AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0180000391.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180000391.01.T01 MTR_1g016880 82.843 204 7 1 1 204 82 257 5.38e-118 344
MsG0180000391.01.T01 MTR_8g015500 62.621 206 49 1 1 206 119 296 2.67e-89 272
MsG0180000391.01.T01 MTR_1g110290 51.942 206 71 1 1 206 100 277 4.04e-70 223
MsG0180000391.01.T01 MTR_5g055480 51.724 203 70 1 1 203 98 272 2.73e-69 220
MsG0180000391.01.T01 MTR_2g005350 51.471 204 71 1 1 204 144 319 1.51e-68 219
MsG0180000391.01.T01 MTR_5g006930 51.471 204 70 2 1 203 92 267 8.39e-67 213
MsG0180000391.01.T01 MTR_6g083830 50.000 204 73 2 1 203 125 300 4.09e-65 210
MsG0180000391.01.T01 MTR_5g006920 50.490 204 72 2 1 203 127 302 1.35e-63 206
MsG0180000391.01.T01 MTR_3g104840 44.608 204 67 3 1 203 117 275 5.36e-50 170
MsG0180000391.01.T01 MTR_1g009960 41.379 203 88 3 2 203 87 259 1.07e-41 148
MsG0180000391.01.T01 MTR_3g108740 40.488 205 89 5 1 203 67 240 1.40e-41 147
MsG0180000391.01.T01 MTR_4g127550 39.901 203 91 3 2 203 83 255 1.91e-41 147
MsG0180000391.01.T01 MTR_1g009960 40.686 204 90 3 1 203 86 259 2.09e-41 147
MsG0180000391.01.T01 MTR_2g037620 43.333 180 70 3 25 203 97 245 5.04e-41 146
MsG0180000391.01.T01 MTR_2g037600 43.333 180 71 4 25 203 105 254 1.37e-39 142
MsG0180000391.01.T01 MTR_2g024120 39.815 216 92 6 10 222 46 226 4.29e-38 138
MsG0180000391.01.T01 MTR_8g094180 40.449 178 74 3 25 200 55 202 3.84e-36 132
MsG0180000391.01.T01 MTR_8g094180 40.449 178 74 3 25 200 55 202 7.54e-36 132
MsG0180000391.01.T01 MTR_3g106930 35.556 180 83 5 26 200 95 246 3.98e-21 92.4
MsG0180000391.01.T01 MTR_1g031060 34.286 140 62 3 25 163 80 190 5.61e-13 68.9
MsG0180000391.01.T01 MTR_1g048320 30.612 196 91 7 25 204 64 230 5.70e-13 68.6
MsG0180000391.01.T01 MTR_2g087610 31.863 204 85 9 26 203 78 253 1.90e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180000391.01.T01 AT5G11730 64.532 203 44 1 1 203 93 267 2.24e-90 274
MsG0180000391.01.T01 AT5G25970 61.650 206 51 1 1 206 94 271 1.22e-85 262
MsG0180000391.01.T01 AT5G25970 61.650 206 51 1 1 206 94 271 1.22e-85 262
MsG0180000391.01.T01 AT5G25970 61.650 206 51 1 1 206 94 271 1.22e-85 262
MsG0180000391.01.T01 AT3G21310 56.828 227 60 4 1 227 90 278 5.22e-80 247
MsG0180000391.01.T01 AT3G21310 56.828 227 60 4 1 227 90 278 5.22e-80 247
MsG0180000391.01.T01 AT3G21310 59.259 189 49 2 1 189 90 250 4.95e-74 228
MsG0180000391.01.T01 AT1G51770 54.902 204 64 1 1 204 99 274 2.43e-73 231
MsG0180000391.01.T01 AT1G68390 53.202 203 67 1 1 203 113 287 7.43e-69 219
MsG0180000391.01.T01 AT1G10280 51.961 204 70 2 1 204 118 293 5.93e-67 214
MsG0180000391.01.T01 AT1G68380 51.232 203 69 2 1 203 99 271 1.08e-63 206
MsG0180000391.01.T01 AT1G10880 47.573 206 75 3 1 204 94 268 7.81e-63 203
MsG0180000391.01.T01 AT5G16170 51.934 181 59 1 26 206 136 288 9.95e-60 196
MsG0180000391.01.T01 AT1G51770 47.059 204 53 2 1 204 99 247 7.90e-55 182
MsG0180000391.01.T01 AT1G73810 47.115 208 77 4 1 206 125 301 1.86e-54 182
MsG0180000391.01.T01 AT4G31350 42.932 191 77 3 15 203 76 236 8.41e-44 153
MsG0180000391.01.T01 AT4G31350 42.932 191 77 3 15 203 76 236 8.41e-44 153
MsG0180000391.01.T01 AT4G31350 42.932 191 77 3 15 203 76 236 8.41e-44 153
MsG0180000391.01.T01 AT4G31350 41.885 191 74 3 15 203 76 231 2.37e-41 147
MsG0180000391.01.T01 AT4G30060 40.887 203 89 4 2 203 84 256 2.81e-41 147
MsG0180000391.01.T01 AT4G30060 40.887 203 89 4 2 203 84 256 2.81e-41 147
MsG0180000391.01.T01 AT2G19160 39.614 207 86 6 2 203 81 253 2.58e-40 144
MsG0180000391.01.T01 AT2G19160 39.614 207 86 6 2 203 81 253 2.58e-40 144
MsG0180000391.01.T01 AT4G25870 37.931 203 95 3 2 203 74 246 1.15e-39 143
MsG0180000391.01.T01 AT5G57270 41.011 178 75 2 26 203 98 245 1.82e-39 142
MsG0180000391.01.T01 AT5G57270 41.011 178 75 2 26 203 98 245 1.82e-39 142
MsG0180000391.01.T01 AT5G57270 41.011 178 75 2 26 203 98 245 1.82e-39 142
MsG0180000391.01.T01 AT5G57270 41.011 178 75 2 26 203 98 245 1.82e-39 142
MsG0180000391.01.T01 AT5G57270 41.011 178 75 2 26 203 98 245 1.82e-39 142
MsG0180000391.01.T01 AT5G14550 38.095 189 89 3 16 204 55 215 4.81e-36 132
MsG0180000391.01.T01 AT5G14550 38.095 189 89 3 16 204 55 215 3.33e-35 130
MsG0180000391.01.T01 AT5G14550 38.095 189 89 3 16 204 55 215 4.51e-35 130
MsG0180000391.01.T01 AT5G14550 36.893 206 93 5 16 212 55 232 1.27e-33 126
MsG0180000391.01.T01 AT1G11940 38.806 201 85 6 25 222 73 238 1.52e-33 124
MsG0180000391.01.T01 AT1G11940 38.806 201 85 6 25 222 73 238 5.99e-33 125
MsG0180000391.01.T01 AT1G62305 39.796 196 82 6 11 203 56 218 1.51e-32 122
MsG0180000391.01.T01 AT1G62305 39.796 196 82 6 11 203 56 218 2.15e-32 123
MsG0180000391.01.T01 AT5G25330 38.462 208 86 8 3 200 60 235 2.23e-22 95.9
MsG0180000391.01.T01 AT3G52060 36.898 187 83 8 25 204 74 232 3.34e-21 92.4
MsG0180000391.01.T01 AT1G62305 33.673 196 70 7 11 203 56 194 1.95e-18 84.7
MsG0180000391.01.T01 AT5G22070 32.673 202 83 7 26 201 71 245 4.00e-15 75.1
MsG0180000391.01.T01 AT4G32290 30.688 189 96 5 18 200 85 244 3.46e-13 69.7

Find 71 sgRNAs with CRISPR-Local

Find 591 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGCACCGACGAAGCTGAATT+TGG 0.205834 1:+5370157 None:intergenic
CATTGCCTCTTGCACCTGTT+TGG 0.243558 1:-5375222 MsG0180000391.01.T01:CDS
ACTTCTTTGGAGAGCTTCTT+TGG 0.250935 1:-5375314 MsG0180000391.01.T01:CDS
AAAGGGTAATTCTTAATCTT+AGG 0.260696 1:+5375289 None:intergenic
CGCCTAAAACTAACACAAAA+AGG 0.279994 1:+5365826 None:intergenic
CTTGTGGAAGGGATAGATTT+AGG 0.284977 1:-5365918 MsG0180000391.01.T01:intron
TGAGTGATAAAGAACTTCTT+TGG 0.293369 1:-5375327 MsG0180000391.01.T01:CDS
GCTGAGGGAGTGTTGTTCTT+TGG 0.293809 1:-5365687 MsG0180000391.01.T01:CDS
ATTGCCTCTTGCACCTGTTT+GGG 0.296741 1:-5375221 MsG0180000391.01.T01:CDS
TTGTGGAAGGGATAGATTTA+GGG 0.303406 1:-5365917 MsG0180000391.01.T01:intron
CGCAGCGACGTTTGCACACT+TGG 0.311574 1:-5365720 MsG0180000391.01.T01:CDS
TTGACTAGAGGGGCCATGTT+TGG 0.342155 1:+5370095 None:intergenic
GTTGGTTTGACGATAATCTA+TGG 0.345449 1:-5365887 MsG0180000391.01.T01:CDS
AGGAACATAAAAGCAATCTT+AGG 0.357395 1:+5375256 None:intergenic
TGACTAGAGGGGCCATGTTT+GGG 0.361044 1:+5370096 None:intergenic
CTCTAGTCAACGTTACAAAA+TGG 0.364473 1:-5370082 MsG0180000391.01.T01:CDS
GGTTAATGTTTAATGCACTA+TGG 0.379287 1:+5371660 None:intergenic
ATCTTAGGAACTCTTTCAAA+AGG 0.395819 1:+5375271 None:intergenic
ATTAGCAAGTAGTCTTCTTT+CGG 0.401766 1:+5370277 None:intergenic
TGGAGATGTGTCAGTTAGGT+GGG 0.405332 1:-5365767 MsG0180000391.01.T01:CDS
GTCGGTGCATTTGATGATCC+TGG 0.408642 1:-5370143 MsG0180000391.01.T01:CDS
CTCTTGCACCTGTTTGGGAG+AGG 0.412242 1:-5375216 MsG0180000391.01.T01:CDS
TCTTGTTCAGATTGCTGAGT+GGG 0.414497 1:-5370321 MsG0180000391.01.T01:intron
TTCAGAAACCTCTCCCAAAC+AGG 0.428489 1:+5375208 None:intergenic
CAAAATATACATACCTGACT+AGG 0.457704 1:+5375091 None:intergenic
AACAGATGAAGGAGGAAACT+TGG 0.460141 1:+5375132 None:intergenic
CAATAGAATAAACCGCTCAT+TGG 0.469034 1:+5370238 None:intergenic
GGAAACTTGGCTTGATAAGA+AGG 0.470311 1:+5375145 None:intergenic
TAAGAGACAAATCCCTAGTC+AGG 0.472658 1:-5375104 MsG0180000391.01.T01:intron
GTCGTGGATGATGGAATAGT+TGG 0.475664 1:-5365861 MsG0180000391.01.T01:CDS
TAGATTTAGGGGTTGAGAGT+TGG 0.489574 1:-5365905 MsG0180000391.01.T01:CDS
TTGGCTTGATAAGAAGGAGT+TGG 0.500843 1:+5375151 None:intergenic
CTATGGATGGTCGTGGATGA+TGG 0.501867 1:-5365870 MsG0180000391.01.T01:CDS
CGTCCTCTTCCGTATGGACC+AGG 0.503162 1:+5370125 None:intergenic
