Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57175.t1 | XP_003611661.1 | 86.1 | 180 | 21 | 2 | 1 | 179 | 1 | 177 | 5.40E-78 | 300.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57175.t1 | G7K582 | 86.1 | 180 | 21 | 2 | 1 | 179 | 1 | 177 | 3.9e-78 | 300.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049171 | MS.gene57175 | -0.816357 | 5.77E-52 | -1.69E-46 |
| MS.gene049217 | MS.gene57175 | -0.850974 | 1.20E-60 | -1.69E-46 |
| MS.gene049222 | MS.gene57175 | -0.856831 | 2.46E-62 | -1.69E-46 |
| MS.gene049285 | MS.gene57175 | -0.810792 | 9.67E-51 | -1.69E-46 |
| MS.gene049320 | MS.gene57175 | -0.819179 | 1.33E-52 | -1.69E-46 |
| MS.gene049633 | MS.gene57175 | -0.844951 | 5.50E-59 | -1.69E-46 |
| MS.gene049634 | MS.gene57175 | 0.803204 | 3.90E-49 | -1.69E-46 |
| MS.gene050163 | MS.gene57175 | -0.811674 | 6.22E-51 | -1.69E-46 |
| MS.gene050165 | MS.gene57175 | -0.820029 | 8.51E-53 | -1.69E-46 |
| MS.gene050170 | MS.gene57175 | -0.804782 | 1.83E-49 | -1.69E-46 |
| MS.gene050323 | MS.gene57175 | -0.817065 | 4.00E-52 | -1.69E-46 |
| MS.gene050444 | MS.gene57175 | -0.852947 | 3.30E-61 | -1.69E-46 |
| MS.gene050504 | MS.gene57175 | -0.816088 | 6.62E-52 | -1.69E-46 |
| MS.gene050518 | MS.gene57175 | -0.813465 | 2.52E-51 | -1.69E-46 |
| MS.gene050538 | MS.gene57175 | -0.818043 | 2.41E-52 | -1.69E-46 |
| MS.gene050577 | MS.gene57175 | -0.803895 | 2.80E-49 | -1.69E-46 |
| MS.gene050612 | MS.gene57175 | -0.820855 | 5.50E-53 | -1.69E-46 |
| MS.gene050675 | MS.gene57175 | -0.81176 | 5.96E-51 | -1.69E-46 |
| MS.gene050710 | MS.gene57175 | 0.814812 | 1.27E-51 | -1.69E-46 |
| MS.gene050747 | MS.gene57175 | -0.801167 | 1.02E-48 | -1.69E-46 |
| MS.gene050772 | MS.gene57175 | -0.812171 | 4.85E-51 | -1.69E-46 |
| MS.gene050809 | MS.gene57175 | 0.82015 | 7.99E-53 | -1.69E-46 |
| MS.gene05080 | MS.gene57175 | -0.838407 | 2.93E-57 | -1.69E-46 |
| MS.gene05081 | MS.gene57175 | -0.813068 | 3.09E-51 | -1.69E-46 |
| MS.gene050868 | MS.gene57175 | -0.842832 | 2.03E-58 | -1.69E-46 |
| MS.gene050871 | MS.gene57175 | -0.839384 | 1.64E-57 | -1.69E-46 |
| MS.gene050904 | MS.gene57175 | -0.813097 | 3.04E-51 | -1.69E-46 |
| MS.gene051167 | MS.gene57175 | 0.803771 | 2.97E-49 | -1.69E-46 |
| MS.gene051228 | MS.gene57175 | -0.803169 | 3.96E-49 | -1.69E-46 |
| MS.gene051317 | MS.gene57175 | -0.824503 | 7.79E-54 | -1.69E-46 |
| MS.gene051651 | MS.gene57175 | 0.80012 | 1.67E-48 | -1.69E-46 |
| MS.gene051666 | MS.gene57175 | -0.806868 | 6.67E-50 | -1.69E-46 |
| MS.gene051838 | MS.gene57175 | -0.84192 | 3.55E-58 | -1.69E-46 |
| MS.gene051858 | MS.gene57175 | -0.823028 | 1.73E-53 | -1.69E-46 |
