Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene77842.t1 | XP_003599114.1 | 82.7 | 428 | 74 | 0 | 1 | 428 | 782 | 1209 | 4.50E-202 | 714.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene77842.t1 | Q9LRR4 | 27.2 | 301 | 116 | 3 | 1 | 298 | 792 | 992 | 2.5e-23 | 111.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene77842.t1 | G7IWK6 | 82.7 | 428 | 74 | 0 | 1 | 428 | 782 | 1209 | 3.3e-202 | 714.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049171 | MS.gene77842 | -0.832705 | 8.12E-56 | -1.69E-46 |
| MS.gene049217 | MS.gene77842 | -0.816928 | 4.29E-52 | -1.69E-46 |
| MS.gene049222 | MS.gene77842 | -0.826474 | 2.66E-54 | -1.69E-46 |
| MS.gene049265 | MS.gene77842 | 0.823017 | 1.74E-53 | -1.69E-46 |
| MS.gene049281 | MS.gene77842 | 0.806528 | 7.87E-50 | -1.69E-46 |
| MS.gene049285 | MS.gene77842 | -0.818143 | 2.29E-52 | -1.69E-46 |
| MS.gene049320 | MS.gene77842 | -0.8156 | 8.51E-52 | -1.69E-46 |
| MS.gene049425 | MS.gene77842 | 0.801026 | 1.09E-48 | -1.69E-46 |
| MS.gene049611 | MS.gene77842 | 0.829419 | 5.20E-55 | -1.69E-46 |
| MS.gene049633 | MS.gene77842 | -0.806413 | 8.32E-50 | -1.69E-46 |
| MS.gene049634 | MS.gene77842 | 0.809197 | 2.13E-50 | -1.69E-46 |
| MS.gene050083 | MS.gene77842 | 0.81711 | 3.91E-52 | -1.69E-46 |
| MS.gene050163 | MS.gene77842 | -0.816823 | 4.53E-52 | -1.69E-46 |
| MS.gene050165 | MS.gene77842 | -0.817159 | 3.81E-52 | -1.69E-46 |
| MS.gene050338 | MS.gene77842 | 0.80201 | 6.87E-49 | -1.69E-46 |
| MS.gene050381 | MS.gene77842 | 0.818041 | 2.41E-52 | -1.69E-46 |
| MS.gene050444 | MS.gene77842 | -0.845452 | 4.03E-59 | -1.69E-46 |
| MS.gene050496 | MS.gene77842 | -0.816049 | 6.76E-52 | -1.69E-46 |
| MS.gene050504 | MS.gene77842 | -0.840633 | 7.73E-58 | -1.69E-46 |
| MS.gene050612 | MS.gene77842 | -0.840634 | 7.72E-58 | -1.69E-46 |
| MS.gene050675 | MS.gene77842 | -0.831201 | 1.91E-55 | -1.69E-46 |
| MS.gene050699 | MS.gene77842 | -0.80299 | 4.32E-49 | -1.69E-46 |
| MS.gene05079 | MS.gene77842 | 0.833993 | 3.88E-56 | -1.69E-46 |
| MS.gene050809 | MS.gene77842 | 0.848984 | 4.32E-60 | -1.69E-46 |
| MS.gene05080 | MS.gene77842 | -0.818448 | 1.95E-52 | -1.69E-46 |
| MS.gene050868 | MS.gene77842 | -0.838182 | 3.35E-57 | -1.69E-46 |
| MS.gene050871 | MS.gene77842 | -0.836779 | 7.66E-57 | -1.69E-46 |
| MS.gene051044 | MS.gene77842 | 0.823887 | 1.09E-53 | -1.69E-46 |
| MS.gene05104 | MS.gene77842 | 0.833154 | 6.28E-56 | -1.69E-46 |
| MS.gene051138 | MS.gene77842 | 0.840596 | 7.90E-58 | -1.69E-46 |
| MS.gene051268 | MS.gene77842 | -0.81275 | 3.62E-51 | -1.69E-46 |
| MS.gene051366 | MS.gene77842 | 0.813825 | 2.10E-51 | -1.69E-46 |
| MS.gene051651 | MS.gene77842 | 0.807725 | 4.39E-50 | -1.69E-46 |
| MS.gene051810 | MS.gene77842 | -0.813477 | 2.51E-51 | -1.69E-46 |
| MS.gene051858 | MS.gene77842 | -0.802782 | 4.77E-49 | -1.69E-46 |
| MS.gene051874 | MS.gene77842 | -0.818669 | 1.74E-52 | -1.69E-46 |
| MS.gene051949 | MS.gene77842 | -0.822424 | 2.39E-53 | -1.69E-46 |
| MS.gene052129 | MS.gene77842 | 0.841879 | 3.64E-58 | -1.69E-46 |
| MS.gene05240 | MS.gene77842 | 0.808601 | 2.86E-50 | -1.69E-46 |
| MS.gene052702 | MS.gene77842 | 0.801857 | 7.39E-49 | -1.69E-46 |
| MS.gene052805 | MS.gene77842 | 0.803225 | 3.86E-49 | -1.69E-46 |
| MS.gene052870 | MS.gene77842 | -0.813269 | 2.79E-51 | -1.69E-46 |
| MS.gene052872 | MS.gene77842 | -0.828605 | 8.19E-55 | -1.69E-46 |
| MS.gene052966 | MS.gene77842 | -0.802069 | 6.68E-49 | -1.69E-46 |
| MS.gene053203 | MS.gene77842 | -0.814741 | 1.32E-51 | -1.69E-46 |
| MS.gene053420 | MS.gene77842 | 0.824004 | 1.02E-53 | -1.69E-46 |
| MS.gene053479 | MS.gene77842 | -0.817591 | 3.05E-52 | -1.69E-46 |
| MS.gene053488 | MS.gene77842 | 0.807757 | 4.33E-50 | -1.69E-46 |
| MS.gene053561 | MS.gene77842 | 0.813861 | 2.07E-51 | -1.69E-46 |
| MS.gene053632 | MS.gene77842 | -0.822811 | 1.94E-53 | -1.69E-46 |
| MS.gene053824 | MS.gene77842 | -0.811759 | 5.96E-51 | -1.69E-46 |
| MS.gene053916 | MS.gene77842 | -0.806874 | 6.65E-50 | -1.69E-46 |
| MS.gene054290 | MS.gene77842 | 0.858474 | 8.04E-63 | -1.69E-46 |
| MS.gene054642 | MS.gene77842 | -0.825063 | 5.75E-54 | -1.69E-46 |
| MS.gene054706 | MS.gene77842 | 0.843982 | 1.00E-58 | -1.69E-46 |
| MS.gene05470 | MS.gene77842 | -0.800482 | 1.41E-48 | -1.69E-46 |
| MS.gene054884 | MS.gene77842 | 0.800076 | 1.71E-48 | -1.69E-46 |
| MS.gene054954 | MS.gene77842 | -0.815988 | 6.97E-52 | -1.69E-46 |
| MS.gene054959 | MS.gene77842 | 0.836172 | 1.09E-56 | -1.69E-46 |
| MS.gene055206 | MS.gene77842 | -0.814252 | 1.69E-51 | -1.69E-46 |
| MS.gene055362 | MS.gene77842 | -0.812182 | 4.82E-51 | -1.69E-46 |
| MS.gene055502 | MS.gene77842 | -0.837884 | 3.99E-57 | -1.69E-46 |
| MS.gene055577 | MS.gene77842 | -0.862721 | 4.15E-64 | -1.69E-46 |
| MS.gene055748 | MS.gene77842 | -0.820614 | 6.25E-53 | -1.69E-46 |
| MS.gene055750 | MS.gene77842 | -0.80008 | 1.70E-48 | -1.69E-46 |
| MS.gene055751 | MS.gene77842 | -0.823007 | 1.75E-53 | -1.69E-46 |
| MS.gene05589 | MS.gene77842 | -0.814049 | 1.88E-51 | -1.69E-46 |
| MS.gene055941 | MS.gene77842 | -0.811 | 8.71E-51 | -1.69E-46 |
| MS.gene055942 | MS.gene77842 | 0.815959 | 7.08E-52 | -1.69E-46 |
| MS.gene056224 | MS.gene77842 | 0.806705 | 7.22E-50 | -1.69E-46 |
| MS.gene056359 | MS.gene77842 | 0.802681 | 5.00E-49 | -1.69E-46 |
| MS.gene056387 | MS.gene77842 | -0.804917 | 1.72E-49 | -1.69E-46 |
| MS.gene056504 | MS.gene77842 | -0.8218 | 3.33E-53 | -1.69E-46 |
| MS.gene056510 | MS.gene77842 | -0.803494 | 3.39E-49 | -1.69E-46 |
| MS.gene056590 | MS.gene77842 | 0.811016 | 8.64E-51 | -1.69E-46 |
| MS.gene056591 | MS.gene77842 | 0.814103 | 1.83E-51 | -1.69E-46 |
| MS.gene056657 | MS.gene77842 | -0.815575 | 8.62E-52 | -1.69E-46 |
| MS.gene056856 | MS.gene77842 | 0.871296 | 7.62E-67 | -1.69E-46 |
| MS.gene056857 | MS.gene77842 | 0.863446 | 2.48E-64 | -1.69E-46 |
| MS.gene056946 | MS.gene77842 | -0.802272 | 6.07E-49 | -1.69E-46 |
