AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0480022752.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480022752.01.T01 MTR_4g094550 89.241 316 34 0 1 316 115 430 0.0 595
MsG0480022752.01.T01 MTR_4g094560 87.540 313 39 0 3 315 106 418 0.0 580
MsG0480022752.01.T01 MTR_4g094555 86.349 315 43 0 1 315 114 428 0.0 573
MsG0480022752.01.T01 MTR_4g094548 84.762 315 48 0 1 315 116 430 0.0 566
MsG0480022752.01.T01 MTR_4g094570 82.540 315 55 0 1 315 114 428 0.0 555
MsG0480022752.01.T01 MTR_6g048350 83.713 307 50 0 9 315 122 428 0.0 553
MsG0480022752.01.T01 MTR_6g048310 81.210 314 55 1 1 314 112 421 0.0 539
MsG0480022752.01.T01 MTR_4g094562 82.484 314 47 1 1 314 114 419 0.0 539
MsG0480022752.01.T01 MTR_4g094565 67.619 315 49 1 1 315 86 347 9.14e-151 427
MsG0480022752.01.T01 MTR_1g052640 65.878 296 100 1 8 302 116 411 3.77e-149 425
MsG0480022752.01.T01 MTR_0083s0100 65.541 296 101 1 8 302 116 411 4.35e-149 425
MsG0480022752.01.T01 MTR_2g030460 63.333 300 109 1 5 303 113 412 1.31e-144 414
MsG0480022752.01.T01 MTR_2g030470 63.107 309 108 1 2 304 107 415 9.85e-142 420
MsG0480022752.01.T01 MTR_2g030470 63.487 304 105 1 2 299 519 822 1.37e-138 412
MsG0480022752.01.T01 MTR_2g030480 61.238 307 93 2 2 302 104 390 4.68e-134 386
MsG0480022752.01.T01 MTR_4g094565 83.237 173 29 0 1 173 86 258 6.65e-104 306
MsG0480022752.01.T01 MTR_1g052640 63.470 219 79 1 8 225 116 334 2.46e-103 306
MsG0480022752.01.T01 MTR_4g094562 77.596 183 41 0 1 183 114 296 2.00e-102 303
MsG0480022752.01.T01 MTR_2g030460 61.261 222 85 1 5 225 113 334 4.57e-102 303
MsG0480022752.01.T01 MTR_8g039300 48.026 304 136 7 6 300 117 407 2.04e-96 291
MsG0480022752.01.T01 MTR_6g089930 44.737 304 148 6 6 301 117 408 2.48e-92 280
MsG0480022752.01.T01 MTR_3g035040 46.230 305 142 7 6 301 117 408 3.27e-91 278
MsG0480022752.01.T01 MTR_6g090090 45.215 303 136 7 6 300 143 423 5.10e-88 270
MsG0480022752.01.T01 MTR_1g052640 63.095 168 61 1 8 174 116 283 2.52e-77 238
MsG0480022752.01.T01 MTR_1g035220 41.199 267 131 5 6 271 117 358 3.77e-70 222
MsG0480022752.01.T01 MTR_1g062750 40.805 174 92 2 8 174 65 234 1.25e-47 160
MsG0480022752.01.T02 MTR_4g094550 89.241 316 34 0 1 316 115 430 0.0 595
MsG0480022752.01.T02 MTR_4g094560 87.540 313 39 0 3 315 106 418 0.0 580
MsG0480022752.01.T02 MTR_4g094555 86.349 315 43 0 1 315 114 428 0.0 573
MsG0480022752.01.T02 MTR_4g094548 84.762 315 48 0 1 315 116 430 0.0 566
MsG0480022752.01.T02 MTR_4g094570 82.540 315 55 0 1 315 114 428 0.0 555
MsG0480022752.01.T02 MTR_6g048350 83.713 307 50 0 9 315 122 428 0.0 553
MsG0480022752.01.T02 MTR_6g048310 81.210 314 55 1 1 314 112 421 0.0 539
MsG0480022752.01.T02 MTR_4g094562 82.484 314 47 1 1 314 114 419 0.0 539
MsG0480022752.01.T02 MTR_4g094565 67.619 315 49 1 1 315 86 347 9.14e-151 427
MsG0480022752.01.T02 MTR_1g052640 65.878 296 100 1 8 302 116 411 3.77e-149 425
MsG0480022752.01.T02 MTR_0083s0100 65.541 296 101 1 8 302 116 411 4.35e-149 425
MsG0480022752.01.T02 MTR_2g030460 63.333 300 109 1 5 303 113 412 1.31e-144 414
MsG0480022752.01.T02 MTR_2g030470 63.107 309 108 1 2 304 107 415 9.85e-142 420
MsG0480022752.01.T02 MTR_2g030470 63.487 304 105 1 2 299 519 822 1.37e-138 412
MsG0480022752.01.T02 MTR_2g030480 61.238 307 93 2 2 302 104 390 4.68e-134 386
MsG0480022752.01.T02 MTR_4g094565 83.237 173 29 0 1 173 86 258 6.65e-104 306
MsG0480022752.01.T02 MTR_1g052640 63.470 219 79 1 8 225 116 334 2.46e-103 306
MsG0480022752.01.T02 MTR_4g094562 77.596 183 41 0 1 183 114 296 2.00e-102 303
MsG0480022752.01.T02 MTR_2g030460 61.261 222 85 1 5 225 113 334 4.57e-102 303
MsG0480022752.01.T02 MTR_8g039300 48.026 304 136 7 6 300 117 407 2.04e-96 291
MsG0480022752.01.T02 MTR_6g089930 44.737 304 148 6 6 301 117 408 2.48e-92 280
MsG0480022752.01.T02 MTR_3g035040 46.230 305 142 7 6 301 117 408 3.27e-91 278
MsG0480022752.01.T02 MTR_6g090090 45.215 303 136 7 6 300 143 423 5.10e-88 270
MsG0480022752.01.T02 MTR_1g052640 63.095 168 61 1 8 174 116 283 2.52e-77 238
MsG0480022752.01.T02 MTR_1g035220 41.199 267 131 5 6 271 117 358 3.77e-70 222
MsG0480022752.01.T02 MTR_1g062750 40.805 174 92 2 8 174 65 234 1.25e-47 160
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480022752.01.T01 AT5G61820 56.250 320 123 6 4 313 129 441 5.37e-125 366
MsG0480022752.01.T01 AT5G61820 56.250 320 123 6 4 313 129 441 5.37e-125 366
MsG0480022752.01.T02 AT5G61820 56.250 320 123 6 4 313 129 441 5.37e-125 366
MsG0480022752.01.T02 AT5G61820 56.250 320 123 6 4 313 129 441 5.37e-125 366

Find 62 sgRNAs with CRISPR-Local