GTTGTGGAGATGTGTCAGTT+AGG 0.505247 1:-5365771 MsG0180000391.01.T01:CDS
TTTGGGAGAGGTTTCTGAAA+GGG 0.509717 1:-5375204 MsG0180000391.01.T01:CDS
GTGGAGATGTGTCAGTTAGG+TGG 0.509970 1:-5365768 MsG0180000391.01.T01:CDS
GTAGAGAGGGATACATGATT+CGG 0.512493 1:+5370214 None:intergenic
TGATGGAATAGTTGGGTGGA+TGG 0.514776 1:-5365853 MsG0180000391.01.T01:CDS
GAGGCAATGGTCCTTTAGTA+AGG 0.515491 1:+5375236 None:intergenic
CTAGACTGAATTTGTAGAGA+GGG 0.522832 1:+5370201 None:intergenic
TCGTGGATGATGGAATAGTT+GGG 0.532738 1:-5365860 MsG0180000391.01.T01:CDS
TTGTAGCGTCCTCTTCCGTA+TGG 0.537017 1:+5370119 None:intergenic
TCTTAGGAACTCTTTCAAAA+GGG 0.537953 1:+5375272 None:intergenic
TTCAGATTGCTGAGTGGGGA+AGG 0.538958 1:-5370316 MsG0180000391.01.T01:intron
CTCTCCCAAACAGGTGCAAG+AGG 0.544373 1:+5375217 None:intergenic
AACGTTACAAAATGGCGTAA+AGG 0.547258 1:-5370074 MsG0180000391.01.T01:CDS
GACTAAAGTGTTGATTGTTG+TGG 0.548067 1:-5365787 MsG0180000391.01.T01:CDS
CTTGTTCAGATTGCTGAGTG+GGG 0.555008 1:-5370320 MsG0180000391.01.T01:intron
TTTGATGATCCTGGTCCATA+CGG 0.557830 1:-5370134 MsG0180000391.01.T01:CDS
TGTGTCAGTTAGGTGGGGTG+AGG 0.559691 1:-5365761 MsG0180000391.01.T01:CDS
GATCCTGGTCCATACGGAAG+AGG 0.560466 1:-5370128 MsG0180000391.01.T01:CDS
GACACGATTTGCAGCATCTG+TGG 0.564685 1:+5371616 None:intergenic
AAATCCAAATTCAGCTTCGT+CGG 0.569207 1:-5370161 MsG0180000391.01.T01:CDS
CAAACAGGTGCAAGAGGCAA+TGG 0.572308 1:+5375223 None:intergenic
GTTTGACGATAATCTATGGA+TGG 0.572896 1:-5365883 MsG0180000391.01.T01:CDS
CGATAATCTATGGATGGTCG+TGG 0.577620 1:-5365877 MsG0180000391.01.T01:CDS
TGTGGAAGGGATAGATTTAG+GGG 0.582250 1:-5365916 MsG0180000391.01.T01:intron
AGCGACGTTTGCACACTTGG+AGG 0.590302 1:-5365717 MsG0180000391.01.T01:CDS
AAAATATACATACCTGACTA+GGG 0.593555 1:+5375092 None:intergenic
GTTTGGGAGAGGTTTCTGAA+AGG 0.596050 1:-5375205 MsG0180000391.01.T01:CDS
TTCTTGTTCAGATTGCTGAG+TGG 0.597688 1:-5370322 MsG0180000391.01.T01:intron
TACTTGACATCTCCAATGAG+CGG 0.613960 1:-5370250 MsG0180000391.01.T01:CDS
GGAGATGTGTCAGTTAGGTG+GGG 0.614115 1:-5365766 MsG0180000391.01.T01:CDS
ACTTGGAGGAAGACTTGCTG+AGG 0.628133 1:-5365703 MsG0180000391.01.T01:CDS
AGGACGCTACAACCCAAACA+TGG 0.648045 1:-5370108 MsG0180000391.01.T01:CDS
ACTAGACTGAATTTGTAGAG+AGG 0.654314 1:+5370200 None:intergenic
TGCATTAAACATTAACCTCG+CGG 0.657781 1:-5371654 MsG0180000391.01.T01:CDS
CTTGGAGGAAGACTTGCTGA+GGG 0.674100 1:-5365702 MsG0180000391.01.T01:CDS
TGGATGATGGAATAGTTGGG+TGG 0.676174 1:-5365857 MsG0180000391.01.T01:CDS
AGTCTAGTGCTAAAACCGCG+AGG 0.787132 1:+5371639 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAATTAGAATCTAAAAAT+TGG + Chr1:5373025-5373044 None:intergenic 10.0%
!! AAAATATATAAAGTAAAAGT+CGG - Chr1:5372572-5372591 MsG0180000391.01.T01:intron 10.0%
!! ATATATAATAAAAAACTGAA+AGG - Chr1:5371862-5371881 MsG0180000391.01.T01:intron 10.0%
!! TTTAAATATTTACGAAAAAA+GGG + Chr1:5371902-5371921 None:intergenic 10.0%
!! TTTATAATAATAAGTAACAA+AGG - Chr1:5373042-5373061 MsG0180000391.01.T01:intron 10.0%
!!! AAACTAGAAATTTTATTATA+TGG - Chr1:5371367-5371386 MsG0180000391.01.T01:intron 10.0%
!!! AATAAATCGAATTTTAATTA+AGG + Chr1:5371978-5371997 None:intergenic 10.0%
!!! AATTAAAATTCGATTTATTT+TGG - Chr1:5371979-5371998 MsG0180000391.01.T01:intron 10.0%
!!! ATAAATCGAATTTTAATTAA+GGG + Chr1:5371977-5371996 None:intergenic 10.0%
!!! ATAAATTTTATTTTAGAACT+AGG + Chr1:5374444-5374463 None:intergenic 10.0%
!!! CTTTTACTTTATATATTTTT+AGG + Chr1:5372571-5372590 None:intergenic 10.0%
!!! GAAAACTATTTTTTTTATAA+AGG - Chr1:5372962-5372981 MsG0180000391.01.T01:intron 10.0%
!!! TACTTAATTTTTTAGTTTTA+TGG - Chr1:5371554-5371573 MsG0180000391.01.T01:intron 10.0%
!!! TTTTAAATATTTACGAAAAA+AGG + Chr1:5371903-5371922 None:intergenic 10.0%
!!! TTTTTTCGTAAATATTTAAA+AGG - Chr1:5371902-5371921 MsG0180000391.01.T01:intron 10.0%
!! AGAAGTTAATAATGTTTAAT+TGG - Chr1:5365959-5365978 MsG0180000391.01.T01:intron 15.0%
!! ATAAATAAATACATATCACT+TGG - Chr1:5367132-5367151 MsG0180000391.01.T01:intron 15.0%
!! CAAAAAGAAAAAAAAATGTT+TGG + Chr1:5372161-5372180 None:intergenic 15.0%
!! CTAAAACCTTAAATTATTAA+AGG - Chr1:5367171-5367190 MsG0180000391.01.T01:intron 15.0%
!! TCATAAAAACTTACTATTTA+AGG - Chr1:5368708-5368727 MsG0180000391.01.T01:intron 15.0%
!! TTAAATATTTACGAAAAAAG+GGG + Chr1:5371901-5371920 None:intergenic 15.0%
!!! AAAATCACTTTTTCAATAAA+AGG - Chr1:5374173-5374192 MsG0180000391.01.T01:intron 15.0%
!!! AATTAGTTTTACAAGTTTAT+AGG - Chr1:5367871-5367890 MsG0180000391.01.T01:intron 15.0%
!!! ATGCAATATTTCTTTTTTTA+AGG + Chr1:5374501-5374520 None:intergenic 15.0%
!!! ATTAGTTTTACAAGTTTATA+GGG - Chr1:5367872-5367891 MsG0180000391.01.T01:intron 15.0%
!!! CTTTAATAATTTAAGGTTTT+AGG + Chr1:5367173-5367192 None:intergenic 15.0%
!!! TACTTATTATTGTTGTTAAT+TGG + Chr1:5373577-5373596 None:intergenic 15.0%
!!! TTAATGATTTTTTTTTTGGA+AGG + Chr1:5372834-5372853 None:intergenic 15.0%
!!! TTTTATTCAACTATTATGAT+TGG - Chr1:5373154-5373173 MsG0180000391.01.T01:intron 15.0%
!!! TTTTTTTTTTGAAGAAAAAC+TGG + Chr1:5370115-5370134 None:intergenic 15.0%
!! AAAAAAGAAACTCTCAAATA+TGG - Chr1:5372497-5372516 MsG0180000391.01.T01:intron 20.0%
!! AAAAACAGAAAGAAAGAATA+TGG + Chr1:5371813-5371832 None:intergenic 20.0%
!! AAAATATAATCTTCCTAACA+TGG - Chr1:5372282-5372301 MsG0180000391.01.T01:intron 20.0%
!! AACAAAAGATTAACATCATT+TGG - Chr1:5373368-5373387 MsG0180000391.01.T01:intron 20.0%
!! AATACTAAAACATTGTCATT+TGG - Chr1:5368435-5368454 MsG0180000391.01.T01:intron 20.0%
!! ACTTAATTTATCATTTGATG+CGG + Chr1:5367088-5367107 None:intergenic 20.0%
!! ATATTAGTATTGTCAAATAG+CGG + Chr1:5366254-5366273 None:intergenic 20.0%
!! ATGCTTAAGCTATTAATATA+CGG - Chr1:5367006-5367025 MsG0180000391.01.T01:intron 20.0%
!! ATGTATGGAAAAATATTGTT+AGG - Chr1:5373442-5373461 MsG0180000391.01.T01:intron 20.0%
!! CCAAAAAAAAAATCATTAAG+AGG - Chr1:5372835-5372854 MsG0180000391.01.T01:intron 20.0%
!! CTAAAAGCTTAAATTGTTAA+AGG - Chr1:5367843-5367862 MsG0180000391.01.T01:intron 20.0%
!! CTAGCTTAAAATATCATTTA+GGG - Chr1:5368404-5368423 MsG0180000391.01.T01:intron 20.0%
!! TAAATATTTACGAAAAAAGG+GGG + Chr1:5371900-5371919 None:intergenic 20.0%
!! TATGCAAAGTTATATTGTAA+GGG - Chr1:5366671-5366690 MsG0180000391.01.T01:intron 20.0%
!! TATTAATAGCTTAAGCATAT+AGG + Chr1:5367004-5367023 None:intergenic 20.0%
!! TATTTACGTTTAGTCAAAAA+CGG - Chr1:5374538-5374557 MsG0180000391.01.T01:intron 20.0%
!! TTATGCAAAGTTATATTGTA+AGG - Chr1:5366670-5366689 MsG0180000391.01.T01:intron 20.0%
!! TTCATGCCTTTAATAATTTA+AGG + Chr1:5367180-5367199 None:intergenic 20.0%
!!! AAAACATTTAGGTTTATGTA+AGG - Chr1:5366430-5366449 MsG0180000391.01.T01:intron 20.0%
!!! AAACATTTAGGTTTATGTAA+GGG - Chr1:5366431-5366450 MsG0180000391.01.T01:intron 20.0%
!!! AAATTAAGTTGTGAAGAATA+AGG - Chr1:5367099-5367118 MsG0180000391.01.T01:intron 20.0%
!!! AAATTGCATAAAAGTTTGTT+TGG + Chr1:5372653-5372672 None:intergenic 20.0%
!!! AGAAATTTTATTATATGGCA+TGG - Chr1:5371372-5371391 MsG0180000391.01.T01:intron 20.0%
!!! AGGTTTTGATGAATTTTTTT+GGG - Chr1:5366056-5366075 MsG0180000391.01.T01:intron 20.0%
!!! CCTCTTAATGATTTTTTTTT+TGG + Chr1:5372838-5372857 None:intergenic 20.0%
!!! CGTTTGTAACATTTTTTTTA+TGG + Chr1:5373107-5373126 None:intergenic 20.0%
!!! CTTTAACAATTTAAGCTTTT+AGG + Chr1:5367845-5367864 None:intergenic 20.0%
!!! GTAATATGATTTTATTGATG+AGG + Chr1:5370071-5370090 None:intergenic 20.0%
!!! TAAATTATAAGCTTGAGTTT+TGG + Chr1:5373228-5373247 None:intergenic 20.0%