| MS.gene057544 | MS.gene77842 | 0.804224 | 2.39E-49 | -1.69E-46 |
| MS.gene057857 | MS.gene77842 | -0.815381 | 9.52E-52 | -1.69E-46 |
| MS.gene057926 | MS.gene77842 | -0.803576 | 3.26E-49 | -1.69E-46 |
| MS.gene058068 | MS.gene77842 | 0.808509 | 2.99E-50 | -1.69E-46 |
| MS.gene058099 | MS.gene77842 | 0.820313 | 7.33E-53 | -1.69E-46 |
| MS.gene058117 | MS.gene77842 | 0.808872 | 2.50E-50 | -1.69E-46 |
| MS.gene058158 | MS.gene77842 | 0.828154 | 1.05E-54 | -1.69E-46 |
| MS.gene058268 | MS.gene77842 | 0.828933 | 6.83E-55 | -1.69E-46 |
| MS.gene058269 | MS.gene77842 | 0.818181 | 2.24E-52 | -1.69E-46 |
| MS.gene05837 | MS.gene77842 | -0.801018 | 1.10E-48 | -1.69E-46 |
| MS.gene058419 | MS.gene77842 | -0.814288 | 1.66E-51 | -1.69E-46 |
| MS.gene058544 | MS.gene77842 | -0.819482 | 1.14E-52 | -1.69E-46 |
| MS.gene058603 | MS.gene77842 | 0.826004 | 3.44E-54 | -1.69E-46 |
| MS.gene058723 | MS.gene77842 | -0.81707 | 3.99E-52 | -1.69E-46 |
| MS.gene058773 | MS.gene77842 | -0.825125 | 5.56E-54 | -1.69E-46 |
| MS.gene058838 | MS.gene77842 | -0.806887 | 6.61E-50 | -1.69E-46 |
| MS.gene059022 | MS.gene77842 | -0.828797 | 7.36E-55 | -1.69E-46 |
| MS.gene059023 | MS.gene77842 | -0.831047 | 2.08E-55 | -1.69E-46 |
| MS.gene05913 | MS.gene77842 | -0.804003 | 2.66E-49 | -1.69E-46 |
| MS.gene05926 | MS.gene77842 | 0.802581 | 5.24E-49 | -1.69E-46 |
| MS.gene059315 | MS.gene77842 | 0.813394 | 2.62E-51 | -1.69E-46 |
| MS.gene059677 | MS.gene77842 | -0.831214 | 1.90E-55 | -1.69E-46 |
| MS.gene059682 | MS.gene77842 | 0.807552 | 4.78E-50 | -1.69E-46 |
| MS.gene059699 | MS.gene77842 | 0.833235 | 5.99E-56 | -1.69E-46 |
| MS.gene059701 | MS.gene77842 | 0.818681 | 1.73E-52 | -1.69E-46 |
| MS.gene059703 | MS.gene77842 | 0.838247 | 3.22E-57 | -1.69E-46 |
| MS.gene059718 | MS.gene77842 | -0.825717 | 4.03E-54 | -1.69E-46 |
| MS.gene059865 | MS.gene77842 | -0.826906 | 2.10E-54 | -1.69E-46 |
| MS.gene059902 | MS.gene77842 | -0.803797 | 2.94E-49 | -1.69E-46 |
| MS.gene060341 | MS.gene77842 | -0.805807 | 1.12E-49 | -1.69E-46 |
| MS.gene060405 | MS.gene77842 | 0.831725 | 1.42E-55 | -1.69E-46 |
| MS.gene060703 | MS.gene77842 | -0.802524 | 5.39E-49 | -1.69E-46 |
| MS.gene060762 | MS.gene77842 | -0.833266 | 5.89E-56 | -1.69E-46 |
| MS.gene060982 | MS.gene77842 | -0.817307 | 3.53E-52 | -1.69E-46 |
| MS.gene061150 | MS.gene77842 | -0.805603 | 1.23E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene77842.t1 | MTR_3g028040 | 76.923 | 481 | 88 | 1 | 1 | 481 | 782 | 1239 | 0.0 | 710 |
| MS.gene77842.t1 | MTR_3g033860 | 74.428 | 481 | 100 | 1 | 1 | 481 | 782 | 1239 | 0.0 | 686 |
| MS.gene77842.t1 | MTR_3g034380 | 75.260 | 481 | 96 | 1 | 1 | 481 | 781 | 1238 | 0.0 | 681 |
| MS.gene77842.t1 | MTR_3g034430 | 78.423 | 482 | 103 | 1 | 1 | 481 | 782 | 1263 | 0.0 | 656 |
| MS.gene77842.t1 | MTR_3g034460 | 71.933 | 481 | 94 | 2 | 1 | 481 | 766 | 1205 | 0.0 | 612 |
| MS.gene77842.t1 | MTR_4g050410 | 57.025 | 484 | 197 | 6 | 1 | 481 | 780 | 1255 | 6.65e-161 | 490 |
| MS.gene77842.t1 | MTR_3g032200 | 54.713 | 488 | 206 | 8 | 1 | 483 | 785 | 1262 | 9.55e-158 | 482 |
| MS.gene77842.t1 | MTR_3g031940 | 55.533 | 488 | 204 | 7 | 1 | 483 | 785 | 1264 | 1.71e-155 | 476 |
| MS.gene77842.t1 | MTR_3g435720 | 55.992 | 484 | 201 | 7 | 1 | 481 | 782 | 1256 | 3.22e-153 | 470 |
| MS.gene77842.t1 | MTR_3g032960 | 55.670 | 485 | 202 | 7 | 1 | 481 | 782 | 1257 | 2.44e-152 | 468 |
| MS.gene77842.t1 | MTR_3g033110 | 54.234 | 496 | 215 | 6 | 1 | 493 | 761 | 1247 | 3.78e-151 | 464 |
| MS.gene77842.t1 | MTR_3g435740 | 55.579 | 484 | 203 | 7 | 1 | 481 | 826 | 1300 | 5.23e-151 | 465 |
| MS.gene77842.t1 | MTR_3g035940 | 57.753 | 445 | 182 | 4 | 1 | 444 | 783 | 1222 | 1.33e-150 | 462 |
| MS.gene77842.t1 | MTR_0002s0110 | 57.079 | 445 | 185 | 4 | 1 | 444 | 783 | 1222 | 2.16e-150 | 462 |
| MS.gene77842.t1 | MTR_3g035480 | 57.079 | 445 | 185 | 4 | 1 | 444 | 783 | 1222 | 6.03e-150 | 462 |
| MS.gene77842.t1 | MTR_3g032760 | 56.405 | 484 | 199 | 8 | 1 | 481 | 781 | 1255 | 7.00e-149 | 458 |
| MS.gene77842.t1 | MTR_2g063777 | 52.479 | 484 | 218 | 6 | 1 | 481 | 779 | 1253 | 1.78e-147 | 454 |
| MS.gene77842.t1 | MTR_3g032370 | 54.316 | 475 | 204 | 7 | 1 | 471 | 780 | 1245 | 8.07e-147 | 454 |
| MS.gene77842.t1 | MTR_3g030960 | 56.025 | 473 | 197 | 6 | 1 | 470 | 782 | 1246 | 5.90e-146 | 451 |
| MS.gene77842.t1 | MTR_3g032800 | 58.222 | 450 | 179 | 5 | 1 | 447 | 782 | 1225 | 8.78e-146 | 450 |
| MS.gene77842.t1 | MTR_3g035960 | 57.743 | 452 | 179 | 6 | 1 | 444 | 781 | 1228 | 1.17e-143 | 444 |
| MS.gene77842.t1 | MTR_0002s0090 | 56.688 | 471 | 192 | 5 | 1 | 470 | 782 | 1241 | 1.22e-143 | 444 |
| MS.gene77842.t1 | MTR_3g035500 | 56.688 | 471 | 192 | 5 | 1 | 470 | 782 | 1241 | 1.22e-143 | 444 |
| MS.gene77842.t1 | MTR_1g008240 | 51.845 | 515 | 216 | 5 | 1 | 493 | 764 | 1268 | 4.23e-143 | 443 |
| MS.gene77842.t1 | MTR_3g030980 | 54.852 | 474 | 204 | 5 | 1 | 471 | 782 | 1248 | 1.26e-142 | 443 |
| MS.gene77842.t1 | MTR_3g032500 | 54.641 | 474 | 204 | 6 | 1 | 470 | 786 | 1252 | 2.12e-140 | 436 |
| MS.gene77842.t1 | MTR_3g033130 | 50.471 | 531 | 193 | 10 | 1 | 488 | 726 | 1229 | 7.73e-136 | 424 |
| MS.gene77842.t1 | MTR_3g034650 | 48.337 | 511 | 187 | 12 | 1 | 488 | 289 | 745 | 1.71e-133 | 405 |
| MS.gene77842.t1 | MTR_3g036050 | 47.736 | 530 | 235 | 9 | 1 | 507 | 393 | 903 | 2.90e-129 | 400 |
| MS.gene77842.t1 | MTR_3g033380 | 50.193 | 518 | 205 | 8 | 1 | 493 | 786 | 1275 | 2.93e-128 | 404 |
| MS.gene77842.t1 | MTR_8g030860 | 53.864 | 440 | 191 | 6 | 1 | 437 | 788 | 1218 | 3.17e-125 | 395 |
| MS.gene77842.t1 | MTR_0083s0120 | 50.533 | 469 | 175 | 5 | 1 | 467 | 331 | 744 | 2.31e-123 | 381 |
| MS.gene77842.t1 | MTR_3g032150 | 48.945 | 474 | 179 | 8 | 1 | 471 | 780 | 1193 | 7.08e-121 | 384 |
| MS.gene77842.t1 | MTR_3g033240 | 46.888 | 482 | 187 | 9 | 1 | 481 | 785 | 1198 | 1.50e-112 | 361 |
| MS.gene77842.t1 | MTR_8g106550 | 44.835 | 455 | 181 | 7 | 10 | 459 | 705 | 1094 | 1.91e-93 | 308 |