Find 279 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACTTAAGATACACAGTTAAA+TGG 0.182693 4:-76302874 MsG0480022752.01.T01:CDS
TCCAGGTCCTAGCTCAAATT+TGG 0.222916 4:+76303471 None:intergenic
ACACCATGCTCAGGTTCTTT+TGG 0.238296 4:-76303534 MsG0480022752.01.T01:five_prime_UTR
AATGTTACAGTTGATGAATA+TGG 0.303360 4:-76302998 MsG0480022752.01.T01:CDS
CATATCTCCTCATATCCTTC+TGG 0.316534 4:+76303100 None:intergenic
CCAGGTCCTAGCTCAAATTT+GGG 0.347633 4:+76303472 None:intergenic
GCAATACTCTTGCTGTTGTT+TGG 0.348458 4:-76303558 MsG0480022752.01.T01:five_prime_UTR
TAAGTTTCATGGAGAGGTAT+AGG 0.349623 4:+76303352 None:intergenic
ACACAGTTAAATGGGTTGAT+TGG 0.350890 4:-76302865 MsG0480022752.01.T01:CDS
CAGAAGGATATGAGGAGATA+TGG 0.353403 4:-76303099 MsG0480022752.01.T01:CDS
CTTAAGTAAAGGCTTCTCTT+TGG 0.353568 4:+76302890 None:intergenic
ATGAAACTTATCTCCATCAT+TGG 0.356421 4:-76303339 MsG0480022752.01.T01:five_prime_UTR
AGGAACGGTGACCGATATTC+CGG 0.357488 4:-76303161 MsG0480022752.01.T01:CDS
CACAGTTAAATGGGTTGATT+GGG 0.382104 4:-76302864 MsG0480022752.01.T01:CDS
AATGATGGAGATAAGTTTCA+TGG 0.396431 4:+76303341 None:intergenic
TCCGAATGGATCCGGAATAT+CGG 0.398280 4:+76303150 None:intergenic
CTTAAGATACACAGTTAAAT+GGG 0.410788 4:-76302873 MsG0480022752.01.T01:CDS
CGCGGTGTGGAGGATAAGTT+AGG 0.426766 4:-76303049 MsG0480022752.01.T01:CDS
ATCTCTATTCCGAATGGATC+CGG 0.432103 4:+76303142 None:intergenic
CATCAACTGTAACATTATAA+AGG 0.435686 4:+76303005 None:intergenic
TCAATAAGGTCAGATTATAA+AGG 0.436435 4:-76302971 MsG0480022752.01.T01:CDS
TTGTTTGGCACACCATGCTC+AGG 0.437320 4:-76303543 MsG0480022752.01.T01:five_prime_UTR
CCCAAATTTGAGCTAGGACC+TGG 0.447991 4:-76303472 MsG0480022752.01.T01:five_prime_UTR
TTGATTGCTATATGACCTCT+TGG 0.453879 4:+76303412 None:intergenic
AACGGACAGTACTTTGGGCT+TGG 0.458369 4:-76303196 MsG0480022752.01.T01:CDS
CTCCACACCGCGCGTATCAA+TGG 0.458833 4:+76303060 None:intergenic
TAACTGTGTATCTTAAGTAA+AGG 0.460336 4:+76302879 None:intergenic
AAACTATCAGATGATTCAAA+AGG 0.461623 4:-76302788 MsG0480022752.01.T01:CDS
TCACACACACTCTAAATTTG+AGG 0.464704 4:-76304517 MsG0480022752.01.T01:intron
ATGAATATGGAAGGTCAATA+AGG 0.466178 4:-76302985 MsG0480022752.01.T01:CDS
ACCGATATTCCGGATCCATT+CGG 0.467121 4:-76303151 MsG0480022752.01.T01:CDS
TGAAACTTATCTCCATCATT+GGG 0.469217 4:-76303338 MsG0480022752.01.T01:five_prime_UTR
GATCCATTCGGAATAGAGAT+AGG 0.487132 4:-76303139 MsG0480022752.01.T01:CDS
ATCTTTCAACAACCCAATGA+TGG 0.507144 4:+76303326 None:intergenic
TATCCTTCTGGAATATCTGC+AGG 0.507928 4:+76303112 None:intergenic
TTATACACAGTGCAAGTTGA+AGG 0.508751 4:-76302927 MsG0480022752.01.T01:CDS
AGATATTCCAGAAGGATATG+AGG 0.514011 4:-76303107 MsG0480022752.01.T01:CDS
TATCTATTGATAACTGATCC+AGG 0.514983 4:+76303454 None:intergenic
GTCACACACATAAGAAATGA+TGG 0.520359 4:-76303286 MsG0480022752.01.T01:five_prime_UTR
ACACAGTGCAAGTTGAAGGA+AGG 0.578271 4:-76302923 MsG0480022752.01.T01:CDS
TTACCTATCTCTATTCCGAA+TGG 0.583103 4:+76303136 None:intergenic
GAACTCAGATCATGATTGCA+AGG 0.588027 4:-76302762 MsG0480022752.01.T01:intron
TGGATCTGAAACACGAGGAA+CGG 0.597554 4:-76303176 MsG0480022752.01.T01:CDS
TGCCATTGATACGCGCGGTG+TGG 0.598065 4:-76303062 MsG0480022752.01.T01:CDS
CATTGATACGCGCGGTGTGG+AGG 0.606928 4:-76303059 MsG0480022752.01.T01:CDS
TTCCCAAAAGAACCTGAGCA+TGG 0.611307 4:+76303531 None:intergenic
GCTGAAGTAGTTGATGAAGC+TGG 0.614547 4:-76303379 MsG0480022752.01.T01:five_prime_UTR
ATAAGGTCAGATTATAAAGG+AGG 0.616158 4:-76302968 MsG0480022752.01.T01:CDS
AGGATATGAGGAGATATGGA+TGG 0.620598 4:-76303095 MsG0480022752.01.T01:CDS
AACAGCAAGAGTATTGCCAA+TGG 0.620972 4:+76303564 None:intergenic
AGGAACAGTGGTATATGCCA+AGG 0.623948 4:-76303226 MsG0480022752.01.T01:CDS
GCGGTGTGGAGGATAAGTTA+GGG 0.627173 4:-76303048 MsG0480022752.01.T01:CDS
TGGAGATAAGTTTCATGGAG+AGG 0.630553 4:+76303346 None:intergenic
TTACAGTTGATGAATATGGA+AGG 0.632054 4:-76302994 MsG0480022752.01.T01:CDS
ACATAAGAAATGATGGCCAA+AGG 0.633089 4:-76303279 MsG0480022752.01.T01:five_prime_UTR
GGGCTTGGATCTGAAACACG+AGG 0.638622 4:-76303181 MsG0480022752.01.T01:CDS
AATCCTGCAGATATTCCAGA+AGG 0.641795 4:-76303115 MsG0480022752.01.T01:CDS
ATTCTGATAATGTTATGCTG+AGG 0.659236 4:-76303246 MsG0480022752.01.T01:CDS
CAGGTCCTAGCTCAAATTTG+GGG 0.677421 4:+76303473 None:intergenic
AGGTCCTAGCTCAAATTTGG+GGG 0.688231 4:+76303474 None:intergenic
AATGTTATGCTGAGGAACAG+TGG 0.703854 4:-76303238 MsG0480022752.01.T01:CDS
GTTCATGCCATTGATACGCG+CGG 0.723014 4:-76303067 MsG0480022752.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTAAAATAAATAAAATAATA+AGG - Chr4:76303166-76303185 MsG0480022752.01.T01:CDS 0.0%
!! TAAAAAAAAAAAAAAACTTG+AGG + Chr4:76299961-76299980 None:intergenic 10.0%