| MS.gene051863 | MS.gene57175 | 0.815347 | 9.68E-52 | -1.69E-46 |
| MS.gene052164 | MS.gene57175 | -0.801951 | 7.07E-49 | -1.69E-46 |
| MS.gene052379 | MS.gene57175 | -0.803403 | 3.54E-49 | -1.69E-46 |
| MS.gene052503 | MS.gene57175 | -0.801603 | 8.33E-49 | -1.69E-46 |
| MS.gene052615 | MS.gene57175 | -0.803636 | 3.17E-49 | -1.69E-46 |
| MS.gene052822 | MS.gene57175 | -0.800082 | 1.70E-48 | -1.69E-46 |
| MS.gene052825 | MS.gene57175 | -0.804504 | 2.09E-49 | -1.69E-46 |
| MS.gene052870 | MS.gene57175 | -0.818477 | 1.92E-52 | -1.69E-46 |
| MS.gene052872 | MS.gene57175 | -0.823331 | 1.47E-53 | -1.69E-46 |
| MS.gene052966 | MS.gene57175 | -0.800547 | 1.37E-48 | -1.69E-46 |
| MS.gene053108 | MS.gene57175 | 0.843908 | 1.05E-58 | -1.69E-46 |
| MS.gene053203 | MS.gene57175 | -0.800151 | 1.65E-48 | -1.69E-46 |
| MS.gene053420 | MS.gene57175 | 0.801019 | 1.10E-48 | -1.69E-46 |
| MS.gene053421 | MS.gene57175 | 0.846545 | 2.03E-59 | -1.69E-46 |
| MS.gene053479 | MS.gene57175 | -0.802207 | 6.26E-49 | -1.69E-46 |
| MS.gene053480 | MS.gene57175 | -0.811455 | 6.94E-51 | -1.69E-46 |
| MS.gene053632 | MS.gene57175 | -0.849078 | 4.07E-60 | -1.69E-46 |
| MS.gene053776 | MS.gene57175 | 0.825382 | 4.83E-54 | -1.69E-46 |
| MS.gene053824 | MS.gene57175 | -0.836985 | 6.79E-57 | -1.69E-46 |
| MS.gene053916 | MS.gene57175 | -0.837381 | 5.37E-57 | -1.69E-46 |
| MS.gene054290 | MS.gene57175 | 0.806832 | 6.79E-50 | -1.69E-46 |
| MS.gene054595 | MS.gene57175 | -0.802498 | 5.45E-49 | -1.69E-46 |
| MS.gene054642 | MS.gene57175 | -0.814382 | 1.59E-51 | -1.69E-46 |
| MS.gene054706 | MS.gene57175 | 0.838106 | 3.50E-57 | -1.69E-46 |
| MS.gene054707 | MS.gene57175 | 0.801422 | 9.07E-49 | -1.69E-46 |
| MS.gene05470 | MS.gene57175 | -0.800751 | 1.24E-48 | -1.69E-46 |
| MS.gene05494 | MS.gene57175 | -0.805377 | 1.37E-49 | -1.69E-46 |
| MS.gene055206 | MS.gene57175 | -0.855384 | 6.54E-62 | -1.69E-46 |
| MS.gene055502 | MS.gene57175 | -0.83665 | 8.26E-57 | -1.69E-46 |
| MS.gene055577 | MS.gene57175 | -0.845409 | 4.14E-59 | -1.69E-46 |
| MS.gene055748 | MS.gene57175 | -0.821529 | 3.85E-53 | -1.69E-46 |
| MS.gene055750 | MS.gene57175 | -0.811424 | 7.05E-51 | -1.69E-46 |
| MS.gene055751 | MS.gene57175 | -0.821933 | 3.10E-53 | -1.69E-46 |
| MS.gene05589 | MS.gene57175 | -0.829933 | 3.90E-55 | -1.69E-46 |
| MS.gene055941 | MS.gene57175 | -0.834129 | 3.58E-56 | -1.69E-46 |
| MS.gene056387 | MS.gene57175 | -0.860667 | 1.76E-63 | -1.69E-46 |
| MS.gene056487 | MS.gene57175 | -0.841244 | 5.35E-58 | -1.69E-46 |
| MS.gene056504 | MS.gene57175 | -0.828864 | 7.09E-55 | -1.69E-46 |
| MS.gene056510 | MS.gene57175 | -0.801682 | 8.02E-49 | -1.69E-46 |