!!! TCTAGCTTAAAATATCATTT+AGG - Chr1:5368403-5368422 MsG0180000391.01.T01:intron 20.0%
!!! TGATAGTCGTTTATTTTTAT+AGG - Chr1:5370512-5370531 MsG0180000391.01.T01:intron 20.0%
!!! TTGATAATTAATTTCTTTCG+AGG + Chr1:5373752-5373771 None:intergenic 20.0%
! AAAATATACATACCTGACTA+GGG + Chr1:5365886-5365905 None:intergenic 25.0%
! AAACTTAAGCTATTAAGTGA+AGG - Chr1:5367477-5367496 MsG0180000391.01.T01:intron 25.0%
! AAAGGGTAATTCTTAATCTT+AGG + Chr1:5365689-5365708 None:intergenic 25.0%
! AACCAATTAAGCAATAATCA+AGG + Chr1:5374729-5374748 None:intergenic 25.0%
! AACGAGATATCAGAAATATT+AGG + Chr1:5367244-5367263 None:intergenic 25.0%
! AACTCGTTGTGATTAAATTA+CGG - Chr1:5366957-5366976 MsG0180000391.01.T01:intron 25.0%
! AAGGCATGAAATAGTTTAAA+GGG - Chr1:5367190-5367209 MsG0180000391.01.T01:intron 25.0%
! AATCACTTTAACAAGATATC+TGG + Chr1:5367926-5367945 None:intergenic 25.0%
! AATTGGCAAAATTGTACAAA+TGG + Chr1:5373560-5373579 None:intergenic 25.0%
! ACTTAATAGCTTAAGTTTAG+AGG + Chr1:5367475-5367494 None:intergenic 25.0%
! AGAAACAAAAAAGACAAACA+AGG - Chr1:5374081-5374100 MsG0180000391.01.T01:intron 25.0%
! AGATATCTGGATATATATTG+TGG + Chr1:5367913-5367932 None:intergenic 25.0%
! AGATTAACATCATTTGGTAT+AGG - Chr1:5373374-5373393 MsG0180000391.01.T01:intron 25.0%
! ATAGGAAGTAAATTTATCAC+TGG - Chr1:5374897-5374916 MsG0180000391.01.T01:intron 25.0%
! ATATTAACCTGTGAAGAATA+AGG - Chr1:5367569-5367588 MsG0180000391.01.T01:intron 25.0%
! ATTAGAATTCTAACAGAATC+TGG - Chr1:5367392-5367411 MsG0180000391.01.T01:intron 25.0%
! ATTTACATATGTGGAATCTT+AGG + Chr1:5368574-5368593 None:intergenic 25.0%
! ATTTCCCATTGAGATAAATA+TGG - Chr1:5368764-5368783 MsG0180000391.01.T01:intron 25.0%
! ATTTGTTTGAGAGTTTAGAA+GGG - Chr1:5372101-5372120 MsG0180000391.01.T01:intron 25.0%
! CAATTATCTGATAAAGATAC+TGG + Chr1:5370146-5370165 None:intergenic 25.0%
! CGTGTGCTAAAAATATAAAT+AGG - Chr1:5374879-5374898 MsG0180000391.01.T01:intron 25.0%
! CTCAAAAGTTATGAAAATTG+AGG + Chr1:5371448-5371467 None:intergenic 25.0%
! CTCTTATAAAAAACAGATGA+AGG + Chr1:5365857-5365876 None:intergenic 25.0%
! GATACTACCTAAATAGTTAA+GGG + Chr1:5371946-5371965 None:intergenic 25.0%
! GTAATCAAACATCTTAAACA+AGG - Chr1:5373601-5373620 MsG0180000391.01.T01:intron 25.0%
! TAAAGAAATTATTGAGCTTG+TGG - Chr1:5375041-5375060 MsG0180000391.01.T01:intron 25.0%
! TACCTTGATTATTGCTTAAT+TGG - Chr1:5374724-5374743 MsG0180000391.01.T01:intron 25.0%
! TACGCAGAAAATGATAAAAA+GGG + Chr1:5366646-5366665 None:intergenic 25.0%
! TAGAGTTTCTATTGTTATAC+AGG + Chr1:5371194-5371213 None:intergenic 25.0%
! TATGACTATATTCAAATCAC+CGG - Chr1:5373954-5373973 MsG0180000391.01.T01:intron 25.0%
! TCATCAATAACAATTAGTAC+TGG - Chr1:5374938-5374957 MsG0180000391.01.T01:intron 25.0%
! TCCATGTTAATAGCATAAAA+CGG - Chr1:5373911-5373930 MsG0180000391.01.T01:intron 25.0%
! TGCTTAGGTTTATGTTAATA+TGG - Chr1:5370602-5370621 MsG0180000391.01.T01:intron 25.0%
! TTAAGATTTGAACTTGAGAA+GGG + Chr1:5373680-5373699 None:intergenic 25.0%
! TTAATCTGTGTTATCAATCT+TGG + Chr1:5369742-5369761 None:intergenic 25.0%
! TTACGCAGAAAATGATAAAA+AGG + Chr1:5366647-5366666 None:intergenic 25.0%
! TTATAAAAAACAGATGAAGG+AGG + Chr1:5365854-5365873 None:intergenic 25.0%
! TTCTCCATATTTATCTCAAT+GGG + Chr1:5368771-5368790 None:intergenic 25.0%
! TTGAATATAGTCATACTTGT+AGG + Chr1:5373949-5373968 None:intergenic 25.0%
! TTGAATATTTATTGAGCATG+TGG - Chr1:5369784-5369803 MsG0180000391.01.T01:intron 25.0%
!! AAAAGGCTAAATTGCATTTT+TGG - Chr1:5371919-5371938 MsG0180000391.01.T01:intron 25.0%
!! AAAGGCATGAAATAGTTTAA+AGG - Chr1:5367189-5367208 MsG0180000391.01.T01:intron 25.0%
!! AAATAAGCTTCATTCAAGTT+TGG + Chr1:5372197-5372216 None:intergenic 25.0%
!! ATTAGAGTTCTAACAGAATT+TGG - Chr1:5368269-5368288 MsG0180000391.01.T01:intron 25.0%
!! ATTTTTGAATTCTCCATGTT+AGG + Chr1:5372298-5372317 None:intergenic 25.0%
!! TCTAGCTTACAATATCATTT+CGG - Chr1:5369063-5369082 MsG0180000391.01.T01:intron 25.0%
!! TCTCCATATTTTATCTCAAT+GGG + Chr1:5368110-5368129 None:intergenic 25.0%
!! TGAGAATATAACATGCTTTT+GGG - Chr1:5366530-5366549 MsG0180000391.01.T01:intron 25.0%
!! TTCTCCATATTTTATCTCAA+TGG + Chr1:5368111-5368130 None:intergenic 25.0%
!!! AGGTTCTCAACTATTTTAAT+AGG + Chr1:5369410-5369429 None:intergenic 25.0%
!!! ATTGACTTTTGTGAAATGTT+AGG + Chr1:5367286-5367305 None:intergenic 25.0%
!!! ATTTACTTTTACTGCATGTT+CGG - Chr1:5366884-5366903 MsG0180000391.01.T01:intron 25.0%
!!! ATTTGAGAGTTTCTTTTTTG+AGG + Chr1:5372496-5372515 None:intergenic 25.0%
!!! CTTTTTCAATAAAAGGAAAG+AGG - Chr1:5374180-5374199 MsG0180000391.01.T01:intron 25.0%
!!! GACAAATTTTGAGAAAATGA+TGG - Chr1:5372123-5372142 MsG0180000391.01.T01:intron 25.0%
!!! GAGGTTTTGATGAATTTTTT+TGG - Chr1:5366055-5366074 MsG0180000391.01.T01:intron 25.0%
!!! TACCTTTTTGTGTTAGTTTT+AGG - Chr1:5375147-5375166 MsG0180000391.01.T01:CDS 25.0%
!!! TATAAAGTAAAAGTCGGTTT+TGG - Chr1:5372578-5372597 MsG0180000391.01.T01:intron 25.0%
!!! TATATATTTTTAGGCTCCAT+TGG + Chr1:5372562-5372581 None:intergenic 25.0%
!!! TCTCAGACTTTTTTTTTTTG+AGG - Chr1:5372046-5372065 MsG0180000391.01.T01:intron 25.0%
!!! TGAGAGTATTTTTATTGACA+AGG + Chr1:5372424-5372443 None:intergenic 25.0%
!!! TGCTTTTGGAAAATTCTTTA+TGG - Chr1:5371747-5371766 MsG0180000391.01.T01:intron 25.0%
!!! TTTATATTTTTAGCACACGT+AGG + Chr1:5374878-5374897 None:intergenic 25.0%
!!! TTTGAGAGTTTCTTTTTTGA+GGG + Chr1:5372495-5372514 None:intergenic 25.0%
!!! TTTTTTTGGGTTATAGATTG+TGG - Chr1:5366069-5366088 MsG0180000391.01.T01:intron 25.0%
AAACATAGTGATGTTGAGTA+AGG - Chr1:5373278-5373297 MsG0180000391.01.T01:intron 30.0%
AAATATTAGGCTATGAACAG+AGG + Chr1:5367231-5367250 None:intergenic 30.0%
AAATGATATGCACAGATAGT+AGG + Chr1:5373202-5373221 None:intergenic 30.0%
AAATTATTGAGCTTGTGGAA+GGG - Chr1:5375046-5375065 MsG0180000391.01.T01:intron 30.0%
AACATAGTGATGTTGAGTAA+GGG - Chr1:5373279-5373298 MsG0180000391.01.T01:intron 30.0%
AACTAAGGAAAGACTTATGA+GGG - Chr1:5366401-5366420 MsG0180000391.01.T01:intron 30.0%
AAGTAATTGTTGCCTATTCA+TGG - Chr1:5366772-5366791 MsG0180000391.01.T01:intron 30.0%
AAGTTCCACTAAACTAATAG+CGG - Chr1:5366313-5366332 MsG0180000391.01.T01:intron 30.0%
AATTTATCATTTGATGCGGT+GGG + Chr1:5367084-5367103 None:intergenic 30.0%
ACCAATTGTTGACATAGTTA+AGG - Chr1:5367336-5367355 MsG0180000391.01.T01:intron 30.0%
ACCTTAACTATGTCAACAAT+TGG + Chr1:5367340-5367359 None:intergenic 30.0%
ACTCGTTGTGATTAAATTAC+GGG - Chr1:5366958-5366977 MsG0180000391.01.T01:intron 30.0%
AGGAAAAAATAAGATCACTC+AGG - Chr1:5366714-5366733 MsG0180000391.01.T01:intron 30.0%
AGGAACATAAAAGCAATCTT+AGG + Chr1:5365722-5365741 None:intergenic 30.0%
ATCCAAGTCAAAAGTTTCAA+CGG - Chr1:5374685-5374704 MsG0180000391.01.T01:intron 30.0%
ATCTTAGGAACTCTTTCAAA+AGG + Chr1:5365707-5365726 None:intergenic 30.0%
ATTAGCAAGTAGTCTTCTTT+CGG + Chr1:5370701-5370720 None:intergenic 30.0%
ATTTACACATGTGGAATCTT+AGG + Chr1:5367959-5367978 None:intergenic 30.0%
CAAAATATACATACCTGACT+AGG + Chr1:5365887-5365906 None:intergenic 30.0%
CAACGAGTTTGATGAAATAA+AGG + Chr1:5366946-5366965 None:intergenic 30.0%
CCTCAAAACAATCATAAACA+AGG + Chr1:5366039-5366058 None:intergenic 30.0%
CGATACTACCTAAATAGTTA+AGG + Chr1:5371947-5371966 None:intergenic 30.0%
CGATGAGTTAAATTTCTCAA+GGG - Chr1:5366478-5366497 MsG0180000391.01.T01:intron 30.0%
CTAGCTTACAATATCATTTC+GGG - Chr1:5369064-5369083 MsG0180000391.01.T01:intron 30.0%
CTTAAGATTTGAACTTGAGA+AGG + Chr1:5373681-5373700 None:intergenic 30.0%