!! TTATATTAAAATCCAAAATA+CGG - Chr4:76301700-76301719 MsG0480022752.01.T01:three_prime_UTR 10.0%
!!! AAATACATAATTTCTATTTT+TGG + Chr4:76303320-76303339 None:intergenic 10.0%
!!! TCAAGTTTTTTTTTTTTTTT+AGG - Chr4:76299960-76299979 MsG0480022752.01.T01:intron 10.0%
!!! TTTTTAATGATAAATTGAAA+AGG - Chr4:76304199-76304218 MsG0480022752.01.T01:intron 10.0%
!! AAAAGAATAATTGCTAAATT+TGG + Chr4:76303082-76303101 None:intergenic 15.0%
!! AAAGAATAATTGCTAAATTT+GGG + Chr4:76303081-76303100 None:intergenic 15.0%
!! AAGAAAAAAATTGTATTTGT+TGG - Chr4:76304329-76304348 MsG0480022752.01.T01:intron 15.0%
!! AGAAATGTAAAATTTAAACA+AGG + Chr4:76304097-76304116 None:intergenic 15.0%
!! ATAGTAGAGTAAATATTAAA+AGG - Chr4:76300127-76300146 MsG0480022752.01.T01:intron 15.0%
!! ATTAATTAAGCAGATATATT+TGG + Chr4:76302901-76302920 None:intergenic 15.0%
!! CGAAACTTAAAAAATTTATA+GGG - Chr4:76304026-76304045 MsG0480022752.01.T01:intron 15.0%
!! GAAATGTAAAATTTAAACAA+GGG + Chr4:76304096-76304115 None:intergenic 15.0%
!! TAGTAGAGTAAATATTAAAA+GGG - Chr4:76300128-76300147 MsG0480022752.01.T01:intron 15.0%
!! TCAAAAAATTTGCAAAAAAA+AGG + Chr4:76303768-76303787 None:intergenic 15.0%
!! TTAATTATAATTAAGGTAAG+AGG + Chr4:76304311-76304330 None:intergenic 15.0%
!!! ATTTATTTATTTTTTGCAGT+CGG - Chr4:76303722-76303741 MsG0480022752.01.T01:intron 15.0%
!!! TCATGTTTTGTTAAAAAAAA+TGG - Chr4:76303860-76303879 MsG0480022752.01.T01:intron 15.0%
!!! TTAACCCTTATATTTTTTTA+GGG - Chr4:76304061-76304080 MsG0480022752.01.T01:intron 15.0%
!!! TTATTATTTTTTGGTCAAAT+AGG - Chr4:76302771-76302790 MsG0480022752.01.T01:CDS 15.0%
!!! TTTAACCCTTATATTTTTTT+AGG - Chr4:76304060-76304079 MsG0480022752.01.T01:intron 15.0%
!! AAAAATACTGTTGAAATTTG+GGG + Chr4:76304441-76304460 None:intergenic 20.0%
!! AAGCTAAGTATTCTATTATT+TGG - Chr4:76300555-76300574 MsG0480022752.01.T01:intron 20.0%
!! AAGTCATTAAAAAATGTGAA+AGG - Chr4:76303917-76303936 MsG0480022752.01.T01:intron 20.0%
!! AATACAAAACTTTCTGTATT+TGG - Chr4:76302661-76302680 MsG0480022752.01.T01:intron 20.0%
!! ATTTCCCCTAAAAAAATATA+AGG + Chr4:76304069-76304088 None:intergenic 20.0%
!! CAAAAATACTGTTGAAATTT+GGG + Chr4:76304442-76304461 None:intergenic 20.0%
!! GCGAAACTTAAAAAATTTAT+AGG - Chr4:76304025-76304044 MsG0480022752.01.T01:intron 20.0%
!! TAGCAATAATTATTTAGCAA+AGG - Chr4:76303229-76303248 MsG0480022752.01.T01:CDS 20.0%
!! TCAAAAATACTGTTGAAATT+TGG + Chr4:76304443-76304462 None:intergenic 20.0%
!! TTTATGTCATAATTAAGGTT+TGG - Chr4:76300449-76300468 MsG0480022752.01.T01:intron 20.0%
!! TTTCCCCTAAAAAAATATAA+GGG + Chr4:76304068-76304087 None:intergenic 20.0%
!!! AGAAAATGCATATTTTAACA+TGG + Chr4:76300334-76300353 None:intergenic 20.0%
!!! ATAACATTATCAGAATTTTC+AGG + Chr4:76301096-76301115 None:intergenic 20.0%
!!! ATTATTGCTATTTTCAAAGT+TGG + Chr4:76303219-76303238 None:intergenic 20.0%
!!! GTTAAAATATGCATTTTCTA+AGG - Chr4:76300335-76300354 MsG0480022752.01.T01:intron 20.0%
!!! TAACCCTTATATTTTTTTAG+GGG - Chr4:76304062-76304081 MsG0480022752.01.T01:intron 20.0%
!!! TACGGTTATTTTTAAATACT+TGG - Chr4:76302095-76302114 MsG0480022752.01.T01:intron 20.0%
!!! TATCAGCAAAATAAAAGTTT+TGG - Chr4:76303620-76303639 MsG0480022752.01.T01:intron 20.0%
!!! TATGTAGTGTGTAATTATTT+TGG - Chr4:76302815-76302834 MsG0480022752.01.T01:CDS 20.0%
!!! TGATTTTGTAATAATGAGTT+AGG - Chr4:76304415-76304434 MsG0480022752.01.T01:intron 20.0%
!!! TTTATTTATTTTTTGCAGTC+GGG - Chr4:76303723-76303742 MsG0480022752.01.T01:intron 20.0%
! AAAAAAAAACTTGAGGCAAA+AGG + Chr4:76299954-76299973 None:intergenic 25.0%
! AAAAAAAACTTGAGGCAAAA+GGG + Chr4:76299953-76299972 None:intergenic 25.0%
! AAACTATCAGATGATTCAAA+AGG - Chr4:76301558-76301577 MsG0480022752.01.T01:three_prime_UTR 25.0%
! AATGAAATCAGAAAGTTGTT+TGG - Chr4:76300419-76300438 MsG0480022752.01.T01:intron 25.0%
! AATGGAAAAACAAAATGTCT+AGG + Chr4:76300767-76300786 None:intergenic 25.0%
! ACTAGTTAAACAGCTAAAAA+TGG + Chr4:76300285-76300304 None:intergenic 25.0%
! ACTATTATAAAACATCGAGT+TGG + Chr4:76300112-76300131 None:intergenic 25.0%
! ACTTAAGATACACAGTTAAA+TGG - Chr4:76301472-76301491 MsG0480022752.01.T01:intron 25.0%
! AGAATATGTTCGATCAAAAT+TGG - Chr4:76300074-76300093 MsG0480022752.01.T01:intron 25.0%
! AGACAAACAAACTACAAATT+TGG + Chr4:76301809-76301828 None:intergenic 25.0%
! ATATGCCAAGGAAATAAAAA+CGG - Chr4:76301132-76301151 MsG0480022752.01.T01:intron 25.0%
! ATGATGATTATAGAAACTTG+AGG + Chr4:76299993-76300012 None:intergenic 25.0%
! CAATAGTTACATACAACTTA+CGG - Chr4:76302077-76302096 MsG0480022752.01.T01:CDS 25.0%
! CATCAACTGTAACATTATAA+AGG + Chr4:76301344-76301363 None:intergenic 25.0%
! CATGAGTTAACACAAATTAA+AGG + Chr4:76303683-76303702 None:intergenic 25.0%
