Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene62491.t1 | XP_013464278.1 | 98.4 | 318 | 5 | 0 | 10 | 327 | 30 | 347 | 4.90E-178 | 633.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene62491.t1 | Q9SLK2 | 75.6 | 320 | 76 | 2 | 10 | 328 | 31 | 349 | 3.1e-136 | 486.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene62491.t1 | A0A072VAB2 | 98.4 | 318 | 5 | 0 | 10 | 327 | 30 | 347 | 3.6e-178 | 633.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene62491 | 0.844433 | 7.58E-59 | -1.69E-46 |
| MS.gene049190 | MS.gene62491 | 0.861184 | 1.23E-63 | -1.69E-46 |
| MS.gene049203 | MS.gene62491 | 0.804013 | 2.65E-49 | -1.69E-46 |
| MS.gene049227 | MS.gene62491 | 0.801229 | 9.94E-49 | -1.69E-46 |
| MS.gene049254 | MS.gene62491 | 0.848135 | 7.43E-60 | -1.69E-46 |
| MS.gene049350 | MS.gene62491 | 0.839396 | 1.63E-57 | -1.69E-46 |
| MS.gene049404 | MS.gene62491 | 0.831339 | 1.77E-55 | -1.69E-46 |
| MS.gene049441 | MS.gene62491 | 0.821027 | 5.02E-53 | -1.69E-46 |
| MS.gene049666 | MS.gene62491 | 0.801859 | 7.38E-49 | -1.69E-46 |
| MS.gene049672 | MS.gene62491 | 0.819729 | 9.96E-53 | -1.69E-46 |
| MS.gene049711 | MS.gene62491 | 0.879373 | 1.31E-69 | -1.69E-46 |
| MS.gene049807 | MS.gene62491 | 0.864791 | 9.43E-65 | -1.69E-46 |
| MS.gene049824 | MS.gene62491 | 0.824617 | 7.33E-54 | -1.69E-46 |
| MS.gene049825 | MS.gene62491 | 0.81211 | 5.00E-51 | -1.69E-46 |
| MS.gene049850 | MS.gene62491 | 0.81639 | 5.67E-52 | -1.69E-46 |
| MS.gene049873 | MS.gene62491 | 0.807248 | 5.55E-50 | -1.69E-46 |
| MS.gene050026 | MS.gene62491 | 0.801768 | 7.71E-49 | -1.69E-46 |
| MS.gene050221 | MS.gene62491 | 0.803821 | 2.90E-49 | -1.69E-46 |
| MS.gene050241 | MS.gene62491 | 0.823632 | 1.25E-53 | -1.69E-46 |
| MS.gene050258 | MS.gene62491 | 0.800484 | 1.41E-48 | -1.69E-46 |
| MS.gene050273 | MS.gene62491 | 0.821414 | 4.09E-53 | -1.69E-46 |
| MS.gene05045 | MS.gene62491 | 0.823315 | 1.48E-53 | -1.69E-46 |
| MS.gene050559 | MS.gene62491 | 0.866951 | 1.96E-65 | -1.69E-46 |
| MS.gene050561 | MS.gene62491 | 0.865105 | 7.52E-65 | -1.69E-46 |
| MS.gene050562 | MS.gene62491 | 0.862804 | 3.91E-64 | -1.69E-46 |
| MS.gene050657 | MS.gene62491 | 0.822925 | 1.82E-53 | -1.69E-46 |
| MS.gene051018 | MS.gene62491 | 0.832523 | 9.00E-56 | -1.69E-46 |
| MS.gene051021 | MS.gene62491 | 0.832497 | 9.14E-56 | -1.69E-46 |
| MS.gene051201 | MS.gene62491 | 0.815794 | 7.70E-52 | -1.69E-46 |
| MS.gene051247 | MS.gene62491 | 0.853875 | 1.79E-61 | -1.69E-46 |
| MS.gene051279 | MS.gene62491 | 0.902229 | 1.20E-78 | -1.69E-46 |
| MS.gene051388 | MS.gene62491 | 0.819789 | 9.66E-53 | -1.69E-46 |
| MS.gene05157 | MS.gene62491 | 0.804153 | 2.48E-49 | -1.69E-46 |
| MS.gene051594 | MS.gene62491 | 0.828425 | 9.05E-55 | -1.69E-46 |
| MS.gene051664 | MS.gene62491 | 0.810733 | 9.95E-51 | -1.69E-46 |
| MS.gene051700 | MS.gene62491 | 0.806895 | 6.59E-50 | -1.69E-46 |
| MS.gene051719 | MS.gene62491 | 0.852768 | 3.72E-61 | -1.69E-46 |
| MS.gene051720 | MS.gene62491 | 0.866315 | 3.12E-65 | -1.69E-46 |
| MS.gene051744 | MS.gene62491 | 0.898429 | 5.35E-77 | -1.69E-46 |
| MS.gene051957 | MS.gene62491 | 0.839474 | 1.55E-57 | -1.69E-46 |
| MS.gene052020 | MS.gene62491 | 0.80625 | 9.01E-50 | -1.69E-46 |
| MS.gene052037 | MS.gene62491 | 0.834394 | 3.07E-56 | -1.69E-46 |
| MS.gene052234 | MS.gene62491 | 0.834775 | 2.47E-56 | -1.69E-46 |
| MS.gene052239 | MS.gene62491 | -0.827021 | 1.97E-54 | -1.69E-46 |
| MS.gene052463 | MS.gene62491 | 0.825971 | 3.50E-54 | -1.69E-46 |
| MS.gene052514 | MS.gene62491 | 0.812186 | 4.81E-51 | -1.69E-46 |
| MS.gene052516 | MS.gene62491 | 0.85752 | 1.54E-62 | -1.69E-46 |
| MS.gene052519 | MS.gene62491 | 0.821199 | 4.58E-53 | -1.69E-46 |
| MS.gene052533 | MS.gene62491 | 0.807556 | 4.77E-50 | -1.69E-46 |
| MS.gene052582 | MS.gene62491 | 0.835122 | 2.02E-56 | -1.69E-46 |
| MS.gene052584 | MS.gene62491 | 0.829054 | 6.38E-55 | -1.69E-46 |
| MS.gene052609 | MS.gene62491 | 0.812731 | 3.66E-51 | -1.69E-46 |
| MS.gene052732 | MS.gene62491 | 0.810619 | 1.05E-50 | -1.69E-46 |
| MS.gene052773 | MS.gene62491 | 0.812141 | 4.92E-51 | -1.69E-46 |
| MS.gene053079 | MS.gene62491 | 0.81302 | 3.16E-51 | -1.69E-46 |
| MS.gene053122 | MS.gene62491 | 0.817526 | 3.15E-52 | -1.69E-46 |
| MS.gene053144 | MS.gene62491 | 0.891232 | 4.79E-74 | -1.69E-46 |
| MS.gene053226 | MS.gene62491 | 0.869068 | 4.08E-66 | -1.69E-46 |
| MS.gene053296 | MS.gene62491 | 0.813303 | 2.74E-51 | -1.69E-46 |
| MS.gene053536 | MS.gene62491 | 0.847297 | 1.26E-59 | -1.69E-46 |
| MS.gene053538 | MS.gene62491 | 0.846287 | 2.39E-59 | -1.69E-46 |
| MS.gene053581 | MS.gene62491 | 0.814226 | 1.72E-51 | -1.69E-46 |
| MS.gene053592 | MS.gene62491 | 0.810615 | 1.06E-50 | -1.69E-46 |
| MS.gene053599 | MS.gene62491 | 0.826223 | 3.05E-54 | -1.69E-46 |
| MS.gene053621 | MS.gene62491 | 0.807827 | 4.18E-50 | -1.69E-46 |
| MS.gene053883 | MS.gene62491 | 0.820666 | 6.08E-53 | -1.69E-46 |
| MS.gene053998 | MS.gene62491 | 0.871321 | 7.47E-67 | -1.69E-46 |
| MS.gene054142 | MS.gene62491 | 0.804333 | 2.27E-49 | -1.69E-46 |
| MS.gene05422 | MS.gene62491 | 0.819627 | 1.05E-52 | -1.69E-46 |
| MS.gene05423 | MS.gene62491 | 0.835806 | 1.35E-56 | -1.69E-46 |
| MS.gene054576 | MS.gene62491 | 0.815428 | 9.29E-52 | -1.69E-46 |
| MS.gene054584 | MS.gene62491 | 0.8863 | 3.86E-72 | -1.69E-46 |