CTTCTCAAGTTCAAATCTTA+AGG - Chr1:5373679-5373698 MsG0180000391.01.T01:intron 30.0%
GAATGTACAAATGAGCTTAT+TGG - Chr1:5371476-5371495 MsG0180000391.01.T01:intron 30.0%
GAATTCACCATATCTAACAA+AGG + Chr1:5371264-5371283 None:intergenic 30.0%
GAGTTTCCAATATTGTGTAT+GGG - Chr1:5367811-5367830 MsG0180000391.01.T01:intron 30.0%
GATGTAGGGAGAAAAAAATT+AGG - Chr1:5368309-5368328 MsG0180000391.01.T01:intron 30.0%
GCTTAAGTTTAGAGGAAATT+TGG + Chr1:5367467-5367486 None:intergenic 30.0%
GGAAAAAATAAGATCACTCA+GGG - Chr1:5366715-5366734 MsG0180000391.01.T01:intron 30.0%
GGAGAATTCAAAAATCGTAT+TGG - Chr1:5372303-5372322 MsG0180000391.01.T01:intron 30.0%
GGTTAATGTTTAATGCACTA+TGG + Chr1:5369318-5369337 None:intergenic 30.0%
GTTCTCCATATTTATCTCAA+TGG + Chr1:5368772-5368791 None:intergenic 30.0%
TAAAGTTAGTTAGTGCTTGT+AGG - Chr1:5367363-5367382 MsG0180000391.01.T01:intron 30.0%
TAATTTATCATTTGATGCGG+TGG + Chr1:5367085-5367104 None:intergenic 30.0%
TAGAACTACATAAGGAACTA+AGG - Chr1:5366386-5366405 MsG0180000391.01.T01:intron 30.0%
TAGTACTAGTTAGAGTTAGT+TGG - Chr1:5368230-5368249 MsG0180000391.01.T01:intron 30.0%
TATTAAGTGAAGGACATGAT+TGG - Chr1:5367487-5367506 MsG0180000391.01.T01:intron 30.0%
TCAAGTACAATGTTGTCAAA+TGG + Chr1:5366349-5366368 None:intergenic 30.0%
TCGATGAGTTAAATTTCTCA+AGG - Chr1:5366477-5366496 MsG0180000391.01.T01:intron 30.0%
TCTCCCATTGAGATAAAATA+TGG - Chr1:5368104-5368123 MsG0180000391.01.T01:intron 30.0%
TCTTAGGAACTCTTTCAAAA+GGG + Chr1:5365706-5365725 None:intergenic 30.0%
TGAGTGATAAAGAACTTCTT+TGG - Chr1:5365648-5365667 MsG0180000391.01.T01:CDS 30.0%
TTAACTAAGTCAGCAATTGA+GGG + Chr1:5368874-5368893 None:intergenic 30.0%
TTAAGGTGAATATCATGAAG+AGG - Chr1:5372805-5372824 MsG0180000391.01.T01:intron 30.0%
TTACTTTCTGATTTCTGTTC+TGG - Chr1:5366120-5366139 MsG0180000391.01.T01:intron 30.0%
TTATTTACCCCATCATTTCA+AGG - Chr1:5369188-5369207 MsG0180000391.01.T01:intron 30.0%
TTGGAAAACAGATATTACGA+AGG - Chr1:5371134-5371153 MsG0180000391.01.T01:intron 30.0%
TTTATAGCATCTTCATTGCA+CGG + Chr1:5372024-5372043 None:intergenic 30.0%
! AGGATTTGTCTATCTTTTGA+TGG + Chr1:5373732-5373751 None:intergenic 30.0%
! CATTAAAACGTTGTCATTTC+AGG + Chr1:5369256-5369275 None:intergenic 30.0%
! GAGGGTATACAAAAACATTT+AGG - Chr1:5366419-5366438 MsG0180000391.01.T01:intron 30.0%
! GATTTGTTTGAGAGTTTAGA+AGG - Chr1:5372100-5372119 MsG0180000391.01.T01:intron 30.0%
! GCAATAATCAAGGTACTATA+TGG + Chr1:5374719-5374738 None:intergenic 30.0%
! GCTTTTATGTTCCTTACTAA+AGG - Chr1:5365728-5365747 MsG0180000391.01.T01:CDS 30.0%
! GTGAGAATATAACATGCTTT+TGG - Chr1:5366529-5366548 MsG0180000391.01.T01:intron 30.0%
! TAAAACATTGTCATTTGGTG+AGG - Chr1:5368440-5368459 MsG0180000391.01.T01:intron 30.0%
! TTAAGTTGTGAAGAATAAGG+TGG - Chr1:5367102-5367121 MsG0180000391.01.T01:intron 30.0%
! TTTTATTATATGGCATGGCA+TGG - Chr1:5371377-5371396 MsG0180000391.01.T01:intron 30.0%
! TTTTGGTCCCTTAACTATTT+AGG - Chr1:5371936-5371955 MsG0180000391.01.T01:intron 30.0%
!! ATTTTGTAACGTTGACTAGA+GGG + Chr1:5370894-5370913 None:intergenic 30.0%
!! CCTTGTTTATGATTGTTTTG+AGG - Chr1:5366036-5366055 MsG0180000391.01.T01:intron 30.0%
!! TTCTCGAGTCATTGTTATTT+CGG - Chr1:5370280-5370299 MsG0180000391.01.T01:CDS 30.0%
!!! CTTTTTGTGTTAGTTTTAGG+CGG - Chr1:5375150-5375169 MsG0180000391.01.T01:CDS 30.0%
!!! TTGAGAGTTTCTTTTTTGAG+GGG + Chr1:5372494-5372513 None:intergenic 30.0%
!!! TTGTCTTTTTTGTTTCTCTC+AGG + Chr1:5374078-5374097 None:intergenic 30.0%
!!! TTGTTTTCAGGTTAATGTTG+AGG - Chr1:5375320-5375339 MsG0180000391.01.T01:CDS 30.0%
!!! TTTATTTTAGAACTAGGAGC+TGG + Chr1:5374438-5374457 None:intergenic 30.0%
AAAACTGTAGGGAGAAGATT+AGG - Chr1:5367429-5367448 MsG0180000391.01.T01:intron 35.0%
AAAGAGGAAAACGAGTTAGA+GGG - Chr1:5374196-5374215 MsG0180000391.01.T01:intron 35.0%
AAATCCAAATTCAGCTTCGT+CGG - Chr1:5370814-5370833 MsG0180000391.01.T01:intron 35.0%
AAATTCAGATCACTTGGTCA+AGG - Chr1:5367789-5367808 MsG0180000391.01.T01:intron 35.0%
AACAAGTTTGCAAGTAGACT+CGG - Chr1:5368470-5368489 MsG0180000391.01.T01:intron 35.0%
AACCATGTTAACCATTCAAG+CGG - Chr1:5371042-5371061 MsG0180000391.01.T01:intron 35.0%
AACGTTACAAAATGGCGTAA+AGG - Chr1:5370901-5370920 MsG0180000391.01.T01:intron 35.0%
AATTCTAACAGAATCTGGCA+CGG - Chr1:5367397-5367416 MsG0180000391.01.T01:intron 35.0%
ACACCATATCTTCACCATAT+GGG + Chr1:5370395-5370414 None:intergenic 35.0%
ACAGATAACAGACCATGAAT+AGG + Chr1:5366787-5366806 None:intergenic 35.0%
ACCTTAACTAAGTCAGCAAT+TGG + Chr1:5368211-5368230 None:intergenic 35.0%
ACGTATAATTAGGTCGTATG+TGG + Chr1:5366592-5366611 None:intergenic 35.0%
ACTAGACTGAATTTGTAGAG+AGG + Chr1:5370778-5370797 None:intergenic 35.0%
AGGTTAATATCAGCATGCAA+TGG + Chr1:5367559-5367578 None:intergenic 35.0%
AGTACAATGTTGTCAAATGG+TGG + Chr1:5366346-5366365 None:intergenic 35.0%
AGTAGACTCAGATCATTTCA+AGG - Chr1:5369142-5369161 MsG0180000391.01.T01:intron 35.0%
ATAAGATCACTCAGGGATTA+AGG - Chr1:5366722-5366741 MsG0180000391.01.T01:intron 35.0%
ATAAGTGTGCAGAAACATGT+TGG - Chr1:5366562-5366581 MsG0180000391.01.T01:intron 35.0%
ATGACGCCAAAATCATTGAT+TGG - Chr1:5374006-5374025 MsG0180000391.01.T01:intron 35.0%
ATTACTTCCATGTCTCTTCT+TGG + Chr1:5366759-5366778 None:intergenic 35.0%
ATTGTACTTGATCAGTTCAC+CGG - Chr1:5366358-5366377 MsG0180000391.01.T01:intron 35.0%
CAATAGAATAAACCGCTCAT+TGG + Chr1:5370740-5370759 None:intergenic 35.0%
CATATCTAACAAAGGTTCCA+AGG + Chr1:5371256-5371275 None:intergenic 35.0%
CATGATACAAGTTTGAGAGA+AGG - Chr1:5366694-5366713 MsG0180000391.01.T01:intron 35.0%
CCAACTAGGTACGTATAATT+AGG + Chr1:5366602-5366621 None:intergenic 35.0%
CCACATATGTAAATGAGACA+GGG - Chr1:5368580-5368599 MsG0180000391.01.T01:intron 35.0%
CCTAATTATACGTACCTAGT+TGG - Chr1:5366599-5366618 MsG0180000391.01.T01:intron 35.0%
CCTTAACTAAGTCAGCAATT+GGG + Chr1:5368210-5368229 None:intergenic 35.0%
CGAGTTTGATGAAATAAAGG+CGG + Chr1:5366943-5366962 None:intergenic 35.0%
CGATAAGTGATTGACAACAT+TGG - Chr1:5367763-5367782 MsG0180000391.01.T01:intron 35.0%
CGCCTAAAACTAACACAAAA+AGG + Chr1:5375152-5375171 None:intergenic 35.0%
CTACAGTATTGTTCGAACTT+AGG + Chr1:5370989-5371008 None:intergenic 35.0%
CTAGACTGAATTTGTAGAGA+GGG + Chr1:5370777-5370796 None:intergenic 35.0%
CTATTTAGGTAGTATCGCTT+TGG - Chr1:5371950-5371969 MsG0180000391.01.T01:intron 35.0%
CTCGTTGTGATTAAATTACG+GGG - Chr1:5366959-5366978 MsG0180000391.01.T01:intron 35.0%
CTCTAGTCAACGTTACAAAA+TGG - Chr1:5370893-5370912 MsG0180000391.01.T01:intron 35.0%
CTGTGTATCATCACACTTTA+TGG + Chr1:5367529-5367548 None:intergenic 35.0%
CTTAAAAGCCTACATCAAAC+AGG - Chr1:5368179-5368198 MsG0180000391.01.T01:intron 35.0%
CTTAAAAGTCTACAGCAAAC+AGG - Chr1:5367308-5367327 MsG0180000391.01.T01:intron 35.0%
CTTAACTAAGTCAGCAATTG+AGG + Chr1:5368209-5368228 None:intergenic 35.0%
CTTAACTAAGTCAGCAATTG+GGG + Chr1:5368209-5368228 None:intergenic 35.0%
CTTGGAACCTTTGTTAGATA+TGG - Chr1:5371254-5371273 MsG0180000391.01.T01:intron 35.0%
GAAATTATTGAGCTTGTGGA+AGG - Chr1:5375045-5375064 MsG0180000391.01.T01:intron 35.0%
GAACTAAGGAAAGACTTATG+AGG - Chr1:5366400-5366419 MsG0180000391.01.T01:intron 35.0%
GACATTGACAGAAATAACGT+GGG - Chr1:5374394-5374413 MsG0180000391.01.T01:intron 35.0%
GATATGAATAGCATTTGGGT+AGG - Chr1:5370221-5370240 MsG0180000391.01.T01:CDS 35.0%
GATGAAGGAGAAGAAAACTA+GGG - Chr1:5374263-5374282 MsG0180000391.01.T01:intron 35.0%
GCTATTAATATACGGACACA+TGG - Chr1:5367014-5367033 MsG0180000391.01.T01:intron 35.0%
GCTTAAGCATATAGGAAAGT+TGG + Chr1:5366996-5367015 None:intergenic 35.0%