! CTAAGTATTCTATTATTTGG+AGG - Chr4:76300558-76300577 MsG0480022752.01.T01:intron 25.0%
! CTCAGTTTATGTCATAATTA+AGG - Chr4:76300444-76300463 MsG0480022752.01.T01:intron 25.0%
! CTTAAGATACACAGTTAAAT+GGG - Chr4:76301473-76301492 MsG0480022752.01.T01:intron 25.0%
! TAACTGTGTATCTTAAGTAA+AGG + Chr4:76301470-76301489 None:intergenic 25.0%
! TATTTGTAATATATGTGGAG+TGG - Chr4:76302561-76302580 MsG0480022752.01.T01:intron 25.0%
! TCAATAAGGTCAGATTATAA+AGG - Chr4:76301375-76301394 MsG0480022752.01.T01:intron 25.0%
! TCACGTATTTGTAATATATG+TGG - Chr4:76302556-76302575 MsG0480022752.01.T01:intron 25.0%
! TTATATGATACAAGAAAGAG+TGG + Chr4:76302847-76302866 None:intergenic 25.0%
! TTATTTAGCAAAGGTCAAAT+TGG - Chr4:76303238-76303257 MsG0480022752.01.T01:CDS 25.0%
! TTTACTATAATACCCAACAT+TGG + Chr4:76301866-76301885 None:intergenic 25.0%
!! AATATTTTCGTCAACACTTT+TGG + Chr4:76303965-76303984 None:intergenic 25.0%
!! AGTGTGTTTTATGACATTTA+TGG - Chr4:76302219-76302238 MsG0480022752.01.T01:intron 25.0%
!! TTAAAGGTATGAATCAAAAG+TGG + Chr4:76303667-76303686 None:intergenic 25.0%
!!! AATGTTACAGTTGATGAATA+TGG - Chr4:76301348-76301367 MsG0480022752.01.T01:intron 25.0%
!!! CATTTATGGATTATGTTTTC+AGG - Chr4:76302233-76302252 MsG0480022752.01.T01:intron 25.0%
!!! TACTCGTTCTTCATTTTTTA+TGG - Chr4:76302497-76302516 MsG0480022752.01.T01:intron 25.0%
!!! TAGACATTTTGTTTTTCCAT+TGG - Chr4:76300766-76300785 MsG0480022752.01.T01:intron 25.0%
!!! TAGGTATTTTTTGGTCAAAT+AGG - Chr4:76302790-76302809 MsG0480022752.01.T01:CDS 25.0%
!!! TATATGATTGGTCTAAAAAG+AGG - Chr4:76302609-76302628 MsG0480022752.01.T01:intron 25.0%
!!! TATGATATTGATTTTCCAAG+AGG - Chr4:76300919-76300938 MsG0480022752.01.T01:intron 25.0%
!!! TTGGTCAAATAGGTATTTTT+TGG - Chr4:76302781-76302800 MsG0480022752.01.T01:CDS 25.0%
AAAACTTTCTGTATTTGGCT+TGG - Chr4:76302666-76302685 MsG0480022752.01.T01:intron 30.0%
AAAATCAGCTTCTTATGTTG+TGG + Chr4:76304402-76304421 None:intergenic 30.0%
AAATCAGCTTCTTATGTTGT+GGG + Chr4:76304401-76304420 None:intergenic 30.0%
AATAAAAACGGACAGTACTT+TGG - Chr4:76301144-76301163 MsG0480022752.01.T01:intron 30.0%
ACAAAGTTGTCGATAGAAAT+AGG + Chr4:76303474-76303493 None:intergenic 30.0%
ACATTTCTTGCTTTATGATG+TGG - Chr4:76304109-76304128 MsG0480022752.01.T01:intron 30.0%
ATAAAAACGGACAGTACTTT+GGG - Chr4:76301145-76301164 MsG0480022752.01.T01:intron 30.0%
ATAAGGTCAGATTATAAAGG+AGG - Chr4:76301378-76301397 MsG0480022752.01.T01:intron 30.0%
ATCGAATGTTAGATCAAGAT+CGG - Chr4:76301641-76301660 MsG0480022752.01.T01:three_prime_UTR 30.0%
ATGAAACTTATCTCCATCAT+TGG - Chr4:76301007-76301026 MsG0480022752.01.T01:intron 30.0%
ATGAATATGGAAGGTCAATA+AGG - Chr4:76301361-76301380 MsG0480022752.01.T01:intron 30.0%
ATGTAACACTATTCCAATGT+TGG - Chr4:76301850-76301869 MsG0480022752.01.T01:CDS 30.0%
ATGTTCCTCAAATCTTACTT+TGG - Chr4:76299884-76299903 MsG0480022752.01.T01:three_prime_UTR 30.0%
CAAAGTTGTCGATAGAAATA+GGG + Chr4:76303473-76303492 None:intergenic 30.0%
CATTTCTTGCTTTATGATGT+GGG - Chr4:76304110-76304129 MsG0480022752.01.T01:intron 30.0%
CGTAAGTTGTATGTAACTAT+TGG + Chr4:76302079-76302098 None:intergenic 30.0%
CTTATGTGAGAGAAAACTAA+CGG - Chr4:76303544-76303563 MsG0480022752.01.T01:five_prime_UTR 30.0%
TCAATACCAAGTTATGGAAA+TGG - Chr4:76302276-76302295 MsG0480022752.01.T01:intron 30.0%
TGAAACTTATCTCCATCATT+GGG - Chr4:76301008-76301027 MsG0480022752.01.T01:intron 30.0%
TGCAATTTGAAAACTCTATC+TGG - Chr4:76300518-76300537 MsG0480022752.01.T01:intron 30.0%
TGTAACACTATTCCAATGTT+GGG - Chr4:76301851-76301870 MsG0480022752.01.T01:CDS 30.0%
TGTTCTTCAATACCAAGTTA+TGG - Chr4:76302270-76302289 MsG0480022752.01.T01:intron 30.0%
TTCGAAAAATTGAACAAACC+TGG + Chr4:76304145-76304164 None:intergenic 30.0%
! AAAATACCCTTTCTAGAAAG+AGG + Chr4:76303194-76303213 None:intergenic 30.0%
! AATGATGGAGATAAGTTTCA+TGG + Chr4:76301008-76301027 None:intergenic 30.0%
! ATATTCTTCGAATTTTCTCG+AGG - Chr4:76302155-76302174 MsG0480022752.01.T01:intron 30.0%
! ATTCTGATAATGTTATGCTG+AGG - Chr4:76301100-76301119 MsG0480022752.01.T01:intron 30.0%
! GTGTTGACGAAAATATTTAG+AGG - Chr4:76303968-76303987 MsG0480022752.01.T01:intron 30.0%
! TATCTATTGATAACTGATCC+AGG + Chr4:76300895-76300914 None:intergenic 30.0%
! TGATTGGGATGATTTTATAG+TGG - Chr4:76301497-76301516 MsG0480022752.01.T01:intron 30.0%
! TGCATTTTATATGGAAGAGT+CGG - Chr4:76304495-76304514 MsG0480022752.01.T01:intron 30.0%
!! AATGTCTAAAGTGTTGATGT+GGG + Chr4:76302476-76302495 None:intergenic 30.0%
!! ATTATGTTTTCAGGATGAGA+GGG - Chr4:76302242-76302261 MsG0480022752.01.T01:intron 30.0%
!! TTACAGTTGATGAATATGGA+AGG - Chr4:76301352-76301371 MsG0480022752.01.T01:intron 30.0%