| MS.gene056618 | MS.gene57175 | 0.882046 | 1.45E-70 | -1.69E-46 |
| MS.gene056657 | MS.gene57175 | -0.822777 | 1.98E-53 | -1.69E-46 |
| MS.gene056856 | MS.gene57175 | 0.808895 | 2.47E-50 | -1.69E-46 |
| MS.gene057076 | MS.gene57175 | -0.818663 | 1.74E-52 | -1.69E-46 |
| MS.gene057734 | MS.gene57175 | -0.80237 | 5.79E-49 | -1.69E-46 |
| MS.gene057857 | MS.gene57175 | -0.827751 | 1.32E-54 | -1.69E-46 |
| MS.gene057926 | MS.gene57175 | -0.818132 | 2.30E-52 | -1.69E-46 |
| MS.gene058158 | MS.gene57175 | 0.805591 | 1.24E-49 | -1.69E-46 |
| MS.gene058334 | MS.gene57175 | 0.811958 | 5.40E-51 | -1.69E-46 |
| MS.gene058338 | MS.gene57175 | -0.809183 | 2.15E-50 | -1.69E-46 |
| MS.gene058419 | MS.gene57175 | -0.828918 | 6.88E-55 | -1.69E-46 |
| MS.gene058723 | MS.gene57175 | -0.809673 | 1.68E-50 | -1.69E-46 |
| MS.gene058773 | MS.gene57175 | -0.804087 | 2.56E-49 | -1.69E-46 |
| MS.gene058838 | MS.gene57175 | -0.816563 | 5.19E-52 | -1.69E-46 |
| MS.gene059023 | MS.gene57175 | -0.825606 | 4.28E-54 | -1.69E-46 |
| MS.gene05913 | MS.gene57175 | -0.808918 | 2.45E-50 | -1.69E-46 |
| MS.gene05914 | MS.gene57175 | -0.808075 | 3.70E-50 | -1.69E-46 |
| MS.gene05926 | MS.gene57175 | 0.832288 | 1.03E-55 | -1.69E-46 |
| MS.gene05934 | MS.gene57175 | -0.848448 | 6.09E-60 | -1.69E-46 |
| MS.gene059526 | MS.gene57175 | 0.813044 | 3.12E-51 | -1.69E-46 |
| MS.gene059677 | MS.gene57175 | -0.831075 | 2.05E-55 | -1.69E-46 |
| MS.gene059699 | MS.gene57175 | 0.810798 | 9.64E-51 | -1.69E-46 |
| MS.gene059703 | MS.gene57175 | 0.809071 | 2.27E-50 | -1.69E-46 |
| MS.gene059718 | MS.gene57175 | -0.803268 | 3.78E-49 | -1.69E-46 |
| MS.gene059865 | MS.gene57175 | -0.823324 | 1.47E-53 | -1.69E-46 |
| MS.gene059902 | MS.gene57175 | -0.814625 | 1.40E-51 | -1.69E-46 |
| MS.gene060405 | MS.gene57175 | 0.809835 | 1.55E-50 | -1.69E-46 |
| MS.gene060762 | MS.gene57175 | -0.849862 | 2.46E-60 | -1.69E-46 |
| MS.gene060818 | MS.gene57175 | -0.809377 | 1.95E-50 | -1.69E-46 |
| MS.gene060823 | MS.gene57175 | 0.804148 | 2.48E-49 | -1.69E-46 |
| MS.gene060982 | MS.gene57175 | -0.821416 | 4.09E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57175.t1 | MTR_5g016450 | 86.111 | 180 | 21 | 2 | 1 | 179 | 1 | 177 | 5.18e-110 | 311 |
| MS.gene57175.t1 | MTR_5g016450 | 85.635 | 181 | 21 | 3 | 1 | 179 | 1 | 178 | 3.17e-108 | 306 |
| MS.gene57175.t1 | MTR_5g016450 | 85.629 | 167 | 20 | 2 | 1 | 166 | 1 | 164 | 7.01e-101 | 288 |
| MS.gene57175.t1 | MTR_3g462220 | 41.279 | 172 | 84 | 7 | 9 | 176 | 6 | 164 | 2.05e-28 | 103 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57175.t1 | AT4G37300 | 46.111 | 180 | 85 | 4 | 5 | 179 | 1 | 173 | 3.00e-44 | 144 |
