1.4:69229279-69229298 | MS.gene07311:intron | 20.0% |
| !! | TTAAATTTGCAGTTCAAATT+CGG | + | chr1.4:69229828-69229847 | MS.gene07311:intron | 20.0% |
| !!! | AGATAAGAATTTGATGTTTT+TGG | + | chr1.4:69228512-69228531 | MS.gene07311:intron | 20.0% |
| !!! | ATAAGAATTTGATGTTTTTG+GGG | + | chr1.4:69228514-69228533 | MS.gene07311:intron | 20.0% |
| !!! | GATAAGAATTTGATGTTTTT+GGG | + | chr1.4:69228513-69228532 | MS.gene07311:intron | 20.0% |
| !!! | TAATACAATGTTACTTATTC+TGG | + | chr1.4:69228730-69228749 | MS.gene07311:intron | 20.0% |
| !!! | TTATTTAAGTTTTGAAGCAA+GGG | + | chr1.4:69229098-69229117 | MS.gene07311:intron | 20.0% |
| !!! | TTTATTTAAGTTTTGAAGCA+AGG | + | chr1.4:69229097-69229116 | MS.gene07311:intron | 20.0% |
| !!! | TTTTAGAAAGAAAGAAAAGA+GGG | + | chr1.4:69227838-69227857 | MS.gene07311:intron | 20.0% |
| ! | AAAATACTATAACAGGAAGT+GGG | + | chr1.4:69227900-69227919 | MS.gene07311:intron | 25.0% |
| ! | ATAAATAAGTTAACTGGAAG+GGG | - | chr1.4:69227815-69227834 | None:intergenic | 25.0% |
| ! | ATACTAACATGAAAAAACCA+AGG | - | chr1.4:69229583-69229602 | None:intergenic | 25.0% |
| ! | ATGAATATGATTAATGTGGT+GGG | + | chr1.4:69227865-69227884 | MS.gene07311:intron | 25.0% |
| ! | CTATAAATAAGTTAACTGGA+AGG | - | chr1.4:69227817-69227836 | None:intergenic | 25.0% |
| ! | GAGTATGAAAATACTATAAC+AGG | + | chr1.4:69227893-69227912 | MS.gene07311:intron | 25.0% |
| ! | GAGTTCAAATTTATATGATG+AGG | + | chr1.4:69229777-69229796 | MS.gene07311:intron | 25.0% |
| ! | TACTAACATGAAAAAACCAA+GGG | - | chr1.4:69229582-69229601 | None:intergenic | 25.0% |
| ! | TAGTTATCTTTGCGAAAAAA+TGG | + | chr1.4:69228629-69228648 | MS.gene07311:intron | 25.0% |
| ! | TATGAATATGATTAATGTGG+TGG | + | chr1.4:69227864-69227883 | MS.gene07311:intron | 25.0% |
| ! | TCATCTTGTATTATTGAAAG+TGG | + | chr1.4:69229254-69229273 | MS.gene07311:intron | 25.0% |
| ! | TGATTCTTCTAAACTTTGAA+TGG | + | chr1.4:69228832-69228851 | MS.gene07311:intron | 25.0% |
| ! | TTAAATTTAGACCTTCTTCA+AGG | + | chr1.4:69229671-69229690 | MS.gene07311:intron | 25.0% |
| !! | TAAATTTTGTGTGACTGTTT+AGG | + | chr1.4:69228177-69228196 | MS.gene07311:intron | 25.0% |
| !!! | ATATAAACCTTTTGAAACCA+TGG | - | chr1.4:69228099-69228118 | None:intergenic | 25.0% |
| !!! | CTTTTAGAAAGAAAGAAAAG+AGG | + | chr1.4:69227837-69227856 | MS.gene07311:intron | 25.0% |
| !!! | GTTTCCATTTTTATCATCTT+AGG | - | chr1.4:69228457-69228476 | None:intergenic | 25.0% |
| !!! | TTTGAAGTTGTTGCATTTTA+TGG | + | chr1.4:69229627-69229646 | MS.gene07311:intron | 25.0% |
| AGCTTTACTTTCTCTTTCTA+AGG | - | chr1.4:69228406-69228425 | None:intergenic | 30.0% | |