!! TTGTTATTTAGACACAGAGA+TGG - Chr4:76303490-76303509 MsG0480022752.01.T01:five_prime_UTR 30.0%
!!! TAAAACATCGAGTTGGATTT+TGG + Chr4:76300105-76300124 None:intergenic 30.0%
!!! TAGGGGTATTGCATTTTATA+TGG - Chr4:76304486-76304505 MsG0480022752.01.T01:intron 30.0%
AAATACGGAGCTTGAAATCT+AGG - Chr4:76301715-76301734 MsG0480022752.01.T01:three_prime_UTR 35.0%
AACGAACTTCAATTCAGCAT+AGG - Chr4:76302925-76302944 MsG0480022752.01.T01:CDS 35.0%
AAGGAACACATTGGAGTAAT+GGG - Chr4:76302420-76302439 MsG0480022752.01.T01:CDS 35.0%
AATCAGCTTCTTATGTTGTG+GGG + Chr4:76304400-76304419 None:intergenic 35.0%
AATTACCTGTCCATATAAGG+TGG + Chr4:76302055-76302074 None:intergenic 35.0%
ACAAACCATAAGGAGGAAAA+TGG - Chr4:76301937-76301956 MsG0480022752.01.T01:CDS 35.0%
ACATAAGAAATGATGGCCAA+AGG - Chr4:76301067-76301086 MsG0480022752.01.T01:intron 35.0%
ACGAACTTCAATTCAGCATA+GGG - Chr4:76302926-76302945 MsG0480022752.01.T01:CDS 35.0%
AGATATTCCAGAAGGATATG+AGG - Chr4:76301239-76301258 MsG0480022752.01.T01:intron 35.0%
ATCAACATTCAGGTGGAATT+GGG - Chr4:76302028-76302047 MsG0480022752.01.T01:CDS 35.0%
ATCTTTCAACAACCCAATGA+TGG + Chr4:76301023-76301042 None:intergenic 35.0%
CTTAAGTAAAGGCTTCTCTT+TGG + Chr4:76301459-76301478 None:intergenic 35.0%
CTTTGGCATCTTTCATTGAA+GGG - Chr4:76303017-76303036 MsG0480022752.01.T01:CDS 35.0%
GACCTCAATAATTATTGTGC+CGG + Chr4:76303580-76303599 None:intergenic 35.0%
GGAAATTACCTGTCCATATA+AGG + Chr4:76302058-76302077 None:intergenic 35.0%
GGTATTATAGTAAAGCAACG+TGG - Chr4:76301872-76301891 MsG0480022752.01.T01:CDS 35.0%
GTAGCGAAGTGATATATGAT+TGG - Chr4:76302597-76302616 MsG0480022752.01.T01:intron 35.0%
GTCACACACATAAGAAATGA+TGG - Chr4:76301060-76301079 MsG0480022752.01.T01:intron 35.0%
GTCTAAATACAACAACACCA+AGG - Chr4:76302401-76302420 MsG0480022752.01.T01:CDS 35.0%
TAGCTGTTTAACTAGTGTCT+CGG - Chr4:76300289-76300308 MsG0480022752.01.T01:intron 35.0%
TCACACCAAAGTAAGATTTG+AGG + Chr4:76299892-76299911 None:intergenic 35.0%
TCGTTTCCATTTCCATAACT+TGG + Chr4:76302285-76302304 None:intergenic 35.0%
TCTTTGGCATCTTTCATTGA+AGG - Chr4:76303016-76303035 MsG0480022752.01.T01:CDS 35.0%
TGATTGGAGAAGATCTTCTT+TGG - Chr4:76303000-76303019 MsG0480022752.01.T01:CDS 35.0%
TTACCTATCTCTATTCCGAA+TGG + Chr4:76301213-76301232 None:intergenic 35.0%
TTCGAAGAATATGTCTCTTG+AGG + Chr4:76302147-76302166 None:intergenic 35.0%
TTGATTGCTATATGACCTCT+TGG + Chr4:76300937-76300956 None:intergenic 35.0%
! AACGTGGATTTCTTTGTTTC+AGG - Chr4:76301888-76301907 MsG0480022752.01.T01:CDS 35.0%
! AAGTGGTGACGTCAAATATT+TGG + Chr4:76303650-76303669 None:intergenic 35.0%
! AATGGGACTTTTCTACCTAT+TGG - Chr4:76302437-76302456 MsG0480022752.01.T01:CDS 35.0%
! AGATTTCAAGCTCCGTATTT+TGG + Chr4:76301715-76301734 None:intergenic 35.0%
! CATTTTATATGGAAGAGTCG+GGG - Chr4:76304497-76304516 MsG0480022752.01.T01:intron 35.0%
! CTAAGGTGTTAGATCTAGAT+CGG - Chr4:76300352-76300371 MsG0480022752.01.T01:intron 35.0%
! GCATTTTATATGGAAGAGTC+GGG - Chr4:76304496-76304515 MsG0480022752.01.T01:intron 35.0%
! GGCTCTCTAAAGATAAATGA+TGG - Chr4:76302360-76302379 MsG0480022752.01.T01:CDS 35.0%
! TAAGTTTCATGGAGAGGTAT+AGG + Chr4:76300997-76301016 None:intergenic 35.0%
! TCATTTATCTTTAGAGAGCC+TGG + Chr4:76302360-76302379 None:intergenic 35.0%
! TTATACACAGTGCAAGTTGA+AGG - Chr4:76301419-76301438 MsG0480022752.01.T01:intron 35.0%
!! AAGTTGAAGGAAGGTTTTGA+GGG - Chr4:76301432-76301451 MsG0480022752.01.T01:intron 35.0%
!! ACACAGTTAAATGGGTTGAT+TGG - Chr4:76301481-76301500 MsG0480022752.01.T01:intron 35.0%
!! ACTGTCCGTTTTTATTTCCT+TGG + Chr4:76301140-76301159 None:intergenic 35.0%
!! ATAGACTGTTGGTTCAAGAT+CGG + Chr4:76301746-76301765 None:intergenic 35.0%
!! CACAGTTAAATGGGTTGATT+GGG - Chr4:76301482-76301501 MsG0480022752.01.T01:intron 35.0%
!! GAATGTCTAAAGTGTTGATG+TGG + Chr4:76302477-76302496 None:intergenic 35.0%
!! GATTATGTTTTCAGGATGAG+AGG - Chr4:76302241-76302260 MsG0480022752.01.T01:intron 35.0%
!! TGTTAGACCTAGATTTGTTG+CGG - Chr4:76300017-76300036 MsG0480022752.01.T01:intron 35.0%
!!! CGTTAGTTTTCTCTCACATA+AGG + Chr4:76303546-76303565 None:intergenic 35.0%
!!! TTTTTTGGCAGATCAACATG+TGG - Chr4:76300735-76300754 MsG0480022752.01.T01:intron 35.0%
AAAAACTTGAGGCAAAAGGG+TGG + Chr4:76299950-76299969 None:intergenic 40.0%
AAAGCAACAGCATGTAGAAC+AGG + Chr4:76299862-76299881 None:intergenic 40.0%
AAATGTTAAGCAGTGTCTCC+GGG - Chr4:76300151-76300170 MsG0480022752.01.T01:intron 40.0%
AACAACACCAAGGAACACAT+TGG - Chr4:76302411-76302430 MsG0480022752.01.T01:CDS 40.0%
AATCCTGCAGATATTCCAGA+AGG - Chr4:76301231-76301250 MsG0480022752.01.T01:intron 40.0%