GGAGTTTCCAATATTGTGTA+TGG - Chr1:5367810-5367829 MsG0180000391.01.T01:intron 35.0%
GGCTGATATGCACTTTATTA+TGG - Chr1:5366090-5366109 MsG0180000391.01.T01:intron 35.0%
GTCTGTTATCTGTTTGTAGA+GGG - Chr1:5366794-5366813 MsG0180000391.01.T01:intron 35.0%
GTTCGAACTTAGGATAAATG+CGG + Chr1:5370979-5370998 None:intergenic 35.0%
GTTTGACGATAATCTATGGA+TGG - Chr1:5375092-5375111 MsG0180000391.01.T01:intron 35.0%
TAACCTGTGAAGAATAAGGA+TGG - Chr1:5367573-5367592 MsG0180000391.01.T01:intron 35.0%
TCATAACCATATGAGTCTCT+AGG - Chr1:5369024-5369043 MsG0180000391.01.T01:intron 35.0%
TCATCACTTGTTCAAGCTAA+GGG - Chr1:5370042-5370061 MsG0180000391.01.T01:intron 35.0%
TCCACATATGTAAATGAGAC+AGG - Chr1:5368579-5368598 MsG0180000391.01.T01:intron 35.0%
TCTGTGTTATCAATCTTGGA+TGG + Chr1:5369738-5369757 None:intergenic 35.0%
TCTTATACACAAACTCGAGT+TGG - Chr1:5373640-5373659 MsG0180000391.01.T01:intron 35.0%
TGAATTTGCAACAACCAACT+AGG + Chr1:5366616-5366635 None:intergenic 35.0%
TGACATTGACAGAAATAACG+TGG - Chr1:5374393-5374412 MsG0180000391.01.T01:intron 35.0%
TGCAAATCGTGTCTTAGTAA+GGG - Chr1:5369369-5369388 MsG0180000391.01.T01:intron 35.0%
TGCATTAAACATTAACCTCG+CGG - Chr1:5369321-5369340 MsG0180000391.01.T01:intron 35.0%
TGCGGATATGAATAGCATTT+GGG - Chr1:5370217-5370236 MsG0180000391.01.T01:CDS 35.0%
TGGTAGAAATTCAGATCACT+TGG - Chr1:5367783-5367802 MsG0180000391.01.T01:intron 35.0%
TTAACTAAGTCAGCAATTGG+GGG + Chr1:5368208-5368227 None:intergenic 35.0%
TTAAGAATCGGTAAAGACTG+CGG - Chr1:5370199-5370218 MsG0180000391.01.T01:CDS 35.0%
TTAATATACGGACACATGGT+TGG - Chr1:5367018-5367037 MsG0180000391.01.T01:intron 35.0%
TTCATCACTTGTTCAAGCTA+AGG - Chr1:5370041-5370060 MsG0180000391.01.T01:intron 35.0%
TTGATACCTAGAGACTCATA+TGG + Chr1:5369033-5369052 None:intergenic 35.0%
TTGTGAAGAATAAGGTGGAA+AGG - Chr1:5367107-5367126 MsG0180000391.01.T01:intron 35.0%
TTGTGGAAGGGATAGATTTA+GGG - Chr1:5375058-5375077 MsG0180000391.01.T01:intron 35.0%
! ATCTGTTTTCCAAATGTAGC+TGG + Chr1:5371127-5371146 None:intergenic 35.0%
! CTATACCGCTATTAGTTTAG+TGG + Chr1:5366321-5366340 None:intergenic 35.0%
! CTCAATAGAGACTTTGCTTT+TGG - Chr1:5371733-5371752 MsG0180000391.01.T01:intron 35.0%
! CTCATGCTCTTGTCTTATTA+AGG + Chr1:5371666-5371685 None:intergenic 35.0%
! GCAGATCCAATCAATGATTT+TGG + Chr1:5374015-5374034 None:intergenic 35.0%
! GCTCTTTTTGCGTTAAGAAT+CGG - Chr1:5370187-5370206 MsG0180000391.01.T01:CDS 35.0%
! TGTCATTTGGTGAGGAAAAT+TGG - Chr1:5369108-5369127 MsG0180000391.01.T01:intron 35.0%
! TTGAAATCCTTAAAGTGTCC+CGG + Chr1:5368008-5368027 None:intergenic 35.0%
! TTTCAAGTGGACTCTTATGA+TGG - Chr1:5368497-5368516 MsG0180000391.01.T01:intron 35.0%
! TTTGGTATAGGCTTTTAGTC+TGG - Chr1:5373386-5373405 MsG0180000391.01.T01:intron 35.0%
! TTTTACTGCATGTTCGGATT+TGG - Chr1:5366890-5366909 MsG0180000391.01.T01:intron 35.0%
! TTTTCCAAATGTAGCTGGAT+GGG + Chr1:5371122-5371141 None:intergenic 35.0%
! TTTTGGATTTCATGGGAAGA+TGG - Chr1:5366853-5366872 MsG0180000391.01.T01:intron 35.0%
!! ACGCAAAAAGAGCATCTTTA+TGG + Chr1:5370180-5370199 None:intergenic 35.0%
!! CATTTTGTAACGTTGACTAG+AGG + Chr1:5370895-5370914 None:intergenic 35.0%
!! CTCAATTGCTGACTTAGTTA+AGG - Chr1:5368873-5368892 MsG0180000391.01.T01:intron 35.0%
!! GAAAACTAGGGTTTTAGTGA+CGG - Chr1:5374275-5374294 MsG0180000391.01.T01:intron 35.0%
!! GACTAAAGTGTTGATTGTTG+TGG - Chr1:5375188-5375207 MsG0180000391.01.T01:CDS 35.0%
!! GATATAGGGTGGATTTTGAT+CGG - Chr1:5373418-5373437 MsG0180000391.01.T01:intron 35.0%
!! GCCGTTTTATGCTATTAACA+TGG + Chr1:5373915-5373934 None:intergenic 35.0%
!! GTTGGTTTGACGATAATCTA+TGG - Chr1:5375088-5375107 MsG0180000391.01.T01:intron 35.0%
!! TAGAGTTAGTTTGTGCTTGT+AGG - Chr1:5368900-5368919 MsG0180000391.01.T01:intron 35.0%
!! TCTCGAGTCATTGTTATTTC+GGG - Chr1:5370281-5370300 MsG0180000391.01.T01:CDS 35.0%
!! TGGATTTTGATCGGTATGTA+TGG - Chr1:5373427-5373446 MsG0180000391.01.T01:intron 35.0%
!! TGTGTTTGTTGAGTTGAGAT+TGG - Chr1:5369947-5369966 MsG0180000391.01.T01:intron 35.0%
!! TTGCTTAATTGGTTAGTCTG+TGG - Chr1:5374735-5374754 MsG0180000391.01.T01:intron 35.0%
!! TTTGACTTTTGACAACCTTG+CGG + Chr1:5368335-5368354 None:intergenic 35.0%
!! TTTTGTAACGTTGACTAGAG+GGG + Chr1:5370893-5370912 None:intergenic 35.0%
!!! AAACTTTTGACTTGGATGTG+GGG + Chr1:5374682-5374701 None:intergenic 35.0%
!!! CTCTTTTTTTTACCTCATCG+TGG - Chr1:5369512-5369531 MsG0180000391.01.T01:intron 35.0%
!!! GAAACTTTTGACTTGGATGT+GGG + Chr1:5374683-5374702 None:intergenic 35.0%
!!! GAGATTGGTTTTGGTTCTTT+AGG - Chr1:5369962-5369981 MsG0180000391.01.T01:intron 35.0%
!!! GAGTTTTTTGATAGAGTTCG+TGG - Chr1:5371156-5371175 MsG0180000391.01.T01:intron 35.0%
!!! GCACGTTTTTTGGATTTCAT+GGG - Chr1:5366846-5366865 MsG0180000391.01.T01:intron 35.0%
!!! TGAAACTTTTGACTTGGATG+TGG + Chr1:5374684-5374703 None:intergenic 35.0%
!!! TGAGAGTTTCTTTTTTGAGG+GGG + Chr1:5372493-5372512 None:intergenic 35.0%
!!! TGCACGTTTTTTGGATTTCA+TGG - Chr1:5366845-5366864 MsG0180000391.01.T01:intron 35.0%
!!! TGGTTCACAATGTTGTTTTC+AGG - Chr1:5375308-5375327 MsG0180000391.01.T01:CDS 35.0%
!!! TGTCTTAGTAAGGGCATTTT+AGG - Chr1:5369378-5369397 MsG0180000391.01.T01:intron 35.0%
!!! TGTTGAGTTGAGATTGGTTT+TGG - Chr1:5369953-5369972 MsG0180000391.01.T01:intron 35.0%
!!! TTGGTTTTGGTTCTTTAGGA+TGG - Chr1:5369966-5369985 MsG0180000391.01.T01:intron 35.0%
!!! TTTTTTGATAGAGTTCGTGG+AGG - Chr1:5371159-5371178 MsG0180000391.01.T01:intron 35.0%
AAATATGGAGAACTCCCTGT+CGG - Chr1:5368119-5368138 MsG0180000391.01.T01:intron 40.0%
AACAGATGAAGGAGGAAACT+TGG + Chr1:5365846-5365865 None:intergenic 40.0%
AACGTGCAGATCATCCATTT+AGG + Chr1:5366833-5366852 None:intergenic 40.0%
AAGAGGAAAACGAGTTAGAG+GGG - Chr1:5374197-5374216 MsG0180000391.01.T01:intron 40.0%
ACAAGTGATGAACCTAGGTT+AGG + Chr1:5370033-5370052 None:intergenic 40.0%
ACACAGGCTACAAAGATGTA+GGG - Chr1:5368295-5368314 MsG0180000391.01.T01:intron 40.0%
ACCATGTTAACCATTCAAGC+GGG - Chr1:5371043-5371062 MsG0180000391.01.T01:intron 40.0%
ACCTTCTGAGTTGTGGTTAA+TGG + Chr1:5374608-5374627 None:intergenic 40.0%
ACGAGTCTCCTTGAAATGAT+GGG + Chr1:5369153-5369172 None:intergenic 40.0%
ACTCGTCATGTAACAATGAC+GGG + Chr1:5366163-5366182 None:intergenic 40.0%
AGAGCAACCAAAAAGTGGTT+TGG + Chr1:5370418-5370437 None:intergenic 40.0%
ATATCCCTCTCTACTCTACT+GGG + Chr1:5374814-5374833 None:intergenic 40.0%
CACTCGTCATGTAACAATGA+CGG + Chr1:5366164-5366183 None:intergenic 40.0%
CATCACACTTTATGGCCAAA+TGG + Chr1:5367521-5367540 None:intergenic 40.0%
CCACATGTGTAAATGAGACA+TGG - Chr1:5367965-5367984 MsG0180000391.01.T01:intron 40.0%
CCATGTCTCATTTACACATG+TGG + Chr1:5367968-5367987 None:intergenic 40.0%
CCCTGTCTCATTTACATATG+TGG + Chr1:5368583-5368602 None:intergenic 40.0%
CTATGATTCTACCTAACTCG+CGG + Chr1:5366916-5366935 None:intergenic 40.0%
CTGCAAATCGTGTCTTAGTA+AGG - Chr1:5369368-5369387 MsG0180000391.01.T01:intron 40.0%
CTGCGGATATGAATAGCATT+TGG - Chr1:5370216-5370235 MsG0180000391.01.T01:CDS 40.0%
CTGGAAACGGGAAATATCTA+AGG - Chr1:5374629-5374648 MsG0180000391.01.T01:intron 40.0%
CTGTTATTAACTCCATTCCG+TGG - Chr1:5374655-5374674 MsG0180000391.01.T01:intron 40.0%
CTTGAACAAGTGATGAACCT+AGG + Chr1:5370038-5370057 None:intergenic 40.0%
CTTGTGGAAGGGATAGATTT+AGG - Chr1:5375057-5375076 MsG0180000391.01.T01:intron 40.0%
GAAAGAGGAAAACGAGTTAG+AGG - Chr1:5374195-5374214 MsG0180000391.01.T01:intron 40.0%
GACACCATATCTTCACCATA+TGG + Chr1:5370396-5370415 None:intergenic 40.0%
GACTAAGAGCAACCAAAAAG+TGG + Chr1:5370423-5370442 None:intergenic 40.0%