Find 36 sgRNAs with CRISPR-Local
Find 49 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCGCTTCTGTTGGGTTTGA+TGG | 0.233826 | 5.3:+9188020 | None:intergenic |
| TTTGATTTGGTTAGTGATCT+TGG | 0.257781 | 5.3:+9188074 | None:intergenic |
| CATCGAATTGAGCTTTGATT+TGG | 0.326561 | 5.3:+9188061 | None:intergenic |
| CTATGAAAATAGACAGGAAA+TGG | 0.362452 | 5.3:-9187727 | MS.gene57175:intron |
| TAGGTGCTCTTGCTCCTATT+CGG | 0.371782 | 5.3:+9187372 | None:intergenic |
| CCAACATCAACATGGCTTGC+AGG | 0.374328 | 5.3:+9187652 | None:intergenic |
| GTTGGTGAAAACAAATTTAG+AGG | 0.379408 | 5.3:-9187634 | MS.gene57175:CDS |
| TGTTTCAGGTTCGCTTCTGT+TGG | 0.393664 | 5.3:+9188011 | None:intergenic |
| GCAACCCTGCCACAAATGAT+TGG | 0.403822 | 5.3:-9187603 | MS.gene57175:CDS |
| TCAACACAACATACCAGAAC+TGG | 0.405279 | 5.3:-9187959 | MS.gene57175:CDS |
| AGTGATCTTGGTTTGTTCCT+CGG | 0.406528 | 5.3:+9188086 | None:intergenic |
| TTGGGTTTGATGGGTCGTTT+TGG | 0.407967 | 5.3:+9188030 | None:intergenic |
| TGTATCTACTAATCCCTTTG+AGG | 0.412491 | 5.3:+9187894 | None:intergenic |
| TAACCTTGATCATGAACATC+TGG | 0.442683 | 5.3:-9187575 | MS.gene57175:intron |
| TCGCTTCTGTTGGGTTTGAT+GGG | 0.451444 | 5.3:+9188021 | None:intergenic |
| TATCAATTGAAAACAACTCT+TGG | 0.451803 | 5.3:+9187842 | None:intergenic |
| GGAACCCAATCATTTGTGGC+AGG | 0.462082 | 5.3:+9187598 | None:intergenic |
| ATGTCTCGTCTAAGCCGAAT+AGG | 0.462907 | 5.3:-9187386 | MS.gene57175:CDS |
| CAGACTATACTTTCCTCAAA+GGG | 0.469094 | 5.3:-9187907 | MS.gene57175:CDS |
| GTTTCAGGTTCGCTTCTGTT+GGG | 0.489259 | 5.3:+9188012 | None:intergenic |
| GTTAGAGAAGGAGATGAAAG+TGG | 0.492647 | 5.3:-9187691 | MS.gene57175:CDS |
| CAACCCTGCCACAAATGATT+GGG | 0.493231 | 5.3:-9187602 | MS.gene57175:CDS |
| AGATGTTCATGATCAAGGTT+AGG | 0.495165 | 5.3:+9187577 | None:intergenic |
| TTTATAAAAGCGGTTAGAGA+AGG | 0.500477 | 5.3:-9187703 | MS.gene57175:CDS |
| GTTAGGAACCCAATCATTTG+TGG | 0.507173 | 5.3:+9187594 | None:intergenic |
| AGATACACAAGATGAGTTTG+TGG | 0.508234 | 5.3:-9187878 | MS.gene57175:CDS |
| ATACCAGATGTTCATGATCA+AGG | 0.509861 | 5.3:+9187572 | None:intergenic |
| TATGAAAATAGACAGGAAAT+GGG | 0.515295 | 5.3:-9187726 | MS.gene57175:intron |
| AAAACCTCGTCACTACGACT+TGG | 0.560143 | 5.3:+9188114 | None:intergenic |
| TCAGACTATACTTTCCTCAA+AGG | 0.574625 | 5.3:-9187908 | MS.gene57175:CDS |
| CCTGCAAGCCATGTTGATGT+TGG | 0.587170 | 5.3:-9187652 | MS.gene57175:CDS |
| AGGAAATGGGTTTATAAAAG+CGG | 0.590246 | 5.3:-9187713 | MS.gene57175:CDS |
| GAACCCAATCATTTGTGGCA+GGG | 0.594079 | 5.3:+9187599 | None:intergenic |
| CCAAACAACAACATCATGGT+AGG | 0.619313 | 5.3:-9188156 | None:intergenic |
| AATTGATAAACAGCATCACA+CGG | 0.634825 | 5.3:-9187827 | MS.gene57175:intron |