AATGTTATGCTGAGGAACAG+TGG - Chr4:76301108-76301127 MsG0480022752.01.T01:intron 40.0%
ACAAGTCTCCCATTTCAAAC+TGG - Chr4:76301979-76301998 MsG0480022752.01.T01:CDS 40.0%
ACATAGCCACCAGTTTGAAA+TGG + Chr4:76301991-76302010 None:intergenic 40.0%
AGCTGTTTAACTAGTGTCTC+GGG - Chr4:76300290-76300309 MsG0480022752.01.T01:intron 40.0%
AGGATATGAGGAGATATGGA+TGG - Chr4:76301251-76301270 MsG0480022752.01.T01:intron 40.0%
ATCTCTATTCCGAATGGATC+CGG + Chr4:76301207-76301226 None:intergenic 40.0%
ATCTTGCAGCACAAACCATA+AGG - Chr4:76301927-76301946 MsG0480022752.01.T01:CDS 40.0%
ATGGTTGTGTTCATGTGAAG+AGG - Chr4:76301956-76301975 MsG0480022752.01.T01:CDS 40.0%
ATGTGAGAGAAAACTAACGG+AGG - Chr4:76303547-76303566 MsG0480022752.01.T01:five_prime_UTR 40.0%
CAAGGAACACATTGGAGTAA+TGG - Chr4:76302419-76302438 MsG0480022752.01.T01:CDS 40.0%
CAGAAGGATATGAGGAGATA+TGG - Chr4:76301247-76301266 MsG0480022752.01.T01:intron 40.0%
CATATCTCCTCATATCCTTC+TGG + Chr4:76301249-76301268 None:intergenic 40.0%
CATCAACATTCAGGTGGAAT+TGG - Chr4:76302027-76302046 MsG0480022752.01.T01:CDS 40.0%
CATTACTCCAATGTGTTCCT+TGG + Chr4:76302421-76302440 None:intergenic 40.0%
CTTCGTGTATCACTAGAACA+CGG + Chr4:76302742-76302761 None:intergenic 40.0%
GAAATGTTAAGCAGTGTCTC+CGG - Chr4:76300150-76300169 MsG0480022752.01.T01:intron 40.0%
GAACTCAGATCATGATTGCA+AGG - Chr4:76301584-76301603 MsG0480022752.01.T01:three_prime_UTR 40.0%
GACCGGCACAATAATTATTG+AGG - Chr4:76303575-76303594 MsG0480022752.01.T01:five_prime_UTR 40.0%
GATCCATTCGGAATAGAGAT+AGG - Chr4:76301207-76301226 MsG0480022752.01.T01:intron 40.0%
TAATTCCTTAACTAGTGCCC+CGG + Chr4:76300172-76300191 None:intergenic 40.0%
TATCAACTGAGCTAAGCTCA+CGG + Chr4:76304468-76304487 None:intergenic 40.0%
TATGGAAATGGAAACGAAGC+TGG - Chr4:76302288-76302307 MsG0480022752.01.T01:intron 40.0%
TGGAGATAAGTTTCATGGAG+AGG + Chr4:76301003-76301022 None:intergenic 40.0%
! AAGGCTCCTCTTTCTAGAAA+GGG - Chr4:76303185-76303204 MsG0480022752.01.T01:CDS 40.0%
! ATATGTGGAGTGGAGTGTTA+TGG - Chr4:76302571-76302590 MsG0480022752.01.T01:intron 40.0%
! ATCTTTAGAGAGCCTGGTTT+AGG + Chr4:76302354-76302373 None:intergenic 40.0%
! CACAACCATTTTCCTCCTTA+TGG + Chr4:76301945-76301964 None:intergenic 40.0%
! CATAGCCACCAGTTTGAAAT+GGG + Chr4:76301990-76302009 None:intergenic 40.0%
! TAAGGCTCCTCTTTCTAGAA+AGG - Chr4:76303184-76303203 MsG0480022752.01.T01:CDS 40.0%
! TGAGCTTAGCTCAGTTGATA+GGG - Chr4:76304468-76304487 MsG0480022752.01.T01:intron 40.0%
! TGGTGACGTCAAATATTTGG+AGG + Chr4:76303647-76303666 None:intergenic 40.0%
!! AACAGCAAGAGTATTGCCAA+TGG + Chr4:76300785-76300804 None:intergenic 40.0%
!! CAAGTTGAAGGAAGGTTTTG+AGG - Chr4:76301431-76301450 MsG0480022752.01.T01:intron 40.0%
!! CAGAATTTTCAGGCATCCTT+TGG + Chr4:76301086-76301105 None:intergenic 40.0%
!! GCAATACTCTTGCTGTTGTT+TGG - Chr4:76300788-76300807 MsG0480022752.01.T01:intron 40.0%
!! TATCCTTCTGGAATATCTGC+AGG + Chr4:76301237-76301256 None:intergenic 40.0%
!! TATTTGGCTTGGCTAGCTAT+AGG - Chr4:76302677-76302696 MsG0480022752.01.T01:intron 40.0%
AACGAAGCTGGAAATGAGAC+AGG - Chr4:76302300-76302319 MsG0480022752.01.T01:CDS 45.0%
AACTAACGGAGGAACAAGAC+CGG - Chr4:76303558-76303577 MsG0480022752.01.T01:five_prime_UTR 45.0%
AATGAGACAGGCTACGTTGT+AGG - Chr4:76302312-76302331 MsG0480022752.01.T01:CDS 45.0%
AATGTTAAGCAGTGTCTCCG+GGG - Chr4:76300152-76300171 MsG0480022752.01.T01:intron 45.0%
ACCGATATTCCGGATCCATT+CGG - Chr4:76301195-76301214 MsG0480022752.01.T01:intron 45.0%
ACGCAATCGACATAGACTGT+TGG + Chr4:76301757-76301776 None:intergenic 45.0%
ACTGGTGGCTATGTGATCTA+TGG - Chr4:76301997-76302016 MsG0480022752.01.T01:CDS 45.0%
AGGAACAGTGGTATATGCCA+AGG - Chr4:76301120-76301139 MsG0480022752.01.T01:intron 45.0%
AGGTCCTAGCTCAAATTTGG+GGG + Chr4:76300875-76300894 None:intergenic 45.0%
AGTCTCCCATTTCAAACTGG+TGG - Chr4:76301982-76302001 MsG0480022752.01.T01:CDS 45.0%
ATCAACTGAGCTAAGCTCAC+GGG + Chr4:76304467-76304486 None:intergenic 45.0%
CACTGCATTGCATGCATGAT+TGG - Chr4:76302984-76303003 MsG0480022752.01.T01:CDS 45.0%
CAGGTCCTAGCTCAAATTTG+GGG + Chr4:76300876-76300895 None:intergenic 45.0%
CCAGGTCCTAGCTCAAATTT+GGG + Chr4:76300877-76300896 None:intergenic 45.0%
CTTCAATTCAGCATAGGGAC+CGG - Chr4:76302931-76302950 MsG0480022752.01.T01:CDS 45.0%
GCTGTTTAACTAGTGTCTCG+GGG - Chr4:76300291-76300310 MsG0480022752.01.T01:intron 45.0%
GGAATTGGGTCCACCTTATA+TGG - Chr4:76302042-76302061 MsG0480022752.01.T01:CDS 45.0%
GGGTCATGATATGTGTCTTG+AGG + Chr4:76303453-76303472 None:intergenic 45.0%
GTGAGCTTAGCTCAGTTGAT+AGG - Chr4:76304467-76304486 MsG0480022752.01.T01:intron 45.0%
GTTGCTCATCAACATTCAGG+TGG - Chr4:76302021-76302040 MsG0480022752.01.T01:CDS 45.0%