| MS.gene05458 | MS.gene62491 | 0.811533 | 6.68E-51 | -1.69E-46 |
| MS.gene054651 | MS.gene62491 | 0.864206 | 1.44E-64 | -1.69E-46 |
| MS.gene054775 | MS.gene62491 | 0.813098 | 3.04E-51 | -1.69E-46 |
| MS.gene054991 | MS.gene62491 | 0.832803 | 7.68E-56 | -1.69E-46 |
| MS.gene055083 | MS.gene62491 | 0.835241 | 1.88E-56 | -1.69E-46 |
| MS.gene055144 | MS.gene62491 | 0.808729 | 2.68E-50 | -1.69E-46 |
| MS.gene055228 | MS.gene62491 | 0.807571 | 4.74E-50 | -1.69E-46 |
| MS.gene055260 | MS.gene62491 | 0.811732 | 6.04E-51 | -1.69E-46 |
| MS.gene055465 | MS.gene62491 | 0.847383 | 1.20E-59 | -1.69E-46 |
| MS.gene055466 | MS.gene62491 | 0.842408 | 2.63E-58 | -1.69E-46 |
| MS.gene055468 | MS.gene62491 | 0.818242 | 2.17E-52 | -1.69E-46 |
| MS.gene055469 | MS.gene62491 | 0.801344 | 9.41E-49 | -1.69E-46 |
| MS.gene055513 | MS.gene62491 | 0.804026 | 2.63E-49 | -1.69E-46 |
| MS.gene055537 | MS.gene62491 | 0.859713 | 3.42E-63 | -1.69E-46 |
| MS.gene055580 | MS.gene62491 | -0.849651 | 2.82E-60 | -1.69E-46 |
| MS.gene055778 | MS.gene62491 | 0.83239 | 9.71E-56 | -1.69E-46 |
| MS.gene055818 | MS.gene62491 | 0.800646 | 1.31E-48 | -1.69E-46 |
| MS.gene055890 | MS.gene62491 | 0.828111 | 1.08E-54 | -1.69E-46 |
| MS.gene055891 | MS.gene62491 | 0.81103 | 8.59E-51 | -1.69E-46 |
| MS.gene056043 | MS.gene62491 | -0.81394 | 1.98E-51 | -1.69E-46 |
| MS.gene056050 | MS.gene62491 | 0.869416 | 3.15E-66 | -1.69E-46 |
| MS.gene056169 | MS.gene62491 | 0.843521 | 1.33E-58 | -1.69E-46 |
| MS.gene056174 | MS.gene62491 | 0.850931 | 1.23E-60 | -1.69E-46 |
| MS.gene056228 | MS.gene62491 | 0.828849 | 7.15E-55 | -1.69E-46 |
| MS.gene056308 | MS.gene62491 | 0.830045 | 3.66E-55 | -1.69E-46 |
| MS.gene056366 | MS.gene62491 | 0.842591 | 2.35E-58 | -1.69E-46 |
| MS.gene056507 | MS.gene62491 | 0.824864 | 6.41E-54 | -1.69E-46 |
| MS.gene056553 | MS.gene62491 | 0.812803 | 3.53E-51 | -1.69E-46 |
| MS.gene056595 | MS.gene62491 | 0.81514 | 1.08E-51 | -1.69E-46 |
| MS.gene056677 | MS.gene62491 | 0.829053 | 6.38E-55 | -1.69E-46 |
| MS.gene056699 | MS.gene62491 | 0.802827 | 4.66E-49 | -1.69E-46 |
| MS.gene056854 | MS.gene62491 | 0.811894 | 5.57E-51 | -1.69E-46 |
| MS.gene05686 | MS.gene62491 | 0.88398 | 2.83E-71 | -1.69E-46 |
| MS.gene05690 | MS.gene62491 | 0.814923 | 1.20E-51 | -1.69E-46 |
| MS.gene057082 | MS.gene62491 | 0.831199 | 1.91E-55 | -1.69E-46 |
| MS.gene057102 | MS.gene62491 | 0.823568 | 1.29E-53 | -1.69E-46 |
| MS.gene057132 | MS.gene62491 | 0.839904 | 1.20E-57 | -1.69E-46 |
| MS.gene057294 | MS.gene62491 | 0.839928 | 1.18E-57 | -1.69E-46 |
| MS.gene057314 | MS.gene62491 | 0.802973 | 4.35E-49 | -1.69E-46 |
| MS.gene057444 | MS.gene62491 | 0.825744 | 3.97E-54 | -1.69E-46 |
| MS.gene057915 | MS.gene62491 | 0.820564 | 6.42E-53 | -1.69E-46 |
| MS.gene058010 | MS.gene62491 | 0.829392 | 5.28E-55 | -1.69E-46 |
| MS.gene058037 | MS.gene62491 | 0.811711 | 6.11E-51 | -1.69E-46 |
| MS.gene058339 | MS.gene62491 | 0.800255 | 1.57E-48 | -1.69E-46 |
| MS.gene058625 | MS.gene62491 | 0.854363 | 1.29E-61 | -1.69E-46 |
| MS.gene058649 | MS.gene62491 | 0.817162 | 3.80E-52 | -1.69E-46 |
| MS.gene058668 | MS.gene62491 | 0.85165 | 7.73E-61 | -1.69E-46 |
| MS.gene05894 | MS.gene62491 | 0.857768 | 1.30E-62 | -1.69E-46 |
| MS.gene058974 | MS.gene62491 | 0.817042 | 4.05E-52 | -1.69E-46 |
| MS.gene058979 | MS.gene62491 | 0.80291 | 4.48E-49 | -1.69E-46 |
| MS.gene059015 | MS.gene62491 | 0.881394 | 2.49E-70 | -1.69E-46 |
| MS.gene059154 | MS.gene62491 | 0.81105 | 8.50E-51 | -1.69E-46 |
| MS.gene059272 | MS.gene62491 | 0.831114 | 2.01E-55 | -1.69E-46 |
| MS.gene059424 | MS.gene62491 | 0.837022 | 6.64E-57 | -1.69E-46 |
| MS.gene059425 | MS.gene62491 | 0.81284 | 3.46E-51 | -1.69E-46 |
| MS.gene059460 | MS.gene62491 | 0.800513 | 1.39E-48 | -1.69E-46 |
| MS.gene059570 | MS.gene62491 | 0.822292 | 2.56E-53 | -1.69E-46 |
| MS.gene059584 | MS.gene62491 | 0.808509 | 2.99E-50 | -1.69E-46 |
| MS.gene059625 | MS.gene62491 | 0.860329 | 2.23E-63 | -1.69E-46 |
| MS.gene059634 | MS.gene62491 | 0.81428 | 1.67E-51 | -1.69E-46 |
| MS.gene059774 | MS.gene62491 | 0.816864 | 4.44E-52 | -1.69E-46 |
| MS.gene059965 | MS.gene62491 | 0.813921 | 2.00E-51 | -1.69E-46 |
| MS.gene060167 | MS.gene62491 | 0.807843 | 4.15E-50 | -1.69E-46 |
| MS.gene060312 | MS.gene62491 | 0.81013 | 1.34E-50 | -1.69E-46 |
| MS.gene060519 | MS.gene62491 | 0.854143 | 1.50E-61 | -1.69E-46 |
| MS.gene060521 | MS.gene62491 | 0.816005 | 6.91E-52 | -1.69E-46 |
| MS.gene060587 | MS.gene62491 | 0.841593 | 4.32E-58 | -1.69E-46 |
| MS.gene060603 | MS.gene62491 | 0.806066 | 9.85E-50 | -1.69E-46 |
| MS.gene060697 | MS.gene62491 | 0.812835 | 3.47E-51 | -1.69E-46 |
| MS.gene060962 | MS.gene62491 | 0.816999 | 4.14E-52 | -1.69E-46 |
| MS.gene061100 | MS.gene62491 | 0.809838 | 1.55E-50 | -1.69E-46 |
| MS.gene061188 | MS.gene62491 | 0.820644 | 6.15E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene62491.t1 | MTR_2g067760 | 98.119 | 319 | 6 | 0 | 10 | 328 | 30 | 348 | 0.0 | 651 |
| MS.gene62491.t1 | MTR_2g101400 | 63.009 | 319 | 116 | 2 | 10 | 326 | 26 | 344 | 4.25e-150 | 426 |
| MS.gene62491.t1 | MTR_7g086110 | 64.174 | 321 | 112 | 3 | 7 | 324 | 1 | 321 | 9.67e-149 | 421 |
| MS.gene62491.t1 | MTR_2g451450 | 62.252 | 302 | 113 | 1 | 11 | 311 | 30 | 331 | 1.02e-138 | 396 |