| AAAACCAAGTCGTAGTGACG+AGG | 0.696472 | 5.3:-9188118 | MS.gene57175:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TCTGTTTCTATATTTATTTA+TGG | - | chr5.3:9187721-9187740 | MS.gene57175:intron | 15.0% |
| !!! | TTTTTGTGATTATGTTTTTT+TGG | - | chr5.3:9187755-9187774 | MS.gene57175:intron | 15.0% |
| ! | ATTGAACTATGAAAATAGAC+AGG | - | chr5.3:9187779-9187798 | MS.gene57175:intron | 25.0% |
| ! | TATCAATTGAAAACAACTCT+TGG | + | chr5.3:9187673-9187692 | None:intergenic | 25.0% |
| ! | TATGAAAATAGACAGGAAAT+GGG | - | chr5.3:9187786-9187805 | MS.gene57175:intron | 25.0% |
| !!! | ATAGATTGTGATTTGTTAAC+AGG | - | chr5.3:9188100-9188119 | MS.gene57175:CDS | 25.0% |
| AATTGATAAACAGCATCACA+CGG | - | chr5.3:9187685-9187704 | MS.gene57175:CDS | 30.0% | |
| CTATGAAAATAGACAGGAAA+TGG | - | chr5.3:9187785-9187804 | MS.gene57175:intron | 30.0% | |
| TATGTTGTGTTGAGAAAAAG+TGG | + | chr5.3:9187546-9187565 | None:intergenic | 30.0% | |
| TTTATAAAAGCGGTTAGAGA+AGG | - | chr5.3:9187809-9187828 | MS.gene57175:intron | 30.0% | |
| ! | AGGAAATGGGTTTATAAAAG+CGG | - | chr5.3:9187799-9187818 | MS.gene57175:intron | 30.0% |
| ! | GTTGGTGAAAACAAATTTAG+AGG | - | chr5.3:9187878-9187897 | MS.gene57175:CDS | 30.0% |
| !! | TTTGATTTGGTTAGTGATCT+TGG | + | chr5.3:9187441-9187460 | None:intergenic | 30.0% |
| AGATACACAAGATGAGTTTG+TGG | - | chr5.3:9187634-9187653 | MS.gene57175:CDS | 35.0% | |
| AGATGTTCATGATCAAGGTT+AGG | + | chr5.3:9187938-9187957 | None:intergenic | 35.0% | |
| ATACCAGATGTTCATGATCA+AGG | + | chr5.3:9187943-9187962 | None:intergenic | 35.0% | |
| CAGACTATACTTTCCTCAAA+GGG | - | chr5.3:9187605-9187624 | MS.gene57175:CDS | 35.0% | |
| GTCAAAGTTCTTTACACGAT+CGG | - | chr5.3:9188046-9188065 | MS.gene57175:CDS | 35.0% | |
| TAACCTTGATCATGAACATC+TGG | - | chr5.3:9187937-9187956 | MS.gene57175:CDS | 35.0% | |
| TCAGACTATACTTTCCTCAA+AGG | - | chr5.3:9187604-9187623 | MS.gene57175:CDS | 35.0% | |
| TGTATCTACTAATCCCTTTG+AGG | + | chr5.3:9187621-9187640 | None:intergenic | 35.0% | |
| TTGAGAAAAAGTGGAGTCAA+CGG | + | chr5.3:9187537-9187556 | None:intergenic | 35.0% | |
| ! | CATCGAATTGAGCTTTGATT+TGG | + | chr5.3:9187454-9187473 | None:intergenic | 35.0% |
| ! | TGTTTTCACCAACATCAACA+TGG | + | chr5.3:9187871-9187890 | None:intergenic | 35.0% |
| !! | GTTTGAAGTTTTTCCAGTTC+TGG | + | chr5.3:9187569-9187588 | None:intergenic | 35.0% |
| GTTAGAGAAGGAGATGAAAG+TGG | - | chr5.3:9187821-9187840 | MS.gene57175:intron | 40.0% | |
| GTTAGGAACCCAATCATTTG+TGG | + | chr5.3:9187921-9187940 | None:intergenic | 40.0% | |
| TCAACACAACATACCAGAAC+TGG | - | chr5.3:9187553-9187572 | MS.gene57175:intron | 40.0% | |