| MS.gene77842.t1 | MTR_3g032110 | 40.340 | 471 | 217 | 11 | 1 | 444 | 830 | 1263 | 4.30e-85 | 286 |
| MS.gene77842.t1 | MTR_3g032340 | 39.915 | 471 | 219 | 11 | 1 | 444 | 833 | 1266 | 1.29e-83 | 282 |
| MS.gene77842.t1 | MTR_0002s0120 | 56.371 | 259 | 109 | 3 | 1 | 258 | 566 | 821 | 5.50e-82 | 272 |
| MS.gene77842.t1 | MTR_0137s0070 | 35.223 | 494 | 252 | 9 | 1 | 467 | 209 | 661 | 1.34e-67 | 230 |
| MS.gene77842.t1 | MTR_3g014080 | 35.425 | 494 | 251 | 9 | 1 | 467 | 791 | 1243 | 6.01e-66 | 231 |
| MS.gene77842.t1 | MTR_3g014040 | 37.838 | 481 | 241 | 11 | 1 | 467 | 776 | 1212 | 7.59e-65 | 228 |
| MS.gene77842.t1 | MTR_4g019360 | 34.517 | 507 | 229 | 12 | 1 | 481 | 707 | 1136 | 1.21e-64 | 228 |
| MS.gene77842.t1 | MTR_3g014510 | 33.464 | 511 | 252 | 15 | 10 | 488 | 859 | 1313 | 2.88e-63 | 224 |
| MS.gene77842.t1 | MTR_3g007190 | 33.974 | 468 | 219 | 11 | 1 | 444 | 641 | 1042 | 1.27e-61 | 218 |
| MS.gene77842.t1 | MTR_6g084540 | 43.279 | 305 | 87 | 3 | 177 | 481 | 1 | 219 | 2.00e-61 | 201 |
| MS.gene77842.t1 | MTR_0137s0010 | 36.943 | 471 | 227 | 11 | 1 | 467 | 330 | 734 | 7.00e-60 | 210 |
| MS.gene77842.t1 | MTR_3g435220 | 33.333 | 513 | 252 | 12 | 1 | 488 | 743 | 1190 | 1.73e-59 | 213 |
| MS.gene77842.t1 | MTR_3g020890 | 34.461 | 473 | 254 | 10 | 1 | 443 | 774 | 1220 | 3.83e-58 | 209 |
| MS.gene77842.t1 | MTR_8g446950 | 34.051 | 511 | 243 | 15 | 1 | 483 | 808 | 1252 | 3.86e-58 | 209 |
| MS.gene77842.t1 | MTR_3g014320 | 35.294 | 510 | 247 | 18 | 10 | 483 | 871 | 1333 | 2.36e-57 | 207 |
| MS.gene77842.t1 | MTR_3g014320 | 29.247 | 571 | 241 | 19 | 1 | 445 | 783 | 1316 | 5.29e-33 | 134 |
| MS.gene77842.t1 | MTR_0137s0070 | 32.114 | 492 | 235 | 8 | 1 | 467 | 209 | 626 | 6.43e-57 | 200 |
| MS.gene77842.t1 | MTR_5g037590 | 33.333 | 516 | 239 | 13 | 1 | 488 | 742 | 1180 | 6.81e-57 | 205 |
| MS.gene77842.t1 | MTR_3g014080 | 32.317 | 492 | 234 | 8 | 1 | 467 | 791 | 1208 | 4.99e-56 | 202 |
| MS.gene77842.t1 | MTR_3g011620 | 32.370 | 519 | 239 | 13 | 1 | 488 | 789 | 1226 | 1.30e-55 | 201 |
| MS.gene77842.t1 | MTR_0603s0010 | 34.255 | 470 | 229 | 11 | 1 | 444 | 845 | 1260 | 6.08e-55 | 199 |
| MS.gene77842.t1 | MTR_3g033080 | 57.865 | 178 | 73 | 1 | 1 | 178 | 785 | 960 | 1.09e-54 | 198 |
| MS.gene77842.t1 | MTR_1g045960 | 34.461 | 473 | 238 | 13 | 1 | 447 | 753 | 1179 | 1.18e-54 | 199 |
| MS.gene77842.t1 | MTR_1g037610 | 35.220 | 477 | 246 | 14 | 4 | 445 | 880 | 1328 | 5.93e-53 | 194 |
| MS.gene77842.t1 | MTR_3g014460 | 35.189 | 449 | 226 | 14 | 32 | 444 | 1 | 420 | 1.22e-51 | 182 |
| MS.gene77842.t1 | MTR_3g031860 | 53.403 | 191 | 82 | 3 | 300 | 490 | 1 | 184 | 2.59e-50 | 174 |
| MS.gene77842.t1 | MTR_7g078790 | 60.870 | 138 | 54 | 0 | 1 | 138 | 769 | 906 | 1.29e-48 | 180 |
| MS.gene77842.t1 | MTR_3g436140 | 55.914 | 186 | 73 | 3 | 177 | 361 | 1 | 178 | 1.98e-48 | 166 |
| MS.gene77842.t1 | MTR_3g014390 | 34.152 | 448 | 239 | 11 | 18 | 444 | 882 | 1294 | 1.48e-47 | 178 |
| MS.gene77842.t1 | MTR_3g014360 | 31.538 | 520 | 252 | 18 | 1 | 483 | 830 | 1282 | 2.71e-43 | 165 |
| MS.gene77842.t1 | MTR_3g020620 | 38.628 | 277 | 123 | 5 | 1 | 276 | 933 | 1163 | 7.83e-42 | 160 |
| MS.gene77842.t1 | MTR_2g014840 | 31.263 | 467 | 273 | 9 | 1 | 443 | 781 | 1223 | 7.50e-40 | 155 |
| MS.gene77842.t1 | MTR_8g038590 | 32.035 | 462 | 250 | 14 | 1 | 439 | 792 | 1212 | 4.25e-37 | 147 |
| MS.gene77842.t1 | MTR_2g039090 | 31.130 | 469 | 254 | 18 | 1 | 442 | 771 | 1197 | 4.67e-37 | 146 |
| MS.gene77842.t1 | MTR_3g022940 | 31.111 | 450 | 206 | 12 | 1 | 445 | 771 | 1121 | 3.20e-36 | 144 |
| MS.gene77842.t1 | MTR_2g038760 | 29.594 | 517 | 279 | 15 | 1 | 494 | 798 | 1252 | 5.24e-35 | 140 |
| MS.gene77842.t1 | MTR_3g071130 | 31.562 | 320 | 172 | 8 | 1 | 317 | 765 | 1040 | 6.54e-35 | 140 |
| MS.gene77842.t1 | MTR_3g435210 | 34.242 | 330 | 157 | 9 | 202 | 506 | 651 | 945 | 1.29e-34 | 139 |
| MS.gene77842.t1 | MTR_3g435210 | 28.571 | 385 | 189 | 16 | 1 | 347 | 573 | 909 | 9.21e-15 | 77.8 |
| MS.gene77842.t1 | MTR_3g071070 | 31.875 | 320 | 171 | 8 | 1 | 317 | 560 | 835 | 7.76e-34 | 136 |
| MS.gene77842.t1 | MTR_2g038930 | 29.400 | 517 | 280 | 16 | 1 | 494 | 624 | 1078 | 1.43e-33 | 136 |
| MS.gene77842.t1 | MTR_0425s0020 | 29.264 | 516 | 266 | 17 | 1 | 481 | 792 | 1243 | 5.48e-33 | 134 |
| MS.gene77842.t1 | MTR_2g038900 | 29.207 | 517 | 281 | 16 | 1 | 494 | 787 | 1241 | 3.27e-32 | 132 |
| MS.gene77842.t1 | MTR_3g022870 | 29.888 | 445 | 208 | 12 | 1 | 440 | 735 | 1080 | 8.18e-32 | 130 |
| MS.gene77842.t1 | MTR_3g022870 | 29.888 | 445 | 208 | 12 | 1 | 440 | 771 | 1116 | 9.29e-32 | 130 |
| MS.gene77842.t1 | MTR_6g084550 | 66.981 | 106 | 34 | 1 | 1 | 106 | 767 | 871 | 1.29e-31 | 130 |
| MS.gene77842.t1 | MTR_0005s0200 | 29.942 | 344 | 198 | 8 | 1 | 338 | 797 | 1103 | 1.35e-30 | 127 |
| MS.gene77842.t1 | MTR_5g095910 | 29.487 | 468 | 269 | 14 | 1 | 443 | 784 | 1215 | 4.40e-30 | 125 |
| MS.gene77842.t1 | MTR_3g022060 | 29.376 | 497 | 217 | 17 | 1 | 490 | 673 | 1042 | 4.43e-30 | 125 |
| MS.gene77842.t1 | MTR_2g014730 | 29.128 | 436 | 246 | 12 | 1 | 430 | 707 | 1085 | 5.72e-30 | 125 |
| MS.gene77842.t1 | MTR_3g022600 | 30.515 | 485 | 225 | 16 | 1 | 431 | 799 | 1225 | 3.62e-29 | 122 |
| MS.gene77842.t1 | MTR_3g033980 | 43.979 | 191 | 79 | 5 | 298 | 481 | 25 | 194 | 3.80e-29 | 114 |
| MS.gene77842.t1 | MTR_3g019000 | 29.367 | 395 | 195 | 12 | 1 | 351 | 782 | 1136 | 3.12e-28 | 120 |
| MS.gene77842.t1 | MTR_3g019000 | 27.508 | 309 | 167 | 11 | 183 | 480 | 880 | 1142 | 1.25e-13 | 74.3 |
| MS.gene77842.t1 | MTR_3g021400 | 29.385 | 439 | 214 | 13 | 8 | 445 | 771 | 1114 | 9.78e-28 | 118 |
| MS.gene77842.t1 | MTR_3g023030 | 27.721 | 487 | 223 | 14 | 1 | 481 | 786 | 1149 | 3.17e-27 | 117 |
| MS.gene77842.t1 | MTR_3g023030 | 27.721 | 487 | 223 | 14 | 1 | 481 | 752 | 1115 | 3.88e-27 | 116 |
| MS.gene77842.t1 | MTR_3g024460 | 28.933 | 356 | 193 | 11 | 1 | 311 | 387 | 727 | 2.70e-26 | 113 |