| MS.gene62491.t1 | MTR_2g451450 | 65.789 | 228 | 78 | 0 | 96 | 323 | 1 | 228 | 5.59e-110 | 320 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene62491.t1 | AT1G54320 | 75.625 | 320 | 76 | 2 | 10 | 328 | 31 | 349 | 1.08e-178 | 498 |
| MS.gene62491.t1 | AT1G79450 | 72.414 | 319 | 86 | 2 | 10 | 327 | 31 | 348 | 2.62e-172 | 482 |
| MS.gene62491.t1 | AT3G12740 | 73.125 | 320 | 84 | 2 | 10 | 328 | 32 | 350 | 1.07e-171 | 481 |
| MS.gene62491.t1 | AT1G16360 | 70.625 | 320 | 92 | 2 | 9 | 327 | 16 | 334 | 4.28e-171 | 478 |
| MS.gene62491.t1 | AT1G16360 | 70.846 | 319 | 91 | 2 | 10 | 327 | 31 | 348 | 4.32e-171 | 479 |
| MS.gene62491.t1 | AT1G16360 | 69.737 | 304 | 90 | 2 | 9 | 311 | 16 | 318 | 1.26e-158 | 447 |
| MS.gene62491.t1 | AT1G79450 | 72.826 | 276 | 73 | 2 | 53 | 327 | 7 | 281 | 6.52e-149 | 420 |
| MS.gene62491.t1 | AT5G46150 | 56.051 | 314 | 134 | 2 | 11 | 323 | 28 | 338 | 4.99e-129 | 372 |
| MS.gene62491.t1 | AT5G46150 | 56.051 | 314 | 134 | 2 | 11 | 323 | 28 | 338 | 4.99e-129 | 372 |
| MS.gene62491.t1 | AT5G46150 | 56.623 | 302 | 130 | 1 | 11 | 311 | 28 | 329 | 3.07e-127 | 367 |
| MS.gene62491.t1 | AT1G16360 | 65.072 | 209 | 71 | 2 | 9 | 216 | 16 | 223 | 6.81e-96 | 284 |
| MS.gene62491.t1 | AT1G16360 | 65.072 | 209 | 71 | 2 | 9 | 216 | 16 | 223 | 6.81e-96 | 284 |
| MS.gene62491.t1 | AT5G46150 | 54.854 | 206 | 92 | 1 | 11 | 215 | 28 | 233 | 1.22e-82 | 250 |
Find 67 sgRNAs with CRISPR-Local
Find 255 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAGGTTGTTGAAATTGTTTA+TGG | 0.247565 | 2.1:-31373145 | MS.gene62491:CDS |
| AGTGATAGGGAGCACAAATT+TGG | 0.303708 | 2.1:-31371628 | MS.gene62491:CDS |
| TTGCATACCGGCGATGATTC+TGG | 0.314059 | 2.1:+31372862 | None:intergenic |
| TATCGGAGTTGCTTCGCTAA+TGG | 0.328460 | 2.1:-31373269 | MS.gene62491:CDS |
| TGTCTCCCTGCAGGTTATTT+CGG | 0.333817 | 2.1:-31373323 | MS.gene62491:intron |
| CTGTTATTTGCAGTATCTTC+AGG | 0.335452 | 2.1:+31371760 | None:intergenic |
| TTCCAGAATGGTTCTATAAT+AGG | 0.338624 | 2.1:-31371583 | MS.gene62491:CDS |
| GCATCTCCTGGAAGAGTGAT+AGG | 0.345405 | 2.1:-31371642 | MS.gene62491:CDS |
| AGCTGATAGTATACATAAAT+AGG | 0.366101 | 2.1:+31372897 | None:intergenic |
| GTGCTCCCTATCACTCTTCC+AGG | 0.372048 | 2.1:+31371636 | None:intergenic |
| CACCTATTATAGAACCATTC+TGG | 0.379889 | 2.1:+31371581 | None:intergenic |
| CATCATATTTGTCATGGAAT+AGG | 0.380885 | 2.1:-31369618 | MS.gene62491:CDS |
| CTGAAGATACTGCAAATAAC+AGG | 0.383558 | 2.1:-31371759 | MS.gene62491:CDS |
| CCATATAACTTCCTAAAAGT+TGG | 0.396101 | 2.1:+31371124 | None:intergenic |
| AGGTTGTTGAAATTGTTTAT+GGG | 0.407143 | 2.1:-31373144 | MS.gene62491:CDS |
| TACCTTGTGGTCTCATAGCT+TGG | 0.407481 | 2.1:-31371729 | MS.gene62491:CDS |
| GGCATTGCTTATCTCACTGT+TGG | 0.409859 | 2.1:-31370962 | MS.gene62491:CDS |
| CGTCAAATTTGTATTGTTGA+CGG | 0.430499 | 2.1:+31371678 | None:intergenic |
| TATAACACATACAGTTTCAA+TGG | 0.439187 | 2.1:-31371043 | MS.gene62491:CDS |
| GTATGAGTCAGACTGCTTAC+CGG | 0.440324 | 2.1:-31373122 | MS.gene62491:CDS |
| TTCATTCTTTGTAGGCAACT+TGG | 0.442644 | 2.1:-31369646 | MS.gene62491:intron |
| ATTGCTTATCTCACTGTTGG+AGG | 0.447358 | 2.1:-31370959 | MS.gene62491:CDS |
| TTCGCTAATGGCTTCAAGAA+AGG | 0.457194 | 2.1:-31373257 | MS.gene62491:intron |
| CTACTACTAGCTGGCTTGGT+GGG | 0.464976 | 2.1:-31371000 | MS.gene62491:CDS |
| ACCGCTCGAGGTGTAAGAAT+AGG | 0.473978 | 2.1:+31373452 | None:intergenic |
| AATAGGTGATTTCATGTGCT+TGG | 0.475930 | 2.1:+31372914 | None:intergenic |
| CGTCAACAATACAAATTTGA+CGG | 0.477985 | 2.1:-31371677 | MS.gene62491:CDS |
| AGCAGGAGGATCTTATTGTC+TGG | 0.479332 | 2.1:-31371165 | MS.gene62491:CDS |
| TATGGAACAGTTGAATGAGC+AGG | 0.483440 | 2.1:-31371182 | MS.gene62491:intron |
| CTTACTGAGTTCTCTCCCTT+AGG | 0.490717 | 2.1:+31371793 | None:intergenic |
| CTATTCCATGACAAATATGA+TGG | 0.491865 | 2.1:+31369619 | None:intergenic |
| TAACTTCCTAAAAGTTGGTA+AGG | 0.500049 | 2.1:+31371129 | None:intergenic |
| TGAACAAGAAAGGCATCTCC+TGG | 0.500765 | 2.1:-31371654 | MS.gene62491:CDS |
| GTCGAAGTGATGAGCAATTG+AGG | 0.506813 | 2.1:-31371819 | MS.gene62491:CDS |
| ACCTCGTCTTTAGTGCCATC+CGG | 0.507629 | 2.1:+31373103 | None:intergenic |
| GAGATCCATCATATTTGTCA+TGG | 0.508248 | 2.1:-31369624 | MS.gene62491:CDS |
| GGTGGGAAGAATGATTTCCT+TGG | 0.509013 | 2.1:-31370983 | MS.gene62491:CDS |
| TTTCAAGTGTTACATCTATG+AGG | 0.517582 | 2.1:+31371071 | None:intergenic |
| ATAGAGGTGGATTTGAATCA+AGG | 0.521775 | 2.1:-31371097 | MS.gene62491:CDS |
| AGTGTTGTGTTCATTCCTAT+CGG | 0.524757 | 2.1:-31373286 | MS.gene62491:CDS |
| GAAGTTATATGGAAAGATAG+AGG | 0.534995 | 2.1:-31371113 | MS.gene62491:CDS |
| AATTTGACGGTGAACAAGAA+AGG | 0.544214 | 2.1:-31371664 | MS.gene62491:CDS |
| GTAAGAATAGGCTTGCAAGC+TGG | 0.553416 | 2.1:+31373464 | None:intergenic |
| CTGTCTACTACTAGCTGGCT+TGG | 0.554578 | 2.1:-31371004 | MS.gene62491:CDS |
| TGAGCAATTGAGGAGTCCTA+AGG | 0.562902 | 2.1:-31371809 | MS.gene62491:CDS |
| GAGCAATTGAGGAGTCCTAA+GGG | 0.567682 | 2.1:-31371808 | MS.gene62491:CDS |
| TCTACTACTAGCTGGCTTGG+TGG | 0.574076 | 2.1:-31371001 | MS.gene62491:CDS |
| CCTAAAAGTTGGTAAGGCAG+CGG | 0.576352 | 2.1:+31371135 | None:intergenic |
| TCGTACTGTCTACTACTAGC+TGG | 0.586718 | 2.1:-31371009 | MS.gene62491:CDS |
| GATGGAGAGTTGTATGCCGA+TGG | 0.590433 | 2.1:-31373620 | MS.gene62491:CDS |