GAGAAAAAAATTAGGCCGCA+AGG - Chr1:5368317-5368336 MsG0180000391.01.T01:intron 40.0%
GCTAGTCCCATACACAATAT+TGG + Chr1:5367820-5367839 None:intergenic 40.0%
GCTTGAATGGTTAACATGGT+TGG + Chr1:5371043-5371062 None:intergenic 40.0%
GGACAAGCTACAAAACTGTA+GGG - Chr1:5367418-5367437 MsG0180000391.01.T01:intron 40.0%
GGATGAAGGAGAAGAAAACT+AGG - Chr1:5374262-5374281 MsG0180000391.01.T01:intron 40.0%
GGTCTGTTATCTGTTTGTAG+AGG - Chr1:5366793-5366812 MsG0180000391.01.T01:intron 40.0%
GTAGAGAGGGATACATGATT+CGG + Chr1:5370764-5370783 None:intergenic 40.0%
GTGTTATCAATCTTGGATGG+TGG + Chr1:5369735-5369754 None:intergenic 40.0%
GTTATCTGTTTGTAGAGGGT+GGG - Chr1:5366798-5366817 MsG0180000391.01.T01:intron 40.0%
GTTCGAACAATACTGTAGAC+CGG - Chr1:5370991-5371010 MsG0180000391.01.T01:intron 40.0%
TAACAGAATTTGGCAGACAC+AGG - Chr1:5368279-5368298 MsG0180000391.01.T01:intron 40.0%
TAAGAGACAAATCCCTAGTC+AGG - Chr1:5365871-5365890 MsG0180000391.01.T01:CDS 40.0%
TACAGTTAATCCTTGCTGAG+AGG + Chr1:5369560-5369579 None:intergenic 40.0%
TACGAGTCTCCTTGAAATGA+TGG + Chr1:5369154-5369173 None:intergenic 40.0%
TACTTGACATCTCCAATGAG+CGG - Chr1:5370725-5370744 MsG0180000391.01.T01:intron 40.0%
TAGACTCGGATCATTTCAAG+TGG - Chr1:5368484-5368503 MsG0180000391.01.T01:intron 40.0%
TAGATTTAGGGGTTGAGAGT+TGG - Chr1:5375070-5375089 MsG0180000391.01.T01:intron 40.0%
TCCACATCTTCATCCAATGT+CGG + Chr1:5370345-5370364 None:intergenic 40.0%
TCCATTAACCACAACTCAGA+AGG - Chr1:5374604-5374623 MsG0180000391.01.T01:intron 40.0%
TCTTAAACAAGGACTCGAGT+TGG - Chr1:5373612-5373631 MsG0180000391.01.T01:intron 40.0%
TCTTGTTCAGATTGCTGAGT+GGG - Chr1:5370654-5370673 MsG0180000391.01.T01:intron 40.0%
TGTCCATCCTTATTCTTCAC+AGG + Chr1:5367579-5367598 None:intergenic 40.0%
TGTGAAGAATAAGGATGGAC+AGG - Chr1:5367578-5367597 MsG0180000391.01.T01:intron 40.0%
TGTGGAAGGGATAGATTTAG+GGG - Chr1:5375059-5375078 MsG0180000391.01.T01:intron 40.0%
TGTTATCTGTTTGTAGAGGG+TGG - Chr1:5366797-5366816 MsG0180000391.01.T01:intron 40.0%
TTAAATTACGGGGCTTGTCA+AGG - Chr1:5366969-5366988 MsG0180000391.01.T01:intron 40.0%
TTATCTGTTTGTAGAGGGTG+GGG - Chr1:5366799-5366818 MsG0180000391.01.T01:intron 40.0%
TTCTTGTTCAGATTGCTGAG+TGG - Chr1:5370653-5370672 MsG0180000391.01.T01:intron 40.0%
TTGAGCAAAATCACACGCAT+TGG - Chr1:5374992-5375011 MsG0180000391.01.T01:intron 40.0%
TTGATACCTAGAGTCTCATC+TGG + Chr1:5368373-5368392 None:intergenic 40.0%
TTGGTTAACGCAACCTTGTT+GGG - Chr1:5372597-5372616 MsG0180000391.01.T01:intron 40.0%
TTGTACTTGATCAGTTCACC+GGG - Chr1:5366359-5366378 MsG0180000391.01.T01:intron 40.0%
TTTCAAGGAGACTCGTATGA+TGG - Chr1:5369157-5369176 MsG0180000391.01.T01:intron 40.0%
TTTGGGTAGGATAACATAGC+TGG - Chr1:5370234-5370253 MsG0180000391.01.T01:CDS 40.0%
TTTGGTTAACGCAACCTTGT+TGG - Chr1:5372596-5372615 MsG0180000391.01.T01:intron 40.0%
! AAAATGCCAAGGAGGTATAG+TGG + Chr1:5369694-5369713 None:intergenic 40.0%
! AAAATTTGCTCCTAGTGCCT+TGG - Chr1:5371236-5371255 MsG0180000391.01.T01:intron 40.0%
! AAATGCCAAGGAGGTATAGT+GGG + Chr1:5369693-5369712 None:intergenic 40.0%
! ACTATACCTCCTTGGCATTT+TGG - Chr1:5369693-5369712 MsG0180000391.01.T01:intron 40.0%
! ACTTCTTTGGAGAGCTTCTT+TGG - Chr1:5365661-5365680 MsG0180000391.01.T01:CDS 40.0%
! ATCATTGATTGGATCTGCAC+TGG - Chr1:5374017-5374036 MsG0180000391.01.T01:intron 40.0%
! CACGGCTTTTCGAAAGTTAA+GGG + Chr1:5372006-5372025 None:intergenic 40.0%
! CTATACCTCCTTGGCATTTT+GGG - Chr1:5369694-5369713 MsG0180000391.01.T01:intron 40.0%
! CTCAGTATCATCGCATTTTG+TGG + Chr1:5367060-5367079 None:intergenic 40.0%
! GGAAACTTGGCTTGATAAGA+AGG + Chr1:5365833-5365852 None:intergenic 40.0%
! GTTTTCCAAATGTAGCTGGA+TGG + Chr1:5371123-5371142 None:intergenic 40.0%
! TATACCTCCTTGGCATTTTG+GGG - Chr1:5369695-5369714 MsG0180000391.01.T01:intron 40.0%
! TGAAATCCTTAAAGTGTCCC+GGG + Chr1:5368007-5368026 None:intergenic 40.0%
! TGTCATTTCAGGCATCTCAA+GGG + Chr1:5369245-5369264 None:intergenic 40.0%
! TTGGCTTGATAAGAAGGAGT+TGG + Chr1:5365827-5365846 None:intergenic 40.0%
! TTGTCATTTCAGGCATCTCA+AGG + Chr1:5369246-5369265 None:intergenic 40.0%
! TTTGACTTTCGACAACTGTG+CGG + Chr1:5368995-5369014 None:intergenic 40.0%
! TTTGATGATCCTGGTCCATA+CGG - Chr1:5370841-5370860 MsG0180000391.01.T01:intron 40.0%
! TTTGGGAGAGGTTTCTGAAA+GGG - Chr1:5365771-5365790 MsG0180000391.01.T01:CDS 40.0%
!! AACGGAGTGTTGTTTACGTT+TGG - Chr1:5374556-5374575 MsG0180000391.01.T01:intron 40.0%
!! AACTCAGAAGGTTCTGGAAA+CGG - Chr1:5374616-5374635 MsG0180000391.01.T01:intron 40.0%
!! AAGTGTTGATGTGTCAAGTG+TGG - Chr1:5370310-5370329 MsG0180000391.01.T01:CDS 40.0%
!! AATTCCTTAAAGAGTGTCCC+GGG + Chr1:5368622-5368641 None:intergenic 40.0%
!! AGTGTTGATGTGTCAAGTGT+GGG - Chr1:5370311-5370330 MsG0180000391.01.T01:CDS 40.0%
!! ATGGTGTCCAAACCACTTTT+TGG - Chr1:5370408-5370427 MsG0180000391.01.T01:intron 40.0%
!! CCCAATTGCTGACTTAGTTA+AGG - Chr1:5368207-5368226 MsG0180000391.01.T01:intron 40.0%
!! CTTATGTAGTTCTAGCAACC+CGG + Chr1:5366380-5366399 None:intergenic 40.0%
!! GAATTCCTTAAAGAGTGTCC+CGG + Chr1:5368623-5368642 None:intergenic 40.0%
!! TCGTGGATGATGGAATAGTT+GGG - Chr1:5375115-5375134 MsG0180000391.01.T01:CDS 40.0%
!! TCTCCTCTCTAAAGTTCCAA+TGG - Chr1:5372543-5372562 MsG0180000391.01.T01:intron 40.0%
!! TGATTGGTTTGACAGCCATT+TGG - Chr1:5367503-5367522 MsG0180000391.01.T01:intron 40.0%
!! TGCCGTTGAAACTTTTGACT+TGG + Chr1:5374690-5374709 None:intergenic 40.0%
!!! AGTTTTAGGCGGTTTTGAGT+TGG - Chr1:5375161-5375180 MsG0180000391.01.T01:CDS 40.0%
!!! ATTTTAGAACTAGGAGCTGG+TGG + Chr1:5374435-5374454 None:intergenic 40.0%
!!! TGCATCTGTTGCTTTTGCTT+AGG - Chr1:5370587-5370606 MsG0180000391.01.T01:intron 40.0%
!!! TGGATGATCTGCACGTTTTT+TGG - Chr1:5366836-5366855 MsG0180000391.01.T01:intron 40.0%
!!! TGGTTGGTTTTACAGCCATT+TGG - Chr1:5367034-5367053 MsG0180000391.01.T01:intron 40.0%
AAATCGGAGCATAACTTGGG+TGG - Chr1:5371078-5371097 MsG0180000391.01.T01:intron 45.0%
AACCACAACTCAGAAGGTTC+TGG - Chr1:5374610-5374629 MsG0180000391.01.T01:intron 45.0%
ACTATAGCGCTGTAGCATAG+CGG - Chr1:5367715-5367734 MsG0180000391.01.T01:intron 45.0%
ACTGGGGCAAAAGCTATTTG+AGG + Chr1:5374797-5374816 None:intergenic 45.0%
ACTTCCATGTCTCTTCTTGG+AGG + Chr1:5366756-5366775 None:intergenic 45.0%
AGAGAGAGAGAGAGAAAGGA+AGG - Chr1:5374304-5374323 MsG0180000391.01.T01:intron 45.0%
AGAGCATGAGATACTAGACG+AGG - Chr1:5371676-5371695 MsG0180000391.01.T01:CDS 45.0%
ATCCGGAGACATGGTTATTC+CGG + Chr1:5373976-5373995 None:intergenic 45.0%
ATGACGAGTGTTATCAGTCG+CGG - Chr1:5366174-5366193 MsG0180000391.01.T01:intron 45.0%
ATGCGGTGTCTTCCACAATA+TGG + Chr1:5370962-5370981 None:intergenic 45.0%
ATGGTGATTGCCTCATTGGA+TGG - Chr1:5371396-5371415 MsG0180000391.01.T01:intron 45.0%
ATTGCAACATCCTCTCAGCA+AGG - Chr1:5369547-5369566 MsG0180000391.01.T01:intron 45.0%
ATTGCCTCTTGCACCTGTTT+GGG - Chr1:5365754-5365773 MsG0180000391.01.T01:CDS 45.0%
CATATCCCTCTCTACTCTAC+TGG + Chr1:5374815-5374834 None:intergenic 45.0%
CATCAACGAGGGGTGATTTA+GGG + Chr1:5374243-5374262 None:intergenic 45.0%
CCATGTTAACCATTCAAGCG+GGG - Chr1:5371044-5371063 MsG0180000391.01.T01:intron 45.0%
CGAGTCTCCTTGAAATGATG+GGG + Chr1:5369198-5369217 None:intergenic 45.0%
CGATAATCTATGGATGGTCG+TGG - Chr1:5375098-5375117 MsG0180000391.01.T01:intron 45.0%
CGGACAAGCTACAAAACTGT+AGG - Chr1:5367417-5367436 MsG0180000391.01.T01:intron 45.0%
CGGGTTGCTAGAACTACATA+AGG - Chr1:5366378-5366397 MsG0180000391.01.T01:intron 45.0%