| MS.gene77842.t1 | MTR_3g027250 | 29.752 | 363 | 195 | 10 | 1 | 318 | 770 | 1117 | 3.86e-26 | 113 |
| MS.gene77842.t1 | MTR_8g038570 | 29.883 | 512 | 264 | 19 | 1 | 488 | 799 | 1239 | 5.45e-26 | 113 |
| MS.gene77842.t1 | MTR_3g022400 | 30.564 | 337 | 193 | 11 | 1 | 315 | 768 | 1085 | 1.27e-25 | 112 |
| MS.gene77842.t1 | MTR_3g022400 | 27.566 | 341 | 163 | 11 | 174 | 445 | 765 | 1090 | 2.24e-14 | 76.6 |
| MS.gene77842.t1 | MTR_3g070590 | 30.420 | 286 | 152 | 8 | 35 | 317 | 757 | 998 | 1.73e-25 | 111 |
| MS.gene77842.t1 | MTR_3g022730 | 30.657 | 411 | 240 | 18 | 57 | 439 | 11 | 404 | 1.77e-25 | 109 |
| MS.gene77842.t1 | MTR_3g022730 | 28.608 | 388 | 180 | 10 | 84 | 465 | 11 | 307 | 3.46e-20 | 93.6 |
| MS.gene77842.t1 | MTR_3g022230 | 30.174 | 517 | 267 | 20 | 1 | 468 | 778 | 1249 | 3.29e-25 | 110 |
| MS.gene77842.t1 | MTR_3g022230 | 26.275 | 510 | 272 | 20 | 6 | 481 | 1150 | 1589 | 9.62e-15 | 78.2 |
| MS.gene77842.t1 | MTR_3g022230 | 27.701 | 509 | 268 | 21 | 6 | 465 | 1015 | 1472 | 3.74e-12 | 69.7 |
| MS.gene77842.t1 | MTR_3g071080 | 30.519 | 308 | 182 | 6 | 160 | 442 | 89 | 389 | 6.60e-25 | 107 |
| MS.gene77842.t1 | MTR_3g071040 | 30.519 | 308 | 182 | 6 | 160 | 442 | 89 | 389 | 6.60e-25 | 107 |
| MS.gene77842.t1 | MTR_3g071010 | 30.519 | 308 | 182 | 6 | 160 | 442 | 98 | 398 | 6.85e-25 | 107 |
| MS.gene77842.t1 | MTR_3g019040 | 28.495 | 372 | 175 | 11 | 1 | 299 | 779 | 1132 | 1.42e-24 | 108 |
| MS.gene77842.t1 | MTR_3g019040 | 25.122 | 410 | 234 | 16 | 101 | 480 | 775 | 1141 | 6.11e-11 | 65.9 |
| MS.gene77842.t1 | MTR_3g034010 | 54.348 | 92 | 42 | 0 | 176 | 267 | 5 | 96 | 2.11e-24 | 97.8 |
| MS.gene77842.t1 | MTR_3g027470 | 30.293 | 307 | 182 | 12 | 14 | 306 | 678 | 966 | 2.42e-24 | 107 |
| MS.gene77842.t1 | MTR_3g022400 | 29.363 | 361 | 194 | 11 | 1 | 315 | 768 | 1113 | 3.71e-24 | 107 |
| MS.gene77842.t1 | MTR_3g022400 | 36.774 | 155 | 87 | 3 | 295 | 445 | 971 | 1118 | 1.85e-15 | 80.1 |
| MS.gene77842.t1 | MTR_3g027420 | 30.994 | 342 | 177 | 10 | 1 | 298 | 771 | 1097 | 1.87e-23 | 105 |
| MS.gene77842.t1 | MTR_3g022300 | 28.070 | 513 | 246 | 19 | 1 | 481 | 789 | 1210 | 4.01e-23 | 104 |
| MS.gene77842.t1 | MTR_7g021000 | 29.697 | 330 | 176 | 12 | 1 | 298 | 780 | 1085 | 4.05e-23 | 104 |
| MS.gene77842.t1 | MTR_3g022570 | 28.889 | 360 | 197 | 11 | 1 | 315 | 809 | 1154 | 6.75e-23 | 103 |
| MS.gene77842.t1 | MTR_3g022570 | 38.667 | 150 | 81 | 3 | 295 | 440 | 1012 | 1154 | 1.56e-15 | 80.5 |
| MS.gene77842.t1 | MTR_3g021330 | 35.622 | 233 | 121 | 7 | 1 | 215 | 348 | 569 | 1.43e-22 | 101 |
| MS.gene77842.t1 | MTR_3g021330 | 31.674 | 221 | 119 | 6 | 248 | 445 | 364 | 575 | 4.83e-16 | 81.3 |
| MS.gene77842.t1 | MTR_3g070650 | 30.742 | 283 | 165 | 6 | 184 | 442 | 195 | 470 | 1.57e-22 | 101 |
| MS.gene77842.t1 | MTR_1g047800 | 28.267 | 329 | 167 | 12 | 1 | 320 | 775 | 1043 | 4.63e-21 | 97.8 |
| MS.gene77842.t1 | MTR_3g022790 | 28.709 | 519 | 266 | 23 | 1 | 465 | 777 | 1245 | 2.39e-20 | 95.5 |
| MS.gene77842.t1 | MTR_3g022790 | 30.435 | 414 | 222 | 18 | 55 | 437 | 960 | 1338 | 4.32e-16 | 82.4 |
| MS.gene77842.t1 | MTR_3g022790 | 28.470 | 281 | 163 | 12 | 57 | 313 | 1075 | 1341 | 4.76e-15 | 79.0 |
| MS.gene77842.t1 | MTR_3g022130 | 28.116 | 345 | 186 | 11 | 1 | 299 | 760 | 1088 | 1.34e-19 | 93.2 |
| MS.gene77842.t1 | MTR_3g022590 | 29.723 | 397 | 175 | 14 | 52 | 440 | 126 | 426 | 1.55e-19 | 91.7 |
| MS.gene77842.t1 | MTR_3g018980 | 25.872 | 344 | 187 | 10 | 1 | 298 | 783 | 1104 | 2.63e-19 | 92.4 |
| MS.gene77842.t1 | MTR_3g018980 | 36.620 | 142 | 79 | 4 | 303 | 440 | 986 | 1120 | 1.60e-11 | 67.8 |
| MS.gene77842.t1 | MTR_3g021100 | 30.319 | 376 | 218 | 11 | 1 | 351 | 779 | 1135 | 3.44e-19 | 92.0 |
| MS.gene77842.t1 | MTR_3g021100 | 38.710 | 155 | 84 | 3 | 295 | 445 | 982 | 1129 | 1.42e-15 | 80.5 |
| MS.gene77842.t1 | MTR_3g021380 | 29.333 | 375 | 223 | 10 | 1 | 351 | 761 | 1117 | 1.31e-18 | 90.1 |
| MS.gene77842.t1 | MTR_3g021380 | 35.754 | 179 | 102 | 4 | 273 | 445 | 940 | 1111 | 3.12e-15 | 79.3 |
| MS.gene77842.t1 | MTR_3g021170 | 28.800 | 375 | 168 | 15 | 1 | 299 | 774 | 1125 | 4.94e-18 | 88.2 |
| MS.gene77842.t1 | MTR_3g021170 | 40.000 | 155 | 82 | 3 | 295 | 445 | 975 | 1122 | 5.70e-16 | 81.6 |
| MS.gene77842.t1 | MTR_3g022920 | 28.861 | 395 | 199 | 11 | 1 | 351 | 764 | 1120 | 9.18e-18 | 87.4 |
| MS.gene77842.t1 | MTR_3g022920 | 32.479 | 351 | 182 | 17 | 125 | 440 | 779 | 1109 | 7.33e-15 | 78.2 |
| MS.gene77842.t1 | MTR_3g027200 | 28.080 | 349 | 178 | 10 | 1 | 299 | 791 | 1116 | 1.33e-17 | 87.0 |
| MS.gene77842.t1 | MTR_3g025360 | 28.344 | 314 | 169 | 8 | 1 | 269 | 800 | 1102 | 1.64e-17 | 86.7 |
| MS.gene77842.t1 | MTR_1g023600 | 31.461 | 267 | 138 | 10 | 1 | 263 | 759 | 984 | 3.53e-17 | 85.5 |
| MS.gene77842.t1 | MTR_2g014720 | 28.852 | 305 | 154 | 7 | 33 | 336 | 669 | 911 | 5.07e-17 | 85.1 |
| MS.gene77842.t1 | MTR_3g032360 | 39.394 | 165 | 54 | 2 | 250 | 413 | 34 | 153 | 7.24e-17 | 78.6 |
| MS.gene77842.t1 | MTR_3g018930 | 28.531 | 354 | 182 | 12 | 3 | 307 | 792 | 1123 | 7.72e-17 | 84.7 |
| MS.gene77842.t1 | MTR_3g018930 | 27.384 | 409 | 230 | 17 | 105 | 489 | 789 | 1154 | 2.88e-15 | 79.7 |
| MS.gene77842.t1 | MTR_3g021340 | 27.865 | 384 | 188 | 11 | 9 | 347 | 773 | 1112 | 1.32e-16 | 84.0 |
| MS.gene77842.t1 | MTR_3g021340 | 39.355 | 155 | 83 | 3 | 295 | 445 | 968 | 1115 | 4.46e-15 | 79.0 |
| MS.gene77842.t1 | MTR_0005s0210 | 31.330 | 233 | 128 | 5 | 194 | 401 | 202 | 427 | 1.43e-16 | 82.4 |
| MS.gene77842.t1 | MTR_3g035810 | 38.060 | 134 | 74 | 2 | 1 | 134 | 755 | 879 | 4.24e-16 | 82.0 |
| MS.gene77842.t1 | MTR_8g039260 | 41.304 | 138 | 74 | 4 | 8 | 143 | 289 | 421 | 6.70e-16 | 80.9 |
| MS.gene77842.t1 | MTR_3g035815 | 39.216 | 102 | 62 | 0 | 344 | 445 | 1 | 102 | 7.40e-16 | 74.3 |
| MS.gene77842.t1 | MTR_2g060700 | 34.043 | 141 | 84 | 2 | 6 | 140 | 526 | 663 | 8.30e-16 | 80.9 |
| MS.gene77842.t1 | MTR_3g022810 | 41.322 | 121 | 54 | 4 | 10 | 128 | 93 | 198 | 9.51e-16 | 79.0 |