| CATCTCCTGGAAGAGTGATA+GGG | 0.595404 | 2.1:-31371641 | MS.gene62491:CDS |
| ACATCTTAATGAATCGATAC+CGG | 0.606029 | 2.1:-31371554 | MS.gene62491:intron |
| ATTAGCGAAGCAACTCCGAT+AGG | 0.608650 | 2.1:+31373271 | None:intergenic |
| CAGTGAGATAAGCAATGCCA+AGG | 0.614950 | 2.1:+31370966 | None:intergenic |
| CTCCAAGCTATGAGACCACA+AGG | 0.620952 | 2.1:+31371727 | None:intergenic |
| GCCTATTCTTACACCTCGAG+CGG | 0.621999 | 2.1:-31373453 | MS.gene62491:intron |
| CAGAATGGTTCTATAATAGG+TGG | 0.623008 | 2.1:-31371580 | MS.gene62491:CDS |
| AACAGGTCAATTGTACCTTG+TGG | 0.623062 | 2.1:-31371742 | MS.gene62491:CDS |
| TGGCTTGACAAAATATACAA+TGG | 0.626612 | 2.1:+31370907 | None:intergenic |
| GTTATATGGAAAGATAGAGG+TGG | 0.643018 | 2.1:-31371110 | MS.gene62491:CDS |
| GAGTCAGACTGCTTACCGGA+TGG | 0.645552 | 2.1:-31373118 | MS.gene62491:CDS |
| GGAACAGTTGAATGAGCAGG+AGG | 0.647507 | 2.1:-31371179 | MS.gene62491:intron |
| AATGAGCACATACTATCCAT+CGG | 0.647540 | 2.1:+31373604 | None:intergenic |
| CATGGAATAGGAACCAAGGA+GGG | 0.649024 | 2.1:-31369606 | MS.gene62491:CDS |
| TTGTCATGGAATAGGAACCA+AGG | 0.667669 | 2.1:-31369610 | MS.gene62491:CDS |
| ACCGGATGGCACTAAAGACG+AGG | 0.712451 | 2.1:-31373104 | MS.gene62491:CDS |
| TCATGGAATAGGAACCAAGG+AGG | 0.714609 | 2.1:-31369607 | MS.gene62491:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTATTTTATTTTTTAAAAT+AGG | - | chr2.1:31373313-31373332 | MS.gene62491:CDS | 0.0% |
| !! | AAAAAAAAAAAAAAAAACTG+TGG | - | chr2.1:31372699-31372718 | MS.gene62491:intron | 10.0% |
| !! | CAATTATTACAAATATATAA+AGG | + | chr2.1:31371312-31371331 | None:intergenic | 10.0% |
| !!! | GTTTTATTTCTTATTATTTT+GGG | - | chr2.1:31369652-31369671 | MS.gene62491:intron | 10.0% |
| !!! | TGTTTTATTTCTTATTATTT+TGG | - | chr2.1:31369651-31369670 | MS.gene62491:intron | 10.0% |
| !! | AATTAATTGAGTAAATAGAT+AGG | - | chr2.1:31370996-31371015 | MS.gene62491:CDS | 15.0% |
| !! | AGAAATAAAACAGTAATTAT+TGG | + | chr2.1:31369643-31369662 | None:intergenic | 15.0% |
| !! | ATAGTTATCTTCTATAATTT+AGG | - | chr2.1:31371367-31371386 | MS.gene62491:intron | 15.0% |
| !! | TTTATTTATGTCAAGTAATT+TGG | - | chr2.1:31370830-31370849 | MS.gene62491:intron | 15.0% |
| !!! | TTGAAATTTTAAGATGAAAA+AGG | + | chr2.1:31371969-31371988 | None:intergenic | 15.0% |
| !! | ATATAATAAATGCCAATTTC+AGG | + | chr2.1:31372530-31372549 | None:intergenic | 20.0% |
| !! | ATGGTGAACAAAATAAATAT+TGG | + | chr2.1:31371998-31372017 | None:intergenic | 20.0% |
| !! | GAAATTAAATGAGCATTAAA+AGG | - | chr2.1:31370946-31370965 | MS.gene62491:CDS | 20.0% |
| !! | GTTCAACTTTCTTATAAAAT+TGG | - | chr2.1:31370684-31370703 | MS.gene62491:intron | 20.0% |
| !! | TATAATAAATGCCAATTTCA+GGG | + | chr2.1:31372529-31372548 | None:intergenic | 20.0% |
| !! | TGTTCCATAAAATATTCAAA+AGG | + | chr2.1:31372026-31372045 | None:intergenic | 20.0% |
| !!! | ACAATTTATTTTGAAGTCTT+GGG | - | chr2.1:31370726-31370745 | MS.gene62491:intron | 20.0% |
| !!! | ATTTTTAAAAATGAAGAGCA+CGG | - | chr2.1:31372805-31372824 | MS.gene62491:intron | 20.0% |
| !!! | GGATTGAAATTTTAAATGTT+AGG | + | chr2.1:31372491-31372510 | None:intergenic | 20.0% |
| !!! | GTTATTTTAGACAGTATATA+AGG | - | chr2.1:31370778-31370797 | MS.gene62491:intron | 20.0% |
| !!! | TACAATTTATTTTGAAGTCT+TGG | - | chr2.1:31370725-31370744 | MS.gene62491:intron | 20.0% |
| ! | AAAGAAAAGTTATTGCATAC+CGG | + | chr2.1:31370372-31370391 | None:intergenic | 25.0% |
| ! | AGCTGATAGTATACATAAAT+AGG | + | chr2.1:31370325-31370344 | None:intergenic | 25.0% |
| ! | AGGCTATATGAAATTTCATT+AGG | + | chr2.1:31370458-31370477 | None:intergenic | 25.0% |
| ! | AGGTTGTTGAAATTGTTTAT+GGG | - | chr2.1:31370075-31370094 | MS.gene62491:intron | 25.0% |
| ! | ATATGAAAAATCATGCATGA+TGG | + | chr2.1:31371337-31371356 | None:intergenic | 25.0% |
| ! | ATGAAAAATAGGTTAGGATT+AGG | + | chr2.1:31373558-31373577 | None:intergenic | 25.0% |
| ! | ATTTATGTCAAGTAATTTGG+TGG | - | chr2.1:31370833-31370852 | MS.gene62491:intron | 25.0% |
| ! | CAAAGAATGAAAAATAGGTT+AGG | + | chr2.1:31373564-31373583 | None:intergenic | 25.0% |
| ! | CATTGAACTTCATGAATTAT+GGG | + | chr2.1:31370225-31370244 | None:intergenic | 25.0% |
| ! | TATAACACATACAGTTTCAA+TGG | - | chr2.1:31372176-31372195 | MS.gene62491:intron | 25.0% |
| ! | TCATTGAACTTCATGAATTA+TGG | + | chr2.1:31370226-31370245 | None:intergenic | 25.0% |
| ! | TCGTATTAGTTGTTATGTTA+GGG | - | chr2.1:31373345-31373364 | MS.gene62491:intron | 25.0% |
| !! | AAAAGTCGAAAAAGTATAGT+TGG | - | chr2.1:31372921-31372940 | MS.gene62491:CDS | 25.0% |
| !! | ATTATGCTTCTTTTTATCGT+TGG | - | chr2.1:31372283-31372302 | MS.gene62491:intron | 25.0% |
| !! | CTCACCTTTTGAATATTTTA+TGG | - | chr2.1:31372019-31372038 | MS.gene62491:intron | 25.0% |
| !! | GTCAGTGTTTCATATTTTAT+GGG | - | chr2.1:31371884-31371903 | MS.gene62491:intron | 25.0% |
| !! | TATAGAAATGACTTTTCACA+TGG | - | chr2.1:31371925-31371944 | MS.gene62491:intron | 25.0% |
| !! | TGTCAGTGTTTCATATTTTA+TGG | - | chr2.1:31371883-31371902 | MS.gene62491:intron | 25.0% |
| !!! | ACCTATTTTTCATTCTTTGT+AGG | - | chr2.1:31373565-31373584 | MS.gene62491:intron | 25.0% |
| !!! | TTTAAGATGAAAAAGGTGTT+TGG | + | chr2.1:31371962-31371981 | None:intergenic | 25.0% |
| !!! | TTTTATTTTATGTAGCCGAT+TGG | - | chr2.1:31372586-31372605 | MS.gene62491:intron | 25.0% |
| !!! | TTTTTAAAAATGAAGAGCAC+GGG | - | chr2.1:31372806-31372825 | MS.gene62491:intron | 25.0% |