| TGAGAAAAAGTGGAGTCAAC+GGG | + | chr5.3:9187536-9187555 | None:intergenic | 40.0% | |
| !! | AGTGATCTTGGTTTGTTCCT+CGG | + | chr5.3:9187429-9187448 | None:intergenic | 40.0% |
| AAAACCAAGTCGTAGTGACG+AGG | - | chr5.3:9187394-9187413 | MS.gene57175:intron | 45.0% | |
| AAAACCTCGTCACTACGACT+TGG | + | chr5.3:9187401-9187420 | None:intergenic | 45.0% | |
| AAACAGCATCACACGGTTTG+TGG | - | chr5.3:9187692-9187711 | MS.gene57175:CDS | 45.0% | |
| ATGTCTCGTCTAAGCCGAAT+AGG | - | chr5.3:9188126-9188145 | MS.gene57175:CDS | 45.0% | |
| CAACCCTGCCACAAATGATT+GGG | - | chr5.3:9187910-9187929 | MS.gene57175:CDS | 45.0% | |
| GAACCCAATCATTTGTGGCA+GGG | + | chr5.3:9187916-9187935 | None:intergenic | 45.0% | |
| GAGAAAAAGTGGAGTCAACG+GGG | + | chr5.3:9187535-9187554 | None:intergenic | 45.0% | |
| TAGGTGCTCTTGCTCCTATT+CGG | + | chr5.3:9188143-9188162 | None:intergenic | 45.0% | |
| TCGCTTCTGTTGGGTTTGAT+GGG | + | chr5.3:9187494-9187513 | None:intergenic | 45.0% | |
| TTCGCTTCTGTTGGGTTTGA+TGG | + | chr5.3:9187495-9187514 | None:intergenic | 45.0% | |
| !! | GTTTCAGGTTCGCTTCTGTT+GGG | + | chr5.3:9187503-9187522 | None:intergenic | 45.0% |
| !! | TGTTTCAGGTTCGCTTCTGT+TGG | + | chr5.3:9187504-9187523 | None:intergenic | 45.0% |
| !! | TTGGGTTTGATGGGTCGTTT+TGG | + | chr5.3:9187485-9187504 | None:intergenic | 45.0% |
| !!! | ACGGGGTTTTGTTGTGTTTC+AGG | + | chr5.3:9187518-9187537 | None:intergenic | 45.0% |
| CCTGCAAGCCATGTTGATGT+TGG | - | chr5.3:9187860-9187879 | MS.gene57175:CDS | 50.0% | |
| GCAACCCTGCCACAAATGAT+TGG | - | chr5.3:9187909-9187928 | MS.gene57175:CDS | 50.0% | |
| GGAACCCAATCATTTGTGGC+AGG | + | chr5.3:9187917-9187936 | None:intergenic | 50.0% | |
| ! | CCAACATCAACATGGCTTGC+AGG | + | chr5.3:9187863-9187882 | None:intergenic | 50.0% |
| !!! | TGACGAGGTTTTGAACACCG+AGG | - | chr5.3:9187409-9187428 | MS.gene57175:intron | 50.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.3 | gene | 9187371 | 9188163 | 9187371 | ID=MS.gene57175 |
| chr5.3 | mRNA | 9187371 | 9188163 | 9187371 | ID=MS.gene57175.t1;Parent=MS.gene57175 |
| chr5.3 | exon | 9187828 | 9188163 | 9187828 | ID=MS.gene57175.t1.exon1;Parent=MS.gene57175.t1 |
| chr5.3 | CDS | 9187828 | 9188163 | 9187828 | ID=cds.MS.gene57175.t1;Parent=MS.gene57175.t1 |
| chr5.3 | exon | 9187576 | 9187737 | 9187576 | ID=MS.gene57175.t1.exon2;Parent=MS.gene57175.t1 |
| chr5.3 | CDS | 9187576 | 9187737 | 9187576 | ID=cds.MS.gene57175.t1;Parent=MS.gene57175.t1 |
| chr5.3 | exon | 9187371 | 9187412 | 9187371 | ID=MS.gene57175.t1.exon3;Parent=MS.gene57175.t1 |
| chr5.3 | CDS | 9187371 | 9187412 | 9187371 | ID=cds.MS.gene57175.t1;Parent=MS.gene57175.t1 |
| Gene Sequence |
| Protein sequence |