| MS.gene77842.t1 | MTR_3g032140 | 38.788 | 165 | 55 | 2 | 250 | 413 | 34 | 153 | 1.28e-15 | 75.1 |
| MS.gene77842.t1 | MTR_5g071823 | 26.198 | 313 | 163 | 12 | 9 | 320 | 768 | 1013 | 2.69e-15 | 79.7 |
| MS.gene77842.t1 | MTR_5g071850 | 26.198 | 313 | 163 | 12 | 9 | 320 | 768 | 1013 | 2.69e-15 | 79.7 |
| MS.gene77842.t1 | MTR_3g018970 | 32.271 | 251 | 126 | 8 | 1 | 248 | 237 | 446 | 3.39e-15 | 78.6 |
| MS.gene77842.t1 | MTR_4g055630 | 26.911 | 327 | 173 | 10 | 1 | 325 | 765 | 1027 | 4.76e-15 | 79.0 |
| MS.gene77842.t1 | MTR_3g022240 | 37.705 | 122 | 66 | 2 | 1 | 122 | 114 | 225 | 2.78e-14 | 75.1 |
| MS.gene77842.t1 | MTR_1643s0010 | 37.410 | 139 | 74 | 4 | 1 | 138 | 118 | 244 | 1.13e-13 | 72.4 |
| MS.gene77842.t1 | MTR_5g071220 | 29.520 | 271 | 148 | 10 | 1 | 267 | 762 | 993 | 1.33e-13 | 74.3 |
| MS.gene77842.t1 | MTR_5g071220 | 29.520 | 271 | 148 | 10 | 1 | 267 | 762 | 993 | 1.34e-13 | 74.3 |
| MS.gene77842.t1 | MTR_1g022380 | 29.368 | 269 | 141 | 10 | 1 | 263 | 757 | 982 | 2.30e-13 | 73.6 |
| MS.gene77842.t1 | MTR_3g022740 | 38.462 | 117 | 63 | 2 | 1 | 117 | 480 | 587 | 3.71e-13 | 72.4 |
| MS.gene77842.t1 | MTR_3g018980 | 30.851 | 188 | 103 | 5 | 3 | 189 | 785 | 946 | 5.27e-13 | 72.4 |
| MS.gene77842.t1 | MTR_7g021000 | 48.000 | 75 | 34 | 1 | 1 | 75 | 780 | 849 | 7.81e-13 | 71.6 |
| MS.gene77842.t1 | MTR_5g072140 | 29.600 | 250 | 135 | 9 | 1 | 248 | 718 | 928 | 1.22e-12 | 71.2 |
| MS.gene77842.t1 | MTR_3g015260 | 27.446 | 368 | 188 | 13 | 1 | 349 | 784 | 1091 | 1.61e-12 | 70.9 |
| MS.gene77842.t1 | MTR_0267s0070 | 43.089 | 123 | 65 | 2 | 1 | 123 | 796 | 913 | 2.59e-12 | 70.5 |
| MS.gene77842.t1 | MTR_3g436130 | 64.444 | 45 | 16 | 0 | 1 | 45 | 146 | 190 | 3.51e-12 | 65.9 |
| MS.gene77842.t1 | MTR_3g023020 | 30.000 | 150 | 79 | 2 | 335 | 480 | 7 | 134 | 5.05e-12 | 64.3 |
| MS.gene77842.t1 | MTR_5g035280 | 26.480 | 321 | 190 | 10 | 1 | 317 | 767 | 1045 | 6.02e-12 | 68.9 |
| MS.gene77842.t1 | MTR_5g070960 | 25.312 | 320 | 169 | 12 | 1 | 318 | 764 | 1015 | 9.23e-12 | 68.2 |
| MS.gene77842.t1 | MTR_6g046550 | 25.348 | 359 | 206 | 12 | 1 | 348 | 326 | 633 | 3.09e-11 | 66.2 |
| MS.gene77842.t1 | MTR_3g015260 | 28.049 | 246 | 135 | 9 | 1 | 225 | 784 | 1008 | 3.41e-11 | 66.6 |
| MS.gene77842.t1 | MTR_5g072340 | 26.562 | 320 | 140 | 10 | 1 | 317 | 760 | 987 | 5.04e-11 | 65.9 |
| MS.gene77842.t1 | MTR_5g071670 | 30.396 | 227 | 115 | 7 | 1 | 223 | 751 | 938 | 7.41e-11 | 65.5 |
| MS.gene77842.t1 | MTR_6g079000 | 25.355 | 493 | 302 | 18 | 6 | 468 | 634 | 1090 | 9.09e-11 | 65.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene77842.t1 | AT3G14460 | 30.537 | 298 | 177 | 6 | 157 | 428 | 1090 | 1383 | 9.84e-23 | 103 |
| MS.gene77842.t1 | AT3G14460 | 38.333 | 120 | 67 | 3 | 1 | 118 | 786 | 900 | 3.55e-17 | 85.9 |
| MS.gene77842.t1 | AT3G14470 | 31.278 | 227 | 126 | 7 | 1 | 223 | 792 | 992 | 8.28e-20 | 94.0 |
| MS.gene77842.t1 | AT3G14470 | 31.278 | 227 | 126 | 7 | 1 | 223 | 792 | 992 | 8.28e-20 | 94.0 |
Find 110 sgRNAs with CRISPR-Local
Find 131 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATAGAAATTGTTTGTAATT+TGG | 0.148128 | 3.4:+25885315 | None:intergenic |
| ACTGCAGCTCAAAATCATTT+TGG | 0.173035 | 3.4:+25885777 | None:intergenic |
| AGGAAAATACACAAAGTATT+TGG | 0.210891 | 3.4:+25885455 | None:intergenic |
| ATAGAAATTGTTTGTAATTT+GGG | 0.211196 | 3.4:+25885316 | None:intergenic |
| GGAAGCCATTTCTTCCAATT+TGG | 0.241622 | 3.4:+25886096 | None:intergenic |
| AATAAAAGAAATAGATATTT+CGG | 0.248603 | 3.4:-25885905 | MS.gene77842:CDS |
| CTCCAAGAGCTTTGGATTGA+TGG | 0.261113 | 3.4:-25885538 | MS.gene77842:CDS |
| TGCAGCAAAGGGCGTAATTC+TGG | 0.272529 | 3.4:+25884868 | None:intergenic |
| CTCCAACTCTTGAGACTTCA+TGG | 0.277852 | 3.4:-25885751 | MS.gene77842:CDS |
| GAGCAATTACACATCGCTTT+TGG | 0.284566 | 3.4:-25885623 | MS.gene77842:CDS |
| CATAGTGACAACTCTAGTTT+TGG | 0.290243 | 3.4:+25885358 | None:intergenic |
| ACTTCTCGCAATCATGAATA+TGG | 0.291001 | 3.4:+25885671 | None:intergenic |
| GGCAAATTTCCCCTCAGTTC+AGG | 0.300456 | 3.4:+25886015 | None:intergenic |
| TTTATTTACAAATGTTTCTA+TGG | 0.305424 | 3.4:+25885978 | None:intergenic |
| TAGTGATATAAGGGCTTTAC+AGG | 0.315299 | 3.4:+25885435 | None:intergenic |
| ATATGCCAAATTGGAAGAAA+TGG | 0.318710 | 3.4:-25886101 | MS.gene77842:CDS |
| ATAAAAGAAATAGATATTTC+GGG | 0.332586 | 3.4:-25885904 | MS.gene77842:CDS |
| AGGTCTACCAACTTCTTTGC+AGG | 0.345365 | 3.4:-25885698 | MS.gene77842:CDS |
| CTCACTTTCCTCCTTTCCAC+TGG | 0.348839 | 3.4:-25885575 | MS.gene77842:CDS |
| TCCGTTGAGGTAGTGATATA+AGG | 0.355438 | 3.4:+25885425 | None:intergenic |
| TCTGAAATGAAACGCTTAGA+TGG | 0.357856 | 3.4:-25885127 | MS.gene77842:CDS |
| TTGGAGGGTTGAGGGGTGAT+AGG | 0.358697 | 3.4:+25885474 | None:intergenic |
| GAGGAAGGGAGATTGTCTTT+TGG | 0.366884 | 3.4:+25884965 | None:intergenic |
| AGGAAATATGTCATCTTGAA+TGG | 0.367226 | 3.4:+25886074 | None:intergenic |
| ATGAAACGCTTAGATGGAAA+TGG | 0.372226 | 3.4:-25885121 | MS.gene77842:CDS |
| TTCCTAAGCTCCAAGAGCTT+TGG | 0.381217 | 3.4:-25885546 | MS.gene77842:CDS |
| AAAAGGTTGAAATGAAGAAT+TGG | 0.391102 | 3.4:+25886152 | None:intergenic |
| CTTTCCTCCTTTCCACTGGA+TGG | 0.392413 | 3.4:-25885571 | MS.gene77842:CDS |
| TAAACGTTGTCCTCATTTGT+TGG | 0.403081 | 3.4:-25885959 | MS.gene77842:CDS |
| GATGCCGCTATTAATTGAAT+GGG | 0.406618 | 3.4:-25885272 | MS.gene77842:CDS |
| GTCAAGGACCTACGTATAAC+AGG | 0.408589 | 3.4:-25886231 | MS.gene77842:CDS |
| CTGAAAGAGAAGTAAGGCTT+TGG | 0.412175 | 3.4:+25885245 | None:intergenic |
| TTGTCAGCGGCTTGAGTCCT+TGG | 0.418834 | 3.4:-25885056 | MS.gene77842:CDS |
| ATCCAAAGCTCTTGGAGCTT+AGG | 0.427941 | 3.4:+25885544 | None:intergenic |
| TTTGGCAATGACTCAAGTCT+TGG | 0.434438 | 3.4:+25884983 | None:intergenic |
| CAAAGTATTTGGAGGGTTGA+GGG | 0.441110 | 3.4:+25885466 | None:intergenic |
| GATTGATGGTTGTAGCGGTC+TGG | 0.445418 | 3.4:-25885524 | MS.gene77842:CDS |