| AAAAAAAAACGTTAGGTCTG+TGG | + | chr2.1:31371106-31371125 | None:intergenic | 30.0% | |
| AAAAAAAACGTTAGGTCTGT+GGG | + | chr2.1:31371105-31371124 | None:intergenic | 30.0% | |
| AAAAATGAATAGTGGTGCAT+TGG | - | chr2.1:31370518-31370537 | MS.gene62491:intron | 30.0% | |
| AAAATATGAAACACTGACAC+TGG | + | chr2.1:31371882-31371901 | None:intergenic | 30.0% | |
| AAAGGAGTTGAAAGAGTTAA+AGG | + | chr2.1:31373406-31373425 | None:intergenic | 30.0% | |
| AAATATTCAAAAGGTGAGCA+TGG | + | chr2.1:31372017-31372036 | None:intergenic | 30.0% | |
| AACAATTTCAACAACCTGAT+AGG | + | chr2.1:31370072-31370091 | None:intergenic | 30.0% | |
| AAGAGTAATATGAACTGACA+TGG | - | chr2.1:31369679-31369698 | MS.gene62491:intron | 30.0% | |
| AATAAGATAGATCCCAAAGA+AGG | + | chr2.1:31371220-31371239 | None:intergenic | 30.0% | |
| AATCAGCAATGAATTCAAAG+AGG | + | chr2.1:31369807-31369826 | None:intergenic | 30.0% | |
| ACATCTTAATGAATCGATAC+CGG | - | chr2.1:31371665-31371684 | MS.gene62491:CDS | 30.0% | |
| ATAAGATAGATCCCAAAGAA+GGG | + | chr2.1:31371219-31371238 | None:intergenic | 30.0% | |
| CACATGGAACATTGTATATT+AGG | - | chr2.1:31372465-31372484 | MS.gene62491:intron | 30.0% | |
| CAGGTTGTTGAAATTGTTTA+TGG | - | chr2.1:31370074-31370093 | MS.gene62491:intron | 30.0% | |
| CATCATATTTGTCATGGAAT+AGG | - | chr2.1:31373601-31373620 | MS.gene62491:intron | 30.0% | |
| CCATATAACTTCCTAAAAGT+TGG | + | chr2.1:31372098-31372117 | None:intergenic | 30.0% | |
| CGTCAAATTTGTATTGTTGA+CGG | + | chr2.1:31371544-31371563 | None:intergenic | 30.0% | |
| CGTCAACAATACAAATTTGA+CGG | - | chr2.1:31371542-31371561 | MS.gene62491:intron | 30.0% | |
| CTACAACAAAATAGTAGATG+CGG | - | chr2.1:31370556-31370575 | MS.gene62491:intron | 30.0% | |
| CTATTCCATGACAAATATGA+TGG | + | chr2.1:31373603-31373622 | None:intergenic | 30.0% | |
| GAAGTTATATGGAAAGATAG+AGG | - | chr2.1:31372106-31372125 | MS.gene62491:intron | 30.0% | |
| GATAGGTACAAGAAAGTAAA+AGG | + | chr2.1:31370055-31370074 | None:intergenic | 30.0% | |
| GCCTACAAAGAATGAAAAAT+AGG | + | chr2.1:31373569-31373588 | None:intergenic | 30.0% | |
| GTCGTATTAGTTGTTATGTT+AGG | - | chr2.1:31373344-31373363 | MS.gene62491:intron | 30.0% | |
| TAAAGGGAGCTTATAAAGAA+AGG | + | chr2.1:31372638-31372657 | None:intergenic | 30.0% | |
| TAATTTCAGAATCAGCCAAT+CGG | + | chr2.1:31372604-31372623 | None:intergenic | 30.0% | |
| TACAGTTACAGATACATGTA+AGG | - | chr2.1:31370020-31370039 | MS.gene62491:intron | 30.0% | |
| TATACTTATCTCTCTTCACA+AGG | - | chr2.1:31371738-31371757 | MS.gene62491:CDS | 30.0% | |
| TGAACTGTGTTCTTATGAAA+AGG | - | chr2.1:31370279-31370298 | MS.gene62491:intron | 30.0% | |
| TGGCTTGACAAAATATACAA+TGG | + | chr2.1:31372315-31372334 | None:intergenic | 30.0% | |
| TTTACTTTCTTGTACCTATC+AGG | - | chr2.1:31370055-31370074 | MS.gene62491:intron | 30.0% | |
| TTTGCTCATCATTCTATTGT+GGG | + | chr2.1:31373026-31373045 | None:intergenic | 30.0% | |
| ! | AATGCACCACTATTCATTTT+TGG | + | chr2.1:31370519-31370538 | None:intergenic | 30.0% |
| ! | ATATATATTTTCCTTCACCG+GGG | - | chr2.1:31373368-31373387 | MS.gene62491:intron | 30.0% |
| ! | GATATATATTTTCCTTCACC+GGG | - | chr2.1:31373367-31373386 | MS.gene62491:intron | 30.0% |
| ! | GGATATATATTTTCCTTCAC+CGG | - | chr2.1:31373366-31373385 | MS.gene62491:intron | 30.0% |
| ! | GGTATGCAATAACTTTTCTT+TGG | - | chr2.1:31370371-31370390 | MS.gene62491:intron | 30.0% |
| ! | TCAAATTGTTATTGATGCAG+TGG | - | chr2.1:31369852-31369871 | MS.gene62491:intron | 30.0% |
| ! | TTCCAGAATGGTTCTATAAT+AGG | - | chr2.1:31371636-31371655 | MS.gene62491:CDS | 30.0% |
| ! | TTGTATATTTTGTCAAGCCA+AGG | - | chr2.1:31372315-31372334 | MS.gene62491:intron | 30.0% |
| ! | TTTCAAGTGTTACATCTATG+AGG | + | chr2.1:31372151-31372170 | None:intergenic | 30.0% |
| ! | TTTTGCTCATCATTCTATTG+TGG | + | chr2.1:31373027-31373046 | None:intergenic | 30.0% |
| !! | ATGCACCACTATTCATTTTT+GGG | + | chr2.1:31370518-31370537 | None:intergenic | 30.0% |
| !! | CAAACTGTTCTGAGATTTAA+AGG | + | chr2.1:31373424-31373443 | None:intergenic | 30.0% |
| !! | CCAACTTTTAGGAAGTTATA+TGG | - | chr2.1:31372095-31372114 | MS.gene62491:intron | 30.0% |
| !! | TAACTTCCTAAAAGTTGGTA+AGG | + | chr2.1:31372093-31372112 | None:intergenic | 30.0% |
| !!! | AGACCTAACGTTTTTTTTTG+AGG | - | chr2.1:31371107-31371126 | MS.gene62491:CDS | 30.0% |
| !!! | GACCTAACGTTTTTTTTTGA+GGG | - | chr2.1:31371108-31371127 | MS.gene62491:CDS | 30.0% |
| AAATTACCGTATTCTCGTAC+CGG | + | chr2.1:31372789-31372808 | None:intergenic | 35.0% | |
| AATAGGTGATTTCATGTGCT+TGG | + | chr2.1:31370308-31370327 | None:intergenic | 35.0% | |
| AATGAGCACATACTATCCAT+CGG | + | chr2.1:31369618-31369637 | None:intergenic | 35.0% | |
| AATTCTGTCCAAAGACAGTT+AGG | + | chr2.1:31370924-31370943 | None:intergenic | 35.0% | |
| AATTTGACGGTGAACAAGAA+AGG | - | chr2.1:31371555-31371574 | MS.gene62491:CDS | 35.0% | |
| ACACTGACACTTCAAAATGA+AGG | - | chr2.1:31371788-31371807 | MS.gene62491:CDS | 35.0% | |
| AGCAACCCAAAAATGAATAG+TGG | - | chr2.1:31370510-31370529 | MS.gene62491:intron | 35.0% | |
| AGTGTTGTGTTCATTCCTAT+CGG | - | chr2.1:31369933-31369952 | MS.gene62491:intron | 35.0% | |
| AGTTGAAAGAGTTAAAGGAC+CGG | + | chr2.1:31373401-31373420 | None:intergenic | 35.0% | |
| ATGAGCATTAAAAGGATGAG+AGG | - | chr2.1:31370954-31370973 | MS.gene62491:CDS | 35.0% | |