| GAAAATACTATAACAGGAAG+TGG | + | chr1.4:69227899-69227918 | MS.gene07311:intron | 30.0% | |
| TCAGTTAAAGACAAATCGTT+TGG | - | chr1.4:69229534-69229553 | None:intergenic | 30.0% | |
| ! | AAGTTGTTGCATTTTATGGA+TGG | + | chr1.4:69229631-69229650 | MS.gene07311:intron | 30.0% |
| ! | GAAAGAGAAAGTAAAGCTTT+TGG | + | chr1.4:69228408-69228427 | MS.gene07311:intron | 30.0% |
| !! | TGAAGTGGATTGGAATAAAA+CGG | - | chr1.4:69228678-69228697 | None:intergenic | 30.0% |
| AAAATGCTCATAGCTCCTAT+AGG | + | chr1.4:69228948-69228967 | MS.gene07311:CDS | 35.0% | |
| AAATGCAACAACTTCAAAGC+TGG | - | chr1.4:69229625-69229644 | None:intergenic | 35.0% | |
| AACAAATCATCAATAACCCC+AGG | - | chr1.4:69227749-69227768 | None:intergenic | 35.0% | |
| AACTCTCAAAACCAAAATGG+TGG | - | chr1.4:69228557-69228576 | None:intergenic | 35.0% | |
| AATTCTGTAGACCTATCAGA+TGG | + | chr1.4:69229165-69229184 | MS.gene07311:CDS | 35.0% | |
| ACAGCTATAATCAGCAAAGT+TGG | - | chr1.4:69229727-69229746 | None:intergenic | 35.0% | |
| ACATGAAAAAACCAAGGGAT+CGG | - | chr1.4:69229577-69229596 | None:intergenic | 35.0% | |
| ACATTGTATTACGGTATGTC+TGG | - | chr1.4:69228721-69228740 | None:intergenic | 35.0% | |
| ACCAAAACCATGGTTTCAAA+AGG | + | chr1.4:69228089-69228108 | MS.gene07311:intron | 35.0% | |
| ACCTTCTTCAAGGATCATAT+GGG | + | chr1.4:69229681-69229700 | MS.gene07311:CDS | 35.0% | |
| CAGCTATAATCAGCAAAGTT+GGG | - | chr1.4:69229726-69229745 | None:intergenic | 35.0% | |
| CCAAACTCTCAAAACCAAAA+TGG | - | chr1.4:69228560-69228579 | None:intergenic | 35.0% | |
| GAAAATTACCGTAGCTTCTA+TGG | - | chr1.4:69228009-69228028 | None:intergenic | 35.0% | |
| GGTATAGATCAGGTATGTTT+GGG | + | chr1.4:69228578-69228597 | MS.gene07311:intron | 35.0% | |
| TAGAGTTGAATGAAGTGGAT+TGG | - | chr1.4:69228688-69228707 | None:intergenic | 35.0% | |
| TAGTGCCTTTCATCATTAGA+CGG | - | chr1.4:69227974-69227993 | None:intergenic | 35.0% | |
| TCATAATAAGCACTTGTGAG+CGG | + | chr1.4:69228359-69228378 | MS.gene07311:intron | 35.0% | |
| TGGTATAGAGTTGAATGAAG+TGG | - | chr1.4:69228693-69228712 | None:intergenic | 35.0% | |
| TGGTATAGATCAGGTATGTT+TGG | + | chr1.4:69228577-69228596 | MS.gene07311:intron | 35.0% | |
| TTACTGCACTTACTTGTCAA+TGG | + | chr1.4:69229121-69229140 | MS.gene07311:CDS | 35.0% | |
| TTAGGTTACCTGAACCAATT+TGG | - | chr1.4:69227789-69227808 | None:intergenic | 35.0% | |
| TTATAGAGCTCCAAAAGGAA+TGG | - | chr1.4:69228930-69228949 | None:intergenic | 35.0% | |
| TTCCTTACAAACCAAAACCA+TGG | + | chr1.4:69228079-69228098 | MS.gene07311:intron | 35.0% | |
| TTGAGAGTTTGGTATAGATC+AGG | + | chr1.4:69228568-69228587 | MS.gene07311:intron | 35.0% | |