| ACAATTGGTCCAGAGTTCTA+TGG | 0.451302 | 3.4:-25886192 | MS.gene77842:CDS |
| AGATGCCGCTATTAATTGAA+TGG | 0.453985 | 3.4:-25885273 | MS.gene77842:CDS |
| ATGTCAATATTTGAGACAAT+TGG | 0.456871 | 3.4:-25886207 | MS.gene77842:CDS |
| AACCATCAATCCAAAGCTCT+TGG | 0.458100 | 3.4:+25885536 | None:intergenic |
| CTCAGCATCTTGAGAGAGGA+AGG | 0.458997 | 3.4:+25884950 | None:intergenic |
| GGAAATATGTCATCTTGAAT+GGG | 0.464465 | 3.4:+25886075 | None:intergenic |
| TATTGTTAACACCTTGTTGA+AGG | 0.464828 | 3.4:-25885197 | MS.gene77842:CDS |
| GTTAACCGTTGCAGTAGAAA+TGG | 0.465721 | 3.4:+25885832 | None:intergenic |
| ACAAAGTATTTGGAGGGTTG+AGG | 0.468276 | 3.4:+25885465 | None:intergenic |
| GGCGAATCGCTTTCAACAAA+CGG | 0.474846 | 3.4:+25885853 | None:intergenic |
| GATAATAATACCTGCAGCAA+AGG | 0.475641 | 3.4:+25884856 | None:intergenic |
| CCGTTGAGGTAGTGATATAA+GGG | 0.480768 | 3.4:+25885426 | None:intergenic |
| TCTATGGAAGAAAGATGGTT+AGG | 0.482524 | 3.4:+25885994 | None:intergenic |
| CCAGAGTTCTATGGCATGGT+TGG | 0.488006 | 3.4:-25886183 | MS.gene77842:CDS |
| AGAATTACGCCCTTTGCTGC+AGG | 0.489304 | 3.4:-25884866 | MS.gene77842:CDS |
| TTCTATGGCATGGTTGGAGG+AGG | 0.494506 | 3.4:-25886177 | MS.gene77842:CDS |
| AATCACCACCTACTCTTGAA+TGG | 0.500974 | 3.4:-25885936 | MS.gene77842:CDS |
| GAAGTTATCATTCATGCCTC+AGG | 0.502016 | 3.4:-25885653 | MS.gene77842:CDS |
| TACATTCTACAAAGACTCAA+TGG | 0.505342 | 3.4:-25885876 | MS.gene77842:CDS |
| GACCATGAAGTCTCAAGAGT+TGG | 0.505837 | 3.4:+25885749 | None:intergenic |
| CTCACTGCATTTCCAGTGGA+AGG | 0.513793 | 3.4:-25885718 | MS.gene77842:CDS |
| TGAAACGCTTAGATGGAAAT+GGG | 0.513937 | 3.4:-25885120 | MS.gene77842:CDS |
| GAGTTCTATGGCATGGTTGG+AGG | 0.519606 | 3.4:-25886180 | MS.gene77842:CDS |
| ATGTTTCTATGGAAGAAAGA+TGG | 0.525109 | 3.4:+25885989 | None:intergenic |
| ACAATTCTGAAAGAGAAGTA+AGG | 0.528929 | 3.4:+25885239 | None:intergenic |
| AAAATACACAAAGTATTTGG+AGG | 0.531313 | 3.4:+25885458 | None:intergenic |
| AGCCTCTCGAGGGATGGAAA+AGG | 0.533998 | 3.4:+25886135 | None:intergenic |
| AGGTAATTTGTTCTCTGCCA+AGG | 0.537489 | 3.4:+25885039 | None:intergenic |
| ATAATAATACCTGCAGCAAA+GGG | 0.552901 | 3.4:+25884857 | None:intergenic |
| TGGAGTGCCTGCAAAGAAGT+TGG | 0.556432 | 3.4:+25885691 | None:intergenic |
| AATTTCAGCCTCTCGAGGGA+TGG | 0.558235 | 3.4:+25886129 | None:intergenic |
| GAAATTGTTTGTAATTTGGG+AGG | 0.560791 | 3.4:+25885319 | None:intergenic |
| CCAACCATGCCATAGAACTC+TGG | 0.565977 | 3.4:+25886183 | None:intergenic |
| GTCCCTCACTGCATTTCCAG+TGG | 0.566505 | 3.4:-25885722 | MS.gene77842:CDS |
| GAAGGTAGTTGTCCTAGTGA+TGG | 0.567722 | 3.4:+25886255 | None:intergenic |
| ATTCGCCATTTCTACTGCAA+CGG | 0.577718 | 3.4:-25885837 | MS.gene77842:CDS |
| TGGTCCAGAGTTCTATGGCA+TGG | 0.578918 | 3.4:-25886187 | MS.gene77842:CDS |
| GAGGAGAGCCATTCAAGAGT+AGG | 0.579959 | 3.4:+25885928 | None:intergenic |
| GAGAGCCATTCAAGAGTAGG+TGG | 0.580213 | 3.4:+25885931 | None:intergenic |
| CTTTGGATTGATGGTTGTAG+CGG | 0.580505 | 3.4:-25885529 | MS.gene77842:CDS |
| CCCTTATATCACTACCTCAA+CGG | 0.583405 | 3.4:-25885426 | MS.gene77842:CDS |
| CATTCATGCCTCAGGAAACG+TGG | 0.593858 | 3.4:-25885645 | MS.gene77842:CDS |
| AAATACACAAAGTATTTGGA+GGG | 0.595466 | 3.4:+25885459 | None:intergenic |
| GAAGTTGGTAGACCTTCCAC+TGG | 0.599950 | 3.4:+25885706 | None:intergenic |
| AAAGTATTTGGAGGGTTGAG+GGG | 0.601920 | 3.4:+25885467 | None:intergenic |
| TATATCACTACCTCAACGGA+TGG | 0.603077 | 3.4:-25885422 | MS.gene77842:CDS |
| AGGACAACTACCTTCTGTCA+AGG | 0.603935 | 3.4:-25886247 | MS.gene77842:CDS |
| ATGTGATTGTCCTGAACTGA+GGG | 0.604621 | 3.4:-25886025 | MS.gene77842:CDS |
| CAAACTTTCAAGAGTGGTGA+GGG | 0.605336 | 3.4:+25885396 | None:intergenic |
| AAAACCATCCAGTGGAAAGG+AGG | 0.607066 | 3.4:+25885567 | None:intergenic |
| AGGAAAACCATCCAGTGGAA+AGG | 0.608490 | 3.4:+25885564 | None:intergenic |
| TTCCACTGGAAATGCAGTGA+GGG | 0.610913 | 3.4:+25885720 | None:intergenic |
| ACTGGAAATGCAGTGAGGGA+CGG | 0.616005 | 3.4:+25885724 | None:intergenic |
| GTGAGGGTGTCCATCCGTTG+AGG | 0.616163 | 3.4:+25885412 | None:intergenic |
| ATGCCGCTATTAATTGAATG+GGG | 0.617294 | 3.4:-25885271 | MS.gene77842:CDS |
| GGTGGTGATTCCAACAAATG+AGG | 0.619345 | 3.4:+25885949 | None:intergenic |
| TAATTGCTCCACGTTTCCTG+AGG | 0.619665 | 3.4:+25885637 | None:intergenic |
| CTAGAGTTGTCACTATGTGA+AGG | 0.625314 | 3.4:-25885352 | MS.gene77842:CDS |
| AAGCAACTGCTCCTTCAACA+AGG | 0.628605 | 3.4:+25885186 | None:intergenic |
| AAAGCTCAGCATCTTGAGAG+AGG | 0.632503 | 3.4:+25884946 | None:intergenic |
| CAGATACAAACTTTCAAGAG+TGG | 0.633569 | 3.4:+25885390 | None:intergenic |
| TTGACTTTACACAGTAGCTG+TGG | 0.638337 | 3.4:-25885598 | MS.gene77842:CDS |
| ATACGTAGGTCCTTGACAGA+AGG | 0.642937 | 3.4:+25886237 | None:intergenic |
| ACAAACTTTCAAGAGTGGTG+AGG | 0.647000 | 3.4:+25885395 | None:intergenic |
| TGTGTGAGACTTCCATCACT+AGG | 0.651240 | 3.4:-25886267 | MS.gene77842:CDS |
| TCAGCATCTTGAGAGAGGAA+GGG | 0.656170 | 3.4:+25884951 | None:intergenic |
| AGCTTAGGAAAACCATCCAG+TGG | 0.659284 | 3.4:+25885559 | None:intergenic |
| AAACCCCATTCAATTAATAG+CGG | 0.668440 | 3.4:+25885268 | None:intergenic |
| TAAGTGTTTCAAGAGATGAG+AGG | 0.680727 | 3.4:+25885089 | None:intergenic |
| CTTCCACTGGAAATGCAGTG+AGG | 0.694294 | 3.4:+25885719 | None:intergenic |
| TATGTGATTGTCCTGAACTG+AGG | 0.702469 | 3.4:-25886026 | MS.gene77842:CDS |
| TTGACATACCTGTTATACGT+AGG | 0.715052 | 3.4:+25886223 | None:intergenic |
| TGTGATTGTCCTGAACTGAG+GGG | 0.810172 | 3.4:-25886024 | MS.gene77842:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATAAAAGAAATAGATATTT+CGG | - | chr3.4:25885167-25885186 | MS.gene77842:CDS | 10.0% |
| !! | AATAGAAATTGTTTGTAATT+TGG | + | chr3.4:25885760-25885779 | None:intergenic | 15.0% |
| !! | ATAAAAGAAATAGATATTTC+GGG | - | chr3.4:25885168-25885187 | MS.gene77842:CDS | 15.0% |
| !! | ATAGAAATTGTTTGTAATTT+GGG | + | chr3.4:25885759-25885778 | None:intergenic | 15.0% |
| !!! | AATATCTATTTCTTTTATTG+AGG | + | chr3.4:25885166-25885185 | None:intergenic | 15.0% |