| CACCTATTATAGAACCATTC+TGG | + | chr2.1:31371641-31371660 | None:intergenic | 35.0% | |
| CATGGAAATGCAAAGAGAAA+TGG | + | chr2.1:31371255-31371274 | None:intergenic | 35.0% | |
| CGTTAGCTAAAAACGATTTC+TGG | - | chr2.1:31373467-31373486 | MS.gene62491:CDS | 35.0% | |
| CTCCCTCAAAAAAAAACGTT+AGG | + | chr2.1:31371113-31371132 | None:intergenic | 35.0% | |
| CTGAAGATACTGCAAATAAC+AGG | - | chr2.1:31371460-31371479 | MS.gene62491:intron | 35.0% | |
| GCAAATACAAGATGAATGCA+TGG | + | chr2.1:31371273-31371292 | None:intergenic | 35.0% | |
| GTTATATGGAAAGATAGAGG+TGG | - | chr2.1:31372109-31372128 | MS.gene62491:intron | 35.0% | |
| GTTCAATGAAGTTCACATTG+CGG | - | chr2.1:31370237-31370256 | MS.gene62491:intron | 35.0% | |
| TAAGATAGATCCCAAAGAAG+GGG | + | chr2.1:31371218-31371237 | None:intergenic | 35.0% | |
| TCTATTGTGGGTGAAAATTG+TGG | + | chr2.1:31373014-31373033 | None:intergenic | 35.0% | |
| TGAGCATTAAAAGGATGAGA+GGG | - | chr2.1:31370955-31370974 | MS.gene62491:CDS | 35.0% | |
| TGCCAATTTCAGGGTTAAAA+CGG | + | chr2.1:31372520-31372539 | None:intergenic | 35.0% | |
| TTCAAAACAACCACTTCAAG+TGG | + | chr2.1:31373520-31373539 | None:intergenic | 35.0% | |
| TTCATCTCTACTGAGTTAGT+AGG | + | chr2.1:31371033-31371052 | None:intergenic | 35.0% | |
| TTCATTCTTTGTAGGCAACT+TGG | - | chr2.1:31373573-31373592 | MS.gene62491:intron | 35.0% | |
| TTGCTGCATAAATTAGCACA+TGG | - | chr2.1:31372449-31372468 | MS.gene62491:intron | 35.0% | |
| TTTCCCAAAAACTTCCAGAA+TGG | - | chr2.1:31371624-31371643 | MS.gene62491:CDS | 35.0% | |
| ! | AAAATATGAAGTACCCGTAC+CGG | + | chr2.1:31373058-31373077 | None:intergenic | 35.0% |
| ! | ATAGAGGTGGATTTGAATCA+AGG | - | chr2.1:31372122-31372141 | MS.gene62491:intron | 35.0% |
| ! | CAGAATGGTTCTATAATAGG+TGG | - | chr2.1:31371639-31371658 | MS.gene62491:CDS | 35.0% |
| ! | CTGTTATTTGCAGTATCTTC+AGG | + | chr2.1:31371462-31371481 | None:intergenic | 35.0% |
| ! | TGAATTTGCGCTGTTTCAAA+AGG | + | chr2.1:31372383-31372402 | None:intergenic | 35.0% |
| ! | TTGAAGTGTCAGTGTTATAG+AGG | + | chr2.1:31371783-31371802 | None:intergenic | 35.0% |
| ! | TTGCACGTTTTATCTGTTTC+AGG | + | chr2.1:31370158-31370177 | None:intergenic | 35.0% |
| !! | AGAACCATTCTGGAAGTTTT+TGG | + | chr2.1:31371631-31371650 | None:intergenic | 35.0% |
| !! | GAACCATTCTGGAAGTTTTT+GGG | + | chr2.1:31371630-31371649 | None:intergenic | 35.0% |
| AACAGGTCAATTGTACCTTG+TGG | - | chr2.1:31371477-31371496 | MS.gene62491:intron | 40.0% | |
| ACTCAGTAGAGATGAACACA+TGG | - | chr2.1:31371037-31371056 | MS.gene62491:CDS | 40.0% | |
| AGAATTAGAGGGGAGATGAA+AGG | - | chr2.1:31371137-31371156 | MS.gene62491:CDS | 40.0% | |
| AGGGAGTTGTAGAATTAGAG+GGG | - | chr2.1:31371127-31371146 | MS.gene62491:CDS | 40.0% | |
| ATTAAAAGGATGAGAGGGAG+TGG | - | chr2.1:31370960-31370979 | MS.gene62491:CDS | 40.0% | |
| ATTGCTTATCTCACTGTTGG+AGG | - | chr2.1:31372260-31372279 | MS.gene62491:intron | 40.0% | |
| CTCATATGCCTAACTGTCTT+TGG | - | chr2.1:31370913-31370932 | MS.gene62491:CDS | 40.0% | |
| GACATCATGAAGCTACTTAC+CGG | + | chr2.1:31371687-31371706 | None:intergenic | 40.0% | |
| GAGGGAGTTGTAGAATTAGA+GGG | - | chr2.1:31371126-31371145 | MS.gene62491:CDS | 40.0% | |
| GATGAGCAAAAATGCATACC+CGG | - | chr2.1:31373036-31373055 | MS.gene62491:intron | 40.0% | |
| GCCAATTTCAGGGTTAAAAC+GGG | + | chr2.1:31372519-31372538 | None:intergenic | 40.0% | |
| GGATCTATCTTATTCCTCTC+TGG | - | chr2.1:31371226-31371245 | MS.gene62491:intron | 40.0% | |
| GTTGAAAGAGTTAAAGGACC+GGG | + | chr2.1:31373400-31373419 | None:intergenic | 40.0% | |
| TAATTTAAGTGTCTCCCTGC+AGG | - | chr2.1:31369887-31369906 | MS.gene62491:intron | 40.0% | |
| TATGGAACAGTTGAATGAGC+AGG | - | chr2.1:31372037-31372056 | MS.gene62491:intron | 40.0% | |
| TGAGGGAGTTGTAGAATTAG+AGG | - | chr2.1:31371125-31371144 | MS.gene62491:CDS | 40.0% | |
| TTCGCTAATGGCTTCAAGAA+AGG | - | chr2.1:31369962-31369981 | MS.gene62491:intron | 40.0% | |
| TTGTCATGGAATAGGAACCA+AGG | - | chr2.1:31373609-31373628 | MS.gene62491:intron | 40.0% | |
| ! | AAATATGAAGTACCCGTACC+GGG | + | chr2.1:31373057-31373076 | None:intergenic | 40.0% |
| ! | ACTTTTACCAGAATCATCGC+CGG | - | chr2.1:31370350-31370369 | MS.gene62491:intron | 40.0% |
| ! | AGTGATAGGGAGCACAAATT+TGG | - | chr2.1:31371591-31371610 | MS.gene62491:CDS | 40.0% |
| ! | ATTTGGTGGAGTTGAACAAG+TGG | - | chr2.1:31370847-31370866 | MS.gene62491:intron | 40.0% |
| !! | ACCCGTTTTAACCCTGAAAT+TGG | - | chr2.1:31372515-31372534 | MS.gene62491:intron | 40.0% |
| !!! | ATTTTTGGGTTGCTTGCTCT+GGG | + | chr2.1:31370504-31370523 | None:intergenic | 40.0% |
| AAGAGAAATGGAGTCCAGAG+AGG | + | chr2.1:31371243-31371262 | None:intergenic | 45.0% | |
| AATGTACCAAAGGTCTGTGC+AGG | - | chr2.1:31370880-31370899 | MS.gene62491:intron | 45.0% | |
| AGAATGCCGAAATAACCTGC+AGG | + | chr2.1:31369905-31369924 | None:intergenic | 45.0% | |
| AGCAGGAGGATCTTATTGTC+TGG | - | chr2.1:31372054-31372073 | MS.gene62491:intron | 45.0% | |
| AGGTCTATGCTGCATAGGTA+TGG | - | chr2.1:31372737-31372756 | MS.gene62491:intron | 45.0% | |
| AGTAGAGATGAACACATGGC+CGG | - | chr2.1:31371041-31371060 | MS.gene62491:CDS | 45.0% | |
| ATGCTGCATAGGTATGGGTA+CGG | - | chr2.1:31372743-31372762 | MS.gene62491:intron | 45.0% | |
| ATGTAAGACTTCCCAGATGG+TGG | - | chr2.1:31370478-31370497 | MS.gene62491:intron | 45.0% | |