| TTTCAGTCAGGATTTGAACT+CGG | + | chr1.4:69229502-69229521 | MS.gene07311:intron | 35.0% | |
| ! | AATATGATTAATGTGGTGGG+TGG | + | chr1.4:69227868-69227887 | MS.gene07311:intron | 35.0% |
| ! | CAATTTGTTTCGCACCAAAT+TGG | + | chr1.4:69227772-69227791 | MS.gene07311:CDS | 35.0% |
| ! | GCATTTTATAGAGCTCCAAA+AGG | - | chr1.4:69228935-69228954 | None:intergenic | 35.0% |
| ! | TAGCACTTATGTCTTGTTAC+AGG | + | chr1.4:69228878-69228897 | MS.gene07311:intron | 35.0% |
| ! | TCTACAGAATTGACTTTGCA+GGG | - | chr1.4:69229156-69229175 | None:intergenic | 35.0% |
| ! | TGTTACAGGTACGAATTTTG+AGG | + | chr1.4:69228892-69228911 | MS.gene07311:intron | 35.0% |
| ! | TTTGTTTCCTCCATTCCTTT+TGG | + | chr1.4:69228917-69228936 | MS.gene07311:CDS | 35.0% |
| !! | AGCTGTTTTCATAAGCTATC+TGG | - | chr1.4:69228268-69228287 | None:intergenic | 35.0% |
| !! | ATTTGGTGCGAAACAAATTG+AGG | - | chr1.4:69227772-69227791 | None:intergenic | 35.0% |
| !!! | AACCATGGTTTTGGTTTGTA+AGG | - | chr1.4:69228084-69228103 | None:intergenic | 35.0% |
| !!! | ACCTTTTGAAACCATGGTTT+TGG | - | chr1.4:69228093-69228112 | None:intergenic | 35.0% |
| !!! | CCATTTTGGTTTTGAGAGTT+TGG | + | chr1.4:69228557-69228576 | MS.gene07311:intron | 35.0% |
| !!! | GAATTTGATGTTTTTGGGGA+TGG | + | chr1.4:69228518-69228537 | MS.gene07311:intron | 35.0% |
| AAAGAGTGAATACAAGCCTG+GGG | + | chr1.4:69227730-69227749 | MS.gene07311:CDS | 40.0% | |
| AAAGTTGCCGCTATAATGGT+TGG | + | chr1.4:69228978-69228997 | MS.gene07311:CDS | 40.0% | |
| AAATGCTTCCCTACGAAGAT+TGG | + | chr1.4:69229914-69229933 | MS.gene07311:CDS | 40.0% | |
| AACCTGTGTTGGAAACTTAC+AGG | - | chr1.4:69229365-69229384 | None:intergenic | 40.0% | |
| ACTATAACAGGAAGTGGGAT+GGG | + | chr1.4:69227905-69227924 | MS.gene07311:intron | 40.0% | |
| ACTTACTTGTCAATGGCTCA+TGG | + | chr1.4:69229128-69229147 | MS.gene07311:CDS | 40.0% | |
| AGACTCACCAACCATTATAG+CGG | - | chr1.4:69228988-69229007 | None:intergenic | 40.0% | |
| AGTCATAAACACACAGCGAA+AGG | - | chr1.4:69229223-69229242 | None:intergenic | 40.0% | |
| ATCCTGACTGAAACAATCAC+TGG | - | chr1.4:69229495-69229514 | None:intergenic | 40.0% | |
| ATGGAACCTCATGGAATAGT+GGG | + | chr1.4:69229184-69229203 | MS.gene07311:CDS | 40.0% | |
| CAAAGAGTGAATACAAGCCT+GGG | + | chr1.4:69227729-69227748 | MS.gene07311:CDS | 40.0% | |
| CTTACTTGTCAATGGCTCAT+GGG | + | chr1.4:69229129-69229148 | MS.gene07311:CDS | 40.0% | |
| GAAGAATCACTAACCTGTGT+TGG | - | chr1.4:69229376-69229395 | None:intergenic | 40.0% | |
| GACCGAGGGTAACAAAATTA+TGG | + | chr1.4:69229469-69229488 | MS.gene07311:intron | 40.0% | |
| GACCTTCTTCAAGGATCATA+TGG | + | chr1.4:69229680-69229699 | MS.gene07311:intron | 40.0% | |