| !!! | AATTTTTTAATATGCCAAAT+TGG | - | chr3.4:25884962-25884981 | MS.gene77842:CDS | 15.0% |
| !!! | TTTATTTACAAATGTTTCTA+TGG | + | chr3.4:25885097-25885116 | None:intergenic | 15.0% |
| !! | ACTTATTGACAAAAACATTA+AGG | + | chr3.4:25885919-25885938 | None:intergenic | 20.0% |
| !!! | AGAACTTTCTGAAATAAAAA+TGG | + | chr3.4:25885577-25885596 | None:intergenic | 20.0% |
| !!! | TTATATTTTTCAATTGTCAG+CGG | - | chr3.4:25886003-25886022 | MS.gene77842:CDS | 20.0% |
| ! | AAAAGGTTGAAATGAAGAAT+TGG | + | chr3.4:25884923-25884942 | None:intergenic | 25.0% |
| ! | AAAGTGGTAGATTGAAAAAT+TGG | - | chr3.4:25886180-25886199 | MS.gene77842:CDS | 25.0% |
| ! | GACAAAAACATTAAGGAAAT+GGG | + | chr3.4:25885912-25885931 | None:intergenic | 25.0% |
| ! | TGACAAAAACATTAAGGAAA+TGG | + | chr3.4:25885913-25885932 | None:intergenic | 25.0% |
| ! | TTAGAAAAAATGCATGAAAG+TGG | - | chr3.4:25886164-25886183 | MS.gene77842:CDS | 25.0% |
| !! | AAAATACACAAAGTATTTGG+AGG | + | chr3.4:25885617-25885636 | None:intergenic | 25.0% |
| !! | AAATACACAAAGTATTTGGA+GGG | + | chr3.4:25885616-25885635 | None:intergenic | 25.0% |
| !! | AATCGTAGAAAGAAAGTTTT+CGG | + | chr3.4:25886067-25886086 | None:intergenic | 25.0% |
| !! | AGGAAAATACACAAAGTATT+TGG | + | chr3.4:25885620-25885639 | None:intergenic | 25.0% |
| !! | ATGTCAATATTTGAGACAAT+TGG | - | chr3.4:25884865-25884884 | MS.gene77842:CDS | 25.0% |
| !!! | CATGCATTTTTTCTAAAACA+GGG | + | chr3.4:25886160-25886179 | None:intergenic | 25.0% |
| !!! | TCATGCATTTTTTCTAAAAC+AGG | + | chr3.4:25886161-25886180 | None:intergenic | 25.0% |
| AAACCCCATTCAATTAATAG+CGG | + | chr3.4:25885807-25885826 | None:intergenic | 30.0% | |
| AGGAAATATGTCATCTTGAA+TGG | + | chr3.4:25885001-25885020 | None:intergenic | 30.0% | |
| ATAATAATACCTGCAGCAAA+GGG | + | chr3.4:25886218-25886237 | None:intergenic | 30.0% | |
| ATATGCCAAATTGGAAGAAA+TGG | - | chr3.4:25884971-25884990 | MS.gene77842:CDS | 30.0% | |
| GAAATTGTTTGTAATTTGGG+AGG | + | chr3.4:25885756-25885775 | None:intergenic | 30.0% | |
| GGAAATATGTCATCTTGAAT+GGG | + | chr3.4:25885000-25885019 | None:intergenic | 30.0% | |
| TACATTCTACAAAGACTCAA+TGG | - | chr3.4:25885196-25885215 | MS.gene77842:CDS | 30.0% | |
| TATTGTTAACACCTTGTTGA+AGG | - | chr3.4:25885875-25885894 | MS.gene77842:CDS | 30.0% | |
| ! | ACAATTCTGAAAGAGAAGTA+AGG | + | chr3.4:25885836-25885855 | None:intergenic | 30.0% |
| ! | ATGTTTCTATGGAAGAAAGA+TGG | + | chr3.4:25885086-25885105 | None:intergenic | 30.0% |
| !!! | AACATCAGAGTTTTAAGACA+AGG | + | chr3.4:25885027-25885046 | None:intergenic | 30.0% |
| !!! | AGAGTTTTAAGACAAGGAAA+AGG | + | chr3.4:25885021-25885040 | None:intergenic | 30.0% |
| AAAAAATTTCAGCCTCTCGA+GGG | + | chr3.4:25884950-25884969 | None:intergenic | 35.0% | |
| ACTTCTCGCAATCATGAATA+TGG | + | chr3.4:25885404-25885423 | None:intergenic | 35.0% | |
| AGATGCCGCTATTAATTGAA+TGG | - | chr3.4:25885799-25885818 | MS.gene77842:CDS | 35.0% | |
| ATGAAACGCTTAGATGGAAA+TGG | - | chr3.4:25885951-25885970 | MS.gene77842:CDS | 35.0% | |
| ATGCCGCTATTAATTGAATG+GGG | - | chr3.4:25885801-25885820 | MS.gene77842:CDS | 35.0% | |
| CAGATACAAACTTTCAAGAG+TGG | + | chr3.4:25885685-25885704 | None:intergenic | 35.0% | |
| GATAATAATACCTGCAGCAA+AGG | + | chr3.4:25886219-25886238 | None:intergenic | 35.0% | |
| GATGCCGCTATTAATTGAAT+GGG | - | chr3.4:25885800-25885819 | MS.gene77842:CDS | 35.0% | |
| TAAAAAATTTCAGCCTCTCG+AGG | + | chr3.4:25884951-25884970 | None:intergenic | 35.0% | |
| TAAACGTTGTCCTCATTTGT+TGG | - | chr3.4:25885113-25885132 | MS.gene77842:CDS | 35.0% | |
| TAAGTGTTTCAAGAGATGAG+AGG | + | chr3.4:25885986-25886005 | None:intergenic | 35.0% | |
| TAGTGATATAAGGGCTTTAC+AGG | + | chr3.4:25885640-25885659 | None:intergenic | 35.0% | |
| TCTATGGAAGAAAGATGGTT+AGG | + | chr3.4:25885081-25885100 | None:intergenic | 35.0% | |
| TGAAACGCTTAGATGGAAAT+GGG | - | chr3.4:25885952-25885971 | MS.gene77842:CDS | 35.0% | |
| TTGACATACCTGTTATACGT+AGG | + | chr3.4:25884852-25884871 | None:intergenic | 35.0% | |
| ! | ACTGCAGCTCAAAATCATTT+TGG | + | chr3.4:25885298-25885317 | None:intergenic | 35.0% |
| ! | CTGCAGCTCAAAATCATTTT+GGG | + | chr3.4:25885297-25885316 | None:intergenic | 35.0% |
| ! | TCTGAAATGAAACGCTTAGA+TGG | - | chr3.4:25885945-25885964 | MS.gene77842:CDS | 35.0% |
| !! | CATAGTGACAACTCTAGTTT+TGG | + | chr3.4:25885717-25885736 | None:intergenic | 35.0% |
| !!! | ACAACTCTAGTTTTGGAAGA+TGG | + | chr3.4:25885710-25885729 | None:intergenic | 35.0% |
| AACCATCAATCCAAAGCTCT+TGG | + | chr3.4:25885539-25885558 | None:intergenic | 40.0% | |
| AATCACCACCTACTCTTGAA+TGG | - | chr3.4:25885136-25885155 | MS.gene77842:CDS | 40.0% | |
| ACAAACTTTCAAGAGTGGTG+AGG | + | chr3.4:25885680-25885699 | None:intergenic | 40.0% | |
| ACAATTGGTCCAGAGTTCTA+TGG | - | chr3.4:25884880-25884899 | MS.gene77842:CDS | 40.0% | |
| ATGTGATTGTCCTGAACTGA+GGG | - | chr3.4:25885047-25885066 | MS.gene77842:CDS | 40.0% | |
| ATTCGCCATTTCTACTGCAA+CGG | - | chr3.4:25885235-25885254 | MS.gene77842:CDS | 40.0% | |
| CAAACTTTCAAGAGTGGTGA+GGG | + | chr3.4:25885679-25885698 | None:intergenic | 40.0% | |
| CCCTTATATCACTACCTCAA+CGG | - | chr3.4:25885646-25885665 | MS.gene77842:CDS | 40.0% | |
| CCGTTGAGGTAGTGATATAA+GGG | + | chr3.4:25885649-25885668 | None:intergenic | 40.0% | |
| CTAGAGTTGTCACTATGTGA+AGG | - | chr3.4:25885720-25885739 | MS.gene77842:CDS | 40.0% | |
| CTGAAAGAGAAGTAAGGCTT+TGG | + | chr3.4:25885830-25885849 | None:intergenic | 40.0% | |
| GAAGTTATCATTCATGCCTC+AGG | - | chr3.4:25885419-25885438 | MS.gene77842:CDS | 40.0% | |
| GGAAGCCATTTCTTCCAATT+TGG | + | chr3.4:25884979-25884998 | None:intergenic | 40.0% | |
| GTTAACCGTTGCAGTAGAAA+TGG | + | chr3.4:25885243-25885262 | None:intergenic | 40.0% | |
| TATATCACTACCTCAACGGA+TGG | - | chr3.4:25885650-25885669 | MS.gene77842:CDS | 40.0% | |
| TATGTGATTGTCCTGAACTG+AGG | - | chr3.4:25885046-25885065 | MS.gene77842:CDS | 40.0% | |