| ATTAGCGAAGCAACTCCGAT+AGG | + | chr2.1:31369951-31369970 | None:intergenic | 45.0% | |
| ATTATGGGACAGAGCTAGAC+TGG | + | chr2.1:31370210-31370229 | None:intergenic | 45.0% | |
| CAAAAATGCATACCCGGTAC+GGG | - | chr2.1:31373042-31373061 | MS.gene62491:intron | 45.0% | |
| CAGACTGCAGACTCACTAAA+GGG | + | chr2.1:31372654-31372673 | None:intergenic | 45.0% | |
| CAGCCGTTGTATGAATCCAA+TGG | - | chr2.1:31373186-31373205 | MS.gene62491:intron | 45.0% | |
| CAGTGAGATAAGCAATGCCA+AGG | + | chr2.1:31372256-31372275 | None:intergenic | 45.0% | |
| CATCTCCTGGAAGAGTGATA+GGG | - | chr2.1:31371578-31371597 | MS.gene62491:CDS | 45.0% | |
| CATGGAATAGGAACCAAGGA+GGG | - | chr2.1:31373613-31373632 | MS.gene62491:intron | 45.0% | |
| CCATCTGGGAAGTCTTACAT+AGG | + | chr2.1:31370478-31370497 | None:intergenic | 45.0% | |
| CCTATGTAAGACTTCCCAGA+TGG | - | chr2.1:31370475-31370494 | MS.gene62491:intron | 45.0% | |
| CGGCCATTGGATTCATACAA+CGG | + | chr2.1:31373192-31373211 | None:intergenic | 45.0% | |
| CTTACTGAGTTCTCTCCCTT+AGG | + | chr2.1:31371429-31371448 | None:intergenic | 45.0% | |
| GAATGCCGAAATAACCTGCA+GGG | + | chr2.1:31369904-31369923 | None:intergenic | 45.0% | |
| GAGAATGCAAGTACGTACCT+TGG | + | chr2.1:31372335-31372354 | None:intergenic | 45.0% | |
| GAGCAATTGAGGAGTCCTAA+GGG | - | chr2.1:31371411-31371430 | MS.gene62491:intron | 45.0% | |
| GCAAAAATGCATACCCGGTA+CGG | - | chr2.1:31373041-31373060 | MS.gene62491:intron | 45.0% | |
| GGCATTGCTTATCTCACTGT+TGG | - | chr2.1:31372257-31372276 | MS.gene62491:intron | 45.0% | |
| GGTCTATGCTGCATAGGTAT+GGG | - | chr2.1:31372738-31372757 | MS.gene62491:intron | 45.0% | |
| GGTGGGAAGAATGATTTCCT+TGG | - | chr2.1:31372236-31372255 | MS.gene62491:intron | 45.0% | |
| GTAAGAATAGGCTTGCAAGC+TGG | + | chr2.1:31369758-31369777 | None:intergenic | 45.0% | |
| GTATGAGTCAGACTGCTTAC+CGG | - | chr2.1:31370097-31370116 | MS.gene62491:intron | 45.0% | |
| GTCGAAGTGATGAGCAATTG+AGG | - | chr2.1:31371400-31371419 | MS.gene62491:intron | 45.0% | |
| TACCTTGTGGTCTCATAGCT+TGG | - | chr2.1:31371490-31371509 | MS.gene62491:intron | 45.0% | |
| TACGGTACCCAGTACGATAT+GGG | - | chr2.1:31372761-31372780 | MS.gene62491:intron | 45.0% | |
| TAGAGGGGAGATGAAAGGAT+AGG | - | chr2.1:31371142-31371161 | MS.gene62491:CDS | 45.0% | |
| TAGATCCCAAAGAAGGGGAA+AGG | + | chr2.1:31371213-31371232 | None:intergenic | 45.0% | |
| TATCGGAGTTGCTTCGCTAA+TGG | - | chr2.1:31369950-31369969 | MS.gene62491:intron | 45.0% | |
| TCAGGGTTAAAACGGGTGAA+TGG | + | chr2.1:31372512-31372531 | None:intergenic | 45.0% | |
| TCATGGAATAGGAACCAAGG+AGG | - | chr2.1:31373612-31373631 | MS.gene62491:intron | 45.0% | |
| TCGTACTGTCTACTACTAGC+TGG | - | chr2.1:31372210-31372229 | MS.gene62491:intron | 45.0% | |
| TGAGCAATTGAGGAGTCCTA+AGG | - | chr2.1:31371410-31371429 | MS.gene62491:intron | 45.0% | |
| TGTCTCCCTGCAGGTTATTT+CGG | - | chr2.1:31369896-31369915 | MS.gene62491:intron | 45.0% | |
| !! | AACCTCACACTCTGAAGCAT+GGG | + | chr2.1:31373089-31373108 | None:intergenic | 45.0% |
| !! | CCTAAAAGTTGGTAAGGCAG+CGG | + | chr2.1:31372087-31372106 | None:intergenic | 45.0% |
| !! | TCTAGTAGTTTTACCGCTCG+AGG | + | chr2.1:31369782-31369801 | None:intergenic | 45.0% |
| !! | TGAACAAGAAAGGCATCTCC+TGG | - | chr2.1:31371565-31371584 | MS.gene62491:CDS | 45.0% |
| !!! | CATTTTTGGGTTGCTTGCTC+TGG | + | chr2.1:31370505-31370524 | None:intergenic | 45.0% |
| !! | AATTATTACAAATATATAAA+GGG | + | chr2.1:31371311-31371330 | None:intergenic | 5.0% |
| !! | ATAAAATTTAAATTATACAA+TGG | + | chr2.1:31373285-31373304 | None:intergenic | 5.0% |
| AACGTTAGGTCTGTGGGACT+TGG | + | chr2.1:31371099-31371118 | None:intergenic | 50.0% | |
| ACCCAGTACGATATGGGTAC+CGG | - | chr2.1:31372767-31372786 | MS.gene62491:intron | 50.0% | |
| ACCGCTCGAGGTGTAAGAAT+AGG | + | chr2.1:31369770-31369789 | None:intergenic | 50.0% | |
| ACCGGTACCCATATCGTACT+GGG | + | chr2.1:31372771-31372790 | None:intergenic | 50.0% | |
| ACCTCGTCTTTAGTGCCATC+CGG | + | chr2.1:31370119-31370138 | None:intergenic | 50.0% | |
| AGGGGAGATGAAAGGATAGG+AGG | - | chr2.1:31371145-31371164 | MS.gene62491:CDS | 50.0% | |
| AGTTGAACAAGTGGCCTGGA+GGG | - | chr2.1:31370856-31370875 | MS.gene62491:intron | 50.0% | |
| ATCCCAAAGAAGGGGAAAGG+AGG | + | chr2.1:31371210-31371229 | None:intergenic | 50.0% | |
| ATTGGCAGTCAAGGCAAGAG+AGG | - | chr2.1:31373224-31373243 | MS.gene62491:intron | 50.0% | |
| CACCTTACATACCATGCTCC+CGG | + | chr2.1:31371063-31371082 | None:intergenic | 50.0% | |
| CCTGGAGGGAAATGTACCAA+AGG | - | chr2.1:31370870-31370889 | MS.gene62491:intron | 50.0% | |
| CCTTTGGTACATTTCCCTCC+AGG | + | chr2.1:31370873-31370892 | None:intergenic | 50.0% | |
| CTCCAAGCTATGAGACCACA+AGG | + | chr2.1:31371495-31371514 | None:intergenic | 50.0% | |
| CTGTCTACTACTAGCTGGCT+TGG | - | chr2.1:31372215-31372234 | MS.gene62491:intron | 50.0% | |
| CTGTGAGGTCTATGCTGCAT+AGG | - | chr2.1:31372732-31372751 | MS.gene62491:intron | 50.0% | |
| GCAGACTGCAGACTCACTAA+AGG | + | chr2.1:31372655-31372674 | None:intergenic | 50.0% | |
| GCATCTCCTGGAAGAGTGAT+AGG | - | chr2.1:31371577-31371596 | MS.gene62491:CDS | 50.0% | |
| GCCTATTCTTACACCTCGAG+CGG | - | chr2.1:31369766-31369785 | MS.gene62491:intron | 50.0% | |
| GGAACAGTTGAATGAGCAGG+AGG | - | chr2.1:31372040-31372059 | MS.gene62491:intron | 50.0% | |