TCCACCTGTTATCCTAAACC+AGG - Chr4:76302339-76302358 MsG0480022752.01.T01:CDS 45.0%
TCCAGGTCCTAGCTCAAATT+TGG + Chr4:76300878-76300897 None:intergenic 45.0%
TCCGAATGGATCCGGAATAT+CGG + Chr4:76301199-76301218 None:intergenic 45.0%
TCTTATGTTGTGGGGACAAG+CGG + Chr4:76304392-76304411 None:intergenic 45.0%
TGTAGAGTCTCGAGAATGCA+AGG - Chr4:76301780-76301799 MsG0480022752.01.T01:three_prime_UTR 45.0%
TTCCCAAAAGAACCTGAGCA+TGG + Chr4:76300818-76300837 None:intergenic 45.0%
TTGCAGCACAAACCATAAGG+AGG - Chr4:76301930-76301949 MsG0480022752.01.T01:CDS 45.0%
TTGTCCCCCAAATTTGAGCT+AGG - Chr4:76300868-76300887 MsG0480022752.01.T01:intron 45.0%
! ACACAGTGCAAGTTGAAGGA+AGG - Chr4:76301423-76301442 MsG0480022752.01.T01:intron 45.0%
! ACACCATGCTCAGGTTCTTT+TGG - Chr4:76300812-76300831 MsG0480022752.01.T01:intron 45.0%
! AGAGCCTGGTTTAGGATAAC+AGG + Chr4:76302346-76302365 None:intergenic 45.0%
! CACCATGCTCAGGTTCTTTT+GGG - Chr4:76300813-76300832 MsG0480022752.01.T01:intron 45.0%
! GGGACTTTTCTACCTATTGG+TGG - Chr4:76302440-76302459 MsG0480022752.01.T01:intron 45.0%
! TGGATCTGAAACACGAGGAA+CGG - Chr4:76301170-76301189 MsG0480022752.01.T01:intron 45.0%
!! AGACCTAGATTTGTTGCGGT+CGG - Chr4:76300021-76300040 MsG0480022752.01.T01:intron 45.0%
!! GAGCTTAGCTCAGTTGATAG+GGG - Chr4:76304469-76304488 MsG0480022752.01.T01:intron 45.0%
!! GCTGAAGTAGTTGATGAAGC+TGG - Chr4:76300967-76300986 MsG0480022752.01.T01:intron 45.0%
!! GGTGTTGCTCATCAACATTC+AGG - Chr4:76302018-76302037 MsG0480022752.01.T01:CDS 45.0%
!!! ATTACTAATAAATATTTTTT+TGG - Chr4:76300720-76300739 MsG0480022752.01.T01:intron 5.0%
!!! TTTGTAATATTATTATTTTT+TGG - Chr4:76302762-76302781 MsG0480022752.01.T01:intron 5.0%
!!! TTTTTTCTTAATTATAATTA+AGG + Chr4:76304318-76304337 None:intergenic 5.0%
AACGGACAGTACTTTGGGCT+TGG - Chr4:76301150-76301169 MsG0480022752.01.T01:intron 50.0%
AGGAACGGTGACCGATATTC+CGG - Chr4:76301185-76301204 MsG0480022752.01.T01:intron 50.0%
CCCAAATTTGAGCTAGGACC+TGG - Chr4:76300874-76300893 MsG0480022752.01.T01:intron 50.0%
CTTATGTTGTGGGGACAAGC+GGG + Chr4:76304391-76304410 None:intergenic 50.0%
GCGGTGTGGAGGATAAGTTA+GGG - Chr4:76301298-76301317 MsG0480022752.01.T01:intron 50.0%
GGGATTCGAACCCTAAACAC+TGG - Chr4:76304517-76304536 MsG0480022752.01.T01:intron 50.0%
GTTCATGCCATTGATACGCG+CGG - Chr4:76301279-76301298 MsG0480022752.01.T01:intron 50.0%
TGGGTCCACCTTATATGGAC+AGG - Chr4:76302047-76302066 MsG0480022752.01.T01:CDS 50.0%
TTATGTTGTGGGGACAAGCG+GGG + Chr4:76304390-76304409 None:intergenic 50.0%
TTGTTTGGCACACCATGCTC+AGG - Chr4:76300803-76300822 MsG0480022752.01.T01:intron 50.0%
! GCCTGGTTTAGGATAACAGG+TGG + Chr4:76302343-76302362 None:intergenic 50.0%
CGCGGTGTGGAGGATAAGTT+AGG - Chr4:76301297-76301316 MsG0480022752.01.T01:intron 55.0%
CTGCCGACCGCAACAAATCT+AGG + Chr4:76300027-76300046 None:intergenic 55.0%
GGAGCTGTTCTGCCACCAAT+AGG + Chr4:76302455-76302474 None:intergenic 55.0%
TAGAGAGCAAGCCACATCCG+TGG + Chr4:76302957-76302976 None:intergenic 55.0%
TCTTGTTAACGAGTGCCCCC+GGG - Chr4:76303040-76303059 MsG0480022752.01.T01:CDS 55.0%
! GGGCTTGGATCTGAAACACG+AGG - Chr4:76301165-76301184 MsG0480022752.01.T01:intron 55.0%
! GTCTTGTTAACGAGTGCCCC+CGG - Chr4:76303039-76303058 MsG0480022752.01.T01:CDS 55.0%
! TGTCTCCGGGGCACTAGTTA+AGG - Chr4:76300164-76300183 MsG0480022752.01.T01:intron 55.0%
!! ATGCTTAAAGAGTGCCCCGG+GGG + Chr4:76303058-76303077 None:intergenic 55.0%
!! CTAGATTTGTTGCGGTCGGC+AGG - Chr4:76300025-76300044 MsG0480022752.01.T01:intron 55.0%
!! GATGCTTAAAGAGTGCCCCG+GGG + Chr4:76303059-76303078 None:intergenic 55.0%
!! GGATGCTTAAAGAGTGCCCC+GGG + Chr4:76303060-76303079 None:intergenic 55.0%
!! GGGATGCTTAAAGAGTGCCC+CGG + Chr4:76303061-76303080 None:intergenic 55.0%
CATTGATACGCGCGGTGTGG+AGG - Chr4:76301287-76301306 MsG0480022752.01.T01:intron 60.0%
CTCCACACCGCGCGTATCAA+TGG + Chr4:76301289-76301308 None:intergenic 60.0%
CTTGTTAACGAGTGCCCCCG+GGG - Chr4:76303041-76303060 MsG0480022752.01.T01:CDS 60.0%
TGATGTGGGCATAGCGAGCC+AGG - Chr4:76304124-76304143 MsG0480022752.01.T01:intron 60.0%
TGCCATTGATACGCGCGGTG+TGG - Chr4:76301284-76301303 MsG0480022752.01.T01:intron 60.0%
TTCAGCATAGGGACCGGCCA+CGG - Chr4:76302937-76302956 MsG0480022752.01.T01:CDS 60.0%
ATAGGGACCGGCCACGGATG+TGG - Chr4:76302943-76302962 MsG0480022752.01.T01:CDS 65.0%
GAGCAAGCCACATCCGTGGC+CGG + Chr4:76302953-76302972 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
Chr4 gene 76299831 76304537 76299831 ID=MsG0480022752.01;Name=MsG0480022752.01
Chr4 mRNA 76299831 76304537 76299831 ID=MsG0480022752.01.T01;Parent=MsG0480022752.01;Name=MsG0480022752.01.T01;_AED=0.47;_eAED=0.47;_QI=364|1|1|1|0.5|0.2|5|408|316