| TCCGTTGAGGTAGTGATATA+AGG | + | chr3.4:25885650-25885669 | None:intergenic | 40.0% | |
| TTGACTTTACACAGTAGCTG+TGG | - | chr3.4:25885474-25885493 | MS.gene77842:CDS | 40.0% | |
| TTTGGCAATGACTCAAGTCT+TGG | + | chr3.4:25886092-25886111 | None:intergenic | 40.0% | |
| ! | AAAGTATTTGGAGGGTTGAG+GGG | + | chr3.4:25885608-25885627 | None:intergenic | 40.0% |
| ! | ACAAAGTATTTGGAGGGTTG+AGG | + | chr3.4:25885610-25885629 | None:intergenic | 40.0% |
| ! | CAAAGTATTTGGAGGGTTGA+GGG | + | chr3.4:25885609-25885628 | None:intergenic | 40.0% |
| ! | CTTTGGATTGATGGTTGTAG+CGG | - | chr3.4:25885543-25885562 | MS.gene77842:CDS | 40.0% |
| ! | GAAAGAAAGTTTTCGGAGAG+AGG | + | chr3.4:25886060-25886079 | None:intergenic | 40.0% |
| ! | GAGCAATTACACATCGCTTT+TGG | - | chr3.4:25885449-25885468 | MS.gene77842:CDS | 40.0% |
| !! | AGGTAATTTGTTCTCTGCCA+AGG | + | chr3.4:25886036-25886055 | None:intergenic | 40.0% |
| AAAACCATCCAGTGGAAAGG+AGG | + | chr3.4:25885508-25885527 | None:intergenic | 45.0% | |
| AAAGCTCAGCATCTTGAGAG+AGG | + | chr3.4:25886129-25886148 | None:intergenic | 45.0% | |
| AAGCAACTGCTCCTTCAACA+AGG | + | chr3.4:25885889-25885908 | None:intergenic | 45.0% | |
| AGCTTAGGAAAACCATCCAG+TGG | + | chr3.4:25885516-25885535 | None:intergenic | 45.0% | |
| AGGAAAACCATCCAGTGGAA+AGG | + | chr3.4:25885511-25885530 | None:intergenic | 45.0% | |
| AGGACAACTACCTTCTGTCA+AGG | - | chr3.4:25884825-25884844 | MS.gene77842:CDS | 45.0% | |
| AGGTCTACCAACTTCTTTGC+AGG | - | chr3.4:25885374-25885393 | MS.gene77842:CDS | 45.0% | |
| ATACGTAGGTCCTTGACAGA+AGG | + | chr3.4:25884838-25884857 | None:intergenic | 45.0% | |
| ATCCAAAGCTCTTGGAGCTT+AGG | + | chr3.4:25885531-25885550 | None:intergenic | 45.0% | |
| CTCCAACTCTTGAGACTTCA+TGG | - | chr3.4:25885321-25885340 | MS.gene77842:CDS | 45.0% | |
| GAAGGTAGTTGTCCTAGTGA+TGG | + | chr3.4:25884820-25884839 | None:intergenic | 45.0% | |
| GACCATGAAGTCTCAAGAGT+TGG | + | chr3.4:25885326-25885345 | None:intergenic | 45.0% | |
| GGCGAATCGCTTTCAACAAA+CGG | + | chr3.4:25885222-25885241 | None:intergenic | 45.0% | |
| GGTGGTGATTCCAACAAATG+AGG | + | chr3.4:25885126-25885145 | None:intergenic | 45.0% | |
| GTCAAGGACCTACGTATAAC+AGG | - | chr3.4:25884841-25884860 | MS.gene77842:CDS | 45.0% | |
| TAATTGCTCCACGTTTCCTG+AGG | + | chr3.4:25885438-25885457 | None:intergenic | 45.0% | |
| TCAGCATCTTGAGAGAGGAA+GGG | + | chr3.4:25886124-25886143 | None:intergenic | 45.0% | |
| TGTGATTGTCCTGAACTGAG+GGG | - | chr3.4:25885048-25885067 | MS.gene77842:CDS | 45.0% | |
| TGTGTGAGACTTCCATCACT+AGG | - | chr3.4:25884805-25884824 | MS.gene77842:CDS | 45.0% | |
| TTCCACTGGAAATGCAGTGA+GGG | + | chr3.4:25885355-25885374 | None:intergenic | 45.0% | |
| TTCCTAAGCTCCAAGAGCTT+TGG | - | chr3.4:25885526-25885545 | MS.gene77842:CDS | 45.0% | |
| ! | GAAAGTTTTCGGAGAGAGGA+AGG | + | chr3.4:25886056-25886075 | None:intergenic | 45.0% |
| ! | GAGGAAGGGAGATTGTCTTT+TGG | + | chr3.4:25886110-25886129 | None:intergenic | 45.0% |
| !! | CTCCAAGAGCTTTGGATTGA+TGG | - | chr3.4:25885534-25885553 | MS.gene77842:CDS | 45.0% |
| AATTTCAGCCTCTCGAGGGA+TGG | + | chr3.4:25884946-25884965 | None:intergenic | 50.0% | |
| ACTGGAAATGCAGTGAGGGA+CGG | + | chr3.4:25885351-25885370 | None:intergenic | 50.0% | |
| AGAATTACGCCCTTTGCTGC+AGG | - | chr3.4:25886206-25886225 | MS.gene77842:CDS | 50.0% | |
| CATTCATGCCTCAGGAAACG+TGG | - | chr3.4:25885427-25885446 | MS.gene77842:CDS | 50.0% | |
| CCAACCATGCCATAGAACTC+TGG | + | chr3.4:25884892-25884911 | None:intergenic | 50.0% | |
| CCAGAGTTCTATGGCATGGT+TGG | - | chr3.4:25884889-25884908 | MS.gene77842:CDS | 50.0% | |
| CTCACTGCATTTCCAGTGGA+AGG | - | chr3.4:25885354-25885373 | MS.gene77842:CDS | 50.0% | |
| CTCACTTTCCTCCTTTCCAC+TGG | - | chr3.4:25885497-25885516 | MS.gene77842:CDS | 50.0% | |
| CTCAGCATCTTGAGAGAGGA+AGG | + | chr3.4:25886125-25886144 | None:intergenic | 50.0% | |
| CTTCCACTGGAAATGCAGTG+AGG | + | chr3.4:25885356-25885375 | None:intergenic | 50.0% | |
| CTTTCCTCCTTTCCACTGGA+TGG | - | chr3.4:25885501-25885520 | MS.gene77842:CDS | 50.0% | |
| GAGAGCCATTCAAGAGTAGG+TGG | + | chr3.4:25885144-25885163 | None:intergenic | 50.0% | |
| GAGGAGAGCCATTCAAGAGT+AGG | + | chr3.4:25885147-25885166 | None:intergenic | 50.0% | |
| GAGTTCTATGGCATGGTTGG+AGG | - | chr3.4:25884892-25884911 | MS.gene77842:CDS | 50.0% | |
| GGCAAATTTCCCCTCAGTTC+AGG | + | chr3.4:25885060-25885079 | None:intergenic | 50.0% | |
| TGGTCCAGAGTTCTATGGCA+TGG | - | chr3.4:25884885-25884904 | MS.gene77842:CDS | 50.0% | |
| TTCTATGGCATGGTTGGAGG+AGG | - | chr3.4:25884895-25884914 | MS.gene77842:CDS | 50.0% | |
| ! | AACCTTTTCCATCCCTCGAG+AGG | - | chr3.4:25884935-25884954 | MS.gene77842:CDS | 50.0% |
| ! | GATTGATGGTTGTAGCGGTC+TGG | - | chr3.4:25885548-25885567 | MS.gene77842:CDS | 50.0% |
| ! | TGCAGCAAAGGGCGTAATTC+TGG | + | chr3.4:25886207-25886226 | None:intergenic | 50.0% |
| ! | TGGAGTGCCTGCAAAGAAGT+TGG | + | chr3.4:25885384-25885403 | None:intergenic | 50.0% |
| !! | GAAGTTGGTAGACCTTCCAC+TGG | + | chr3.4:25885369-25885388 | None:intergenic | 50.0% |
| AGCCTCTCGAGGGATGGAAA+AGG | + | chr3.4:25884940-25884959 | None:intergenic | 55.0% | |
| GTCCCTCACTGCATTTCCAG+TGG | - | chr3.4:25885350-25885369 | MS.gene77842:CDS | 55.0% | |
| TTGGAGGGTTGAGGGGTGAT+AGG | + | chr3.4:25885601-25885620 | None:intergenic | 55.0% | |
| TTGTCAGCGGCTTGAGTCCT+TGG | - | chr3.4:25886016-25886035 | MS.gene77842:CDS | 55.0% | |
| !! | GTGAGGGTGTCCATCCGTTG+AGG | + | chr3.4:25885663-25885682 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.4 | gene | 25884772 | 25886322 | 25884772 | ID=MS.gene77842 |
| chr3.4 | mRNA | 25884772 | 25886322 | 25884772 | ID=MS.gene77842.t1;Parent=MS.gene77842 |
| chr3.4 | exon | 25884772 | 25886322 | 25884772 | ID=MS.gene77842.t1.exon1;Parent=MS.gene77842.t1 |
| chr3.4 | CDS | 25884772 | 25886322 | 25884772 | ID=cds.MS.gene77842.t1;Parent=MS.gene77842.t1 |
| Gene Sequence |
| Protein sequence |