CTAAAAGCTGCCAACCAAGT+CGG + Chr1:5368798-5368817 None:intergenic 45.0%
CTAGCATTCACCATCCAATG+AGG + Chr1:5371409-5371428 None:intergenic 45.0%
CTCAATATTCCAGCCCAACA+AGG + Chr1:5372613-5372632 None:intergenic 45.0%
CTGGGGCAAAAGCTATTTGA+GGG + Chr1:5374796-5374815 None:intergenic 45.0%
CTTGAGAGAGAGAGAGAGAA+AGG - Chr1:5374300-5374319 MsG0180000391.01.T01:intron 45.0%
CTTGTTCAGATTGCTGAGTG+GGG - Chr1:5370655-5370674 MsG0180000391.01.T01:intron 45.0%
GACACAGGCTACAAAGATGT+AGG - Chr1:5368294-5368313 MsG0180000391.01.T01:intron 45.0%
GAGCCCATATGGTGAAGATA+TGG - Chr1:5370389-5370408 MsG0180000391.01.T01:intron 45.0%
GAGGCAATGGTCCTTTAGTA+AGG + Chr1:5365742-5365761 None:intergenic 45.0%
GGATGGTGAATGCTAGATGA+TGG - Chr1:5371413-5371432 MsG0180000391.01.T01:intron 45.0%
GGCAAATCGGAGCATAACTT+GGG - Chr1:5371075-5371094 MsG0180000391.01.T01:intron 45.0%
GGTGTCTTCCACAATATGGA+CGG + Chr1:5370958-5370977 None:intergenic 45.0%
GTAGAGTAGAGAGGGATATG+TGG - Chr1:5374815-5374834 MsG0180000391.01.T01:intron 45.0%
GTCATTTCAGGCATCTCAAG+GGG + Chr1:5369244-5369263 None:intergenic 45.0%
GTTGTGGAGATGTGTCAGTT+AGG - Chr1:5375204-5375223 MsG0180000391.01.T01:CDS 45.0%
GTTTGGGAGAGGTTTCTGAA+AGG - Chr1:5365770-5365789 MsG0180000391.01.T01:CDS 45.0%
TAAAAGCTGCCAACCAAGTC+GGG + Chr1:5368797-5368816 None:intergenic 45.0%
TACAAGTGAGAGAGCCCATA+TGG - Chr1:5370378-5370397 MsG0180000391.01.T01:intron 45.0%
TACTACCCACTATACCTCCT+TGG - Chr1:5369685-5369704 MsG0180000391.01.T01:intron 45.0%
TATCCCTCTCTACTCTACTG+GGG + Chr1:5374813-5374832 None:intergenic 45.0%
TATCTGTTTGTAGAGGGTGG+GGG - Chr1:5366800-5366819 MsG0180000391.01.T01:intron 45.0%
TCAGAACCAGATGAGACTCT+AGG - Chr1:5368364-5368383 MsG0180000391.01.T01:intron 45.0%
TCCGACATTGGATGAAGATG+TGG - Chr1:5370341-5370360 MsG0180000391.01.T01:intron 45.0%
TCTCCTTCATCCATCAACGA+GGG + Chr1:5374254-5374273 None:intergenic 45.0%
TGATGGAATAGTTGGGTGGA+TGG - Chr1:5375122-5375141 MsG0180000391.01.T01:CDS 45.0%
TGCAGTTCTCTGTGTCATGA+GGG + Chr1:5370468-5370487 None:intergenic 45.0%
TGGAGATGTGTCAGTTAGGT+GGG - Chr1:5375208-5375227 MsG0180000391.01.T01:CDS 45.0%
TGGCAAATCGGAGCATAACT+TGG - Chr1:5371074-5371093 MsG0180000391.01.T01:intron 45.0%
TGGGGCAAAAGCTATTTGAG+GGG + Chr1:5374795-5374814 None:intergenic 45.0%
TTCAGAAACCTCTCCCAAAC+AGG + Chr1:5365770-5365789 None:intergenic 45.0%
TTCCAGAACCTTCTGAGTTG+TGG + Chr1:5374615-5374634 None:intergenic 45.0%
TTCTCCTTCATCCATCAACG+AGG + Chr1:5374255-5374274 None:intergenic 45.0%
TTGCAGTTCTCTGTGTCATG+AGG + Chr1:5370469-5370488 None:intergenic 45.0%
TTGCTGAGAGGATGTTGCAA+TGG + Chr1:5369548-5369567 None:intergenic 45.0%
! AACAAAGGTTCCAAGGCACT+AGG + Chr1:5371249-5371268 None:intergenic 45.0%
! ACGAGTTAGAGGGGTGATTT+TGG - Chr1:5374206-5374225 MsG0180000391.01.T01:intron 45.0%
! CATCGCATTTTGTGGCCAAA+TGG + Chr1:5367052-5367071 None:intergenic 45.0%
! CGAGTTAGAGGGGTGATTTT+GGG - Chr1:5374207-5374226 MsG0180000391.01.T01:intron 45.0%
! GAAATCCTTAAAGTGTCCCG+GGG + Chr1:5368006-5368025 None:intergenic 45.0%
! GCACGGCTTTTCGAAAGTTA+AGG + Chr1:5372007-5372026 None:intergenic 45.0%
! GCTCCATTGGAACTTTAGAG+AGG + Chr1:5372549-5372568 None:intergenic 45.0%
! GGTATAGGCTTTTAGTCTGG+CGG - Chr1:5373389-5373408 MsG0180000391.01.T01:intron 45.0%
! GTATAGGCTTTTAGTCTGGC+GGG - Chr1:5373390-5373409 MsG0180000391.01.T01:intron 45.0%
! GTTCTGTCACTTCCTAACCT+AGG - Chr1:5370018-5370037 MsG0180000391.01.T01:intron 45.0%
! TTGCTAGAGAGAGAAGCACA+AGG + Chr1:5369438-5369457 None:intergenic 45.0%
!! ACTCAGAAGGTTCTGGAAAC+GGG - Chr1:5374617-5374636 MsG0180000391.01.T01:intron 45.0%
!! ATTCCTTAAAGAGTGTCCCG+GGG + Chr1:5368621-5368640 None:intergenic 45.0%
!! GTCGTGGATGATGGAATAGT+TGG - Chr1:5375114-5375133 MsG0180000391.01.T01:CDS 45.0%
!! TCTTGGATGGTGGAGCAAAA+TGG + Chr1:5369725-5369744 None:intergenic 45.0%
!! TGGATGATGGAATAGTTGGG+TGG - Chr1:5375118-5375137 MsG0180000391.01.T01:CDS 45.0%
!!! TTTAGGCGGTTTTGAGTTGG+CGG - Chr1:5375164-5375183 MsG0180000391.01.T01:CDS 45.0%
!! ATTATCAAAATAATATTAAA+TGG - Chr1:5372703-5372722 MsG0180000391.01.T01:intron 5.0%
!!! AAAATTTCATTTAAATTTTA+AGG - Chr1:5372788-5372807 MsG0180000391.01.T01:intron 5.0%
!!! TTTATTAATTATTTTTGTTT+TGG - Chr1:5374851-5374870 MsG0180000391.01.T01:intron 5.0%
!!! TTTTATTATATATATAAACT+AGG + Chr1:5371855-5371874 None:intergenic 5.0%
AAAAGCTGCCAACCAAGTCG+GGG + Chr1:5368796-5368815 None:intergenic 50.0%
AAATGCTAACAAGTGCCCCC+GGG + Chr1:5368748-5368767 None:intergenic 50.0%
AACAGAGGTCTGCACAGAGA+TGG + Chr1:5369468-5369487 None:intergenic 50.0%
AGACTGTCGACCAATCCAAG+AGG + Chr1:5371707-5371726 None:intergenic 50.0%
AGCTCTGCAGCAAGAAACAG+AGG + Chr1:5369483-5369502 None:intergenic 50.0%
AGGACGCTACAACCCAAACA+TGG - Chr1:5370867-5370886 MsG0180000391.01.T01:intron 50.0%
AGGGAGAAGATTAGGCAGCA+TGG - Chr1:5367437-5367456 MsG0180000391.01.T01:intron 50.0%
AGTCTACCGTGATGATCCCT+GGG - Chr1:5370439-5370458 MsG0180000391.01.T01:intron 50.0%
AGTCTAGTGCTAAAACCGCG+AGG + Chr1:5369339-5369358 None:intergenic 50.0%
ATATGGAGAACTCCCCGACT+TGG - Chr1:5368781-5368800 MsG0180000391.01.T01:intron 50.0%
ATCTGTTTGTAGAGGGTGGG+GGG - Chr1:5366801-5366820 MsG0180000391.01.T01:intron 50.0%
CAAACAGGTGCAAGAGGCAA+TGG + Chr1:5365755-5365774 None:intergenic 50.0%
CAAGCTTGCCGTCCATATTG+TGG - Chr1:5370947-5370966 MsG0180000391.01.T01:intron 50.0%
CACCGGAATAACCATGTCTC+CGG - Chr1:5373971-5373990 MsG0180000391.01.T01:intron 50.0%
CATTGCCTCTTGCACCTGTT+TGG - Chr1:5365753-5365772 MsG0180000391.01.T01:CDS 50.0%
CCATCAACGAGGGGTGATTT+AGG + Chr1:5374244-5374263 None:intergenic 50.0%
CCCCGCTTGAATGGTTAACA+TGG + Chr1:5371047-5371066 None:intergenic 50.0%
CCTAAATCACCCCTCGTTGA+TGG - Chr1:5374241-5374260 MsG0180000391.01.T01:intron 50.0%
CTATGGATGGTCGTGGATGA+TGG - Chr1:5375105-5375124 MsG0180000391.01.T01:CDS 50.0%
CTCCTTCATCCATCAACGAG+GGG + Chr1:5374253-5374272 None:intergenic 50.0%
GAAATGCTAACAAGTGCCCC+CGG + Chr1:5368749-5368768 None:intergenic 50.0%
GACACGATTTGCAGCATCTG+TGG + Chr1:5369362-5369381 None:intergenic 50.0%
GAGGGCTTCCTGTTTGATGT+AGG + Chr1:5368856-5368875 None:intergenic 50.0%
GCAGTTCTCTGTGTCATGAG+GGG + Chr1:5370467-5370486 None:intergenic 50.0%
GCTATGCTACAGCGCTATAG+TGG + Chr1:5367716-5367735 None:intergenic 50.0%
GCTTCCTCCAAGAAGAGACA+TGG - Chr1:5366749-5366768 MsG0180000391.01.T01:intron 50.0%
GGAGATGTGTCAGTTAGGTG+GGG - Chr1:5375209-5375228 MsG0180000391.01.T01:CDS 50.0%
GGAGCATAACTTGGGTGGAT+TGG - Chr1:5371083-5371102 MsG0180000391.01.T01:intron 50.0%
GGATGAAACTGACCACGATG+AGG + Chr1:5369527-5369546 None:intergenic 50.0%
GTGGAGATGTGTCAGTTAGG+TGG - Chr1:5375207-5375226 MsG0180000391.01.T01:CDS 50.0%
TAGTCTACCGTGATGATCCC+TGG - Chr1:5370438-5370457 MsG0180000391.01.T01:intron 50.0%
TCAGCTAAAAGCTGCCGACA+GGG + Chr1:5368136-5368155 None:intergenic 50.0%
TGACTAGAGGGGCCATGTTT+GGG + Chr1:5370882-5370901 None:intergenic 50.0%
TGCTCGTCGACATAACAAGC+CGG + Chr1:5371013-5371032 None:intergenic 50.0%
TGGCATGGTGATTGCCTCAT+TGG - Chr1:5371392-5371411 MsG0180000391.01.T01:intron 50.0%
TTAACGCAACCTTGTTGGGC+TGG - Chr1:5372601-5372620 MsG0180000391.01.T01:intron 50.0%
TTCAGATTGCTGAGTGGGGA+AGG - Chr1:5370659-5370678 MsG0180000391.01.T01:intron 50.0%
TTGACTAGAGGGGCCATGTT+TGG + Chr1:5370883-5370902 None:intergenic 50.0%
TTGCCCCAGTAGAGTAGAGA+GGG - Chr1:5374807-5374826 MsG0180000391.01.T01:intron 50.0%
TTGTAGCGTCCTCTTCCGTA+TGG + Chr1:5370859-5370878 None:intergenic 50.0%
TTTGCCCCAGTAGAGTAGAG+AGG - Chr1:5374806-5374825 MsG0180000391.01.T01:intron 50.0%