| GCTAACCGTCTAATGATGAA+AGG | + | chr1.4:69227966-69227985 | MS.gene07311:CDS | 40.0% | |
| GGTGTATGTGTATCCAAACA+GGG | + | chr1.4:69228380-69228399 | MS.gene07311:intron | 40.0% | |
| TACCGTAGCTTCTATGGTAT+CGG | - | chr1.4:69228003-69228022 | None:intergenic | 40.0% | |
| TACTATAACAGGAAGTGGGA+TGG | + | chr1.4:69227904-69227923 | MS.gene07311:intron | 40.0% | |
| TAGATCAGGTATGTTTGGGT+TGG | + | chr1.4:69228582-69228601 | MS.gene07311:intron | 40.0% | |
| TATGGGAGTTCCATTACTCA+TGG | + | chr1.4:69229698-69229717 | MS.gene07311:CDS | 40.0% | |
| TCAAAGAGTGAATACAAGCC+TGG | + | chr1.4:69227728-69227747 | MS.gene07311:CDS | 40.0% | |
| TCAATTAGTCCGTCATATCC+AGG | - | chr1.4:69227942-69227961 | None:intergenic | 40.0% | |
| TCCCATATGATCCTTGAAGA+AGG | - | chr1.4:69229685-69229704 | None:intergenic | 40.0% | |
| TCGAAGAAACCTGGATATGA+CGG | + | chr1.4:69227930-69227949 | MS.gene07311:CDS | 40.0% | |
| TGTCGAAAGATGCAAGTATC+TGG | + | chr1.4:69229306-69229325 | MS.gene07311:CDS | 40.0% | |
| ! | AAGTGCTAACAAACTTGCTC+TGG | - | chr1.4:69228866-69228885 | None:intergenic | 40.0% |
| ! | CTTTGCTGATTATAGCTGTC+AGG | + | chr1.4:69229728-69229747 | MS.gene07311:CDS | 40.0% |
| ! | GATATCTAGAGTTTGACCGA+GGG | + | chr1.4:69229455-69229474 | MS.gene07311:intron | 40.0% |
| ! | GGCCATAATTTTGTTACCCT+CGG | - | chr1.4:69229474-69229493 | None:intergenic | 40.0% |
| ! | GTCTACAGAATTGACTTTGC+AGG | - | chr1.4:69229157-69229176 | None:intergenic | 40.0% |
| ! | TTACGGTATGTCTGGAATTG+TGG | - | chr1.4:69228713-69228732 | None:intergenic | 40.0% |
| !! | AATCTTCGTAGGGAAGCATT+TGG | - | chr1.4:69229915-69229934 | None:intergenic | 40.0% |
| !! | TCACTAGCTTGTTACGTTCA+GGG | - | chr1.4:69229054-69229073 | None:intergenic | 40.0% |
| !!! | TTGATGTTTTTGGGGATGGA+TGG | + | chr1.4:69228522-69228541 | MS.gene07311:intron | 40.0% |
| AACATTTGAGTCCGATCCCT+TGG | + | chr1.4:69229563-69229582 | MS.gene07311:intron | 45.0% | |
| AAGTTGGGCTCCATGAGTAA+TGG | - | chr1.4:69229711-69229730 | None:intergenic | 45.0% | |
| ACCTATCAGATGGAACCTCA+TGG | + | chr1.4:69229175-69229194 | MS.gene07311:CDS | 45.0% | |
| AGGCAAAGTTGCCGCTATAA+TGG | + | chr1.4:69228974-69228993 | MS.gene07311:CDS | 45.0% | |
| ATATCCCTTCCCATGAGAAC+TGG | - | chr1.4:69229440-69229459 | None:intergenic | 45.0% | |
| ATGCTCATAGCTCCTATAGG+TGG | + | chr1.4:69228951-69228970 | MS.gene07311:CDS | 45.0% | |
| CACCTGTAAGTTTCCAACAC+AGG | + | chr1.4:69229360-69229379 | MS.gene07311:CDS | 45.0% | |
| CGAAAGATGCAAGTATCTGG+AGG | + | chr1.4:69229309-69229328 | MS.gene07311:CDS | 45.0% | |
| CGGTGTATGTGTATCCAAAC+AGG | + | chr1.4:69228379-69228398 | MS.gene07311:intron | 45.0% | |