| GTACGGTACCCAGTACGATA+TGG | - | chr2.1:31372760-31372779 | MS.gene62491:intron | 50.0% | |
| GTAGAGATGAACACATGGCC+GGG | - | chr2.1:31371042-31371061 | MS.gene62491:CDS | 50.0% | |
| TACCCATGCTTCAGAGTGTG+AGG | - | chr2.1:31373084-31373103 | MS.gene62491:CDS | 50.0% | |
| TACCGGTACCCATATCGTAC+TGG | + | chr2.1:31372772-31372791 | None:intergenic | 50.0% | |
| TCCCAAAGAAGGGGAAAGGA+GGG | + | chr2.1:31371209-31371228 | None:intergenic | 50.0% | |
| TCCCTCCTTTCCCCTTCTTT+GGG | - | chr2.1:31371205-31371224 | MS.gene62491:intron | 50.0% | |
| TCTTCAGCAGCCACTTGAAG+TGG | - | chr2.1:31373507-31373526 | MS.gene62491:intron | 50.0% | |
| TGTGGCTTGAAGTTGCTGTG+AGG | - | chr2.1:31372717-31372736 | MS.gene62491:intron | 50.0% | |
| TTGCATACCGGCGATGATTC+TGG | + | chr2.1:31370360-31370379 | None:intergenic | 50.0% | |
| ! | ACAGAGCTAGACTGGTGTCA+AGG | + | chr2.1:31370202-31370221 | None:intergenic | 50.0% |
| ! | CCGCTGCCTTACCAACTTTT+AGG | - | chr2.1:31372084-31372103 | MS.gene62491:intron | 50.0% |
| !! | CTACTACTAGCTGGCTTGGT+GGG | - | chr2.1:31372219-31372238 | MS.gene62491:intron | 50.0% |
| !! | GAACCTCACACTCTGAAGCA+TGG | + | chr2.1:31373090-31373109 | None:intergenic | 50.0% |
| !! | GGCTGAGAGCATTGATCTCT+CGG | + | chr2.1:31373171-31373190 | None:intergenic | 50.0% |
| !! | TCTACTACTAGCTGGCTTGG+TGG | - | chr2.1:31372218-31372237 | MS.gene62491:intron | 50.0% |
| !! | TGGGTACCGGTACGAGAATA+CGG | - | chr2.1:31372780-31372799 | MS.gene62491:intron | 50.0% |
| AAAGGACCGGGTTCAAACCC+CGG | + | chr2.1:31373388-31373407 | None:intergenic | 55.0% | |
| AAGGTCTGTGCAGGAGCAGT+AGG | - | chr2.1:31370889-31370908 | MS.gene62491:intron | 55.0% | |
| ACCGGATGGCACTAAAGACG+AGG | - | chr2.1:31370115-31370134 | MS.gene62491:intron | 55.0% | |
| ACTGCTCCTGCACAGACCTT+TGG | + | chr2.1:31370889-31370908 | None:intergenic | 55.0% | |
| CTCCCTCCTTTCCCCTTCTT+TGG | - | chr2.1:31371204-31371223 | MS.gene62491:intron | 55.0% | |
| CTGCATCTGTCTGCTGATGC+AGG | + | chr2.1:31373148-31373167 | None:intergenic | 55.0% | |
| GAGTCAGACTGCTTACCGGA+TGG | - | chr2.1:31370101-31370120 | MS.gene62491:intron | 55.0% | |
| GAGTTGAACAAGTGGCCTGG+AGG | - | chr2.1:31370855-31370874 | MS.gene62491:intron | 55.0% | |
| GTGCTCCCTATCACTCTTCC+AGG | + | chr2.1:31371586-31371605 | None:intergenic | 55.0% | |
| GTGGAGTTGAACAAGTGGCC+TGG | - | chr2.1:31370852-31370871 | MS.gene62491:intron | 55.0% | |
| TGAATCCAATGGCCGACCTC+TGG | - | chr2.1:31373197-31373216 | MS.gene62491:intron | 55.0% | |
| TTGACTGCCAATGCAGCCAG+AGG | + | chr2.1:31373216-31373235 | None:intergenic | 55.0% | |
| ! | TCTGGCTGCATTGGCAGTCA+AGG | - | chr2.1:31373215-31373234 | MS.gene62491:intron | 55.0% |
| CCTTCACCGGGGTTTGAACC+CGG | - | chr2.1:31373379-31373398 | MS.gene62491:intron | 60.0% | |
| CTGCCAATGCAGCCAGAGGT+CGG | + | chr2.1:31373212-31373231 | None:intergenic | 60.0% | |
| TGAACACATGGCCGGGAGCA+TGG | - | chr2.1:31371049-31371068 | MS.gene62491:CDS | 60.0% | |
| ! | CTTGCTCTGGGCCACCATCT+GGG | + | chr2.1:31370492-31370511 | None:intergenic | 60.0% |
| ! | GGCCGGGAGCATGGTATGTA+AGG | - | chr2.1:31371058-31371077 | MS.gene62491:CDS | 60.0% |
| CCGGGTTCAAACCCCGGTGA+AGG | + | chr2.1:31373382-31373401 | None:intergenic | 65.0% | |
| TGCAGCCAGAGGTCGGCCAT+TGG | + | chr2.1:31373205-31373224 | None:intergenic | 65.0% | |
| TGGCCGACCTCTGGCTGCAT+TGG | - | chr2.1:31373206-31373225 | MS.gene62491:intron | 65.0% | |
| ! | GCTTGCTCTGGGCCACCATC+TGG | + | chr2.1:31370493-31370512 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.1 | gene | 31369600 | 31373641 | 31369600 | ID=MS.gene62491 |
| chr2.1 | mRNA | 31369600 | 31373641 | 31369600 | ID=MS.gene62491.t1;Parent=MS.gene62491 |
| chr2.1 | exon | 31373617 | 31373641 | 31373617 | ID=MS.gene62491.t1.exon1;Parent=MS.gene62491.t1 |
| chr2.1 | CDS | 31373617 | 31373641 | 31373617 | ID=cds.MS.gene62491.t1;Parent=MS.gene62491.t1 |
| chr2.1 | exon | 31373454 | 31373512 | 31373454 | ID=MS.gene62491.t1.exon2;Parent=MS.gene62491.t1 |
| chr2.1 | CDS | 31373454 | 31373512 | 31373454 | ID=cds.MS.gene62491.t1;Parent=MS.gene62491.t1 |
| chr2.1 | exon | 31373258 | 31373332 | 31373258 | ID=MS.gene62491.t1.exon3;Parent=MS.gene62491.t1 |
| chr2.1 | CDS | 31373258 | 31373332 | 31373258 | ID=cds.MS.gene62491.t1;Parent=MS.gene62491.t1 |
| chr2.1 | exon | 31373051 | 31373164 | 31373051 | ID=MS.gene62491.t1.exon4;Parent=MS.gene62491.t1 |
| chr2.1 | CDS | 31373051 | 31373164 | 31373051 | ID=cds.MS.gene62491.t1;Parent=MS.gene62491.t1 |
| chr2.1 | exon | 31372870 | 31372940 | 31372870 | ID=MS.gene62491.t1.exon5;Parent=MS.gene62491.t1 |
| chr2.1 | CDS | 31372870 | 31372940 | 31372870 | ID=cds.MS.gene62491.t1;Parent=MS.gene62491.t1 |
| chr2.1 | exon | 31371555 | 31371852 | 31371555 | ID=MS.gene62491.t1.exon6;Parent=MS.gene62491.t1 |
| chr2.1 | CDS | 31371555 | 31371852 | 31371555 | ID=cds.MS.gene62491.t1;Parent=MS.gene62491.t1 |
| chr2.1 | exon | 31370905 | 31371194 | 31370905 | ID=MS.gene62491.t1.exon7;Parent=MS.gene62491.t1 |
| chr2.1 | CDS | 31370905 | 31371194 | 31370905 | ID=cds.MS.gene62491.t1;Parent=MS.gene62491.t1 |
| chr2.1 | exon | 31369600 | 31369654 | 31369600 | ID=MS.gene62491.t1.exon8;Parent=MS.gene62491.t1 |
| chr2.1 | CDS | 31369600 | 31369654 | 31369600 | ID=cds.MS.gene62491.t1;Parent=MS.gene62491.t1 |
| Gene Sequence |
| Protein sequence |