! GAGAGAAGCACAAGGTTGAG+AGG + Chr1:5369430-5369449 None:intergenic 50.0%
! GTCGGTGCATTTGATGATCC+TGG - Chr1:5370832-5370851 MsG0180000391.01.T01:intron 50.0%
! TCTGGCGGGTGCATGATATA+GGG - Chr1:5373404-5373423 MsG0180000391.01.T01:intron 50.0%
! TGCACCGACGAAGCTGAATT+TGG + Chr1:5370821-5370840 None:intergenic 50.0%
!! ACTTGGAGGAAGACTTGCTG+AGG - Chr1:5375272-5375291 MsG0180000391.01.T01:CDS 50.0%
!! ACTTGGGTGGATTGGTCTAG+AGG - Chr1:5371091-5371110 MsG0180000391.01.T01:intron 50.0%
!! CTTGGAGGAAGACTTGCTGA+GGG - Chr1:5375273-5375292 MsG0180000391.01.T01:CDS 50.0%
!! GCTGAGGGAGTGTTGTTCTT+TGG - Chr1:5375288-5375307 MsG0180000391.01.T01:CDS 50.0%
!! GTGGGTTAGAAGTCCGACAT+TGG - Chr1:5370329-5370348 MsG0180000391.01.T01:intron 50.0%
AATGCTAACAAGTGCCCCCG+GGG + Chr1:5368747-5368766 None:intergenic 55.0%
ACGTTGCAGATCCGGAGACA+TGG + Chr1:5373985-5374004 None:intergenic 55.0%
AGCGACGTTTGCACACTTGG+AGG - Chr1:5375258-5375277 MsG0180000391.01.T01:CDS 55.0%
CAACACACTCCCCGCTTGAA+TGG + Chr1:5371056-5371075 None:intergenic 55.0%
CGAGGTTGTGCCTCTTGGAT+TGG - Chr1:5371694-5371713 MsG0180000391.01.T01:intron 55.0%
CTAGACGAGGTTGTGCCTCT+TGG - Chr1:5371689-5371708 MsG0180000391.01.T01:intron 55.0%
CTCAGCTAAAAGCTGCCGAC+AGG + Chr1:5368137-5368156 None:intergenic 55.0%
CTCTCCCAAACAGGTGCAAG+AGG + Chr1:5365761-5365780 None:intergenic 55.0%
CTCTTGCACCTGTTTGGGAG+AGG - Chr1:5365759-5365778 MsG0180000391.01.T01:CDS 55.0%
GATCCTGGTCCATACGGAAG+AGG - Chr1:5370847-5370866 MsG0180000391.01.T01:intron 55.0%
GCGTCATCACGTTGCAGATC+CGG + Chr1:5373993-5374012 None:intergenic 55.0%
GGGGGCTTCCTGTTTGATGT+AGG + Chr1:5368190-5368209 None:intergenic 55.0%
GGTCTTGCTAATGAGTGCCC+CGG - Chr1:5368601-5368620 MsG0180000391.01.T01:intron 55.0%
GTCTTGCTAATGAGTGCCCC+GGG - Chr1:5368602-5368621 MsG0180000391.01.T01:intron 55.0%
GTGGGGGGTAACAGCCTAAA+TGG - Chr1:5366816-5366835 MsG0180000391.01.T01:intron 55.0%
GTTTCTTGCTGCAGAGCTGC+TGG - Chr1:5369485-5369504 MsG0180000391.01.T01:intron 55.0%
TGGGAGATGCTAACGAGTGC+CGG + Chr1:5368091-5368110 None:intergenic 55.0%
TGTGTCAGTTAGGTGGGGTG+AGG - Chr1:5375214-5375233 MsG0180000391.01.T01:CDS 55.0%
TGTGTCATGAGGGGAACCCA+GGG + Chr1:5370458-5370477 None:intergenic 55.0%
TTCGGATTTGGCCGCGAGTT+AGG - Chr1:5366902-5366921 MsG0180000391.01.T01:intron 55.0%
! CACCCCTCGTTGATGGATGA+AGG - Chr1:5374248-5374267 MsG0180000391.01.T01:intron 55.0%
! CATTCAAGCGGGGAGTGTGT+TGG - Chr1:5371054-5371073 MsG0180000391.01.T01:intron 55.0%
! CGGGGAGTGTGTTGGCAAAT+CGG - Chr1:5371062-5371081 MsG0180000391.01.T01:intron 55.0%
! GTCTGGCGGGTGCATGATAT+AGG - Chr1:5373403-5373422 MsG0180000391.01.T01:intron 55.0%
! TGACTTGGATGTGGGGACCA+CGG + Chr1:5374675-5374694 None:intergenic 55.0%
!! AAGGCCCTTAAAGAGTGCCC+CGG - Chr1:5368727-5368746 MsG0180000391.01.T01:intron 55.0%
!! GGGTGGATTGGTCTAGAGGT+GGG - Chr1:5371095-5371114 MsG0180000391.01.T01:intron 55.0%
!! GGTGGATTGGTCTAGAGGTG+GGG - Chr1:5371096-5371115 MsG0180000391.01.T01:intron 55.0%
!! TGGGTGGATTGGTCTAGAGG+TGG - Chr1:5371094-5371113 MsG0180000391.01.T01:intron 55.0%
!! TTCCCATTGAAGAGTGCCCC+CGG - Chr1:5368069-5368088 MsG0180000391.01.T01:intron 55.0%
!!! CCTCCTTGGCATTTTGGGGT+CGG - Chr1:5369699-5369718 MsG0180000391.01.T01:intron 55.0%
CCGACCCCAAAATGCCAAGG+AGG + Chr1:5369702-5369721 None:intergenic 60.0%
CGCAGCGACGTTTGCACACT+TGG - Chr1:5375255-5375274 MsG0180000391.01.T01:CDS 60.0%
CGTCCTCTTCCGTATGGACC+AGG + Chr1:5370853-5370872 None:intergenic 60.0%
CTGTGTCATGAGGGGAACCC+AGG + Chr1:5370459-5370478 None:intergenic 60.0%
GAGTGCCCCGGGACACTTTA+AGG - Chr1:5367998-5368017 MsG0180000391.01.T01:intron 60.0%
GGCGGGTGCATGATATAGGG+TGG - Chr1:5373407-5373426 MsG0180000391.01.T01:intron 60.0%
GGGAGATGCTAACGAGTGCC+GGG + Chr1:5368090-5368109 None:intergenic 60.0%
GGGGAACCCAGGGATCATCA+CGG + Chr1:5370448-5370467 None:intergenic 60.0%
GGGGCCCATCCAGCTACATT+TGG - Chr1:5371115-5371134 MsG0180000391.01.T01:intron 60.0%
GGTCTTGCTAACGAGTGCCC+CGG - Chr1:5367986-5368005 MsG0180000391.01.T01:intron 60.0%
GTCTTGCTAACGAGTGCCCC+GGG - Chr1:5367987-5368006 MsG0180000391.01.T01:intron 60.0%
GTGCCCCGGGACACTCTTTA+AGG - Chr1:5368615-5368634 MsG0180000391.01.T01:intron 60.0%
TGGATGTGGGGACCACGGAA+TGG + Chr1:5374670-5374689 None:intergenic 60.0%
TGGCCGACCCCAAAATGCCA+AGG + Chr1:5369705-5369724 None:intergenic 60.0%
! GGAGATGCTAACGAGTGCCG+GGG + Chr1:5368089-5368108 None:intergenic 60.0%
!! AGGCCCTTAAAGAGTGCCCC+GGG - Chr1:5368728-5368747 MsG0180000391.01.T01:intron 60.0%
!! GAGATGCTAACGAGTGCCGG+GGG + Chr1:5368088-5368107 None:intergenic 60.0%
!! GGAGAACTCCCCGACTTGGT+TGG - Chr1:5368785-5368804 MsG0180000391.01.T01:intron 60.0%
!! TGCCGGGGGCACTCTTCAAT+GGG + Chr1:5368074-5368093 None:intergenic 60.0%
! GCCCCCGGGGCACTCTTTAA+GGG + Chr1:5368734-5368753 None:intergenic 65.0%
! TGCCCCCGGGGCACTCTTTA+AGG + Chr1:5368735-5368754 None:intergenic 65.0%
!! GCCCTTAAAGAGTGCCCCGG+GGG - Chr1:5368730-5368749 MsG0180000391.01.T01:intron 65.0%
!! GGCCCTTAAAGAGTGCCCCG+GGG - Chr1:5368729-5368748 MsG0180000391.01.T01:intron 65.0%
!! GTGCCGGGGGCACTCTTCAA+TGG + Chr1:5368075-5368094 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
Chr1 gene 5365647 5375350 5365647 ID=MsG0180000391.01;Name=MsG0180000391.01
Chr1 mRNA 5365647 5375350 5365647 ID=MsG0180000391.01.T01;Parent=MsG0180000391.01;Name=MsG0180000391.01.T01;_AED=0.50;_eAED=0.71;_QI=0|0|0|1|1|1|4|0|293
Chr1 exon 5375105 5375350 5375105 ID=MsG0180000391.01.T01:exon:2746;Parent=MsG0180000391.01.T01
Chr1 exon 5371613 5371696 5371613 ID=MsG0180000391.01.T01:exon:2747;Parent=MsG0180000391.01.T01
Chr1 exon 5370066 5370333 5370066 ID=MsG0180000391.01.T01:exon:2748;Parent=MsG0180000391.01.T01
Chr1 exon 5365647 5365930 5365647 ID=MsG0180000391.01.T01:exon:2749;Parent=MsG0180000391.01.T01
Chr1 CDS 5375105 5375350 5375105 ID=MsG0180000391.01.T01:cds;Parent=MsG0180000391.01.T01
Chr1 CDS 5371613 5371696 5371613 ID=MsG0180000391.01.T01:cds;Parent=MsG0180000391.01.T01
Chr1 CDS 5370066 5370333 5370066 ID=MsG0180000391.01.T01:cds;Parent=MsG0180000391.01.T01
Chr1 CDS 5365647 5365930 5365647 ID=MsG0180000391.01.T01:cds;Parent=MsG0180000391.01.T01
Gene Sequence

>MsG0180000391.01.T01

ATGAGTGATAAAGAACTTCTTTGGAGAGCTTCTTTGGTTCCTAAGATTAAGAATTACCCTTTTGAAAGAGTTCCTAAGATTGCTTTTATGTTCCTTACTAAAGGACCATTGCCTCTTGCACCTGTTTGGGAGAGGTTTCTGAAAGGGCATGAGAGTCGTTATAGTGTGTATGTTCATCCAACTCCTTCTTATCAAGCCAAGTTTCCTCCTTCATCTGTTTTTTATAAGAGACAAATCCCTAGTCAGCTAAATGATAAGTTCCATAGTGCATTAAACATTAACCTCGCGGTTTTAGCACTAGACTCCACAGATGCTGCAAATCGTGTCTTAATTGCTGAGTGGGGAAGGATGAGCATGTGCGACGCCGAAAGAAGACTACTTGCTAATGCATTACTTGACATCTCCAATGAGCGGTTTATTCTATTGTCCGAATCATGTATCCCTCTCTACAAATTCAGTCTAGTCTACAACTATTTAATGAAATCCAAATTCAGCTTCGTCGGTGCATTTGATGATCCTGGTCCATACGGAAGAGGACGCTACAACCCAAACATGGCCCCTCTAGTCAACGTTACAAAATGGCGTAAAGGCTCTCAATGGATAGATTTAGGGGTTGAGAGTTGGTTTGACGATAATCTATGGATGGTCGTGGATGATGGAATAGTTGGGTGGATGGTGTACCTTTTTGTGTTAGTTTTAGGCGGTTTTGAGTTGGCGGAGACTAAAGTGTTGATTGTTGTGGAGATGTGTCAGTTAGGTGGGGTGAGGTTAGATATGCTTGAAAGTCGCAGCGACGTTTGCACACTTGGAGGAAGACTTGCTGAGGGAGTGTTGTTCTTTGGTTCACAATGTTGTTTTCAGGTTAATGTTGAGGACATATGA

Protein sequence

>MsG0180000391.01.T01

MSDKELLWRASLVPKIKNYPFERVPKIAFMFLTKGPLPLAPVWERFLKGHESRYSVYVHPTPSYQAKFPPSSVFYKRQIPSQLNDKFHSALNINLAVLALDSTDAANRVLIAEWGRMSMCDAERRLLANALLDISNERFILLSESCIPLYKFSLVYNYLMKSKFSFVGAFDDPGPYGRGRYNPNMAPLVNVTKWRKGSQWIDLGVESWFDDNLWMVVDDGIVGWMVYLFVLVLGGFELAETKVLIVVEMCQLGGVRLDMLESRSDVCTLGGRLAEGVLFFGSQCCFQVNVEDI*