| CTCCGATACCATAGAAGCTA+CGG | + | chr1.4:69227998-69228017 | MS.gene07311:CDS | 45.0% | |
| GATGGAACCTCATGGAATAG+TGG | + | chr1.4:69229183-69229202 | MS.gene07311:CDS | 45.0% | |
| TAGAGCTCCAAAAGGAATGG+AGG | - | chr1.4:69228927-69228946 | None:intergenic | 45.0% | |
| TCCATGAGGTTCCATCTGAT+AGG | - | chr1.4:69229179-69229198 | None:intergenic | 45.0% | |
| TCTGGAAGCCAATCTTCGTA+GGG | - | chr1.4:69229925-69229944 | None:intergenic | 45.0% | |
| TGGAACCTCATGGAATAGTG+GGG | + | chr1.4:69229185-69229204 | MS.gene07311:CDS | 45.0% | |
| TTTGGACATGCTTCCAAGCA+AGG | - | chr1.4:69229897-69229916 | None:intergenic | 45.0% | |
| ! | GGATATCTAGAGTTTGACCG+AGG | + | chr1.4:69229454-69229473 | MS.gene07311:intron | 45.0% |
| ! | GGCAAAGATCTCCACCATTT+TGG | + | chr1.4:69228543-69228562 | MS.gene07311:intron | 45.0% |
| ! | GTTTCGCACCAAATTGGTTC+AGG | + | chr1.4:69227778-69227797 | MS.gene07311:CDS | 45.0% |
| ! | TTCTGGAAGCCAATCTTCGT+AGG | - | chr1.4:69229926-69229945 | None:intergenic | 45.0% |
| !! | AGATTGGCTTCCAGAAACAC+AGG | + | chr1.4:69229930-69229949 | MS.gene07311:CDS | 45.0% |
| !! | ATCAGGTATGTTTGGGTTGG+TGG | + | chr1.4:69228585-69228604 | MS.gene07311:intron | 45.0% |
| !! | CACTAGCTTGTTACGTTCAG+GGG | - | chr1.4:69229053-69229072 | None:intergenic | 45.0% |
| !! | CTCACTAGCTTGTTACGTTC+AGG | - | chr1.4:69229055-69229074 | None:intergenic | 45.0% |
| !! | TCTCTTTCTAAGGCCCTGTT+TGG | - | chr1.4:69228396-69228415 | None:intergenic | 45.0% |
| CTCATAGCTCCTATAGGTGG+AGG | + | chr1.4:69228954-69228973 | MS.gene07311:CDS | 50.0% | |
| CTGGAGGAAAGCAAGTGTGT+TGG | + | chr1.4:69229325-69229344 | MS.gene07311:CDS | 50.0% | |
| CTTAAGCCGCCAGTTCTCAT+GGG | + | chr1.4:69229428-69229447 | MS.gene07311:intron | 50.0% | |
| GATCACCCCACTATTCCATG+AGG | - | chr1.4:69229193-69229212 | None:intergenic | 50.0% | |
| GCAACTTTGCCTCCACCTAT+AGG | - | chr1.4:69228966-69228985 | None:intergenic | 50.0% | |
| GGCCAGTGATTGTTTCAGTC+AGG | + | chr1.4:69229490-69229509 | MS.gene07311:intron | 50.0% | |
| GTGTCATCTTCAGGAAGTGG+GGG | - | chr1.4:69229861-69229880 | None:intergenic | 50.0% | |
| GTTAACTGGAAGGGGCTGTT+AGG | - | chr1.4:69227807-69227826 | None:intergenic | 50.0% | |
| TCTTAAGCCGCCAGTTCTCA+TGG | + | chr1.4:69229427-69229446 | MS.gene07311:intron | 50.0% | |
| TGAAGATGACACCGTCCTGA+AGG | + | chr1.4:69229869-69229888 | MS.gene07311:CDS | 50.0% | |
| ! | GGTGTCATCTTCAGGAAGTG+GGG | - | chr1.4:69229862-69229881 | None:intergenic | 50.0% |
| !! | ACGGTGTCATCTTCAGGAAG+TGG | - | chr1.4:69229864-69229883 | None:intergenic | 50.0% |
| !! | CGGTGTCATCTTCAGGAAGT+GGG | - | chr1.4:69229863-69229882 | None:intergenic | 50.0% |