Chr4 exon 76302763 76303622 76302763 ID=MsG0480022752.01.T01:exon:4733;Parent=MsG0480022752.01.T01
Chr4 exon 76304518 76304537 76304518 ID=MsG0480022752.01.T01:exon:4732;Parent=MsG0480022752.01.T01
Chr4 five_prime_UTR 76304518 76304537 76304518 ID=MsG0480022752.01.T01:five_prime_utr;Parent=MsG0480022752.01.T01
Chr4 five_prime_UTR 76303279 76303622 76303279 ID=MsG0480022752.01.T01:five_prime_utr;Parent=MsG0480022752.01.T01
Chr4 CDS 76302763 76303278 76302763 ID=MsG0480022752.01.T01:cds;Parent=MsG0480022752.01.T01
Chr4 CDS 76302300 76302458 76302300 ID=MsG0480022752.01.T01:cds;Parent=MsG0480022752.01.T01
Chr4 CDS 76301838 76302113 76301838 ID=MsG0480022752.01.T01:cds;Parent=MsG0480022752.01.T01
Chr4 three_prime_UTR 76301557 76301837 76301557 ID=MsG0480022752.01.T01:three_prime_utr;Parent=MsG0480022752.01.T01
Chr4 three_prime_UTR 76299831 76299957 76299831 ID=MsG0480022752.01.T01:three_prime_utr;Parent=MsG0480022752.01.T01
Chr4 mRNA 76299831 76303754 76299831 ID=MsG0480022752.01.T02;Parent=MsG0480022752.01;Name=MsG0480022752.01.T02;_AED=0.46;_eAED=0.46;_QI=476|1|1|1|0.66|0.5|4|408|316
Chr4 exon 76302763 76303754 76302763 ID=MsG0480022752.01.T02:exon:4737;Parent=MsG0480022752.01.T02
Chr4 five_prime_UTR 76303279 76303754 76303279 ID=MsG0480022752.01.T02:five_prime_utr;Parent=MsG0480022752.01.T02
Chr4 CDS 76302763 76303278 76302763 ID=MsG0480022752.01.T02:cds;Parent=MsG0480022752.01.T02
Chr4 CDS 76302300 76302458 76302300 ID=MsG0480022752.01.T02:cds;Parent=MsG0480022752.01.T02
Chr4 CDS 76301838 76302113 76301838 ID=MsG0480022752.01.T02:cds;Parent=MsG0480022752.01.T02
Chr4 three_prime_UTR 76301557 76301837 76301557 ID=MsG0480022752.01.T02:three_prime_utr;Parent=MsG0480022752.01.T02
Chr4 three_prime_UTR 76299831 76299957 76299831 ID=MsG0480022752.01.T02:three_prime_utr;Parent=MsG0480022752.01.T02
Gene Sequence

>MsG0480022752.01.T01

ATGCCTGAAAATTCTGATAATGTTATGCTGAGGAACAGTGGTATATGCCAAGGAAATAAAAACGGACAGTACTTTGGGCTTGGATCTGAAACACGAGGAACGGTGACCGATATTCCGGATCCATTCGGAATAGAGATAGGTAATCCTGCAGATATTCCAGAAGGATATGAGGAGATATGGATGGTAAACGTTCATGCCATTGATACGCGCGGTGTGGAGGATAAGTTAGGGTGCACTGAGTGTAAGTGTGACCTTTATAATGTTACAGTTGATGAATATGGAAGGTCAATAAGGTCAGATTATAAAGGAGGCGTGTTATGTTGTTACGATTATACACAGTGCAAGTTGAAGGAAGGTTTTGAGGGTCCAAAGAGAAGCCTTTACTTAAGATACACAGTTAAATGGGTTGATTGGGATGATTTTATAGTGGCTGTTAAGATATATATAATTGATGTTACTGATACTTTGAAACTATCAGATGATTCAAAAGGAATGAACTCAGATCATGATTGCAAGGTTGAGTATCAAGTTGAATCTTGCAGCACAAACCATAAGGAGGAAAATGGTTGTGTTCATGTGAAGAGGACAAGTCTCCCATTTCAAACTGGTGGCTATGTGATCTATGGTGTTGCTCATCAACATTCAGGTGGAATTGGGTCCACCTTATATGGACAGGATGAGAGGGTTATATGTTCTTCAATACCAAGTTATGGAAATGGAAACGAAGCTGGAAATGAGACAGGCTACGTTGTAGGAATGTCCACCTGTTATCCTAAACCAGGCTCTCTAAAGATAAATGATGGTGAAACTTTAACGCTAGAGTCTAAATACAACAACACCAAGGAACACATTGGAGTAATGGGACTTTTCTACCTATTGGTGGCAGAACAGCTCCCACATCAACACTTTAGACATTCTACTCGTTCTTCATTTTTTATGGATATAATGTAA

>MsG0480022752.01.T02

ATGCCTGAAAATTCTGATAATGTTATGCTGAGGAACAGTGGTATATGCCAAGGAAATAAAAACGGACAGTACTTTGGGCTTGGATCTGAAACACGAGGAACGGTGACCGATATTCCGGATCCATTCGGAATAGAGATAGGTAATCCTGCAGATATTCCAGAAGGATATGAGGAGATATGGATGGTAAACGTTCATGCCATTGATACGCGCGGTGTGGAGGATAAGTTAGGGTGCACTGAGTGTAAGTGTGACCTTTATAATGTTACAGTTGATGAATATGGAAGGTCAATAAGGTCAGATTATAAAGGAGGCGTGTTATGTTGTTACGATTATACACAGTGCAAGTTGAAGGAAGGTTTTGAGGGTCCAAAGAGAAGCCTTTACTTAAGATACACAGTTAAATGGGTTGATTGGGATGATTTTATAGTGGCTGTTAAGATATATATAATTGATGTTACTGATACTTTGAAACTATCAGATGATTCAAAAGGAATGAACTCAGATCATGATTGCAAGGTTGAGTATCAAGTTGAATCTTGCAGCACAAACCATAAGGAGGAAAATGGTTGTGTTCATGTGAAGAGGACAAGTCTCCCATTTCAAACTGGTGGCTATGTGATCTATGGTGTTGCTCATCAACATTCAGGTGGAATTGGGTCCACCTTATATGGACAGGATGAGAGGGTTATATGTTCTTCAATACCAAGTTATGGAAATGGAAACGAAGCTGGAAATGAGACAGGCTACGTTGTAGGAATGTCCACCTGTTATCCTAAACCAGGCTCTCTAAAGATAAATGATGGTGAAACTTTAACGCTAGAGTCTAAATACAACAACACCAAGGAACACATTGGAGTAATGGGACTTTTCTACCTATTGGTGGCAGAACAGCTCCCACATCAACACTTTAGACATTCTACTCGTTCTTCATTTTTTATGGATATAATGTAA

Protein sequence

>MsG0480022752.01.T01

MPENSDNVMLRNSGICQGNKNGQYFGLGSETRGTVTDIPDPFGIEIGNPADIPEGYEEIWMVNVHAIDTRGVEDKLGCTECKCDLYNVTVDEYGRSIRSDYKGGVLCCYDYTQCKLKEGFEGPKRSLYLRYTVKWVDWDDFIVAVKIYIIDVTDTLKLSDDSKGMNSDHDCKVEYQVESCSTNHKEENGCVHVKRTSLPFQTGGYVIYGVAHQHSGGIGSTLYGQDERVICSSIPSYGNGNEAGNETGYVVGMSTCYPKPGSLKINDGETLTLESKYNNTKEHIGVMGLFYLLVAEQLPHQHFRHSTRSSFFMDIM*

>MsG0480022752.01.T02

MPENSDNVMLRNSGICQGNKNGQYFGLGSETRGTVTDIPDPFGIEIGNPADIPEGYEEIWMVNVHAIDTRGVEDKLGCTECKCDLYNVTVDEYGRSIRSDYKGGVLCCYDYTQCKLKEGFEGPKRSLYLRYTVKWVDWDDFIVAVKIYIIDVTDTLKLSDDSKGMNSDHDCKVEYQVESCSTNHKEENGCVHVKRTSLPFQTGGYVIYGVAHQHSGGIGSTLYGQDERVICSSIPSYGNGNEAGNETGYVVGMSTCYPKPGSLKINDGETLTLESKYNNTKEHIGVMGLFYLLVAEQLPHQHFRHSTRSSFFMDIM*