| !! | TTCAGGACGGTGTCATCTTC+AGG | - | chr1.4:69229870-69229889 | None:intergenic | 50.0% |
| CAAGCAAGGCTCCTTCAGGA+CGG | - | chr1.4:69229883-69229902 | None:intergenic | 55.0% | |
| CTTCCAAGCAAGGCTCCTTC+AGG | - | chr1.4:69229887-69229906 | None:intergenic | 55.0% | |
| GGATGGGACTCGAAGAAACC+TGG | + | chr1.4:69227921-69227940 | MS.gene07311:CDS | 55.0% | |
| GGCAGTCACACCTGTGTTTC+TGG | - | chr1.4:69229943-69229962 | None:intergenic | 55.0% | |
| TCCCTTCCCATGAGAACTGG+CGG | - | chr1.4:69229437-69229456 | None:intergenic | 55.0% | |
| !! | GGTTGGTGGCTAGAGTGGAA+TGG | + | chr1.4:69228599-69228618 | MS.gene07311:intron | 55.0% |
| !! | GTTTGGGTTGGTGGCTAGAG+TGG | + | chr1.4:69228594-69228613 | MS.gene07311:intron | 55.0% |
| AGCCGCCAGTTCTCATGGGA+AGG | + | chr1.4:69229432-69229451 | MS.gene07311:intron | 60.0% | |
| CGTCCTGAAGGAGCCTTGCT+TGG | + | chr1.4:69229881-69229900 | MS.gene07311:CDS | 60.0% | |
| GCCGCCAGTTCTCATGGGAA+GGG | + | chr1.4:69229433-69229452 | MS.gene07311:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 69227710 | 69229977 | 69227710 | ID=MS.gene07311 |
| chr1.4 | mRNA | 69227710 | 69229977 | 69227710 | ID=MS.gene07311.t1;Parent=MS.gene07311 |
| chr1.4 | exon | 69227710 | 69227799 | 69227710 | ID=MS.gene07311.t1.exon1;Parent=MS.gene07311.t1 |
| chr1.4 | CDS | 69227710 | 69227799 | 69227710 | ID=cds.MS.gene07311.t1;Parent=MS.gene07311.t1 |
| chr1.4 | exon | 69227915 | 69228019 | 69227915 | ID=MS.gene07311.t1.exon2;Parent=MS.gene07311.t1 |
| chr1.4 | CDS | 69227915 | 69228019 | 69227915 | ID=cds.MS.gene07311.t1;Parent=MS.gene07311.t1 |
| chr1.4 | exon | 69228900 | 69228999 | 69228900 | ID=MS.gene07311.t1.exon3;Parent=MS.gene07311.t1 |
| chr1.4 | CDS | 69228900 | 69228999 | 69228900 | ID=cds.MS.gene07311.t1;Parent=MS.gene07311.t1 |
| chr1.4 | exon | 69229115 | 69229206 | 69229115 | ID=MS.gene07311.t1.exon4;Parent=MS.gene07311.t1 |
| chr1.4 | CDS | 69229115 | 69229206 | 69229115 | ID=cds.MS.gene07311.t1;Parent=MS.gene07311.t1 |
| chr1.4 | exon | 69229301 | 69229381 | 69229301 | ID=MS.gene07311.t1.exon5;Parent=MS.gene07311.t1 |
| chr1.4 | CDS | 69229301 | 69229381 | 69229301 | ID=cds.MS.gene07311.t1;Parent=MS.gene07311.t1 |
| chr1.4 | exon | 69229681 | 69229749 | 69229681 | ID=MS.gene07311.t1.exon6;Parent=MS.gene07311.t1 |
| chr1.4 | CDS | 69229681 | 69229749 | 69229681 | ID=cds.MS.gene07311.t1;Parent=MS.gene07311.t1 |
| chr1.4 | exon | 69229840 | 69229977 | 69229840 | ID=MS.gene07311.t1.exon7;Parent=MS.gene07311.t1 |
| chr1.4 | CDS | 69229840 | 69229977 | 69229840 | ID=cds.MS.gene07311.t1;Parent=MS.gene07311.t1 |
| Gene Sequence |
| Protein sequence |
